Miyakogusa Predicted Gene

Lj0g3v0146019.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146019.2 Non Characterized Hit- tr|G7JZF8|G7JZF8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.11,0.000000008, ,CUFF.8898.2
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g055280.1 | transmembrane protein, putative | LC | chr5:22...    65   2e-11
Medtr5g055310.1 | wall-associated kinase family protein | HC | c...    57   3e-09

>Medtr5g055280.1 | transmembrane protein, putative | LC |
           chr5:22769828-22770640 | 20130731
          Length = 232

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 4/131 (3%)

Query: 2   FP-SPVQNQNVGLYIRGCETSLAVKKLELKNHIYEIDSIYQEDKYTSIFIHNAADAEIDS 60
           FP + V  +  GLYI GC+ + +VK + L N  YEIDSI   +    I+  N+++ E   
Sbjct: 45  FPFTTVDKRECGLYIIGCDNNSSVKTINLINQTYEIDSISYMNNSAIIYGLNSSELEPIK 104

Query: 61  ESPQ-KTNSINFTICRHRSTPETGNMIK-KPCPSYDIYYSSTYQNPWFPALLSFACLLPA 118
             P    N++NF +C H       N  K K C  YDIY++ST   P    +   AC  P 
Sbjct: 105 NKPNFSINTVNFYVCNHGYDNSHDNKFKYKNCADYDIYFTSTPDKPPMFPIFPLAC-FPV 163

Query: 119 PDPPEPCVPSI 129
           P     CV  I
Sbjct: 164 PFETFNCVDII 174


>Medtr5g055310.1 | wall-associated kinase family protein | HC |
           chr5:22781073-22784451 | 20130731
          Length = 632

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 3/113 (2%)

Query: 4   SPVQNQNVGLYIRGCETSLAVKKLELKNHIYEIDSIYQEDKYTSIFIHNAADAEIDSESP 63
           + V +   G YI GC+ S  VK ++L++  Y IDS+Y  +    I+  N+    ++S   
Sbjct: 45  TTVNDSECGYYISGCDNSSLVKTIQLRDQTYIIDSMYYMNNSIIIYSPNSHKLNLESFKN 104

Query: 64  QKTNSINFTICRHRSTPETGNMIK-KPCPSYDIYYSSTYQNPWFPALLSFACL 115
           +   SIN TI  HR      +M K + C  YDIY++S    P FP +  F CL
Sbjct: 105 RPIFSIN-TINFHRCNHHREHMFKYRNCSDYDIYFTSIPDYPMFP-IFPFPCL 155