Miyakogusa Predicted Gene
- Lj0g3v0141589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0141589.1 Non Characterized Hit- tr|I1NLP1|I1NLP1_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,37.42,6e-18,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; A_tha_TIGR01569: p,CUFF.8642.1
(163 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 274 2e-74
Medtr5g041900.1 | casparian strip membrane protein | HC | chr5:1... 84 5e-17
Medtr8g089300.1 | CASP POPTRDRAFT-like protein | HC | chr8:37100... 81 3e-16
Medtr0097s0070.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 80 7e-16
Medtr7g011090.1 | casparian strip membrane protein | HC | chr7:2... 80 8e-16
Medtr4g081880.1 | casparian strip membrane protein | HC | chr4:3... 80 9e-16
Medtr7g083120.1 | plant integral membrane protein | HC | chr7:31... 74 4e-14
Medtr4g118810.1 | plant integral membrane protein | HC | chr4:49... 70 1e-12
Medtr1g058540.1 | casparian strip membrane protein | HC | chr1:2... 67 8e-12
Medtr7g108130.1 | plant integral membrane protein | HC | chr7:43... 64 4e-11
Medtr4g118800.1 | plant integral membrane protein | HC | chr4:49... 64 4e-11
Medtr1g058560.1 | casparian strip membrane protein | HC | chr1:2... 59 2e-09
Medtr3g064310.1 | CASP POPTRDRAFT-like protein | HC | chr3:28945... 58 4e-09
Medtr2g020060.1 | plant integral membrane protein | HC | chr2:66... 57 6e-09
Medtr2g026530.2 | CASP POPTRDRAFT-like protein | HC | chr2:95933... 51 4e-07
Medtr2g026530.1 | CASP POPTRDRAFT-like protein | HC | chr2:95933... 51 4e-07
Medtr1g058570.1 | casparian strip membrane protein | HC | chr1:2... 50 8e-07
Medtr2g086740.1 | plant integral membrane protein | HC | chr2:36... 49 2e-06
Medtr5g076480.1 | CASP POPTRDRAFT-like protein | HC | chr5:32632... 47 7e-06
>Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0004:83573-81269 | 20130731
Length = 163
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/163 (80%), Positives = 148/163 (90%)
Query: 1 MAKTRWICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSV 60
MAKT ICHLL+RFLAF+ATLSAV+VM +SHE+ASF +SFEAKYTN+PAFKYFVIANS+
Sbjct: 1 MAKTGRICHLLLRFLAFSATLSAVVVMVSSHEKASFFTVSFEAKYTNSPAFKYFVIANSI 60
Query: 61 VTVYGFLVFFLPAESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICD 120
VTVYGF V FLPAESLLWRLVVAMD+V TMLLISSISAAL IA+V K GN+YAAWLPIC
Sbjct: 61 VTVYGFFVLFLPAESLLWRLVVAMDMVLTMLLISSISAALAIAQVAKNGNNYAAWLPICG 120
Query: 121 SVPKFCDQVTGALIAGFIAVIVYMILLLHSIHSVLDPLLLRKT 163
SVPKFC+ +TGAL+A FI VI+Y+ILLLHSIH+VLDPLLLRKT
Sbjct: 121 SVPKFCNHMTGALVASFIGVIIYLILLLHSIHTVLDPLLLRKT 163
>Medtr5g041900.1 | casparian strip membrane protein | HC |
chr5:18399261-18401571 | 20130731
Length = 186
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 7 ICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVY 64
I ++R +A ATL++ + M T+ ER F + F A+Y + P+F +FV+ANS+V Y
Sbjct: 27 IMDFILRIIAGVATLASAVAMGTTDERLPFATSFVQFRAEYDDLPSFVFFVLANSIVCGY 86
Query: 65 GFLVFFLPAESLLWR-------LVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLP 117
