Miyakogusa Predicted Gene

Lj0g3v0140219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0140219.1 Non Characterized Hit- tr|C5Y4B4|C5Y4B4_SORBI
Putative uncharacterized protein Sb05g021440
OS=Sorghu,35.44,3e-18,seg,NULL; coiled-coil,NULL; Transpos_assoc,NULL;
Transposase_24,Transposase, Ptta/En/Spm, plant,CUFF.8567.1
         (822 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g061300.1 | hypothetical protein | LC | chr5:25477205-2547...   215   2e-55
Medtr6g043310.1 | hypothetical protein | HC | chr6:14988154-1498...   145   1e-34
Medtr6g088780.1 | hypothetical protein | HC | chr6:33900775-3390...   114   3e-25
Medtr1g036210.1 | TNP2, putative | LC | chr1:13247644-13248117 |...    89   1e-17
Medtr3g055517.1 | hypothetical protein | LC | chr3:21839924-2184...    79   1e-14

>Medtr5g061300.1 | hypothetical protein | LC |
           chr5:25477205-25475100 | 20130731
          Length = 326

 Score =  215 bits (547), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/252 (41%), Positives = 153/252 (60%), Gaps = 35/252 (13%)

Query: 462 CLKIHARHHNDRHEVVLDDDGEPIGPTGQIVSDLSHFLGTIARNAKFCPLIYTNFKALVK 521
           C KIHAR   +R EV  +D  +PIGPT ++VSDLS FLGT+ARN+ FCPL YTN+  + +
Sbjct: 59  CKKIHARTFEERVEVTYNDVDQPIGPTKKVVSDLSLFLGTLARNSTFCPLKYTNWSGMPE 118

Query: 522 DNEDLIWGYVNDKYIIPEKGRRAVFSRINDAWRRYKCCTKRNYFLKYSSMKERLKNRPTT 581
            N++ +W Y N K+I+  + R  V + + DAWRRYK   K+++FLKY +M ERLK+RP  
Sbjct: 119 KNKNRVWRYANRKFILSVEARDWVETTVRDAWRRYKYKIKQHHFLKYPNMTERLKHRPPK 178

Query: 582 IPEAHFKQLMTYWRNSTIQSISQTNAKNRAKLKYIHRTGPVNFARIRAQLRATKENGEEV 641
           +P AHF+ L  +W    IQ+++++NA+NRA+LK++HR GP NF+  R +L   +E  E  
Sbjct: 179 VPIAHFRALCEFWSKEPIQALAESNARNRAQLKWLHRMGPQNFSLTREKLSQLQEMVE-- 236

Query: 642 TQPEMFVATRQSRKGKEVDKETQSVIPKLQDSVKNSSESETFQSLFGKEKSGKVHCYGRT 701
                                            K  S++E F+++ GKE+ G++ CYGRT
Sbjct: 237 ---------------------------------KKGSDTEAFKAVMGKERPGRLRCYGRT 263

Query: 702 VTPSMFKRKEEI 713
           VT +  KRK+ I
Sbjct: 264 VTKTSLKRKQVI 275


>Medtr6g043310.1 | hypothetical protein | HC |
           chr6:14988154-14988701 | 20130731
          Length = 149

 Score =  145 bits (367), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 105/151 (69%), Gaps = 16/151 (10%)

Query: 646 MFVATRQSRKGKEVDKETQSVIPKLQDSVKNSSE--SETFQSLFGKEKSGKVHCYGRTVT 703
           MF+ TRQ +KGK +D+ET++ I KLQDS++N S+   + FQ+LFGKEK G+V C+GRT T
Sbjct: 1   MFIETRQPQKGK-IDEETEAAIFKLQDSIQNCSQPPDQAFQTLFGKEKPGRVPCFGRTAT 59

