Miyakogusa Predicted Gene
- Lj0g3v0135969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0135969.1 Non Characterized Hit- tr|A5BPZ4|A5BPZ4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.97,0,MULE,MULE transposase domain; SWIM,Zinc finger, SWIM-type;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAME,gene.g10400.t1.1
(515 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g051425.1 | FAR1 DNA-binding domain protein | HC | chr6:17... 125 1e-28
Medtr6g090505.1 | FAR1 DNA-binding domain protein | HC | chr6:34... 101 2e-21
Medtr0558s0020.1 | FAR1 DNA-binding domain protein | HC | scaffo... 100 3e-21
Medtr8g446020.1 | FAR1-related sequence protein, putative | HC |... 99 7e-21
Medtr6g022070.1 | hypothetical protein | LC | chr6:7671087-76698... 79 1e-14
Medtr1g086270.1 | far-red impaired response protein, putative | ... 77 4e-14
Medtr7g446510.1 | hypothetical protein | LC | chr7:15863528-1586... 70 5e-12
Medtr7g446480.1 | hypothetical protein | LC | chr7:15845592-1584... 67 5e-11
Medtr1g070355.1 | FAR1 DNA-binding domain protein | LC | chr1:31... 65 2e-10
Medtr1g083640.1 | FAR1 DNA-binding domain protein | HC | chr1:37... 63 5e-10
Medtr4g035820.1 | FAR1 DNA-binding domain protein | LC | chr4:12... 59 1e-08
Medtr7g446520.1 | FAR1 DNA-binding domain protein | LC | chr7:15... 54 3e-07
Medtr5g039760.1 | FAR1 DNA-binding domain protein | LC | chr5:17... 52 1e-06
Medtr0337s0040.1 | hypothetical protein | HC | scaffold0337:7635... 52 1e-06
Medtr0337s0060.1 | hypothetical protein | HC | scaffold0337:1265... 52 2e-06
>Medtr6g051425.1 | FAR1 DNA-binding domain protein | HC |
chr6:17965556-17964534 | 20130731
Length = 340
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 89/130 (68%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
+ + GG + +G T KD+ N + +++ K ++ G+A +L+++ +++Q ++ F+Y +QLD
Sbjct: 162 LGEEVGGFDKLGMTMKDVHNFVYTEKSKLIKGGDAQSLINHLQNRQAQDAMFYYSVQLDQ 221
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPLAPFIGFNHHRESVLFGAALL 120
+S++TN+FW D K VDY FGDVV FDTTYRTN APF+G HH ++V+FG LL
Sbjct: 222 ESRLTNVFWRDGKSKVDYDCFGDVVVFDTTYRTNTYDLICAPFVGVIHHLQNVMFGCVLL 281
Query: 121 YDETAESFGW 130
DET+ FG+
Sbjct: 282 SDETSCVFGF 291
>Medtr6g090505.1 | FAR1 DNA-binding domain protein | HC |
chr6:34400401-34402867 | 20130731
Length = 364
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
M + GG EN+ D+ N+L + R KEM GEA + +F+++ PSF+Y+IQ+D
Sbjct: 131 MGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGEATIIQEFFRNEALSKPSFYYDIQVDA 190
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPLAPFIGFNHHRESVLF----- 115
IT+IF A+ M +DY+ FGDV+ FDTTYRTN RPL F+++ + ++
Sbjct: 191 AEDITSIFLANGIMQLDYSLFGDVISFDTTYRTNNQYRPLDDESDFDYNWDQMMKNCFNG 250
Query: 116 -----GAALLYDETAESFGWLFKTFLKA 138
G + L + +ESF + FL+
Sbjct: 251 RPTSDGLSKLTEILSESFNAFLRGFLQP 278
>Medtr0558s0020.1 | FAR1 DNA-binding domain protein | HC |
scaffold0558:3043-3933 | 20130731
Length = 296
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
+ + GG EN+ D+ N+L + R KEM GEA + +F+++ PSF+Y+IQ+D