L L ++ L++ +D+V LL ++ SAA +I + GN+ A W P
Sbjct: 87 LALSLILSILHIVRSTAVKSRILLIVLDMVMMGLLAAAASAAASIVYIAHYGNTQANWFP 146
Query: 118 ICDSVPKFCDQVTGALIAGFIAVIVYMILLLHS 150
IC FC++++G+LI +IAV +++I++L S
Sbjct: 147 ICQQYNSFCERISGSLIGSYIAVALFIIIILLS 179
>Medtr8g089300.1 | CASP POPTRDRAFT-like protein | HC |
chr8:37100964-37099766 | 20130731
Length = 194
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 17/169 (10%)
Query: 3 KTRWICHLLVRFLAFAATLSAVIVMATSHERASF---------LAISFEAKYTNTPAFKY 53
K WI L +R +AF A +SA +VM+ + + +F + + AK+ +TPAF Y
Sbjct: 22 KKDWIL-LSLRVVAFLAAVSATLVMSLNKQTKTFVVATIGSTPITVPLTAKFQHTPAFVY 80
Query: 54 FVIANSVVTVYGFLVFFL----PA---ESLLWRLVVAMDLVFTMLLISSISAALTIAEVG 106
FV+ N +V+++ ++ + P + L L+ D + L S AA ++E+G
Sbjct: 81 FVVPNGIVSLHNLVMIAMYILGPKFHNKGLQLALIAVFDTMALALASSGDGAATAMSELG 140
Query: 107 KKGNSYAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHSIHSVL 155
+ GNS+A W ICD +C++ G+LIA FI +I+ +I+ + SI+ +L
Sbjct: 141 RNGNSHAKWNKICDKFESYCNRGGGSLIASFIGLILLLIITVMSINKLL 189
>Medtr0097s0070.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0097:39509-37693 | 20130731
Length = 201
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 19/172 (11%)
Query: 3 KTRWICHLLVRFLAFAATLSAVIVMATSHERASF---------LAISFEAKYTNTPAFKY 53
K WI L +R +AF AT +A +VMA + + SF L + AK+ TPAF +
Sbjct: 23 KNDWIL-LSLRVVAFFATAAATLVMALNKQTKSFVIGTVGNTPLTATLSAKFNQTPAFVF 81
Query: 54 FVIANSVVTVYGFLVFFL----PA---ESLLWRLVVAMDLVFTMLLISSISAALT-IAEV 105
FVIAN +++ ++ L P + L L+ +D++ TM L S+ A T ++ +
Sbjct: 82 FVIANGNASLHNLVMIALDILGPQYDYKGLRLALIAILDML-TMALASAGDGAATFMSAL 140
Query: 106 GKKGNSYAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHSIHSVLDP 157
G+ GNS+A W ICD +C++ GALIA FI I+ +I+ + SI +L P
Sbjct: 141 GRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSISKLLKP 192
>Medtr7g011090.1 | casparian strip membrane protein | HC |
chr7:2905231-2907425 | 20130731
Length = 186
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 1 MAKTRWICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIAN 58
M + I ++R +A ATL++ I M T+ E F + F A Y + P ++FV+A+
Sbjct: 21 MKRGVSILDFILRLIAIVATLASAIAMGTTDESLPFFTQFVRFRANYDDLPTLRFFVVAS 80
Query: 59 SVVTVYGFLVF------FLPAESLLWRLV-VAMDLVFTMLLISSISAALTIAEVGKKGNS 111
++V+ Y L + + + + R++ + +D V LL + SAA +I + KGN
Sbjct: 81 AIVSGYLILSLPLSILHIIRSSAGMTRVIFIILDTVMLGLLTAGSSAAASIVYLAHKGNR 140
Query: 112 YAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHS 150
A W C FC++++G+LI FIA+ ++++L+L S
Sbjct: 141 KANWFAFCQQYNSFCERISGSLIGSFIAIPLFIMLILLS 179
>Medtr4g081880.1 | casparian strip membrane protein | HC |
chr4:31869526-31871135 | 20130731
Length = 189
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 1 MAKTRWICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIAN 58
M + I ++R A +TL + + M T+ + F + F+ + + P F +FV AN
Sbjct: 22 MKRGLSIMDFILRIFAAMSTLGSALSMGTAKQTMPFATRFVRFKVSFHDLPTFLFFVTAN 81
Query: 59 SVVTVYG----FLVFFLPAESLLWR---LVVAMDLVFTMLLISSISAALTIAEVGKKGNS 111
