Miyakogusa Predicted Gene
- Lj0g3v0146809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0146809.1 Non Characterized Hit- tr|I1KWC9|I1KWC9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,33.48,1e-18,U1-like
zinc finger,Zinc finger, U1-type; zinc finger,Zinc finger, C2H2-like;
zf-met,NULL; ZINC FING,CUFF.8957.1
(388 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g023750.1 | C2H2 type zf-met: zinc-finger protein | HC | c... 417 e-116
Medtr5g097950.1 | C2H2 type zinc-finger protein | LC | chr5:4289... 233 2e-61
Medtr5g097950.2 | C2H2 type zinc-finger protein | LC | chr5:4289... 233 3e-61
>Medtr3g023750.1 | C2H2 type zf-met: zinc-finger protein | HC |
chr3:7230508-7224689 | 20130731
Length = 393
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/400 (55%), Positives = 273/400 (68%), Gaps = 55/400 (13%)
Query: 4 QQQQHHLVPVTNLQQPYYSANPYLIPYPHTSDSAIHPPGTDPPGNSTSLSVP----DAQT 59
QQQQH QPYYS+ P D ++HPPGTDP NSTS + P +Q
Sbjct: 20 QQQQH---------QPYYSSFP---------DPSLHPPGTDPLANSTSFAPPVSIYTSQP 61
Query: 60 TDSQYWVV--AEPIRYDLASGSSHVTPVASASLPYAWNGAWSHQVFTNDATVVLPHKTKV 117
TD Q W+V +EPIRYDLA GSSH A ASLP WNG W Q++ N+ T +LP++TKV
Sbjct: 62 TDYQNWIVPQSEPIRYDLAVGSSHEASAAPASLPSVWNGTWPPQIYGNETTTMLPNQTKV 121
Query: 118 TKAMQCEVCKIDCNTADVYEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTSGIQG 177
T A++CEVCK+D N+ D Y+ HI GKKHKKNLQ+ NPT A SHANVQ+ TS IQG
Sbjct: 122 TIALRCEVCKVDVNSKDSYDSHIAGKKHKKNLQIQTNPTIA-----SHANVQTDTSSIQG 176
Query: 178 QVQVGAEGEELESKKRKDLSGGTPMDSVKICTVCNVMCNSEDTYSKHLAGKRHTAQVGLM 237
Q +G ++ E KK+ +DS +C+ CNV+C S+D Y KHLAG++H AQV LM
Sbjct: 177 QALIGPVAKQSEPKKQ--------VDSATVCSTCNVLCTSQDAYIKHLAGRKHAAQVALM 228
Query: 238 NNNGIGPSVAAFKR------RKAPKKIQVAQSAWCEVCKITCDTKDMYIIHLSGKKHLKN 291
+NNGIGPS+A FKR +KA KKI+VAQS WCEVCKI C+++D+YI HL+GKKHLK
Sbjct: 229 SNNGIGPSIAEFKRNGVGPFQKAAKKIKVAQSVWCEVCKINCNSRDIYITHLAGKKHLKT 288
Query: 292 LEKLSKPETGVGASA---------APANPIIGPLEKPGSD--KPRKAPEMDIETKKRKIV 340
LEK S P+ VG S AP N +IGP EKPG+D KP+KA E+DIETKKRK+V
Sbjct: 289 LEKQSNPKIDVGTSGTSTATTTAIAP-NTLIGPQEKPGTDQPKPKKASELDIETKKRKVV 347
Query: 341 EGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKK 380
EGGAA +++C LCNVVCNS+ VFN HLVG KHAAMVKK
Sbjct: 348 EGGAAVDGIKMCTLCNVVCNSQTVFNFHLVGQKHAAMVKK 387
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 38/189 (20%)
Query: 208 CTVCNVMCNSEDTYSKHLAGKRHTAQVGLMNNNGIGPS---------------VAAFKRR 252
C VC V NS+D+Y H+AGK+H + + N I + ++
Sbjct: 127 CEVCKVDVNSKDSYDSHIAGKKHKKNLQIQTNPTIASHANVQTDTSSIQGQALIGPVAKQ 186
