Miyakogusa Predicted Gene
- Lj0g3v0136739.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0136739.1 tr|I0YJ67|I0YJ67_9CHLO
S-adenosyl-L-methionine-dependent methyltransferase (Fragment)
OS=Coccomyxa s,51.49,3e-19,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; DNA_methylase,C-5 cytosine
methyltransfer,gene.g10430.t1.1
(132 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g088715.1 | DNA (cytosine-5)-methyltransferase CMT3-like p... 185 9e-48
Medtr5g066780.1 | DNA (cytosine-5)-methyltransferase CMT3-like p... 177 2e-45
Medtr5g066830.1 | cytosine-C5 specific DNA methylase family prot... 174 2e-44
Medtr7g007090.1 | DNA (cytosine-5)-methyltransferase CMT3-like p... 170 3e-43
Medtr4g017850.1 | DNA (cytosine-5)-methyltransferase CMT1 | HC |... 170 4e-43
Medtr6g084890.1 | DNA (cytosine-5)-methyltransferase CMT3-like p... 168 1e-42
Medtr5g023660.1 | DNA (cytosine-5)-methyltransferase CMT3-like p... 167 2e-42
Medtr5g023660.2 | DNA (cytosine-5)-methyltransferase CMT3-like p... 167 2e-42
Medtr6g037900.1 | DNA (cytosine-5)-methyltransferase CMT1 | HC |... 163 4e-41
Medtr8g071100.1 | DNA (cytosine-5)-methyltransferase | HC | chr8... 135 8e-33
Medtr6g065580.1 | DNA (cytosine-5)-methyltransferase | HC | chr6... 77 3e-15
Medtr2g046020.1 | DNA (cytosine-5)-methyltransferase | HC | chr2... 75 2e-14
Medtr6g088740.1 | hypothetical protein | LC | chr6:33877835-3387... 70 6e-13
>Medtr6g088715.1 | DNA (cytosine-5)-methyltransferase CMT3-like
protein | HC | chr6:33856882-33847397 | 20130731
Length = 935
Score = 185 bits (470), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 100/125 (80%), Gaps = 6/125 (4%)
Query: 14 NALYSYVR-----PFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPD 68
N S+VR PFAR+WWDETVPTVVTR EPHNQ ILHPEQDRVLS+RENARLQGFPD
Sbjct: 806 NYAISFVRGTSPLPFARIWWDETVPTVVTRPEPHNQKILHPEQDRVLSVRENARLQGFPD 865
Query: 69 YYKLCGPVKQRYIQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS-SS 127
+YKLCG VK+RYIQVGNAVAVPV RALGY LGLA QGA DGPLY L D FP S ++
Sbjct: 866 FYKLCGSVKERYIQVGNAVAVPVGRALGYCLGLASQGASTDGPLYTLPDHFPRKKASIAA 925
Query: 128 SEENV 132
S+E V
Sbjct: 926 SDEEV 930
>Medtr5g066780.1 | DNA (cytosine-5)-methyltransferase CMT3-like
protein | HC | chr5:28213679-28216488 | 20130731
Length = 800
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 86/99 (86%)
Query: 22 PFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRYI 81
PFAR+WWD+TVPTVVTRAEPHNQ ILHPEQDRVLSIR NARLQGFPD+YKLCG K+RYI
Sbjct: 683 PFARIWWDKTVPTVVTRAEPHNQKILHPEQDRVLSIRGNARLQGFPDFYKLCGSSKERYI 742
Query: 82 QVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFP 120
QVGNAVAVPV RAL Y LGLA QGA DGPLY L D FP
Sbjct: 743 QVGNAVAVPVGRALRYCLGLASQGASADGPLYTLPDQFP 781
>Medtr5g066830.1 | cytosine-C5 specific DNA methylase family protein
| HC | chr5:28226762-28227340 | 20130731
Length = 192
Score = 174 bits (440), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 86/99 (86%)
Query: 22 PFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRYI 81
PFAR+WWD+TVPTVVTRAEPHNQ ILHPEQDRVLSIR NARLQGFPD+YKLCG K+RYI
Sbjct: 75 PFARIWWDKTVPTVVTRAEPHNQKILHPEQDRVLSIRGNARLQGFPDFYKLCGSSKERYI 134
Query: 82 QVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFP 120
QVGNAVAVPV RAL Y LGLA QGA DGPLY L D FP
Sbjct: 135 QVGNAVAVPVGRALRYCLGLASQGASADGPLYTLPDQFP 173
>Medtr7g007090.1 | DNA (cytosine-5)-methyltransferase CMT3-like
protein | HC | chr7:1342741-1336814 | 20130731
Length = 827
Score = 170 bits (431), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 87/105 (82%), Gaps = 4/105 (3%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
+PF RLWWDE V TVVTRAEPHNQA+LHP+QDRVLSIRENARLQGFPD YKLCGPVKQRY
Sbjct: 712 KPFGRLWWDEIVSTVVTRAEPHNQALLHPDQDRVLSIRENARLQGFPDCYKLCGPVKQRY 771
Query: 81 IQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS 125
+QVGNAVAVPVA ALGYTLGLA G DGPL L P +PS
Sbjct: 772 MQVGNAVAVPVALALGYTLGLAILGHSDDGPLTTL----PFKYPS 812
>Medtr4g017850.1 | DNA (cytosine-5)-methyltransferase CMT1 | HC |
chr4:5644978-5638865 | 20130731
Length = 843
Score = 170 bits (430), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 4/105 (3%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
+PF RLWWDE V TVVTRAEPHNQA++HP+QDRVL+IRENARLQGFPD YKLCGP+K+RY
Sbjct: 728 KPFGRLWWDEIVSTVVTRAEPHNQALIHPKQDRVLTIRENARLQGFPDCYKLCGPIKERY 787
