Miyakogusa Predicted Gene

Lj0g3v0138499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0138499.1 Non Characterized Hit- tr|I1J6N1|I1J6N1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,38.46,1e-18,DNA/RNA
polymerases,NULL; DUF2930,Protein of unknown function DUF2930;
RETROVIRUS POLYPROTEIN,NULL; ,CUFF.8423.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0001s0660.1 | zinc-binding alcohol dehydrogenase family pro...    49   3e-06

>Medtr0001s0660.1 | zinc-binding alcohol dehydrogenase family
           protein | HC | scaffold0001:507542-502647 | 20130731
          Length = 461

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 149 WSKGLSKRTQQKSVYERELMALVQAVQRWKHYLMGRHFVIKTDQRSLRFLTDQRLFTDEQ 208
           + + +  R ++ S Y REL A+  AV++W+ YL+G  FVI TD +SL  L  Q + + EQ
Sbjct: 380 FQQAICPRFRRSSTYIRELHAITTAVKKWRQYLLGHPFVIFTDHQSLNELLTQVIQSPEQ 439