Query: 704 PSMFKRKEEIAAIKKQHSNEMTSV-----------KREMEGLKMLVKSLLLQQNPNFDEE 752
           PSM ++ EEIA IKK +  EMTS+           K+ ME  + L+K +L+QQNPN  E+
Sbjct: 60  PSMLRKNEEIANIKKHYEGEMTSMKERMEAYESLTKKRMEAYESLLKCVLVQQNPNLSED 119

Query: 753 EVNDIMGTALGNENSATPHSSTSNHVRHPEK 783
           +V+++MG ALG  NSA  HSS S HV  PEK
Sbjct: 120 DVDNMMGHALGIANSAAHHSSISTHV--PEK 148


>Medtr6g088780.1 | hypothetical protein | HC |
           chr6:33900775-33901997 | 20130731
          Length = 138

 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 13/122 (10%)

Query: 677 SSESETFQSLFGKEKSGKVHCYGRTVTPSMFKRKEEIAAIKKQHSNEMTSV--------- 727
           S + + FQ+LFGKEK G+V C+GRT TPSM ++ EEIA IKK +  EMTS+         
Sbjct: 13  SFDDQAFQTLFGKEKPGRVLCFGRTATPSMLRKNEEIANIKKHYEGEMTSMKERMEAYES 72

Query: 728 --KREMEGLKMLVKSLLLQQNPNFDEEEVNDIMGTALGNENSATPHSSTSNHVRHPEKCA 785
             K+ ME  + L+K +L+QQNPN  +++V+++MG ALG  NSA  HSS S HV  PEK  
Sbjct: 73  FTKKRMEAYESLLKCVLVQQNPNLSDDDVDNMMGHALGIANSAAHHSSISTHV--PEKFG 130

Query: 786 EE 787
            E
Sbjct: 131 SE 132


>Medtr1g036210.1 | TNP2, putative | LC | chr1:13247644-13248117 |
           20130731
          Length = 140

 Score = 89.4 bits (220), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 19/133 (14%)

Query: 1   MDKEWTKHPRFSKEYINGVQSFLDFAYTKGRPQGDEILCPCTKCRNCCWTTRNVVADHLI 60
           MDKEWTK  R S+EY NG   FLD AYTKG+P G EI  PC                   
Sbjct: 1   MDKEWTKSARESEEYENGPNYFLDHAYTKGKPHGKEIFWPCA-----------------T 43

Query: 61  AKGFLKGYDVWVHHGEPIRRRFPMEIDDDMEDQEYSNDDIGGLLCNTFRSVAXXXXXXXX 120
           + GF KGY+VWV HG  I++   +  D+ M D+    DDI GL    FR VA        
Sbjct: 44  SFGFQKGYNVWVRHGVKIQKLNDIN-DNHMNDENDQVDDIDGLFYERFRGVAQEEYKVNE 102

Query: 121 X-XXXARKFYDLV 132
                A+KF+++V
Sbjct: 103 GPNEDAKKFHNIV 115


>Medtr3g055517.1 | hypothetical protein | LC |
           chr3:21839924-21841100 | 20130731
          Length = 208

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 10/121 (8%)

Query: 675 KNSSESETFQSLFGKEKSGKVHCYGRTVTPSMFKRKEEIAAIKKQHSNEMTSVKREMEG- 733
           K  S++E F+++ GKE+ G++ CYGR +T +  KRK EI A+ + HS E+++++ E +  
Sbjct: 4   KKGSDTEAFKAVMGKERPGRLRCYGRKITKTSLKRKVEINALNQAHSQEVSTLRHEFQDQ 63

Query: 734 ---LKMLVKSLLLQQNPNFDEEEVNDIMGTALGNENS------ATPHSSTSNHVRHPEKC 784
              L+ + K+++ Q NP  + + +  ++G + G+ NS      A  HSSTS H   PEK 
Sbjct: 64  IDRLQNVFKTVIQQCNPQLNMDSIEHLLGLSHGDANSSPKDSRAQMHSSTSIHTPCPEKQ 123

Query: 785 A 785
           A
Sbjct: 124 A 124