Miyakogusa Predicted Gene

Lj0g3v0146819.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146819.2 tr|Q6X9T2|Q6X9T2_HORVD SNAP25-like protein C
(Fragment) OS=Hordeum vulgare var. distichum PE=4
SV=1,49.52,0.000000000000002,SNARE,Target SNARE coiled-coil domain;
SUBFAMILY NOT NAMED,NULL; SYNAPTOSOMAL ASSOCIATED
PROTEIN,NUL,CUFF.8965.2
         (302 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g023720.1 | soluble N-ethylmaleimide-sensitive factor adap...   427   e-120
Medtr4g109310.1 | soluble N-ethylmaleimide-sensitive factor adap...   357   9e-99
Medtr3g023720.2 | soluble N-ethylmaleimide-sensitive factor adap...   328   3e-90
Medtr8g021950.1 | soluble N-ethylmaleimide-sensitive factor adap...   283   1e-76
Medtr5g043850.1 | soluble N-ethylmaleimide-sensitive factor adap...   249   2e-66

>Medtr3g023720.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr3:7218102-7214079 | 20130731
          Length = 296

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/304 (72%), Positives = 247/304 (81%), Gaps = 14/304 (4%)

Query: 1   MVGSKKSPLKYAKPSSVDPVSKHKNPFDSDEETKDNKKHVSG------HGLVSRESNTNP 54
           M+GSKKSPLK AKP S     KH NPFDSDEE KDN+K++S       + LV R++NTNP
Sbjct: 1   MLGSKKSPLKDAKPRS-----KH-NPFDSDEEKKDNRKNISSKKNSSQYNLVQRDTNTNP 54

Query: 55  FDDDYXXXXXXXXXXXXXXXNNPNRYKNGFRDSGGLESQSVQELENYAVYKSEETTKSVN 114
           FDD                  N N YKN FRDSGGL+SQSV++LE YAVYK+EETTKSVN
Sbjct: 55  FDD-VDARGHSSSSSYAPSYGNRNMYKNDFRDSGGLQSQSVEDLEEYAVYKAEETTKSVN 113

Query: 115 NCLKIAEEIREDATNTLVMLHQQGEQITRSHDVAADIDHDLSRGEKLLGSLGGMFSRTWK 174
           NC KIAEE+REDAT TLVMLH QGEQITRSHD+AA IDH+LSRGEKLLGSLGG+FS+TWK
Sbjct: 114 NCRKIAEEMREDATKTLVMLHHQGEQITRSHDIAAGIDHNLSRGEKLLGSLGGIFSKTWK 173

Query: 175 PKKTGTITGPVIFGADPVRRNGNHSEQREKLGLTSSAPKGQSKPRKSLSEPTNAFEKVEV 234
           PKKTGTITGP IFG DPVR++ NH EQREKLGL +SAPKGQSKPRK+LSEPTNAFE+VEV
Sbjct: 174 PKKTGTITGPTIFGDDPVRKSANHLEQREKLGL-NSAPKGQSKPRKALSEPTNAFERVEV 232

Query: 235 EKGKQDDALSDISDLLGELKGMAMDMGSEIDRHINAMDGFDKDVEKLSIRMNGANQRGRH 294
           EK KQDDALSDISDLLGELKGMAMDMG+EI+R   A+DGF+KD EKL+IRMNGANQR  H
Sbjct: 233 EKEKQDDALSDISDLLGELKGMAMDMGTEIERQTKAIDGFEKDTEKLNIRMNGANQRTLH 292

Query: 295 LLGK 298
           LL K
Sbjct: 293 LLRK 296


>Medtr4g109310.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr4:45393006-45391267 | 20130731
          Length = 300

 Score =  357 bits (915), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 194/305 (63%), Positives = 221/305 (72%), Gaps = 12/305 (3%)

Query: 1   MVGSKKSPLKYAKPSSVDPVSKHKNPFDSDEETKDNKKHVSG-------HGLVSRESNTN 53
           M  SK SP+K      V+ V    NPFDSD+E  D++K  S          LV+ E NTN
Sbjct: 1   MFNSKNSPVKVG---PVNDVKSWSNPFDSDDEENDSRKTSSSKKTSSSERALVTLEVNTN 57

