Miyakogusa Predicted Gene

Lj0g3v0137419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0137419.1 Non Characterized Hit- tr|I1MNY1|I1MNY1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,76.27,3e-18,
,CUFF.8386.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033525.2 | 5'-3' exonuclease-like protein | HC | chr6:108...    72   1e-13
Medtr6g033525.1 | 5'-3' exonuclease-like protein | HC | chr6:108...    72   1e-13

>Medtr6g033525.2 | 5'-3' exonuclease-like protein | HC |
           chr6:10861768-10857202 | 20130731
          Length = 296

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 73  EKKTGKKRVFFLDVNPLCYEGSKPSMHSFGRWLSLFLS-QVTNNDPVI 119
           E K   KRVFFLDVNPLCYEG+ PS+H F +WL LFLS QVT + PVI
Sbjct: 54  ESKQQSKRVFFLDVNPLCYEGTNPSLHYFAKWLKLFLSHQVTQSHPVI 101


>Medtr6g033525.1 | 5'-3' exonuclease-like protein | HC |
           chr6:10861768-10857202 | 20130731
          Length = 379

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 73  EKKTGKKRVFFLDVNPLCYEGSKPSMHSFGRWLSLFLS-QVTNNDPVI 119
           E K   KRVFFLDVNPLCYEG+ PS+H F +WL LFLS QVT + PVI
Sbjct: 54  ESKQQSKRVFFLDVNPLCYEGTNPSLHYFAKWLKLFLSHQVTQSHPVI 101