Miyakogusa Predicted Gene
- Lj0g3v0139579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0139579.1 Non Characterized Hit- tr|I3SP01|I3SP01_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED,NULL;
RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM,NULL;,CUFF.8508.1
(119 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g106590.1 | two-component response regulator ARR3-like pro... 147 3e-36
Medtr3g078613.2 | two-component response regulator ARR3-like pro... 146 3e-36
Medtr3g078613.1 | two-component response regulator ARR3-like pro... 146 4e-36
Medtr5g036480.1 | two-component response regulator ARR3-like pro... 121 1e-28
Medtr1g049100.1 | two-component response regulator ARR3-like pro... 121 2e-28
Medtr3g093860.1 | two-component response regulator ARR3-like pro... 109 7e-25
Medtr7g490310.2 | two-component response regulator ARR3-like pro... 103 3e-23
Medtr7g490310.1 | two-component response regulator ARR3-like pro... 103 3e-23
Medtr3g088630.1 | two-component response regulator ARR3-like pro... 101 2e-22
Medtr3g015490.1 | two-component response regulator ARR3-like pro... 101 2e-22
Medtr8g038620.1 | two-component response regulator ARR3-like pro... 96 6e-21
Medtr6g007460.1 | response regulator receiver domain protein | H... 94 3e-20
Medtr2g050020.1 | response regulator, putative | LC | chr2:22984... 57 4e-09
Medtr4g028380.1 | hypothetical protein | LC | chr4:9812978-98148... 47 3e-06
>Medtr4g106590.1 | two-component response regulator ARR3-like
protein | HC | chr4:44212854-44214908 | 20130731
Length = 215
Score = 147 bits (370), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 85/102 (83%), Gaps = 9/102 (8%)
Query: 5 ATGEVFR----RVLEDSD----ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRAL 56
A GE+FR ++E+S ELHVLAVDDSLVDRKVIERLLKISSCKVTVV+S RAL
Sbjct: 3 AAGEIFRSNLTELMEESPSGAGELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRAL 62
Query: 57 QYLGLDGEENSSIGFDGVKVNLIMTDYSMPGMTGYELLKKIK 98
Q+LGLDG ENS + FD VKVNLIMTDYSMPGMTGYELLKKIK
Sbjct: 63 QFLGLDG-ENSDVAFDAVKVNLIMTDYSMPGMTGYELLKKIK 103
>Medtr3g078613.2 | two-component response regulator ARR3-like
protein | HC | chr3:35427921-35430565 | 20130731
Length = 201
Score = 146 bits (369), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/101 (78%), Positives = 86/101 (85%), Gaps = 7/101 (6%)
Query: 3 ATATGEVFRRVLEDSD-----ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQ 57
ATA G+V R+ L + ELHVLAVDDS VDRKVIERLLK +SCKVTVV+SGTRALQ
Sbjct: 2 ATA-GDVLRQSLPEVSGAGVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQ 60
Query: 58 YLGLDGEENSSIGFDGVKVNLIMTDYSMPGMTGYELLKKIK 98
YLGLDG + SSIGFDGVKVN+IMTDYSMPGMTGYELLKKIK
Sbjct: 61 YLGLDG-DTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIK 100
>Medtr3g078613.1 | two-component response regulator ARR3-like
protein | HC | chr3:35427921-35430565 | 20130731
Length = 200
Score = 146 bits (369), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/101 (78%), Positives = 86/101 (85%), Gaps = 7/101 (6%)
Query: 3 ATATGEVFRRVLEDSD-----ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQ 57
ATA G+V R+ L + ELHVLAVDDS VDRKVIERLLK +SCKVTVV+SGTRALQ
Sbjct: 2 ATA-GDVLRQSLPEVSGAGVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQ 60
Query: 58 YLGLDGEENSSIGFDGVKVNLIMTDYSMPGMTGYELLKKIK 98
YLGLDG + SSIGFDGVKVN+IMTDYSMPGMTGYELLKKIK
Sbjct: 61 YLGLDG-DTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIK 100
>Medtr5g036480.1 | two-component response regulator ARR3-like
protein | HC | chr5:15918294-15920037 | 20130731
Length = 237
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 16 DSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL--DGEENSSIGF-D 72
DS E+HVLAVDDSLVDRKVIERLLKIS+CKVT VDSG RALQ+LGL + E + S F
Sbjct: 12 DSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVP 71
Query: 73 GVKVNLIMTDYSMPGMTGYELLKKIKVGVCY 103
G+KV+L++TDY MPGMTGYELLKKIK +
Sbjct: 72 GLKVDLVITDYCMPGMTGYELLKKIKESTTF 102
>Medtr1g049100.1 | two-component response regulator ARR3-like
protein | HC | chr1:18957861-18956301 | 20130731
Length = 197
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 16 DSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGE-ENSSIGFDGV 74
+S+E+HVLAVDDSL+DRKVIERLLKIS+CKVT VDSG RALQ+LGLD + ENS +
Sbjct: 4 NSEEVHVLAVDDSLIDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRENSESDGSPL 63
Query: 75 KVNLIMTDYSMPGMTGYELLKKIK 98
