Miyakogusa Predicted Gene

Lj0g3v0142099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0142099.1 Non Characterized Hit- tr|K4CU06|K4CU06_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.04,2e-17,seg,NULL,CUFF.8679.1
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0027s0180.1 | hypothetical protein | HC | scaffold0027:5850...   120   5e-28
Medtr7g059080.1 | hypothetical protein | HC | chr7:21324138-2132...   113   9e-26
Medtr0027s0200.1 | hypothetical protein | HC | scaffold0027:6564...    62   2e-10

>Medtr0027s0180.1 | hypothetical protein | HC |
           scaffold0027:58501-61787 | 20130731
          Length = 457

 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 108/212 (50%), Gaps = 36/212 (16%)

Query: 5   KDIPKACICRTPDLYGLGNLRN-------------------TKRTDSAAANVGKKVLPVT 45
           KDIPKAC  RT  L  +G  R                      +TDS     G KVLP+T
Sbjct: 248 KDIPKACFFRTLSLKRIGISRRHFVYSMKMKKEESSRDEGIVNKTDSTTHG-GNKVLPIT 306

Query: 46  -EASFSRTTERNEFV-TAEAKDQVKEDKKKAISRMKELLGLVSA-AKKDKRGKFNEQK-- 100
            EA  S + ERN+       KDQVK D+KK +SRMKELL   +A AK DK GKF  +K  
Sbjct: 307 QEAPLSSSAERNDQCDNTITKDQVKGDRKKPMSRMKELLRWAAASAKTDKGGKFYGRKVL 366

Query: 101 -FQRQGNIRATPEDYQLCSESPKIEFTWDEEXXXXXXXXXXXXXXXXXXXXXGQAQIAHS 159
            F+R+GN++A  +D Q+ +ESPKI F WD E                     GQ Q A S
Sbjct: 367 MFRRRGNLKAVQDDDQVSTESPKISFRWDME-SCSTTSSAYSAFSMASSTRNGQNQTATS 425

Query: 160 PI--------HISC-RKENWITTDSEFVVLEL 182
            I        H +C RK NWITTDSEFVVLEL
Sbjct: 426 TISIPSSQSGHTTCRRKANWITTDSEFVVLEL 457


>Medtr7g059080.1 | hypothetical protein | HC |
           chr7:21324138-21321665 | 20130731
          Length = 173

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/160 (47%), Positives = 91/160 (56%), Gaps = 16/160 (10%)

Query: 38  GKKVLPVT-EASFSRTTERNEFV-TAEAKDQVKEDKKKAISRMKELLGLVSA-AKKDKRG 94
           G KVLP+T EA  S + ERN+       KDQVK D+KK +SRMKELL   +A AK DK G
Sbjct: 15  GNKVLPITQEAPLSSSAERNDQCDNTITKDQVKGDRKKPMSRMKELLRWAAASAKTDKGG 74

Query: 95  KFNEQK---FQRQGNIRATPEDYQLCSESPKIEFTWDEEXXXXXXXXXXXXXXXXXXXXX 151
           KF  +K   F+R+GN++A  +D Q+ +ESPKI F WD E                     
Sbjct: 75  KFYGRKVLMFRRRGNLKAVQDDDQVSTESPKISFRWDME-SCSTTSSAYSAFSMASSTRN 133

Query: 152 GQAQIAHSPI--------HISC-RKENWITTDSEFVVLEL 182
           GQ Q A S I        H +C RK NWITTDSEFVVLEL
Sbjct: 134 GQNQTATSTISIPSSQSGHTTCRRKANWITTDSEFVVLEL 173


>Medtr0027s0200.1 | hypothetical protein | HC |
           scaffold0027:65646-67731 | 20130731
          Length = 235

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 60/118 (50%), Gaps = 23/118 (19%)

Query: 5   KDIPKACICRTPDLYGLGNLRN-------------------TKRTDSAAANVGKKVLPVT 45
           KDIPKAC  RT  L  +G  R                      +TDS     G KVLP+T
Sbjct: 93  KDIPKACFFRTLSLKRIGISRRHFVYSMKMKKEESSRDEGIVNKTDSTTHG-GNKVLPIT 151

Query: 46  -EASFSRTTERNEFV-TAEAKDQVKEDKKKAISRMKELLGLVSA-AKKDKRGKFNEQK 100
            EA  S + ERN+       KDQVK D+KK +SRMKELL   +A AK DK GKF  +K
Sbjct: 152 QEAPLSSSAERNDQCDNTITKDQVKGDRKKPMSRMKELLRWAAASAKTDKGGKFYGRK 209