Miyakogusa Predicted Gene

Lj0g3v0136939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0136939.1 Non Characterized Hit- tr|I1M0X5|I1M0X5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57604
PE,89.43,0,FRA10AC1 PROTEIN,NULL; ACID PHOSPHATASE-RELATED,NULL;
Fra10Ac1,Folate-sensitive fragile site protein,CUFF.8376.1
         (245 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g037265.1 | folate-sensitive fragile site protein FRA10AC1...   362   e-100

>Medtr8g037265.1 | folate-sensitive fragile site protein FRA10AC1 |
           HC | chr8:13834849-13841481 | 20130731
          Length = 248

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/248 (74%), Positives = 196/248 (79%), Gaps = 3/248 (1%)

Query: 1   MASLGSLKSTIFDREERKQQYQAHIRGLNAYDRHKKFINDYVSFYGKE-KPSNVRLPIKT 59
           M SLGSLKSTIFDREERKQQYQAHI GLNAYDRHKKFINDYV+FYGKE KPS ++LPIKT
Sbjct: 1   MTSLGSLKSTIFDREERKQQYQAHILGLNAYDRHKKFINDYVTFYGKEEKPSTLKLPIKT 60

Query: 60  DQDTLREGYRFIRSEEDDMDPSWEQRLVKRYYDKLFKEYCIADMSQYKSGKIGLRWRTEK 119
           D+DTLREGYRFIRSEEDDMDPSWEQRLVKRYY KLFKEYC+ADMSQYKSGKIGLRWRTEK
Sbjct: 61  DKDTLREGYRFIRSEEDDMDPSWEQRLVKRYYAKLFKEYCLADMSQYKSGKIGLRWRTEK 120

Query: 120 EVISGKGQFICGNKHCDEKDGLASYEVNFCYFEAGENKQALVKLVTCERCARKLNYXXXX 179
           EV+SGKGQF+CGNKHC+EKDGLASYEVNFCYFEAGENKQALVKLV CERCA KLNY    
Sbjct: 121 EVMSGKGQFLCGNKHCNEKDGLASYEVNFCYFEAGENKQALVKLVACERCAGKLNYKRQK 180

Query: 180 XXXX-XXXXXXXXXXXXXXXXXXXXXLDEFQESKERRQKGKRATISPS-XXXXXXXXXXX 237
                                     LDE QES+ERR+KGKRA +S S            
Sbjct: 181 EKEQLEKRQQKHDRRKRSRSKSDDDDLDESQESEERRRKGKRALVSSSDHKIDEDDDNID 240

Query: 238 EYLEGMFP 245
           E+LEGMFP
Sbjct: 241 EFLEGMFP 248