Miyakogusa Predicted Gene

Lj0g3v0136329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0136329.1 Non Characterized Hit- tr|I3S4C3|I3S4C3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,75,0.0000000000004,Diaminopimelate epimerase-like,NULL;
PhzC-PhzF,Phenazine biosynthesis PhzF protein; no
description,N,gene.Ljchr0_pseudomol_20120828.path1.gene13636.1
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107220.1 | phenazine biosynthesis PhzC/PhzF family protei...    76   7e-15
Medtr1g072500.1 | phenazine biosynthesis PhzC/PhzF family protei...    74   4e-14
Medtr1g062540.1 | phenazine biosynthesis PhzC/PhzF family protei...    73   7e-14
Medtr1g062500.1 | phenazine biosynthesis PhzC/PhzF family protei...    72   1e-13
Medtr1g072470.1 | phenazine biosynthesis PhzC/PhzF family protei...    71   2e-13
Medtr1g072490.2 | phenazine biosynthesis PhzC/PhzF family protei...    70   5e-13
Medtr1g072490.1 | phenazine biosynthesis PhzC/PhzF family protei...    69   9e-13
Medtr1g062530.1 | phenazine biosynthesis PhzC/PhzF family protei...    66   7e-12

>Medtr4g107220.1 | phenazine biosynthesis PhzC/PhzF family protein
          | HC | chr4:44288037-44292471 | 20130731
          Length = 298

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KKP+KY+V          VDAFTESAFKGNPAAVCLLE+ERDDEWLQA+A
Sbjct: 1  MSKKPMKYYV----------VDAFTESAFKGNPAAVCLLEEERDDEWLQALA 42


>Medtr1g072500.1 | phenazine biosynthesis PhzC/PhzF family protein
          | HC | chr1:32169481-32166295 | 20130731
          Length = 292

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KKPVKY+V          VDAFT+SAFKGNPAAVCLLE+++DDEWLQ VA
Sbjct: 1  MAKKPVKYYV----------VDAFTDSAFKGNPAAVCLLEEDKDDEWLQLVA 42


>Medtr1g062540.1 | phenazine biosynthesis PhzC/PhzF family protein
          | LC | chr1:27358017-27362934 | 20130731
          Length = 301

 Score = 72.8 bits (177), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KKP KY+V          VDAFTE+AFKGNPAAVCLLE+++DDEWLQA+A
Sbjct: 1  MSKKPTKYYV----------VDAFTETAFKGNPAAVCLLEEDKDDEWLQALA 42


>Medtr1g062500.1 | phenazine biosynthesis PhzC/PhzF family protein
          | LC | chr1:27325491-27319297 | 20130731
          Length = 297

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KKPVKY+V          VDAFTE+ FKGNPAAVC LE+++DDEWLQA+A
Sbjct: 1  MAKKPVKYYV----------VDAFTETVFKGNPAAVCFLEEDKDDEWLQALA 42


>Medtr1g072470.1 | phenazine biosynthesis PhzC/PhzF family protein
          | HC | chr1:32158503-32156071 | 20130731
          Length = 299

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M +KPVKY+V          VDAFTE AFKGNPAAVCLL+QE+DDEWLQ +A
Sbjct: 3  MSEKPVKYYV----------VDAFTELAFKGNPAAVCLLDQEKDDEWLQVLA 44


>Medtr1g072490.2 | phenazine biosynthesis PhzC/PhzF family protein
          | HC | chr1:32165521-32163464 | 20130731
          Length = 233

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KK VKY+V          VDAFT+SAFKGNPAAVCLLE+++DDEWLQ+VA
Sbjct: 1  MAKKHVKYYV----------VDAFTDSAFKGNPAAVCLLEEDKDDEWLQSVA 42


>Medtr1g072490.1 | phenazine biosynthesis PhzC/PhzF family protein
          | HC | chr1:32165650-32163306 | 20130731
          Length = 293

 Score = 68.9 bits (167), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KK VKY+V          VDAFT+SAFKGNPAAVCLLE+++DDEWLQ+VA
Sbjct: 1  MAKKHVKYYV----------VDAFTDSAFKGNPAAVCLLEEDKDDEWLQSVA 42


>Medtr1g062530.1 | phenazine biosynthesis PhzC/PhzF family protein
          | LC | chr1:27350463-27347414 | 20130731
          Length = 237

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 10/52 (19%)

Query: 1  MEKKPVKYHVHCTESEFGMQVDAFTESAFKGNPAAVCLLEQERDDEWLQAVA 52
          M KK VKY+           VDAFTE+AFKGNPAAVC LE+++DDEWLQ++A
Sbjct: 1  MAKKHVKYY----------GVDAFTETAFKGNPAAVCFLEEDKDDEWLQSLA 42