Query: 54  PFDDDYXXXXXXXXXXXXXXXNNPNRYKNGFRDSGGLESQSVQELENYAVYKSEETTKSV 113
           PFDD                  + NRYKN FRDSGG+E+QS+QELENYAVYK+EETTKSV
Sbjct: 58  PFDD-VDDGKKTPSSTYAHRSADRNRYKNHFRDSGGVENQSMQELENYAVYKAEETTKSV 116

Query: 114 NNCLKIAEEIREDATNTLVMLHQQGEQITRSHDVAADIDHDLSRGEKLLGSLGGMFSRTW 173
           +NCLKIAE IREDA  TLV LH QGEQITRSH VA DID DLSRGEKLLGSLGG+FS+TW
Sbjct: 117 HNCLKIAENIREDAAKTLVTLHHQGEQITRSHHVATDIDRDLSRGEKLLGSLGGLFSKTW 176

Query: 174 KPKKTGTITGPVIFGADPVRRNGNHSEQREKLGLTSSAPKGQSKPRKSLSEPTNAFEKVE 233
           KPKKT TITGPVIFG D VRR GNH EQREKLGLT SA +GQS+ R    EPT+A  KVE
Sbjct: 177 KPKKTRTITGPVIFGDDAVRRKGNHLEQREKLGLT-SASEGQSRLRTPPQEPTDALTKVE 235

Query: 234 VEKGKQDDALSDISDLLGELKGMAMDMGSEIDRHINAMDGFDKDVEKLSIRMNGANQRGR 293
            EKGKQDDALS++SDLLGELK MA+DMGSEI+RH  A+   D DV++L+ R+ GANQR R
Sbjct: 236 FEKGKQDDALSNLSDLLGELKDMAVDMGSEIERHNKALGHLDDDVDELNFRVKGANQRAR 295

Query: 294 HLLGK 298
            L+GK
Sbjct: 296 RLMGK 300


>Medtr3g023720.2 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr3:7218060-7214990 | 20130731
          Length = 260

 Score =  328 bits (841), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 177/270 (65%), Positives = 202/270 (74%), Gaps = 19/270 (7%)

Query: 1   MVGSKKSPLKYAKPSSVDPVSKHKNPFDSDEETKDNKKHVSG------HGLVSRESNTNP 54
           M+GSKKSPLK AKP S     KH NPFDSDEE KDN+K++S       + LV R++NTNP
Sbjct: 1   MLGSKKSPLKDAKPRS-----KH-NPFDSDEEKKDNRKNISSKKNSSQYNLVQRDTNTNP 54

Query: 55  FDDDYXXXXXXXXXXXXXXXNNPNRYKNGFRDSGGLESQSVQELENYAVYKSEETTKSVN 114
           FDD                  N N YKN FRDSGGL+SQSV++LE YAVYK+EETTKSVN
Sbjct: 55  FDD-VDARGHSSSSSYAPSYGNRNMYKNDFRDSGGLQSQSVEDLEEYAVYKAEETTKSVN 113

Query: 115 NCLKIAEEIREDATNTLVMLHQQGEQITRSHDVAADIDHDLSRGEKLLGSLGGMFSRTWK 174
           NC KIAEE+REDAT TLVMLH QGEQITRSHD+AA IDH+LSRGEKLLGSLGG+FS+TWK
Sbjct: 114 NCRKIAEEMREDATKTLVMLHHQGEQITRSHDIAAGIDHNLSRGEKLLGSLGGIFSKTWK 173

Query: 175 PKKTGTITGPVIFGADPVRRNGNHSEQREKLGLTSSAPKGQSKPRKSLSEPTNAFEKVEV 234
           PKKTGTITGP IFG DPVR++ NH EQREKLGL +SAPKGQSKPRK+LSEPTNAFE+VEV
Sbjct: 174 PKKTGTITGPTIFGDDPVRKSANHLEQREKLGL-NSAPKGQSKPRKALSEPTNAFERVEV 232

