Miyakogusa Predicted Gene

Lj0g3v0146189.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146189.1 Non Characterized Hit- tr|I1LNT9|I1LNT9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40241
PE,30,5e-16,seg,NULL,CUFF.8911.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g045270.1 | hypothetical protein | HC | chr7:15901273-1590...    81   1e-15
Medtr4g036465.1 | hypothetical protein | HC | chr4:13127334-1312...    71   1e-12

>Medtr7g045270.1 | hypothetical protein | HC |
           chr7:15901273-15903409 | 20130731
          Length = 114

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 37/129 (28%)

Query: 1   MGGGALHVDHLVPQFRXXXXXXXXXXXXXXXXXXXXXXXXDDSMLFSPHNSLSCCSCHSQ 60
           MGGG +H+DHLVPQ                              L + + +LS   C+ Q
Sbjct: 1   MGGGTMHIDHLVPQ------------------------------LSNANKTLSSSCCNGQ 30

Query: 61  FCRKMELVDGKEAKTSSGCLPDSVFGVVPSQWEVEDAVSALQEFIQAVAVSSSSTHEQFS 120
           FCRK E+       TS+G L + VF  VPS+ EVEDA+SALQEF++AV+ +        S
Sbjct: 31  FCRKQEI-------TSNGSLYNPVFETVPSRREVEDAISALQEFMKAVSTTIIDQQIADS 83

Query: 121 GSYDPRIVH 129
             YD RIVH
Sbjct: 84  YDYDSRIVH 92


>Medtr4g036465.1 | hypothetical protein | HC |
           chr4:13127334-13124049 | 20130731
          Length = 274

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 29/189 (15%)

Query: 85  FGVVPSQWEVEDAVSALQEFIQAVAVSSSSTHEQFS------GS---------------- 122
            G  PSQ EV DA+S+LQ  +   + +       F+      GS                
Sbjct: 68  IGPPPSQTEVHDALSSLQRVLGPASRAELLRDRYFNRLEIELGSLGLVSEDENIDWLEPS 127

Query: 123 ---YDPRIVHSQGYRRLHDALQLLQADPAIKRLVISLSSDNAVWDAVMSHVLHQKLPELP 179
              Y+PR++   G+ R++ A+ LLQ DP+++RLV SLS+D AVW+AVM++ + Q+L    
Sbjct: 128 LFPYNPRMLQDDGFDRVYYAIHLLQTDPSVQRLVKSLSTDEAVWEAVMNNEVVQQLRGSI 187

Query: 180 DSGKYRRPQISEQNEFGLYILNWIRDIIKGKILELIESFMSLLSDLFQ--SPKVENATEN 237
            S +         N   + I  W+    + K++E+I+    ++ + FQ    K    T++
Sbjct: 188 SSDQDGIADDDPDNTTNVLI--WLLSTARAKLIEVIKKITKIVINFFQHSYKKTIALTKD 245

Query: 238 ATELDEKVR 246
           +    EK+R
Sbjct: 246 SQPFIEKLR 254