Miyakogusa Predicted Gene

Lj0g3v0134539.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0134539.1 Non Characterized Hit- tr|Q9M2S8|Q9M2S8_ARATH
Putative uncharacterized protein T22E16.170
OS=Arabido,52.58,0.00000000000001,seg,NULL; RAD4 PROTEIN RELATED,NULL;
NUCLEOLAR COMPLEX 2 AND RAD4-RELATED,Uncharacterised protein
fa,CUFF.8234.1
         (483 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033410.1 | Noc2p family protein | HC | chr6:10766619-1075...   530   e-150
Medtr1g110560.1 | nucleolar complex-like protein | HC | chr1:498...   191   2e-48

>Medtr6g033410.1 | Noc2p family protein | HC |
           chr6:10766619-10759405 | 20130731
          Length = 719

 Score =  530 bits (1365), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/469 (61%), Positives = 329/469 (70%), Gaps = 18/469 (3%)

Query: 15  NLQSVLRNKRKLNSKFKRKTSKRDNPDIEENQEGDTNPSNGRNTVGEEIQDTSLDAVFSE 74
           NLQSV RN+RKL SKFKRK SK D  ++EE +E D   +N   TV EEIQD SLDAVFS+
Sbjct: 15  NLQSVERNQRKLKSKFKRKASKGDGHEVEEIEETDVVVTNPSKTVVEEIQDVSLDAVFSD 74

Query: 75  -DDSEVXXXXXXXXXXXXXXXXCAHD-TGSDDENKNYIENTNGGSSLLVQNRDVXXXXXX 132
            D++EV                   D TGSDDEN   IEN NGGSSL  +N ++      
Sbjct: 75  NDETEVLGGDDSDSDGFLEEDSSFADVTGSDDENN--IENDNGGSSLSAKNSEMFAELLK 132

Query: 133 XXXXXXXXXXXDPGFSKFLESYD-LGIGENTDEEMGSDDEERLDRVQPVDDDSAGSWVGK 191
                       PGFSKFL +YD    G ++DEE GSDDE        ++D++A + VGK
Sbjct: 133 KEKKLNKLKEKFPGFSKFLANYDDEDTGLSSDEETGSDDET-------MNDENAQTRVGK 185

Query: 192 PLTSASVDSLCKLVKEQHSLSALTCLINAYRAACHNDSEATRVSGCVSSHGIQKSETFCK 251
            L SASVDSLCKLVKEQ SL ALTCLINAYRAACH+DSE T V G V S+G+Q SE FC 
Sbjct: 186 TLASASVDSLCKLVKEQQSLPALTCLINAYRAACHSDSETTSVIGSVLSNGVQTSEKFCT 245

Query: 252 ILMFTLHEADTIFRKFLGISTSSSKKETILDLKNTPKWLSLRPLVKSYLRSTMFLLNQVT 311
           ILMF LHEAD +FR  L I +SSSKKE +LDLKN  KWLSLRPL+KSYLR+T+FLLNQ+T
Sbjct: 246 ILMFMLHEADNMFRMLLSIPSSSSKKEAVLDLKNKAKWLSLRPLIKSYLRNTVFLLNQIT 305

Query: 312 ESEILTFSICRLRTSIVFLVAFPSXXXXXXXISVHLWATGDGSLSSDSFLIIQDIASVFS 371
           +SEIL+FSICRLR S++FL AFPS       I V LW TGD SLSS SFL+I+DIAS+ S
Sbjct: 306 DSEILSFSICRLRASMIFLAAFPSLLHKLVKICVDLWVTGDTSLSSHSFLMIRDIASMCS 365

Query: 372 SDCLEICVVKMYKAFISHAQVVEQRMFQHIHFLRNSFVELCCLDVQKSSNKAMICVQHLG 431
           S  L+IC VK YKAFI   Q        H +FLRNSFVELC LDVQKSSNKAM C++ LG
Sbjct: 366 SKWLDICFVKTYKAFIGRPQSA------HTNFLRNSFVELCSLDVQKSSNKAMTCIRRLG 419

Query: 432 KILQKGWQTKKKEVVKKICSWQYINCIDLWVTFISANIQDYDLQPLLYM 480
            IL KGWQTKKKEVV KICSWQYINCIDLWV FIS NI DYDLQPLLYM
Sbjct: 420 DILLKGWQTKKKEVVNKICSWQYINCIDLWVAFISENIHDYDLQPLLYM 468


>Medtr1g110560.1 | nucleolar complex-like protein | HC |
           chr1:49889345-49883337 | 20130731
          Length = 731

 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 162/295 (54%), Gaps = 14/295 (4%)

Query: 191 KPLTSASVDSLCKLVKEQHSLSALTCLINAYRAACH------NDSEATRVSGCVSSHGIQ 244
           K +T++ VD  CK +KE  SL+A+  L+ A+R ACH      NDS A           + 
Sbjct: 113 KVITTSMVDLWCKSIKENGSLNAVRSLMRAFRTACHYGDDDENDSTAKL--------SVM 164

Query: 245 KSETFCKILMFTLHEADTIFRKFLGISTSSSKKETILDLKNTPKWLSLRPLVKSYLRSTM 304
            S  F KI++  L+E D I RK L +  S  +KE I++L  T +W +   +VKSYL + +
Sbjct: 165 SSVVFNKIMLTVLNEMDGILRKLLKLPASGGRKEIIMNLMTTKQWRTYGHIVKSYLGNAL 224

Query: 305 FLLNQVTESEILTFSICRLRTSIVFLVAFPSXXXXXXXISVHLWATGDGSLSSDSFLIIQ 364
            +LNQ+T+S++++F++ RL+ S + L AFPS       +S+H W TG G+L   S L ++
Sbjct: 225 HVLNQMTDSQMISFTLHRLKYSSLLLAAFPSLLRKYIKVSLHFWGTGGGALPVVSCLFMR 284

Query: 365 DIASVFSSDCLEICVVKMYKAFISHAQVVEQRMFQHIHFLRNSFVELCCLDVQKSSNKAM 424
           ++     S C++ C   +YKA++ +   V     +HI FL N  +EL  +D+  +   A 
Sbjct: 285 ELCICIGSGCIDDCFKGIYKAYVLNCHFVNAVKLKHIRFLSNCVIELLGVDLPTAYQHAF 344

Query: 425 ICVQHLGKILQKGWQTKKKEVVKKICSWQYINCIDLWVTFISANIQDYDLQPLLY 479
           I ++ L  IL+    TK KE  +K+  W++IN ++LW   I A     D + L Y
Sbjct: 345 IFIRQLAMILRDALNTKTKEAFRKVYEWKFINSLELWTDAIRAYSSQSDFKQLAY 399