Miyakogusa Predicted Gene

Lj0g3v0141609.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0141609.1 tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta
type OS=Lotus japonicus PE=2 SV=1,98.16,0,Proteasome,Proteasome,
subunit alpha/beta; PROTEASOME SUBUNIT BETA TYPE 7,10,NULL; PROTEASOME
SUBUNI,CUFF.8707.1
         (272 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g032930.2 | proteasome subunit beta type-7-A protein | HC ...   533   e-152
Medtr7g032930.1 | proteasome subunit beta type-7-A protein | HC ...   533   e-152
Medtr7g037830.1 | proteasome subunit beta type-7-A protein | HC ...   526   e-149
Medtr3g109210.1 | proteasome subunit beta protein | HC | chr3:50...   108   4e-24
Medtr3g089040.1 | proteasome-alpha-type-5 protein | HC | chr3:33...    81   1e-15
Medtr1g112250.2 | 20S proteasome subunit alpha | HC | chr1:50768...    64   2e-10
Medtr1g112250.1 | 20S proteasome subunit alpha | HC | chr1:50768...    64   2e-10
Medtr0167s0060.2 | 20S proteasome alpha subunit E1 | HC | scaffo...    54   2e-07
Medtr0167s0060.1 | 20S proteasome alpha subunit E1 | HC | scaffo...    54   2e-07
Medtr7g070070.1 | 20S proteasome subunit alpha | HC | chr7:25826...    53   3e-07
Medtr6g084450.1 | proteasome subunit beta protein | HC | chr6:31...    52   5e-07
Medtr5g016590.1 | 20S proteasome subunit alpha | HC | chr5:59617...    52   7e-07

>Medtr7g032930.2 | proteasome subunit beta type-7-A protein | HC |
           chr7:11619753-11611396 | 20130731
          Length = 271

 Score =  533 bits (1373), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 256/272 (94%), Positives = 267/272 (98%), Gaps = 1/272 (0%)

Query: 1   MSKTVDLPPKGGFSFDNCRRNAMLQKNGLKGPSFLKTGTTIVGLVFQDGVILGADTRATE 60
           M+K+VDLPPKGGFSFD CRRN ML+K GLK P++LKTGTTIVGLVFQDG+ILGADTRATE
Sbjct: 1   MTKSVDLPPKGGFSFDLCRRNDMLEKKGLKAPTYLKTGTTIVGLVFQDGIILGADTRATE 60

Query: 61  GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL 120
           GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL
Sbjct: 61  GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL 120

Query: 121 LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY 180
           LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY
Sbjct: 121 LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY 180

Query: 181 KESLTRDEGVKIVVEAICAGVFNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRTYVNPKG 240
           KESL+RDEGVK+VVE+ICAG+FNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRT+VNPKG
Sbjct: 181 KESLSRDEGVKLVVESICAGIFNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRTFVNPKG 240

Query: 241 FTFSKKTEVLLTKITPLKEKVEVIEGGDAMEE 272
           FTFSKKTEVLLTKITPLKEKVEVIE GDAMEE
Sbjct: 241 FTFSKKTEVLLTKITPLKEKVEVIE-GDAMEE 271


>Medtr7g032930.1 | proteasome subunit beta type-7-A protein | HC |
           chr7:11619718-11611427 | 20130731
          Length = 271

 Score =  533 bits (1373), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 256/272 (94%), Positives = 267/272 (98%), Gaps = 1/272 (0%)

Query: 1   MSKTVDLPPKGGFSFDNCRRNAMLQKNGLKGPSFLKTGTTIVGLVFQDGVILGADTRATE 60
           M+K+VDLPPKGGFSFD CRRN ML+K GLK P++LKTGTTIVGLVFQDG+ILGADTRATE
Sbjct: 1   MTKSVDLPPKGGFSFDLCRRNDMLEKKGLKAPTYLKTGTTIVGLVFQDGIILGADTRATE 60

Query: 61  GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL 120
           GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL
Sbjct: 61  GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL 120

Query: 121 LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY 180
           LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY
Sbjct: 121 LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY 180

Query: 181 KESLTRDEGVKIVVEAICAGVFNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRTYVNPKG 240
           KESL+RDEGVK+VVE+ICAG+FNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRT+VNPKG
Sbjct: 181 KESLSRDEGVKLVVESICAGIFNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRTFVNPKG 240

Query: 241 FTFSKKTEVLLTKITPLKEKVEVIEGGDAMEE 272
           FTFSKKTEVLLTKITPLKEKVEVIE GDAMEE
Sbjct: 241 FTFSKKTEVLLTKITPLKEKVEVIE-GDAMEE 271


>Medtr7g037830.1 | proteasome subunit beta type-7-A protein | HC |
           chr7:13961736-13955040 | 20130731
          Length = 271

 Score =  526 bits (1354), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/272 (92%), Positives = 264/272 (97%), Gaps = 1/272 (0%)