Sbjct: 196 IGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGEATIIQEFFRNEALSKPSFYYDIQVDA 255
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPLA 101
I +IFWAD M +DY+ FGDV+ DTTYRTN RPL
Sbjct: 256 AENIASIFWADGIMQLDYSLFGDVISLDTTYRTNNQYRPLG 296
>Medtr8g446020.1 | FAR1-related sequence protein, putative | HC |
chr8:17591916-17592802 | 20130731
Length = 256
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
+ + GG EN+ D+ N+L R KEM GEA + +F+++ PSF+Y+IQ+D
Sbjct: 156 LGQGVGGTENLPFRFSDLKNYLMIIRQKEMVVGEATVIQEFFRNEALSKPSFYYDIQVDA 215
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPLA 101
I +IFWAD M +DY+ FGDV+ FDTTYRTN PL
Sbjct: 216 AEDIASIFWADGIMQLDYSLFGDVISFDTTYRTNNQYLPLG 256
>Medtr6g022070.1 | hypothetical protein | LC | chr6:7671087-7669835
| 20130731
Length = 337
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 155 MAKAIAEVFPESYHRLCLWHLFQNALKNLNHAFKNSDSFAGELRNCIY-NFEYEDDFLNA 213
M AI VFP +H LC HL +NA N+ + F + + C++ +F+ E+ F +
Sbjct: 1 MRNAIRTVFPNDHHHLCAKHLARNAASNIK-----TPQFVPKFKQCMFGDFDIEE-FESR 54
Query: 214 WKSLLDKHNLQENKWMQDLFKKKEKWALVYGRHTFSAGATTTQLSESVNGRLRLYMKSTF 273
W++ + L+ NKW+ +L++K+ + + + TF AG TT E ++ Y+
Sbjct: 55 WENFFGEFGLENNKWIHELYEKRNQCSTAHIWGTFYAGFRTTSRWEGLHSEFGKYVSVLS 114
Query: 274 NVLEFFRNFERLLEDMRYKEIESNY 298
N+++F +F R L RY+EIE++Y
Sbjct: 115 NLIDFLNHFLRWLNYERYREIEADY 139
>Medtr1g086270.1 | far-red impaired response protein, putative | LC
| chr1:38615225-38615594 | 20130731
Length = 109
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 155 MAKAIAEVFPESYHRLCLWHLFQNALKNLNHAFKNSDSFAGELRNCIYNFEYEDDFLNAW 214
M KAI+ PE++H LC WH+ +NAL+++NH ++ S F + CI E E +F +AW
Sbjct: 1 MTKAISLTMPETFHGLCTWHIRENALRHVNHLYQRSPKFCSDFEACIDLHEEESEFFSAW 60
Query: 215 KSLLDKHNLQENKWMQDLFK 234
LL +HN+ ++ W+ +F+
Sbjct: 61 DGLLVEHNVPDDSWLHTIFR 80
>Medtr7g446510.1 | hypothetical protein | LC |
chr7:15863528-15861541 | 20130731
Length = 333
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
M Q GG VG T KD+ N+ K +++G+ Y L+Y K + +P F
Sbjct: 221 MVAQKGGYLGVGFTKKDLYNYFDKKMCVVIKDGDIYAALNYLNVKSSTDPHSFGVYFSTD 280
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPLAPFIGFNHH 109
D ++ FWAD DY FGDVV F+T Y+ NK L G NHH
Sbjct: 281 DGRLKCPFWADGTSRSDYFCFGDVVAFNTMYKKNKYKYLLVILSGCNHH 329
>Medtr7g446480.1 | hypothetical protein | LC |
chr7:15845592-15844432 | 20130731
Length = 318
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
M Q GG VG T KD+ N+ K +++G+ Y L+Y K + +P F
Sbjct: 206 MVAQKGGYLGVGFTKKDLYNYFDKKMCVVIKDGDIYAALNYLNVKSSTDPHSFGVYFSTD 265
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNKNLRPLAPFIGFNHH 109
D ++ FWAD DY FGDVV F+T Y+ NK L G NHH
Sbjct: 266 DGRLKCPFWADGTSRSDYFCFGDVVAFNTMYKKNKYKYLLVILSGCNHH 314
>Medtr1g070355.1 | FAR1 DNA-binding domain protein | LC |
chr1:31110429-31113072 | 20130731
Length = 567
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
++ Q+GG E +G KDI N + +R+ + +G+ L Y + + FY +D
Sbjct: 217 LANQSGGYEKIGFRKKDIYNQIGKQRLLKRCDGK--NALQYLHGLASNDSLMFYRHTVDG 274