KV+L++TDY MP MTGYELLKKIK
Sbjct: 64 KVDLVITDYCMPEMTGYELLKKIK 87
>Medtr3g093860.1 | two-component response regulator ARR3-like
protein | HC | chr3:42884155-42883125 | 20130731
Length = 156
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 11 RRVLEDSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLD--GEENSS 68
+ V+E+ D HVLAVDD+++DR ++E+LLK SSCKVT ++G +AL+YLGL E+ ++
Sbjct: 9 KWVMENGDIPHVLAVDDNIIDRTLVEKLLKNSSCKVTTAENGLKALEYLGLASGAEQKNT 68
Query: 69 IGFDGVKVNLIMTDYSMPGMTGYELLKKIK 98
+ G KVNLI+TDY MPGMTGYELLKKIK
Sbjct: 69 LENGGPKVNLIITDYCMPGMTGYELLKKIK 98
>Medtr7g490310.2 | two-component response regulator ARR3-like
protein | HC | chr7:35463772-35459164 | 20130731
Length = 239
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 8/88 (9%)
Query: 19 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL--DGEENSSI------G 70
+ HVLAVDDS++DRK+IERLLK SS +VT VDSG++AL++LGL + E N +
Sbjct: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNN 67
Query: 71 FDGVKVNLIMTDYSMPGMTGYELLKKIK 98
V+VNL++TDY MPGMTGY+LLKKIK
Sbjct: 68 HQEVEVNLVITDYCMPGMTGYDLLKKIK 95
>Medtr7g490310.1 | two-component response regulator ARR3-like
protein | HC | chr7:35463772-35459164 | 20130731
Length = 239
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 8/88 (9%)
Query: 19 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL--DGEENSSI------G 70
+ HVLAVDDS++DRK+IERLLK SS +VT VDSG++AL++LGL + E N +
Sbjct: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNN 67
Query: 71 FDGVKVNLIMTDYSMPGMTGYELLKKIK 98
V+VNL++TDY MPGMTGY+LLKKIK
Sbjct: 68 HQEVEVNLVITDYCMPGMTGYDLLKKIK 95
>Medtr3g088630.1 | two-component response regulator ARR3-like
protein | HC | chr3:40031137-40027258 | 20130731
Length = 235
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 68/99 (68%), Gaps = 17/99 (17%)
Query: 17 SDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGF----- 71
+ HVLAVDDS++DR ++ERLL+ SSCKVT VDSG +AL+YLGL+ +E SS
Sbjct: 19 QEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILES 78
Query: 72 ------------DGVKVNLIMTDYSMPGMTGYELLKKIK 98
+G KVNLIMTDY MPGM+GY+LLK++K
Sbjct: 79 SSPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVK 117
>Medtr3g015490.1 | two-component response regulator ARR3-like
protein | HC | chr3:4491270-4492945 | 20130731
Length = 164
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 8/88 (9%)
Query: 19 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL-----DGEENSSIGFDG 73
+ HVLAVDDS++DR +IERLLK SS VTVVDSGT+AL++LGL E+ SI +
Sbjct: 3 QFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAET 62
Query: 74 ---VKVNLIMTDYSMPGMTGYELLKKIK 98
V+VNLI+TDY MPGMTGY+LL+KIK
Sbjct: 63 DQVVEVNLIITDYCMPGMTGYDLLRKIK 90
>Medtr8g038620.1 | two-component response regulator ARR3-like
protein | HC | chr8:14326128-14324370 | 20130731
Length = 177
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
Query: 18 DELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL--------DGEENSSI 69
++ HVLAVDDS++DR +IERLLK SS VT VDS ++AL++LGL D S I
Sbjct: 7 NQFHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDEMRTYDTHVASEI 66
Query: 70 GFDGVKVNLIMTDYSMPGMTGYELLKKIK 98
D V VNLI+TDY MPGMTGY+LL+KIK
Sbjct: 67 NQD-VDVNLIITDYCMPGMTGYDLLRKIK 94
>Medtr6g007460.1 | response regulator receiver domain protein | HC
| chr6:1613053-1614682 | 20130731
Length = 207
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 19 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVNL 78
+ HVLAVDDS++DR +IERLLK SS VT +DS ++AL++LGL + S + D V VNL
Sbjct: 10 QFHVLAVDDSIIDRMLIERLLKTSSFHVTTMDSASKALKFLGLVEDVASEVHGD-VDVNL 68
Query: 79 IMTDYSMPGMTGYELLKKIK 98
I+ DY MPGMTGY+LL+KIK
Sbjct: 69 IIADYCMPGMTGYDLLRKIK 88
>Medtr2g050020.1 | response regulator, putative | LC |
chr2:22984382-22984887 | 20130731
Length = 125
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 5 ATGEVFRRVLEDSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLG 60
A+ + ++E+ D HVLAVDD+++DR ++E+ LK SSCKVT ++ +AL+Y+G
Sbjct: 36 ASDSSSKWMMENGDIPHVLAVDDNIIDRTLVEKHLKNSSCKVTTAENRLKALEYIG 91
>Medtr4g028380.1 | hypothetical protein | LC | chr4:9812978-9814875
| 20130731
Length = 197
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 44 CKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVNLIMTDYSMPGMTGYELLKKIKVGV 101
C VTV ++ G DG +S G KVNL++TD+ MPGM YELLKKIKV +
Sbjct: 38 CCVTVCTGNVKS----GSDG--GTSEPLTGSKVNLVITDHCMPGMRDYELLKKIKVSL 89