Miyakogusa Predicted Gene

Lj0g3v0144679.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0144679.1 Non Characterized Hit- tr|I1LPV8|I1LPV8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29192
PE,89.06,0,coiled-coil,NULL; YEATS,YEATS; seg,NULL; YEATS
DOMAIN,YEATS,CUFF.8824.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g072210.1 | YEATS family protein | HC | chr4:27406685-2740...   422   e-118
Medtr5g021980.1 | YEATS family protein | HC | chr5:8580679-85832...   340   9e-94

>Medtr4g072210.1 | YEATS family protein | HC |
           chr4:27406685-27401742 | 20130731
          Length = 273

 Score =  422 bits (1085), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 195/256 (76%), Positives = 221/256 (86%)

Query: 1   MTNSSSSKKHDQDQPESSSPTLKSQRTKMPKSEDTDKKNSGKKLKDVEISVPIVYGNIAF 60
           M N+SSSK HDQDQ + S PT  S   KM KSED DKKNSGKKLKDVEISVPIVYGN++F
Sbjct: 1   MLNTSSSKNHDQDQSQLSGPTPNSHPIKMGKSEDNDKKNSGKKLKDVEISVPIVYGNVSF 60

Query: 61  WLGKKASEYQSHKWTVYVRGATNEDLGAIVKRCVFQLHSSFNNPTRVVESPPFELSETGW 120
           WLGKKASEYQSHKWT+YVRGA+NEDLG IVKR VFQLH+SFNNPTR+V++PPFELSE GW
Sbjct: 61  WLGKKASEYQSHKWTIYVRGASNEDLGVIVKRVVFQLHTSFNNPTRIVDAPPFELSEAGW 120

Query: 121 GEFEIAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMTTKKPVVVELYDEIVFPDPSEAF 180
           GEFEIAITLYFHSDVCDKP+NLYH L+LYP+DE+SS +TKKPVVVE YDE+VFPDPSEAF
Sbjct: 121 GEFEIAITLYFHSDVCDKPVNLYHQLRLYPDDESSSYSTKKPVVVEFYDEVVFPDPSEAF 180

Query: 181 LSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKGDTKDHSLTQWFTNFSEADEXXXXX 240
           L+R+Q HP VN+PRLPAG+TLPPPIP+EDASKRR+GDTKD+ L+QWF NFSEADE     
Sbjct: 181 LARLQNHPVVNMPRLPAGLTLPPPIPIEDASKRRRGDTKDNPLSQWFLNFSEADELLQLA 240

Query: 241 XXXXXXXXHIAKLRRQ 256
                   HI+KL+RQ
Sbjct: 241 AARQQVQAHISKLKRQ 256


>Medtr5g021980.1 | YEATS family protein | HC | chr5:8580679-8583227
           | 20130731
          Length = 275

 Score =  340 bits (872), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 164/251 (65%), Positives = 193/251 (76%), Gaps = 2/251 (0%)

Query: 8   KKHDQDQP-ESSSPTLKSQRTKMP-KSEDTDKKNSGKKLKDVEISVPIVYGNIAFWLGKK 65
           K+H  + P +  S  +K  R K+   SED+DKK   K++KDVEI VPIVYG IAF+LG+K
Sbjct: 10  KRHQDENPRDDDSSDIKPSRLKISLPSEDSDKKILIKRVKDVEICVPIVYGTIAFFLGRK 69

Query: 66  ASEYQSHKWTVYVRGATNEDLGAIVKRCVFQLHSSFNNPTRVVESPPFELSETGWGEFEI 125
           ASE QSHKWTVYVRGA+NEDL A+VKR VFQLH SFNNPTRVVESPPFE+SE GWGEFEI
Sbjct: 70  ASESQSHKWTVYVRGASNEDLSAVVKRVVFQLHPSFNNPTRVVESPPFEISECGWGEFEI 129

Query: 126 AITLYFHSDVCDKPLNLYHHLKLYPEDENSSMTTKKPVVVELYDEIVFPDPSEAFLSRVQ 185
           AITL+FHSD C+K L+LYHHLKLYPEDE+    TK+PVV+E Y+E+VFP+PSEAFL+RVQ
Sbjct: 130 AITLFFHSDACEKQLDLYHHLKLYPEDESGPQNTKRPVVIESYNEVVFPEPSEAFLARVQ 189

Query: 186 GHPAVNLPRLPAGVTLPPPIPVEDASKRRKGDTKDHSLTQWFTNFSEADEXXXXXXXXXX 245
            HPAV +PRLP G+ LP P+PVE  + + +GDTKDH L  WF NFSEADE          
Sbjct: 190 NHPAVVVPRLPDGLNLPSPVPVEPMNDKERGDTKDHPLNHWFLNFSEADELLKLAAARQQ 249

Query: 246 XXXHIAKLRRQ 256
              HI KLRRQ
Sbjct: 250 VQAHIVKLRRQ 260