Miyakogusa Predicted Gene

Lj0g3v0139809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139809.1 Non Characterized Hit- tr|I1JXB5|I1JXB5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.64,0.00000000000002, ,CUFF.8516.1
         (44 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g077000.1 | C2 and GRAM domain plant-like protein | HC | c...    69   7e-13

>Medtr3g077000.1 | C2 and GRAM domain plant-like protein | HC |
            chr3:34574135-34568407 | 20130731
          Length = 1014

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query: 1    MWLRSSKFQQRINRNITAKFSVKLKETFELVQKEILLMSQNSH 43
            MWLRSSKFQ+RINRNIT+KF ++L+E FEL+QKEILLMS  S+
Sbjct: 971  MWLRSSKFQKRINRNITSKFKIRLEEIFELLQKEILLMSHKSN 1013