Query: 1   MSKTVDLPPKGGFSFDNCRRNAMLQKNGLKGPSFLKTGTTIVGLVFQDGVILGADTRATE 60
           M+K++D+PPKGGFSFD CRRN ML+K GLK PS+LKTGTTIVGLVFQDG+ILGADTRATE
Sbjct: 1   MTKSLDVPPKGGFSFDLCRRNDMLEKKGLKSPSYLKTGTTIVGLVFQDGIILGADTRATE 60

Query: 61  GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL 120
           GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL
Sbjct: 61  GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTL 120

Query: 121 LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY 180
           LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY
Sbjct: 121 LKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKY 180

Query: 181 KESLTRDEGVKIVVEAICAGVFNDLGSGSNVDVCVITKGHKEYLRNHLTPNPRTYVNPKG 240
           KESL+RDEGVK+VVE+ICAG+FNDLGSGSNVDVCVITKGHKEYLRNHL PNPRT+VNPKG
Sbjct: 181 KESLSRDEGVKLVVESICAGIFNDLGSGSNVDVCVITKGHKEYLRNHLQPNPRTFVNPKG 240

Query: 241 FTFSKKTEVLLTKITPLKEKVEVIEGGDAMEE 272
           FTFSKKTEVL TKITPLKE VEVIE GDAMEE
Sbjct: 241 FTFSKKTEVLSTKITPLKENVEVIE-GDAMEE 271


>Medtr3g109210.1 | proteasome subunit beta protein | HC |
           chr3:50493505-50489857 | 20130731
          Length = 232

 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 1/180 (0%)

Query: 38  GTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 97
           GTTI+G+ +  GV+LGAD+R + G  VA++  +KI  +  N+Y C +G+AAD++ V+D V
Sbjct: 13  GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 72

Query: 98  SSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITGPHLHTIYPHGS 156
              L  H    G+ + V  A  L++   +N + ++   L++GG D   G  ++ +   G+
Sbjct: 73  RYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNNLQTGLIVGGWDKYEGGQIYGVPLGGT 132

Query: 157 TDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLGSGSNVDVCVI 216
               PFA  GSGS      F+  +K+ +T+DE   +V +A+   +  D  SG  V   +I
Sbjct: 133 IVQQPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVII 192


>Medtr3g089040.1 | proteasome-alpha-type-5 protein | HC |
           chr3:33949434-33945682 | 20130731
          Length = 271

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 1/180 (0%)

Query: 38  GTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 97
           GTT +  +F++GV++ AD+RA+ G  ++ ++ +KI  + P +    AG AAD +     +
Sbjct: 54  GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113

Query: 98  SSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGH-VSAALVLGGVDITGPHLHTIYPHGS 156
             + +LH     R   V  A  LL   L++Y+G  +S   ++ G D TGP L+ +   G 
Sbjct: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173

Query: 157 TDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLGSGSNVDVCVI 216
                  ++GSGS  A  V +S YK  ++ +E  ++   AI    F D  SG    V  +
Sbjct: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233


>Medtr1g112250.2 | 20S proteasome subunit alpha | HC |
           chr1:50768379-50773010 | 20130731
          Length = 237

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 10/197 (5%)

Query: 35  LKTGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVT 94
           +K G+T +GL  ++GV+L  + R T  P++   + EKI  +  +I C  +G  AD   + 
Sbjct: 31  IKLGSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLV 89

Query: 95  DMVSSQLQLHRYHTGR----ESRVVTALTLLKRHLFNYQGHVS----AALVLGGVDITGP 146
           +    + Q HR+  G     ES       L  R     +  +S     +L++ G D  GP
Sbjct: 90  EHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGP 149

Query: 147 HLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLG 206
            L+   P G+        +GSGS  A S  + ++ + LT  E   I + +I   V  +  
Sbjct: 150 SLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLTLQEAETIAL-SILKQVMEEKV 208

Query: 207 SGSNVDVCVITKGHKEY 223
           + +NVD+  +   +  Y
Sbjct: 209 TPNNVDIARVAPAYHLY 225


>Medtr1g112250.1 | 20S proteasome subunit alpha | HC |
           chr1:50768358-50773041 | 20130731
          Length = 237

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 10/197 (5%)

Query: 35  LKTGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVT 94
           +K G+T +GL  ++GV+L  + R T  P++   + EKI  +  +I C  +G  AD   + 
Sbjct: 31  IKLGSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLV 89

Query: 95  DMVSSQLQLHRYHTGR----ESRVVTALTLLKRHLFNYQGHVS----AALVLGGVDITGP 146
           +    + Q HR+  G     ES       L  R     +  +S     +L++ G D  GP
Sbjct: 90  EHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGP 149

Query: 147 HLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLG 206
            L+   P G+        +GSGS  A S  + ++ + LT  E   I + +I   V  +  
Sbjct: 150 SLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLTLQEAETIAL-SILKQVMEEKV 208