S+V Y L FF ++ + L+V +D V LL S SAA I V GN
Sbjct: 82 SIVCGYLALSLVLSFFHIVRTISVKSRILLVFLDTVMFGLLTSGASAAAAIVYVAHYGNP 141
Query: 112 YAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHS 150
A W P C FC +++G+L+ FIAV+++MIL+L S
Sbjct: 142 SANWFPFCQQYNSFCGRISGSLVGSFIAVVIFMILILMS 180
>Medtr7g083120.1 | plant integral membrane protein | HC |
chr7:31937630-31935708 | 20130731
Length = 186
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 3 KTRWICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVT 62
+T + ++R L T +++V T+++ +I FEA + T +FK+FV AN VV
Sbjct: 25 RTFLMVQNILRILVIVLTAVSIVVTVTNNQSVMLFSIRFEAHFYYTSSFKFFVAANGVVC 84
Query: 63 VYGFLVFFL--------PAESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAA 114
L P + L+ +DLV T+LLI+ SAA + VG+ G +
Sbjct: 85 FMSVLTLIFNLLMRQQTPQRKDYYFLLFLVDLVMTVLLIAGCSAATAVGYVGQYGEKHVG 144
Query: 115 WLPICDSVPKFCDQVTGALIAGFIA 139
W ICD V KFC +L+ ++A
Sbjct: 145 WTAICDHVQKFCKTNLISLLLSYLA 169
>Medtr4g118810.1 | plant integral membrane protein | HC |
chr4:49234116-49235835 | 20130731
Length = 200
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 8 CHLLVRFLAFAATLSAVIVMATSHERA----------SFLAISFEAKYTNTPAFKYFVIA 57
C L++RFL F TL+A IV+ T + L ++ AK+ AF YF++A
Sbjct: 33 CELVLRFLGFVLTLAAAIVVGTDKQTTIVPIKVVDSLPPLNVAVSAKWHYLSAFVYFLVA 92
Query: 58 NSVVTVYGFLVFFL-----PAESLLWR-LVVAMDLVFTMLLISSISAALTIAEVGKKGNS 111
N++ YG + L + W L+ D + LL S AA I +G +GNS
Sbjct: 93 NAIACTYGAISMLLTLLNRGKSKVFWGTLITIFDALMVALLFSGNGAATAIGVLGYQGNS 152
Query: 112 YAAWLPICDSVPKFCDQVTGALI 134
+ W +C+ K+C QV ++I
Sbjct: 153 HVRWKKVCNVFDKYCHQVAASII 175
>Medtr1g058540.1 | casparian strip membrane protein | HC |
chr1:25798149-25796910 | 20130731
Length = 196
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 7 ICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVY 64
I ++R A AA+L+A I MATS + F + FEA Y + F++FVIA + V
Sbjct: 37 IMDFVLRLGAIAASLAATITMATSDQILPFFTQFLQFEASYDSFSTFQFFVIAMAFVG-- 94
Query: 65 GFLVFFLP--------AESLLWRL-VVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAW 115
G+LV LP + RL ++ +D VF L +S ++A + + GN + W
Sbjct: 95 GYLVLSLPFSIVTIIRPHAPGPRLFLIILDTVFLTLATASGASAAAMVSLAHNGNQDSNW 154
Query: 116 LPICDSVPKFCDQVTGALIAGFI 138
L IC+ FC Q +GA++A FI
Sbjct: 155 LAICNQFGDFCAQTSGAVVASFI 177
>Medtr7g108130.1 | plant integral membrane protein | HC |
chr7:43972040-43974109 | 20130731
Length = 191
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 3 KTRWICHLLVRFLAFAATLSAVIVMATSHERA--SFLAISFE--AKYTNTPAFKYFVIAN 58
K + +L+R L F TL+A I++ E S+ ++ F+ AK+ A +F++ N
Sbjct: 24 KRSNVLDVLLRVLGFLLTLTATIIVGFGKETKVISYASLQFKVTAKWEYMSAIVFFLVTN 83
Query: 59 SVVTVYGFLVFFLP------AESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSY 112
++ Y + + ++ +DLV LL S+ AA + +G+KGNS+
Sbjct: 84 AIGCSYAAISMVVSTIARTSGNKTALLMITLLDLVIMALLFSANGAAGAVGVLGQKGNSH 143
Query: 113 AAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHSI 151
W+ +C+ +C +T AL+ I V+++L+ HS+
Sbjct: 144 VQWMKVCNVFDAYCRHMTVALVLSIIGSTVFLLLVAHSL 182
