Miyakogusa Predicted Gene

Lj0g3v0142719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0142719.1 Non Characterized Hit- tr|K4DFU4|K4DFU4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,35.46,5e-19,
,18829_g.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286...   128   2e-30
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286...   127   3e-30
Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286...   127   4e-30

>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
           chr8:10528628-10524338 | 20130731
          Length = 591

 Score =  128 bits (322), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/141 (45%), Positives = 89/141 (63%), Gaps = 3/141 (2%)

Query: 13  FEARAYKSVMHMSLTREDCITMFPSGHLHSEDFPFGGLIFILSASCRKAEHDSPHGFGFA 72
           FE    + V+++ L RE+C  +FPSG ++S+ F  GG  F LSA C   +  S H FG  
Sbjct: 453 FELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 512

Query: 73  VGRRKWCKGG-SIDADYKFAVMLRPTKKFATLHISNSVFIYGKFKGCKNLFGVPWTSFIA 131
           +G ++  KG  S   DY+FA   RPT++F + +  N  F  GK  G +NLF +PWTSF+A
Sbjct: 513 LGMQE--KGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMA 570

Query: 132 EDSPFFIEGILHLRAKLTIRR 152
           ED  +FI G+LHLRA+LTIR+
Sbjct: 571 EDCLYFINGVLHLRAELTIRQ 591


>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524338 | 20130731
          Length = 559

 Score =  127 bits (320), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/141 (45%), Positives = 89/141 (63%), Gaps = 3/141 (2%)

Query: 13  FEARAYKSVMHMSLTREDCITMFPSGHLHSEDFPFGGLIFILSASCRKAEHDSPHGFGFA 72
           FE    + V+++ L RE+C  +FPSG ++S+ F  GG  F LSA C   +  S H FG  
Sbjct: 421 FELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 480

Query: 73  VGRRKWCKGG-SIDADYKFAVMLRPTKKFATLHISNSVFIYGKFKGCKNLFGVPWTSFIA 131
           +G ++  KG  S   DY+FA   RPT++F + +  N  F  GK  G +NLF +PWTSF+A
Sbjct: 481 LGMQE--KGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMA 538

Query: 132 EDSPFFIEGILHLRAKLTIRR 152
           ED  +FI G+LHLRA+LTIR+
Sbjct: 539 EDCLYFINGVLHLRAELTIRQ 559


>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524289 | 20130731
          Length = 551

 Score =  127 bits (319), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 64/141 (45%), Positives = 89/141 (63%), Gaps = 3/141 (2%)

Query: 13  FEARAYKSVMHMSLTREDCITMFPSGHLHSEDFPFGGLIFILSASCRKAEHDSPHGFGFA 72
           FE    + V+++ L RE+C  +FPSG ++S+ F  GG  F LSA C   +  S H FG  
Sbjct: 413 FELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 472

Query: 73  VGRRKWCKGG-SIDADYKFAVMLRPTKKFATLHISNSVFIYGKFKGCKNLFGVPWTSFIA 131
           +G ++  KG  S   DY+FA   RPT++F + +  N  F  GK  G +NLF +PWTSF+A
Sbjct: 473 LGMQE--KGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMA 530

Query: 132 EDSPFFIEGILHLRAKLTIRR 152
           ED  +FI G+LHLRA+LTIR+
Sbjct: 531 EDCLYFINGVLHLRAELTIRQ 551