Query: 207 SGSNVDVCVITKGHKEY 223
           + +NVD+  +   +  Y
Sbjct: 209 TPNNVDIARVAPAYHLY 225


>Medtr0167s0060.2 | 20S proteasome alpha subunit E1 | HC |
           scaffold0167:34636-27853 | 20130731
          Length = 235

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 15/189 (7%)

Query: 37  TGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDM 96
           +G T +G+   +GV++ A  +     +V + + +KI  + PNI    +G   D   +   
Sbjct: 31  SGQTSLGIKAANGVVI-ATEKKLPSILVDEASVQKIQLLTPNIGVVYSGMGPDFRVLVR- 88

Query: 97  VSSQLQLHRYHTGRESRVVTALTLLKRHL------FNYQGHVS---AALVLGGVDITGPH 147
             S+ Q  +YH  R  +    +T L R +      F   G V     +L++ G D  GP 
Sbjct: 89  -KSRKQAEQYH--RLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQ 145

Query: 148 LHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLGS 207
           L+ + P GS  +   + MG     A +  E +Y + +  D+ V   +  +  G F    S
Sbjct: 146 LYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEG-FEGQIS 204

Query: 208 GSNVDVCVI 216
             N+++ +I
Sbjct: 205 AKNIEIGII 213


>Medtr0167s0060.1 | 20S proteasome alpha subunit E1 | HC |
           scaffold0167:34688-27798 | 20130731
          Length = 235

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 15/189 (7%)

Query: 37  TGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDM 96
           +G T +G+   +GV++ A  +     +V + + +KI  + PNI    +G   D   +   
Sbjct: 31  SGQTSLGIKAANGVVI-ATEKKLPSILVDEASVQKIQLLTPNIGVVYSGMGPDFRVLVR- 88

Query: 97  VSSQLQLHRYHTGRESRVVTALTLLKRHL------FNYQGHVS---AALVLGGVDITGPH 147
             S+ Q  +YH  R  +    +T L R +      F   G V     +L++ G D  GP 
Sbjct: 89  -KSRKQAEQYH--RLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQ 145

Query: 148 LHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLGS 207
           L+ + P GS  +   + MG     A +  E +Y + +  D+ V   +  +  G F    S
Sbjct: 146 LYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEG-FEGQIS 204

Query: 208 GSNVDVCVI 216
             N+++ +I
Sbjct: 205 AKNIEIGII 213


>Medtr7g070070.1 | 20S proteasome subunit alpha | HC |
           chr7:25826277-25825525 | 20130731
          Length = 250

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 40  TIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS 99
           T +G++ +DGV+L  + + T   +    + EK++ +  ++ C  AG  +D   + +  ++
Sbjct: 33  TAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILIN--TA 90

Query: 100 QLQLHRYHTGRE-----SRVVTALTLLKRHLFNYQG--HVSAALVLGGVDIT-GPHLHTI 151
           ++Q  RY    +      ++V +L   K+    + G      + +  G D   G  L+  
Sbjct: 91  RIQAQRYSFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMS 150

Query: 152 YPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAI 197
            P G+      + +G+ + AA S+ +  YK+ +TR+E V++ ++ +
Sbjct: 151 DPSGNYGGWKASAIGANNQAAQSILKQDYKDDITREEAVQLALKVL 196


>Medtr6g084450.1 | proteasome subunit beta protein | HC |
           chr6:31625633-31619061 | 20130731
          Length = 232

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 87/186 (46%), Gaps = 4/186 (2%)

Query: 37  TGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDM 96
           TG+++V + ++DG+++ AD   + G  +  K+ E++  +  +     +G  +D + +   
Sbjct: 16  TGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLLGASGEISDFQEIMRY 75

Query: 97  VSSQLQL-HRYHTGRESRVVTALTLLKRHLFNYQGHVSA---ALVLGGVDITGPHLHTIY 152
           +   + + + +  G           L R ++N +   +    +LVLGGV     +L T+ 
Sbjct: 76  LDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKKGQKYLGTVS 135

Query: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLGSGSNVD 212
             G          G G+  A  +   ++ E+LT +EGVK++ + +   ++ D  + + + 
Sbjct: 136 MIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 195

Query: 213 VCVITK 218
           +  IT+
Sbjct: 196 ISKITE 201


>Medtr5g016590.1 | 20S proteasome subunit alpha | HC |
           chr5:5961707-5965480 | 20130731
          Length = 250

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 40  TIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS 99
           T +G++ +DGV+L  + + T   +    + EK++ +  ++ C  AG  +D   + +  ++
Sbjct: 33  TAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILIN--TA 90

Query: 100 QLQLHRYHTGRE-----SRVVTALTLLKRHLFNYQG--HVSAALVLGGVDIT-GPHLHTI 151
           ++Q  RY    +      ++V +L   K+    + G      + +  G D   G  L+  
Sbjct: 91  RIQAQRYSFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMS 150

Query: 152 YPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAI 197
            P G+        +G+ + AA S+ +  YK+ +TR+E V + ++ +
Sbjct: 151 DPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAVNLALKVL 196