Miyakogusa Predicted Gene

Lj0g3v0139839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139839.1 tr|G7J4S2|G7J4S2_MEDTR GRAM domain-containing
protein 1B OS=Medicago truncatula GN=MTR_3g077000
PE=4,89.58,4e-18,C2,C2 calcium-dependent membrane targeting; no
description,NULL; OS08G0492400 PROTEIN,NULL; MCTP-REL,CUFF.8519.1
         (48 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g077000.1 | C2 and GRAM domain plant-like protein | HC | c...    98   1e-21
Medtr4g134190.1 | C2 and GRAM domain plant-like protein | HC | c...    79   9e-16
Medtr2g027360.1 | C2 and GRAM domain plant-like protein | HC | c...    77   3e-15

>Medtr3g077000.1 | C2 and GRAM domain plant-like protein | HC |
           chr3:34574135-34568407 | 20130731
          Length = 1014

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/48 (91%), Positives = 47/48 (97%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           +ESTGLSDPYVV TCNGQTRSSSVKL+TSDPQWNE+LEFDAMEEPPSV
Sbjct: 545 LESTGLSDPYVVFTCNGQTRSSSVKLETSDPQWNEILEFDAMEEPPSV 592


>Medtr4g134190.1 | C2 and GRAM domain plant-like protein | HC |
           chr4:56172974-56177655 | 20130731
          Length = 1022

 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           ++S GL +PYVV TCNG+TRSSS+K Q S+P WNE+ EFDAM++PPSV
Sbjct: 558 VDSGGLCNPYVVFTCNGKTRSSSIKFQKSNPSWNEIFEFDAMDDPPSV 605


>Medtr2g027360.1 | C2 and GRAM domain plant-like protein | HC |
           chr2:9993635-10000488 | 20130731
          Length = 1023

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           ++S G SDPYVV TCNG+ R+SS+K Q S+P WNE+ EFDAM++PPSV
Sbjct: 558 VDSGGYSDPYVVFTCNGKVRTSSIKFQKSNPLWNEIFEFDAMDDPPSV 605