Query: 253 KAPKKIQVAQSAWCEVCKITCDTKDMYIIHLSGKKHLKNLEKLSKPETGVGASAAPANPI 312
PKK QV + C C + C ++D YI HL+G+KH + +S G+G P
Sbjct: 187 SEPKK-QVDSATVCSTCNVLCTSQDAYIKHLAGRKHAAQVALMS--NNGIG-------PS 236
Query: 313 IGPLEKPGSDKPRKAPEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGH 372
I ++ G +KA KK K+ + C++C + CNS ++ THL G
Sbjct: 237 IAEFKRNGVGPFQKA------AKKIKVAQS-------VWCEVCKINCNSRDIYITHLAGK 283
Query: 373 KHAAMVKKK 381
KH ++K+
Sbjct: 284 KHLKTLEKQ 292
>Medtr5g097950.1 | C2H2 type zinc-finger protein | LC |
chr5:42895876-42891635 | 20130731
Length = 532
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 155/226 (68%), Gaps = 20/226 (8%)
Query: 167 NVQSSTSGIQGQVQVGAEGEELESKKRKDLSGGTPMDSVKICTVCNVMCNSEDTYSKHLA 226
NVQ+ TSGIQGQ +G E E KK+ +DSVK+C+ CNV+C +DTY+KH+A
Sbjct: 309 NVQTDTSGIQGQALIGPVAEHSEPKKQ--------VDSVKVCSTCNVVCVGQDTYNKHVA 360
Query: 227 GKRHTAQVGLMNNNGIGPSVAAFKRR------KAPKKIQVAQSAWCEVCKITCDTKDMYI 280
G++H A+V L +N+GIGPS+A KR+ KA KKI+VA+S WCE CKI C+++D Y
Sbjct: 361 GRKHAAKVALKSNDGIGPSIAELKRKGDAPIEKAAKKIKVAESVWCEFCKINCNSRDSYT 420
Query: 281 IHLSGKKHLKNLEKLSKPETGVGASAAPANPIIGPL----EKPGSD--KPRKAPEMDIET 334
H+SGKKHL+NLEKLS P+ GVG+ A P + EKP SD K ++ PE+DIE
Sbjct: 421 AHISGKKHLRNLEKLSNPKVGVGSGATPTTTATITIIETQEKPDSDNLKAKQVPELDIEA 480
Query: 335 KKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKK 380
+KRK VE GAA +++C LCNVVCNS+ NTHL H HAAMVKK
Sbjct: 481 EKRKAVERGAAVNDIKMCTLCNVVCNSQANLNTHLSDHNHAAMVKK 526
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 156/340 (45%), Gaps = 75/340 (22%)
Query: 76 ASGSSHVTPVASASLPYAWNGAWSHQVFTNDATVVLPHKTKVTKAMQCEVCKIDCNTADV 135
A GSSH T ASLP A NG+W Q++ N+ ++LP++TKV KA +CEVC+I+ N+
Sbjct: 73 AVGSSHQTSAVPASLPSAHNGSWQLQIYGNETKIMLPNQTKVIKAFRCEVCEIEVNSQVS 132
Query: 136 YEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTSGIQGQVQVGAEGEELESKKRKD 195
E HI GKKHKKNLQ NPT A SHANVQ+ TS IQGQ +G E+ E KK+ D
Sbjct: 133 LENHIAGKKHKKNLQRQTNPTVA-----SHANVQTDTSSIQGQALIGPVPEQSEPKKQVD 187
Query: 196 LSGGTPM--------------DSVKICTVCNVMCNSEDTYSKHLAGKRHTAQVGLMNNNG 241
G + DSVK NV ++ + + L
Sbjct: 188 SIQGQALIGPVAEQSEPKKQVDSVK-----NVQTDTSSIHGQAL---------------- 226
Query: 242 IGPSVAAFKRRKAPKKIQVAQSAWCEVCKITCDTKDMYIIHLSG--------KKHLKNLE 293
IGP + PKK QV V + DT + L G KK + + +
Sbjct: 227 IGP----VAEQSEPKK-QVD-----SVNNVQTDTSGIQGQELIGPVAEHSEPKKQVDSFK 276
Query: 294 KLSKPETGVGASAAPANPIIGPLEKPGSDKPRKAPEMDIETKKRKI----VEGGAAE--- 346
+ + + A +IGP+ + K + +++T I + G AE
Sbjct: 277 NVQTDTSSIQGQA-----LIGPVAEQSEPKKQVDSVKNVQTDTSGIQGQALIGPVAEHSE 331
