Miyakogusa Predicted Gene

Lj0g3v0145439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0145439.1 tr|G7IYW1|G7IYW1_MEDTR Uridine 5'-monophosphate
synthase OS=Medicago truncatula GN=MTR_3g017580 PE=3,93.72,0,no
description,NULL; no description,Aldolase-type TIM barrel; seg,NULL;
OMPdecase,Orotidine 5'-phosp,CUFF.8877.1
         (478 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g017580.2 | uridine 5-monophosphate synthase-like protein ...   857   0.0  
Medtr3g017580.1 | uridine 5-monophosphate synthase-like protein ...   857   0.0  
Medtr1g025060.1 | uridine 5-monophosphate synthase-like protein ...   852   0.0  
Medtr8g038390.1 | uridine 5-monophosphate synthase-like protein ...   763   0.0  
Medtr8g038520.1 | zinc finger, C3HC4 type (RING finger) protein ...    50   4e-06

>Medtr3g017580.2 | uridine 5-monophosphate synthase-like protein |
           HC | chr3:5031496-5035622 | 20130731
          Length = 498

 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/478 (87%), Positives = 436/478 (91%)

Query: 1   MSASSLKESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXX 60
           M++SSL ESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLL           
Sbjct: 21  MASSSLVESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLQQISQTLISSV 80

Query: 61  XXXXFDVVCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIE 120
               FD+VCGVPYTALPIAT VSLAQNIPMVMRRKEVKDYGTAKAIEGDF+ GQSCLIIE
Sbjct: 81  SSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEVKDYGTAKAIEGDFKSGQSCLIIE 140

Query: 121 DLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
           DLVTSGTSVLETAAPLRSVGLKI+DAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL
Sbjct: 141 DLVTSGTSVLETAAPLRSVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 200

Query: 181 KDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEI 240
           +DHG+LD+EMVGVVT+FLDENRKVA++AKVEKP TK K+LSF ER+ LSKNPTGK+LFEI
Sbjct: 201 RDHGRLDDEMVGVVTKFLDENRKVAALAKVEKPITKVKSLSFGERANLSKNPTGKKLFEI 260

Query: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300
           MA+KESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN
Sbjct: 261 MAQKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 320

Query: 301 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXX 360
           FLIFEDRKFADIGNTVTMQY GGIFHILDWAHIVNAHIISGPGIVD              
Sbjct: 321 FLIFEDRKFADIGNTVTMQYAGGIFHILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLL 380

Query: 361 XXAEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
             AEMSSAGN AKGDYTAAA+KIAE+HSDFVIGFISVNPASWPGAPINPSFIQATPGVQM
Sbjct: 381 LLAEMSSAGNLAKGDYTAAALKIAEEHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 440

Query: 421 VTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKCA 478
           VTGGD LGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYR+QGWNAYLAK A
Sbjct: 441 VTGGDGLGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRVQGWNAYLAKSA 498


>Medtr3g017580.1 | uridine 5-monophosphate synthase-like protein |
           HC | chr3:5030504-5035622 | 20130731
          Length = 478

 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/478 (87%), Positives = 436/478 (91%)

Query: 1   MSASSLKESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXX 60
           M++SSL ESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLL           
Sbjct: 1   MASSSLVESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLQQISQTLISSV 60

Query: 61  XXXXFDVVCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIE 120
               FD+VCGVPYTALPIAT VSLAQNIPMVMRRKEVKDYGTAKAIEGDF+ GQSCLIIE
Sbjct: 61  SSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEVKDYGTAKAIEGDFKSGQSCLIIE 120

Query: 121 DLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
           DLVTSGTSVLETAAPLRSVGLKI+DAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL
Sbjct: 121 DLVTSGTSVLETAAPLRSVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180

Query: 181 KDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEI 240
           +DHG+LD+EMVGVVT+FLDENRKVA++AKVEKP TK K+LSF ER+ LSKNPTGK+LFEI
Sbjct: 181 RDHGRLDDEMVGVVTKFLDENRKVAALAKVEKPITKVKSLSFGERANLSKNPTGKKLFEI 240

Query: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300
           MA+KESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN
Sbjct: 241 MAQKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300

Query: 301 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXX 360
           FLIFEDRKFADIGNTVTMQY GGIFHILDWAHIVNAHIISGPGIVD              
Sbjct: 301 FLIFEDRKFADIGNTVTMQYAGGIFHILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLL 360

Query: 361 XXAEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
             AEMSSAGN AKGDYTAAA+KIAE+HSDFVIGFISVNPASWPGAPINPSFIQATPGVQM
Sbjct: 361 LLAEMSSAGNLAKGDYTAAALKIAEEHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420

Query: 421 VTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKCA 478
           VTGGD LGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYR+QGWNAYLAK A
Sbjct: 421 VTGGDGLGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRVQGWNAYLAKSA 478


>Medtr1g025060.1 | uridine 5-monophosphate synthase-like protein |
           HC | chr1:7989023-7993790 | 20130731
          Length = 478

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/478 (87%), Positives = 435/478 (91%)

