Miyakogusa Predicted Gene
- Lj0g3v0146189.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0146189.1 Non Characterized Hit- tr|I1LNT9|I1LNT9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40241
PE,30,5e-16,seg,NULL,CUFF.8911.1
(267 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g045270.1 | hypothetical protein | HC | chr7:15901273-1590... 81 1e-15
Medtr4g036465.1 | hypothetical protein | HC | chr4:13127334-1312... 71 1e-12
>Medtr7g045270.1 | hypothetical protein | HC |
chr7:15901273-15903409 | 20130731
Length = 114
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 37/129 (28%)
Query: 1 MGGGALHVDHLVPQFRXXXXXXXXXXXXXXXXXXXXXXXXDDSMLFSPHNSLSCCSCHSQ 60
MGGG +H+DHLVPQ L + + +LS C+ Q
Sbjct: 1 MGGGTMHIDHLVPQ------------------------------LSNANKTLSSSCCNGQ 30
Query: 61 FCRKMELVDGKEAKTSSGCLPDSVFGVVPSQWEVEDAVSALQEFIQAVAVSSSSTHEQFS 120
FCRK E+ TS+G L + VF VPS+ EVEDA+SALQEF++AV+ + S
Sbjct: 31 FCRKQEI-------TSNGSLYNPVFETVPSRREVEDAISALQEFMKAVSTTIIDQQIADS 83
Query: 121 GSYDPRIVH 129
YD RIVH
Sbjct: 84 YDYDSRIVH 92
>Medtr4g036465.1 | hypothetical protein | HC |
chr4:13127334-13124049 | 20130731
Length = 274
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 29/189 (15%)
Query: 85 FGVVPSQWEVEDAVSALQEFIQAVAVSSSSTHEQFS------GS---------------- 122
G PSQ EV DA+S+LQ + + + F+ GS
Sbjct: 68 IGPPPSQTEVHDALSSLQRVLGPASRAELLRDRYFNRLEIELGSLGLVSEDENIDWLEPS 127
Query: 123 ---YDPRIVHSQGYRRLHDALQLLQADPAIKRLVISLSSDNAVWDAVMSHVLHQKLPELP 179
Y+PR++ G+ R++ A+ LLQ DP+++RLV SLS+D AVW+AVM++ + Q+L
Sbjct: 128 LFPYNPRMLQDDGFDRVYYAIHLLQTDPSVQRLVKSLSTDEAVWEAVMNNEVVQQLRGSI 187
Query: 180 DSGKYRRPQISEQNEFGLYILNWIRDIIKGKILELIESFMSLLSDLFQ--SPKVENATEN 237
S + N + I W+ + K++E+I+ ++ + FQ K T++
Sbjct: 188 SSDQDGIADDDPDNTTNVLI--WLLSTARAKLIEVIKKITKIVINFFQHSYKKTIALTKD 245
Query: 238 ATELDEKVR 246
+ EK+R
Sbjct: 246 SQPFIEKLR 254