>Medtr4g118800.1 | plant integral membrane protein | HC |
chr4:49224515-49222579 | 20130731
Length = 187
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 10 LLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVYGFLVF 69
L++RFL FAA++++V+VM T ++ +L + AK+ +PAF YFV A SV +Y +
Sbjct: 30 LILRFLLFAASVASVVVMVTGNQTV-YLPVPRPAKFRYSPAFVYFVAAFSVAGLYSIITT 88
Query: 70 FLP-----AESLLWRLVVAM---DLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDS 121
F+ +L +L++ + D V +L S+ A ++A +G KGN + W IC
Sbjct: 89 FISLSAIRKPNLKTKLLLHLIFWDAVMLGILASATGTAGSVAYLGLKGNKHTDWHKICHI 148
Query: 122 VPKFCDQVTGALIAGFIAVIVYMILL---LHSIHS 153
KFC + ++ G IV ++L+ HSIHS
Sbjct: 149 YDKFCRHIGASVGVGLFGSIVTLLLIWISAHSIHS 183
>Medtr1g058560.1 | casparian strip membrane protein | HC |
chr1:25810191-25808737 | 20130731
Length = 195
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 27 MATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVYGFLVFFLP--------AESL 76
M TS + F FEA Y + PAF++F+IA ++V G+LV LP +
Sbjct: 56 MGTSDQSLPFFTQFFQFEASYDSFPAFQFFLIAMAIVA--GYLVLSLPFSIVAIIRPHAT 113
Query: 77 LWRL-VVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVPKFCDQVTGALIA 135
RL ++ +D VF L +S ++A +I + GN WL IC+ FC Q +GA++A
Sbjct: 114 GPRLFLIILDTVFLTLATASAASAASIVYLAHNGNQDTNWLAICNQFGDFCAQTSGAVVA 173
Query: 136 GFI 138
FI
Sbjct: 174 SFI 176
>Medtr3g064310.1 | CASP POPTRDRAFT-like protein | HC |
chr3:28945240-28941390 | 20130731
Length = 217
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 12 VRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVYGFL---V 68
+R L ++A+++M + E + ++S Y + AF+Y V AN + Y L V
Sbjct: 49 LRLLPIGLCVAALVLMLKNSEENDYGSVS----YNDLGAFRYLVHANGICAGYSLLSAVV 104
Query: 69 FFLPAESLL--WRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVPKFC 126
P +LL W +D V T +++S+ ++++ + + + G+S W C S +FC
Sbjct: 105 VAAPRPTLLRAWTFFF-LDQVLTYIILSAGASSMEVVYLAENGDSATVWNSACGSFGQFC 163
Query: 127 DQVTGALIAGFIAVIVYMILLL 148
+VT ++ F+A+ Y+IL L
Sbjct: 164 HKVTASVAITFVALFCYVILSL 185
>Medtr2g020060.1 | plant integral membrane protein | HC |
chr2:6650859-6647324 | 20130731
Length = 189
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 8 CHLLVRFLAFAATLSAVIVMATSHERASF----------LAISFEAKYTNTPAFKYFVIA 57
C +++R A TL+A +V+ + L + AK+ A+ YFV+A
Sbjct: 23 CSMVLRLCALVLTLTAAVVLVADKQTTVVPVKISDSLPPLDVPVTAKWQYVSAYVYFVVA 82
Query: 58 NSVVTVYGFLVFFLP-----AESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSY 112
N + Y L F + LL LV +D + LL S AA I + +KGNS+
Sbjct: 83 NFIAFAYATLSFVIALANGHKSKLLVTLVTLLDAIMVALLFSGNGAAWAIGVLAEKGNSH 142
Query: 113 AAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLL 148
W +C KFC+Q A + + IV++ L++
Sbjct: 143 VMWNKVCHVFDKFCNQAAAACLISLLGSIVFLSLVM 178
>Medtr2g026530.2 | CASP POPTRDRAFT-like protein | HC |
chr2:9593399-9595933 | 20130731
Length = 181
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 7 ICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVY-- 64
I L++RF+ + AV+++ T + F I +AK+T+ A + V+AN++ Y
Sbjct: 10 ITELVLRFVNLGLGVLAVVLIVTDSQVREFFTIQKKAKFTDMKALVFLVVANAIAAGYSL 69