Query: 347 -----AAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKKK 381
+V++C CNVVC + +N H+ G KHAA V K
Sbjct: 332 PKKQVDSVKVCSTCNVVCVGQDTYNKHVAGRKHAAKVALK 371
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 114 KTKVTKAMQCEVCKIDCNTADVYEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTS 173
K KV +++ CE CKI+CN+ D Y HI GKKH +NL+ +NP + G A ++ +
Sbjct: 397 KIKVAESVWCEFCKINCNSRDSYTAHISGKKHLRNLEKLSNPKVGVGSG---ATPTTTAT 453
Query: 174 GIQGQVQVGAEGEEL----------ESKKRKDLSGGTPMDSVKICTVCNVMCNSEDTYSK 223
+ Q + + L E++KRK + G ++ +K+CT+CNV+CNS+ +
Sbjct: 454 ITIIETQEKPDSDNLKAKQVPELDIEAEKRKAVERGAAVNDIKMCTLCNVVCNSQANLNT 513
Query: 224 HLAGKRHTAQV 234
HL+ H A V
Sbjct: 514 HLSDHNHAAMV 524
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 65/220 (29%)
Query: 114 KTKVTKAMQCEVCKIDCNTADVYEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTS 173
K +V C C + C D Y KH+ G+KH + + +N GPS A
Sbjct: 333 KKQVDSVKVCSTCNVVCVGQDTYNKHVAGRKHAAKVALKSNDGI----GPSIA------- 381
Query: 174 GIQGQVQVGAEGEELESKKRKDLSGGTPMDSVKI-----CTVCNVMCNSEDTYSKHLAGK 228
E K++ D +K+ C C + CNS D+Y+ H++GK
Sbjct: 382 ---------------ELKRKGDAPIEKAAKKIKVAESVWCEFCKINCNSRDSYTAHISGK 426
Query: 229 RHTAQVGLMNNNGIGP----------------------------------SVAAFKRRKA 254
+H + ++N +G + A KR+
Sbjct: 427 KHLRNLEKLSNPKVGVGSGATPTTTATITIIETQEKPDSDNLKAKQVPELDIEAEKRKAV 486
Query: 255 PKKIQVAQSAWCEVCKITCDTKDMYIIHLSGKKHLKNLEK 294
+ V C +C + C+++ HLS H ++K
Sbjct: 487 ERGAAVNDIKMCTLCNVVCNSQANLNTHLSDHNHAAMVKK 526
>Medtr5g097950.2 | C2H2 type zinc-finger protein | LC |
chr5:42894518-42891635 | 20130731
Length = 496
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 155/226 (68%), Gaps = 20/226 (8%)
Query: 167 NVQSSTSGIQGQVQVGAEGEELESKKRKDLSGGTPMDSVKICTVCNVMCNSEDTYSKHLA 226
NVQ+ TSGIQGQ +G E E KK+ +DSVK+C+ CNV+C +DTY+KH+A
Sbjct: 273 NVQTDTSGIQGQALIGPVAEHSEPKKQ--------VDSVKVCSTCNVVCVGQDTYNKHVA 324
Query: 227 GKRHTAQVGLMNNNGIGPSVAAFKRR------KAPKKIQVAQSAWCEVCKITCDTKDMYI 280
G++H A+V L +N+GIGPS+A KR+ KA KKI+VA+S WCE CKI C+++D Y
Sbjct: 325 GRKHAAKVALKSNDGIGPSIAELKRKGDAPIEKAAKKIKVAESVWCEFCKINCNSRDSYT 384
Query: 281 IHLSGKKHLKNLEKLSKPETGVGASAAPANPIIGPL----EKPGSD--KPRKAPEMDIET 334
H+SGKKHL+NLEKLS P+ GVG+ A P + EKP SD K ++ PE+DIE
Sbjct: 385 AHISGKKHLRNLEKLSNPKVGVGSGATPTTTATITIIETQEKPDSDNLKAKQVPELDIEA 444
Query: 335 KKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKK 380
+KRK VE GAA +++C LCNVVCNS+ NTHL H HAAMVKK
Sbjct: 445 EKRKAVERGAAVNDIKMCTLCNVVCNSQANLNTHLSDHNHAAMVKK 490
