Miyakogusa Predicted Gene

Lj0g3v0139249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139249.1 tr|I1MZ35|I1MZ35_SOYBN Arginyl-tRNA--protein
transferase 1 OS=Glycine max PE=3
SV=1,76.98,0,ATE_C,Arginine-tRNA-protein transferase, C-terminal;
seg,NULL; SUBFAMILY NOT NAMED,NULL; ARGININE-TR,CUFF.8469.1
         (554 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g070310.1 | arginyl-tRNA-protein transferase | HC | chr3:3...   825   0.0  

>Medtr3g070310.1 | arginyl-tRNA-protein transferase | HC |
           chr3:31518026-31523211 | 20130731
          Length = 626

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/562 (73%), Positives = 452/562 (80%), Gaps = 20/562 (3%)

Query: 1   MERTCCPSYTIRLKASDFIPSKEQLRVSRRMQRFLDGTLDVKRADLMEDXXXXXXXXXXV 60
           ME+TCCPSYTIRLKASDF+PSKEQLRVSRRMQRFLDGTLDVKR D ME+          V
Sbjct: 77  MEKTCCPSYTIRLKASDFVPSKEQLRVSRRMQRFLDGTLDVKRVDAMEEPNTSNNSESLV 136

Query: 61  HHNFSRPMSEESPG--NQKVNEVEKSLEHLSDQIDNVVHMFNEKGEFPSGTNLPKASVRK 118
           H+N S  MSEESP   N++V+EVEKSL +LSDQIDN VHMF E GEFPSG  LPKASVR 
Sbjct: 137 HNNPSCSMSEESPSVSNKEVDEVEKSLHYLSDQIDNAVHMFTENGEFPSGIQLPKASVRM 196

Query: 119 VSQGKKKLLVNGSEDLLYSSNIAFQLAASINRARASDKDGNDSKPSRDREKDNASSHKVI 178
           VSQGKKK+L NGSEDLLYSSNIAFQ+AASINRA++ DKDGNDSKPSRD +K+N  S K+I
Sbjct: 197 VSQGKKKVLANGSEDLLYSSNIAFQVAASINRAKSRDKDGNDSKPSRDSDKENGFSPKII 256

Query: 179 AEKLVASLIPFLEDSGLSIRACNGHVNFYASSKNVSLNGSVQNAAVPMKSGMKRDIGGNC 238
           AEKLVASL   +  SGLSIRACNGHVNFY SSK VS NG+VQ AA+P KS   R+IGGN 
Sbjct: 257 AEKLVASLDSTVNISGLSIRACNGHVNFYTSSKQVSQNGTVQKAAIPKKSATNRNIGGN- 315

Query: 239 LVSPENCQVKRRKFEIRLNRSSFDPKEFALYVRYQRQVHNDKPQNLTETSYRRFLVDTPL 298
                      RK EIRLNRSSFDP+E+ALY +YQR+VHNDKP+N TE+SYRRFLVDTPL
Sbjct: 316 -----------RKLEIRLNRSSFDPEEYALYRKYQRKVHNDKPENYTESSYRRFLVDTPL 364

Query: 299 LYTPPTGDSTTPPCGFGSFHQQYLIDGQLVAVGVIDILPNCLSSKYLFWDPDFAFLSLGK 358
           +Y   TGD+T PPCGFGSFHQQYL+DG+LVAVGVIDILPNCLSSKYLFWDPDFAFLSLGK
Sbjct: 365 IYVSHTGDNTVPPCGFGSFHQQYLVDGKLVAVGVIDILPNCLSSKYLFWDPDFAFLSLGK 424

Query: 359 YSALQEIGWVKDNQEYCPSLQYYYLGYYIHSCNKMRYKAAYRPSELLCPLRYQWIPFDIA 418
           YSALQEIGWVKDNQ YCPSLQ+YYLGYYIHSCNKMRYKAAYRPSELLCPLRYQW+ FDIA
Sbjct: 425 YSALQEIGWVKDNQAYCPSLQHYYLGYYIHSCNKMRYKAAYRPSELLCPLRYQWVSFDIA 484

Query: 419 RPLLDRMPYAVLSDYSVLQNGDLSLPQVTE--DVMGRQLDDVGQEDANDVPMYXXXXXXX 476
           RPLLDR  Y VLSD S+LQNG+ S  QV E  D M  Q+D+ GQEDANDVPM+       
Sbjct: 485 RPLLDRKRYVVLSDASILQNGESSPFQVAEDQDTMLSQVDESGQEDANDVPMHGDEDEDE 544

Query: 477 XXXXXXXXXX----XXXNTSSVEPENVDVSKVLLGIKGSRARYKDLRSVFGAEQQRYLES 532
                             TS+ EPEN D SKVLLGIKGSR RYKDL+SVFG EQQRYLES
Sbjct: 545 EMVESELESSDDEPDIETTSNGEPENGDFSKVLLGIKGSRVRYKDLQSVFGREQQRYLES 604

Query: 533 QLQKYRRVVGTVLSERMVYSLG 554
           QLQKYRRVVG VLSERMVYSLG
Sbjct: 605 QLQKYRRVVGPVLSERMVYSLG 626