Query: 1   MSASSLKESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXX 60
           M++SSL ESLVLQLHEISAVKFGNFKLKSGI+SPIYIDLRLIISYPSLL           
Sbjct: 1   MASSSLVESLVLQLHEISAVKFGNFKLKSGITSPIYIDLRLIISYPSLLQQISQTLISSV 60

Query: 61  XXXXFDVVCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIE 120
               FD+VCGVPYTALPIAT VSLAQNIPMVMRRKEVKDYGTAKAIEGDF+PGQSCLIIE
Sbjct: 61  SSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEVKDYGTAKAIEGDFKPGQSCLIIE 120

Query: 121 DLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
           DLVTSGTSVLETAAPLRSVGLKI+DAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL
Sbjct: 121 DLVTSGTSVLETAAPLRSVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180

Query: 181 KDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEI 240
           + HG+LD+EMVGVVT+FLDENRKVA++AKVEKP TK K+LSF ER+ LSKNPTGK+LFEI
Sbjct: 181 RVHGRLDDEMVGVVTKFLDENRKVAALAKVEKPITKVKSLSFGERANLSKNPTGKKLFEI 240

Query: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300
           MA+KESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTP FGSKLLSIAEKHN
Sbjct: 241 MAQKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPVFGSKLLSIAEKHN 300

Query: 301 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXX 360
           FLIFEDRKFADIGNTVTMQY GGIFHILDWAHIVNAHIISGPGIVD              
Sbjct: 301 FLIFEDRKFADIGNTVTMQYAGGIFHILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLL 360

Query: 361 XXAEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
             AEMSSAGN AKGDYTAAA+KIAE+HSDFVIGFISVNPASWPGAP+NPSFIQATPGVQM
Sbjct: 361 LLAEMSSAGNLAKGDYTAAALKIAEEHSDFVIGFISVNPASWPGAPVNPSFIQATPGVQM 420

Query: 421 VTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKCA 478
           VTGGD LGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAK A
Sbjct: 421 VTGGDGLGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKSA 478


>Medtr8g038390.1 | uridine 5-monophosphate synthase-like protein |
           HC | chr8:14243549-14237808 | 20130731
          Length = 469

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/470 (80%), Positives = 402/470 (85%), Gaps = 3/470 (0%)

Query: 8   ESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXXXXXXFDV 67
           ESLVL+LHEISAVKFGNFKLKSGISSPIYIDLRLIISYPS+L               FD+
Sbjct: 2   ESLVLKLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSVLRQISQTMISSVSNTKFDL 61

Query: 68  VCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIEDLVTSGT 127
           VCGVPYTALPIAT VS+  NIPMVMRRKEVKDYGT+KAIEGDF+  QSCLIIEDLVTSGT
Sbjct: 62  VCGVPYTALPIATCVSVTHNIPMVMRRKEVKDYGTSKAIEGDFKHDQSCLIIEDLVTSGT 121

Query: 128 SVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKILKDHGKLD 187
           SVLETAAPLR++GLK++DAVVLIDREQGGRENLE NGIKLHAI+KLTEMVKILK+ G+LD
Sbjct: 122 SVLETAAPLRNIGLKVSDAVVLIDREQGGRENLESNGIKLHAILKLTEMVKILKEKGRLD 181

Query: 188 EEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEIMAEKESN 247
           EEMV VV RFL+EN+KVA+   +E  T   KALS++ER+KLSKNP GKRLFEIMAEKESN
Sbjct: 182 EEMVRVVMRFLEENQKVAA---LENTTKLKKALSYLERAKLSKNPMGKRLFEIMAEKESN 238

Query: 248 LCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHNFLIFEDR 307
           LCLAADVGTAAELLEIAEKVG EICLLKTHVDI PDFTPDFGSKL +IAEKHNFLIFEDR
Sbjct: 239 LCLAADVGTAAELLEIAEKVGREICLLKTHVDIFPDFTPDFGSKLRAIAEKHNFLIFEDR 298

Query: 308 KFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXXXXAEMSS 367
           KFADIGNT  MQYEGGIFHIL+WA IVNAHIISGPGIVD                AEMSS
Sbjct: 299 KFADIGNTSAMQYEGGIFHILEWADIVNAHIISGPGIVDGLKLKGLPRGKGLLLLAEMSS 358

Query: 368 AGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDAL 427
           AGN AKGDYTAAAVKIAEDHSDFVIGFISVNPASW GAPINP FI ATPGVQ+  GGD L
Sbjct: 359 AGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWSGAPINPCFIHATPGVQVAIGGDGL 418

Query: 428 GQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKC 477
           GQQYNTPYSV+HDRGSDIIIVG GIIK+ANP   A EYRLQGW+AYL KC
Sbjct: 419 GQQYNTPYSVIHDRGSDIIIVGCGIIKSANPVAVAREYRLQGWSAYLEKC 468


>Medtr8g038520.1 | zinc finger, C3HC4 type (RING finger) protein |
           LC | chr8:14273647-14276050 | 20130731
          Length = 348

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 6/41 (14%)

Query: 437 VVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKC 477
           V+HDRGSDIII      +A N A AA EYRLQ W+AYL KC
Sbjct: 282 VIHDRGSDIII------RAVNAAAAAREYRLQRWSAYLDKC 316