Miyakogusa Predicted Gene

Lj0g3v0142769.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0142769.2 Non Characterized Hit- tr|I3ST46|I3ST46_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.44,0,Peptidase_S24,Peptidase S24/S26A/S26B; LexA/Signal
peptidase,Peptidase S24/S26A/S26B/S26C; SIGNALPTA,CUFF.9169.2
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103570.1 | microsomal signal peptidase subunit | HC | chr...   344   2e-95

>Medtr2g103570.1 | microsomal signal peptidase subunit | HC |
           chr2:44601268-44597771 | 20130731
          Length = 180

 Score =  344 bits (883), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/180 (93%), Positives = 177/180 (98%)

Query: 1   MGWIGETVDSVKSLQIRQVLTQAVTLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEP 60
           MG++G+TVDS+KSLQIRQVLTQAV+LGMIVTSALIIWKALMC+TGSESPVVVVLSGSMEP
Sbjct: 1   MGFVGDTVDSIKSLQIRQVLTQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP 60

Query: 61  GFKRGDILFLRMSKEPIRAGEIVVFNVDGREIPIVHRVIKVHEREDNGEVDVLTKGDNNY 120
           GFKRGDILFL MSK+PIRAGEIVVFN+DGREIPIVHRVIKVHER D GEVDVLTKGDNNY
Sbjct: 61  GFKRGDILFLHMSKDPIRAGEIVVFNIDGREIPIVHRVIKVHERGDTGEVDVLTKGDNNY 120

Query: 121 GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180
           GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSK+
Sbjct: 121 GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKE 180