Query: 65 ------------GFLVFFLPAESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSY 112
G ++F P L W + + D V + ++++SAA A K G
Sbjct: 70 IQGLRCVVSMIKGSVLFNKP---LAWA-IFSCDQVMAYITVAAVSAAAQSAVFAKMGQEQ 125
Query: 113 AAWLPICDSVPKFCDQVTGALIAGFI 138
W+ IC+ KFC+QV L + F+
Sbjct: 126 LQWMKICNMYGKFCNQVGEGLASAFL 151
>Medtr2g026530.1 | CASP POPTRDRAFT-like protein | HC |
chr2:9593399-9595933 | 20130731
Length = 201
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 7 ICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVY-- 64
I L++RF+ + AV+++ T + F I +AK+T+ A + V+AN++ Y
Sbjct: 30 ITELVLRFVNLGLGVLAVVLIVTDSQVREFFTIQKKAKFTDMKALVFLVVANAIAAGYSL 89
Query: 65 ------------GFLVFFLPAESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSY 112
G ++F P L W + + D V + ++++SAA A K G
Sbjct: 90 IQGLRCVVSMIKGSVLFNKP---LAWA-IFSCDQVMAYITVAAVSAAAQSAVFAKMGQEQ 145
Query: 113 AAWLPICDSVPKFCDQVTGALIAGFI 138
W+ IC+ KFC+QV L + F+
Sbjct: 146 LQWMKICNMYGKFCNQVGEGLASAFL 171
>Medtr1g058570.1 | casparian strip membrane protein | HC |
chr1:25816955-25815748 | 20130731
Length = 194
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 27 MATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVYGFLVFFLP--------AESL 76
M TS + F FEA Y + F++FVI+ ++ Y LV LP +
Sbjct: 55 MGTSDQTLPFFTQFFQFEASYDSFTTFQFFVISMAIAASY--LVLSLPFSIVAIIRPHAP 112
Query: 77 LWRL-VVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVPKFCDQVTGALIA 135
RL ++ +D VF L SS +AA +I + GN WL IC+ FC Q +GA++A
Sbjct: 113 GPRLFLIILDTVFLTLATSSAAAAASIVYLAHNGNQDTNWLAICNQFGDFCAQTSGAVVA 172
Query: 136 GFI 138
FI
Sbjct: 173 SFI 175
>Medtr2g086740.1 | plant integral membrane protein | HC |
chr2:36464677-36466663 | 20130731
Length = 220
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 1 MAKTRWICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIAN 58
M K I ++R A A L A ++M T+ + F + F A++ + P FK+FV+AN
Sbjct: 55 MKKGIAILDFILRLGAIGAALGAAVIMGTNEQILPFFTQFLQFHAQWDDFPMFKFFVVAN 114
Query: 59 SVVTVYGFLVFFLP----------AESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKK 108
GFL+ LP A + LV+ +DLV L++++ S+A + +
Sbjct: 115 GAAA--GFLILSLPFSIVCIVRPLAAGPRFLLVI-VDLVLMALVVAAASSAAAVVYLAHN 171
Query: 109 GNSYAAWLPICDSVPKFCDQVTGALIAGFIAVI 141
G+ A W IC FC + A++A F+A +
Sbjct: 172 GSQDANWNAICQQFTDFCQGSSLAVVASFVASV 204
>Medtr5g076480.1 | CASP POPTRDRAFT-like protein | HC |
chr5:32632182-32630106 | 20130731
Length = 209
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 7 ICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVYGF 66
I +R ++A+I+M + E + +++ Y++ AF+Y V AN + Y
Sbjct: 36 IVETFLRLFPICLCVTALIIMLKNSEENEYGSVA----YSDLGAFRYLVHANGICAGYSL 91
Query: 67 ---LVFFLPAESLL---WRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICD 120
++ +P S + W + +D V T +++++ + + + + G A W C
Sbjct: 92 FSAVIVAVPRPSTMPKAWAFFL-LDQVQTYIILAAGAVLTEVLYLAEYGVPTAGWSSACG 150
Query: 121 SVPKFCDQVTGALIAGFIAVIVYMILLLHS 150
S FC ++ +L+ FIAV+ Y++L L S
Sbjct: 151 SFGSFCHKIKASLVITFIAVVCYILLSLIS 180