Query: 81 IQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS 125
IQVGNAVAVPV ALGYTLGLA QG GD PL L P +PS
Sbjct: 788 IQVGNAVAVPVGLALGYTLGLALQGRSGDNPLTTL----PFKYPS 828
>Medtr6g084890.1 | DNA (cytosine-5)-methyltransferase CMT3-like
protein | HC | chr6:31944623-31938699 | 20130731
Length = 835
Score = 168 bits (425), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 85/105 (80%), Gaps = 4/105 (3%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
+PF RLWWDE V TVVTRAEPHNQ +LHPEQDRVLSIRENARLQGFPD YKLCGPVKQRY
Sbjct: 720 KPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQDRVLSIRENARLQGFPDCYKLCGPVKQRY 779
Query: 81 IQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS 125
IQVGNAVAVPVA ALGYTLGLA G D PL L P +PS
Sbjct: 780 IQVGNAVAVPVALALGYTLGLAILGLSDDSPLTIL----PFKYPS 820
>Medtr5g023660.1 | DNA (cytosine-5)-methyltransferase CMT3-like
protein | HC | chr5:9395204-9389043 | 20130731
Length = 835
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 85/105 (80%), Gaps = 4/105 (3%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
+PF RLWWDE V TVVTRAEPHNQ +LHPEQDRVLSIRENARLQGFPD YKLCGPVKQRY
Sbjct: 721 KPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQDRVLSIRENARLQGFPDCYKLCGPVKQRY 780
Query: 81 IQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS 125
+QVGNAVAVPVA ALGYTLGLA G D PL L P +PS
Sbjct: 781 MQVGNAVAVPVALALGYTLGLAILGLSDDSPLTTL----PFKYPS 821
>Medtr5g023660.2 | DNA (cytosine-5)-methyltransferase CMT3-like
protein | HC | chr5:9395204-9389055 | 20130731
Length = 830
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 85/105 (80%), Gaps = 4/105 (3%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
+PF RLWWDE V TVVTRAEPHNQ +LHPEQDRVLSIRENARLQGFPD YKLCGPVKQRY
Sbjct: 716 KPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQDRVLSIRENARLQGFPDCYKLCGPVKQRY 775
Query: 81 IQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS 125
+QVGNAVAVPVA ALGYTLGLA G D PL L P +PS
Sbjct: 776 MQVGNAVAVPVALALGYTLGLAILGLSDDSPLTTL----PFKYPS 816
>Medtr6g037900.1 | DNA (cytosine-5)-methyltransferase CMT1 | HC |
chr6:13541009-13535486 | 20130731
Length = 843
Score = 163 bits (413), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
+PF RLWWDE V TVVTRAEPHNQ +LHPEQDRVLSIRENAR+QGFPD YKLCGP K+RY
Sbjct: 728 KPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQDRVLSIRENARIQGFPDCYKLCGPTKERY 787
Query: 81 IQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPS 125
QVGNAVAVPVA ALGYTLGLA G D PL L P +PS
Sbjct: 788 TQVGNAVAVPVALALGYTLGLAILGLSDDKPLTTL----PFKYPS 828
>Medtr8g071100.1 | DNA (cytosine-5)-methyltransferase | HC |
chr8:30158575-30171725 | 20130731
Length = 1011
Score = 135 bits (341), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 70/84 (83%)
Query: 21 RPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
RPF RLWWDETVPT +T HNQ ++HPEQDR+L++RE ARLQGF DYY+ CG VK+RY
Sbjct: 861 RPFGRLWWDETVPTALTSPSCHNQVVIHPEQDRILTVREFARLQGFHDYYRFCGSVKERY 920
Query: 81 IQVGNAVAVPVARALGYTLGLAFQ 104
Q+GNAVAVPV+RALGY LG+A +
Sbjct: 921 RQIGNAVAVPVSRALGYALGIAHR 944
>Medtr6g065580.1 | DNA (cytosine-5)-methyltransferase | HC |
chr6:24285011-24275638 | 20130731
Length = 1553
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 23 FARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
F RL W PT +T +P + HP+QDR+L++RE AR QGFPD Y+ G + ++
Sbjct: 1465 FGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDRYQFYGNIIHKH 1524
Query: 81 IQVGNAVAVPVARALGYTL 99
Q+GNAV P+A ALG L
Sbjct: 1525 RQIGNAVPPPLAFALGTKL 1543
>Medtr2g046020.1 | DNA (cytosine-5)-methyltransferase | HC |
chr2:20167228-20158779 | 20130731
Length = 1579
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 23 FARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 80
F RL W PT +T +P + HP+QDR+L++RE AR QGFPD Y+ G + ++
Sbjct: 1491 FGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDCYQFYGNIIHKH 1550
Query: 81 IQVGNAVAVPVARALGYTLGLA 102
Q+GNAV P+A ALG L A
Sbjct: 1551 RQIGNAVPPPLAFALGTKLKEA 1572
>Medtr6g088740.1 | hypothetical protein | LC |
chr6:33877835-33872395 | 20130731
Length = 145
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 66 FPDYYKLCGPVKQRYIQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPM 121
F + L + +Y+QVGN VAVPVARALGY+LGLA+QG DGPLY L + FP+
Sbjct: 89 FATHNDLLSGFENKYVQVGNVVAVPVARALGYSLGLAYQGVAADGPLYTLPEKFPV 144