Query: 235 EKGKQDDALSDISDLLGELKGMAMDMGSEI 264
                 + L  IS L   ++    D  S+I
Sbjct: 233 R-----NNLVKISMLFRIIRSTEHDKSSQI 257


>Medtr8g021950.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr8:7766732-7768791 | 20130731
          Length = 227

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/214 (67%), Positives = 169/214 (78%), Gaps = 1/214 (0%)

Query: 84  FRDSGGLESQSVQELENYAVYKSEETTKSVNNCLKIAEEIREDATNTLVMLHQQGEQITR 143
            R+SGG E+ SVQELE+YAV+K+EETTKSV NCLKIAE IRE+AT T V LH QGEQITR
Sbjct: 14  LRESGGSENDSVQELEDYAVHKAEETTKSVQNCLKIAENIRENATKTFVTLHHQGEQITR 73

Query: 144 SHDVAADIDHDLSRGEKLLGSLGGMFSRTWKPKKTGTITGPVIFGADPVRRNGNHSEQRE 203
           +H VAADID  LSRGEKLL SLGG+FS+TWKPKKT  ITGPVIFG D VRR  +H +QRE
Sbjct: 74  THHVAADIDGHLSRGEKLLRSLGGLFSKTWKPKKTRKITGPVIFGDDAVRRKVSHLKQRE 133

Query: 204 KLGLTSSAPKGQSKPRKSLSEPTNAFEKVEVEKGKQDDALSDISDLLGELKGMAMDMGSE 263
           KLGL  SA KGQS+ R    EPT A EKVE EKG QDDALS++SDLLGE+K MA+ MGSE
Sbjct: 134 KLGL-PSASKGQSRLRTPPQEPTVALEKVEFEKGNQDDALSNLSDLLGEVKDMAVHMGSE 192

Query: 264 IDRHINAMDGFDKDVEKLSIRMNGANQRGRHLLG 297
           I+R   A+  F+ DV++L+ R+ GAN+R   LLG
Sbjct: 193 IERQNKALSHFEDDVDELNFRLKGANRRANRLLG 226


>Medtr5g043850.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr5:19257687-19255958 | 20130731
          Length = 271

 Score =  249 bits (637), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/211 (59%), Positives = 158/211 (74%), Gaps = 1/211 (0%)

Query: 88  GGLESQSVQELENYAVYKSEETTKSVNNCLKIAEEIREDATNTLVMLHQQGEQITRSHDV 147
           GGLE+QSVQELENYAV K+EETT SVNNCL+IAE+IR DAT TL MLHQQG+QITR+H++
Sbjct: 62  GGLENQSVQELENYAVNKAEETTNSVNNCLRIAEDIRSDATRTLDMLHQQGDQITRTHNM 121

Query: 148 AADIDHDLSRGEKLLGSLGGMFSRTWKPKKTGTITGPVIFGADPVRRNGNHSEQREKLGL 207
             D + DLSRGEKLL +LGGMFS+ WKPKK   ITGPVI      +++    E R KLGL
Sbjct: 122 VVDTEKDLSRGEKLLNNLGGMFSKPWKPKKGKAITGPVITSDHTSKKDVMSKEDRAKLGL 181

Query: 208 TSSAPKGQSKPRKSLSEPTNAFEKVEVEKGKQDDALSDISDLLGELKGMAMDMGSEIDRH 267
            +  PKG+S P    +E  NA++K++ EK KQDD LS++SD+LG+LKGMA+ MG+E+D  
Sbjct: 182 -APLPKGRSAPTTPPNESDNAYQKIDYEKAKQDDGLSELSDILGDLKGMAISMGTELDSQ 240

Query: 268 INAMDGFDKDVEKLSIRMNGANQRGRHLLGK 298
             A+D    DV++L+ RM GANQR R L+ K
Sbjct: 241 NKALDHLGDDVDELNNRMKGANQRARKLVAK 271