Miyakogusa Predicted Gene
- Lj0g3v0133819.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0133819.1 Non Characterized Hit- tr|B9G1H1|B9G1H1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.69,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.8178.1
(74 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g069190.2 | 2-nitropropane dioxygenase-like protein | HC |... 129 8e-31
Medtr3g069190.3 | 2-nitropropane dioxygenase-like protein | HC |... 127 2e-30
Medtr3g069190.1 | 2-nitropropane dioxygenase-like protein | HC |... 127 3e-30
>Medtr3g069190.2 | 2-nitropropane dioxygenase-like protein | HC |
chr3:30980910-30985195 | 20130731
Length = 294
Score = 129 bits (323), Expect = 8e-31, Method: Composition-based stats.
Identities = 58/67 (86%), Positives = 65/67 (97%)
Query: 1 MRELIKKTRTLTDKPFGVGLVLAFPYEENLKVILDEKVAVLQIYWGDCTRELVAKAHAAG 60
+RELIK+TRTLTDKPFG+GLVLAFP+EENLKVILDEKVAVLQ YWGDCT ELVAKAH+AG
Sbjct: 51 LRELIKQTRTLTDKPFGIGLVLAFPHEENLKVILDEKVAVLQTYWGDCTTELVAKAHSAG 110
Query: 61 VKVIPQV 67
VK++PQV
Sbjct: 111 VKIVPQV 117
>Medtr3g069190.3 | 2-nitropropane dioxygenase-like protein | HC |
chr3:30980910-30985195 | 20130731
Length = 299
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 65/68 (95%)
Query: 1 MRELIKKTRTLTDKPFGVGLVLAFPYEENLKVILDEKVAVLQIYWGDCTRELVAKAHAAG 60
+RELIK+TRTLTDKPFG+GLVLAFP+EENLKVILDEKVAVLQ YWGDCT ELVAKAH+AG
Sbjct: 51 LRELIKQTRTLTDKPFGIGLVLAFPHEENLKVILDEKVAVLQTYWGDCTTELVAKAHSAG 110
Query: 61 VKVIPQVS 68
VK++PQV
Sbjct: 111 VKIVPQVG 118
>Medtr3g069190.1 | 2-nitropropane dioxygenase-like protein | HC |
chr3:30980910-30985195 | 20130731
Length = 330
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 65/68 (95%)
Query: 1 MRELIKKTRTLTDKPFGVGLVLAFPYEENLKVILDEKVAVLQIYWGDCTRELVAKAHAAG 60
+RELIK+TRTLTDKPFG+GLVLAFP+EENLKVILDEKVAVLQ YWGDCT ELVAKAH+AG
Sbjct: 51 LRELIKQTRTLTDKPFGIGLVLAFPHEENLKVILDEKVAVLQTYWGDCTTELVAKAHSAG 110
Query: 61 VKVIPQVS 68
VK++PQV
Sbjct: 111 VKIVPQVG 118