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 156/340 (45%), Gaps = 75/340 (22%)
Query: 76 ASGSSHVTPVASASLPYAWNGAWSHQVFTNDATVVLPHKTKVTKAMQCEVCKIDCNTADV 135
A GSSH T ASLP A NG+W Q++ N+ ++LP++TKV KA +CEVC+I+ N+
Sbjct: 37 AVGSSHQTSAVPASLPSAHNGSWQLQIYGNETKIMLPNQTKVIKAFRCEVCEIEVNSQVS 96
Query: 136 YEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTSGIQGQVQVGAEGEELESKKRKD 195
E HI GKKHKKNLQ NPT A SHANVQ+ TS IQGQ +G E+ E KK+ D
Sbjct: 97 LENHIAGKKHKKNLQRQTNPTVA-----SHANVQTDTSSIQGQALIGPVPEQSEPKKQVD 151
Query: 196 LSGGTPM--------------DSVKICTVCNVMCNSEDTYSKHLAGKRHTAQVGLMNNNG 241
G + DSVK NV ++ + + L
Sbjct: 152 SIQGQALIGPVAEQSEPKKQVDSVK-----NVQTDTSSIHGQAL---------------- 190
Query: 242 IGPSVAAFKRRKAPKKIQVAQSAWCEVCKITCDTKDMYIIHLSG--------KKHLKNLE 293
IGP + PKK QV V + DT + L G KK + + +
Sbjct: 191 IGP----VAEQSEPKK-QVD-----SVNNVQTDTSGIQGQELIGPVAEHSEPKKQVDSFK 240
Query: 294 KLSKPETGVGASAAPANPIIGPLEKPGSDKPRKAPEMDIETKKRKI----VEGGAAE--- 346
+ + + A +IGP+ + K + +++T I + G AE
Sbjct: 241 NVQTDTSSIQGQA-----LIGPVAEQSEPKKQVDSVKNVQTDTSGIQGQALIGPVAEHSE 295
Query: 347 -----AAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKKK 381
+V++C CNVVC + +N H+ G KHAA V K
Sbjct: 296 PKKQVDSVKVCSTCNVVCVGQDTYNKHVAGRKHAAKVALK 335
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 114 KTKVTKAMQCEVCKIDCNTADVYEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTS 173
K KV +++ CE CKI+CN+ D Y HI GKKH +NL+ +NP + G A ++ +
Sbjct: 361 KIKVAESVWCEFCKINCNSRDSYTAHISGKKHLRNLEKLSNPKVGVGSG---ATPTTTAT 417
Query: 174 GIQGQVQVGAEGEEL----------ESKKRKDLSGGTPMDSVKICTVCNVMCNSEDTYSK 223
+ Q + + L E++KRK + G ++ +K+CT+CNV+CNS+ +
Sbjct: 418 ITIIETQEKPDSDNLKAKQVPELDIEAEKRKAVERGAAVNDIKMCTLCNVVCNSQANLNT 477
Query: 224 HLAGKRHTAQV 234
HL+ H A V
Sbjct: 478 HLSDHNHAAMV 488
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 65/220 (29%)
Query: 114 KTKVTKAMQCEVCKIDCNTADVYEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQSSTS 173
K +V C C + C D Y KH+ G+KH + + +N GPS A
Sbjct: 297 KKQVDSVKVCSTCNVVCVGQDTYNKHVAGRKHAAKVALKSNDGI----GPSIA------- 345
Query: 174 GIQGQVQVGAEGEELESKKRKDLSGGTPMDSVKI-----CTVCNVMCNSEDTYSKHLAGK 228
E K++ D +K+ C C + CNS D+Y+ H++GK
Sbjct: 346 ---------------ELKRKGDAPIEKAAKKIKVAESVWCEFCKINCNSRDSYTAHISGK 390
Query: 229 RHTAQVGLMNNNGIGP----------------------------------SVAAFKRRKA 254
+H + ++N +G + A KR+
Sbjct: 391 KHLRNLEKLSNPKVGVGSGATPTTTATITIIETQEKPDSDNLKAKQVPELDIEAEKRKAV 450
Query: 255 PKKIQVAQSAWCEVCKITCDTKDMYIIHLSGKKHLKNLEK 294
+ V C +C + C+++ HLS H ++K
Sbjct: 451 ERGAAVNDIKMCTLCNVVCNSQANLNTHLSDHNHAAMVKK 490