Query: 61 DSQITNIFWADAKMVVDYAYFGDVVCFDTTYRTNK 95
+ ++ ++FW D +DY +GDV+ FD TY TNK
Sbjct: 275 EGRLEHLFWCDGISQMDYGAYGDVLAFDATYGTNK 309
>Medtr1g083640.1 | FAR1 DNA-binding domain protein | HC |
chr1:37222153-37223013 | 20130731
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
+ + GG EN+ D+ N+L + R KEM GEA + +F+++ PSF+Y+IQ+D
Sbjct: 211 LGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGEATVIQEFFRNEALSKPSFYYDIQVDA 270
Query: 61 DSQITNIFWADA 72
I +IFWAD
Sbjct: 271 AEDIASIFWADG 282
>Medtr4g035820.1 | FAR1 DNA-binding domain protein | LC |
chr4:12632859-12628018 | 20130731
Length = 668
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 14 TAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDVDSQITNIFWADAK 73
T KDI N L K K++E + LL Y + + + F Y LD + ++ +IFW+ A
Sbjct: 234 TEKDIRN-LYVKANKKIEGSDVMDLLKYCEGAKKTSSKFQYAYTLDEERRLEHIFWSSAS 292
Query: 74 MVVDYAYFGDVVCFDTTYRTNKNLRPLAPFIGFNHHRESVL---FGAALLYDETAESFGW 130
Y +GDVV FDTTY+ N P F G N+ + L F + +ES
Sbjct: 293 CFDWYQKYGDVVVFDTTYKVNSYEMPFGIFCG-NYWALAYLRDHFFGGMTTTGRSESINA 351
Query: 131 LFKTFLKAMCGKNPKTIFTDQDAAMAKAIAEVFPESYHRLCL 172
K F+ N T TD + AI ++ + H + L
Sbjct: 352 FIKRFI------NSHTSLTDFAKQVDVAIDDIKQKEDHDIML 387
>Medtr7g446520.1 | FAR1 DNA-binding domain protein | LC |
chr7:15865725-15863746 | 20130731
Length = 334
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 4 QAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDVDSQ 63
Q GG +VG T K + N K +++G+ Y L+Y K + +P F D +
Sbjct: 216 QKGGYPSVGFTKKYLYNCFDKKMHVVIKDGDVYAALNYLNVKSSTDPHSFGVYSSTDDGR 275
Query: 64 ITNIFWADAKMVVDYAYFGDVVCFDTTYRTNK 95
+ +FW D Y FG VV FDTTY+ K
Sbjct: 276 LKCLFWEDGTSKSSYFCFGVVVAFDTTYKKKK 307
>Medtr5g039760.1 | FAR1 DNA-binding domain protein | LC |
chr5:17514846-17514202 | 20130731
Length = 190
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFY 54
M+ AG R NVG T KD+ N++ +KR + M GE L YF+ + ENPSFF+
Sbjct: 127 MNTHAGHRANVGFTKKDVRNYILAKRKRSMAYGEIGCLSQYFQRQLLENPSFFH 180
>Medtr0337s0040.1 | hypothetical protein | HC |
scaffold0337:7635-8436 | 20130731
Length = 227
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 1 MSRQAGGRENVGCTAKDISNHLSSKRMKEMEEGEAYTLLHYFKSKQTENPSFFYEIQLDV 60
M + GG +N+ D+ N+L + R KEM GEA + +F+++ PSF+Y+IQ+D
Sbjct: 157 MGQGVGGTKNLPFRFSDLKNYLMTIRQKEMVVGEATVIQEFFRNEALSKPSFYYDIQVDA 216
Query: 61 DSQITN 66
I N
Sbjct: 217 AEDICN 222
>Medtr0337s0060.1 | hypothetical protein | HC |
scaffold0337:12659-13668 | 20130731
Length = 239
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 251 GATTTQLSESVNGRLRLYMKSTFNVLEFFRNFERLLEDMRYKEIESNYEMSQKMPSLNM- 309
G TTQLSES N LR +++ +++ FF +F +++ MR E +++ + N
Sbjct: 21 GPKTTQLSESCNAFLRGFLQPDHSLVRFFSHFNIVVQRMRDNHAEFDFKAANTRTKNNYP 80
Query: 310 NILLLKSARDVFTPAIFSLVRAQYEKSCNIVLKV-CNQHADLYEYEVCVFGSTRQHKVTF 368
N L++S +TPA F+ + QY+ S + + + L +E G + VT
Sbjct: 81 NSQLMRSVVIKYTPACFAFIHRQYDLSFKYYYEEDTTKGSALNNFE--DHGRLDERVVTV 138
Query: 369 NPKDQSVECSCQLFQFIGILCSHALRILNHLNIIVVPARYILKRWTKHAR 418
+ + +S CSC+ +Y+LK WT+ R
Sbjct: 139 DIRSKSFSCSCR--------------------------QYVLKHWTRDVR 162