Miyakogusa Predicted Gene

Lj0g3v0133469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0133469.1 Non Characterized Hit- tr|K4DFD2|K4DFD2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,53.09,0.00000000000001,coiled-coil,NULL; seg,NULL,CUFF.8152.1
         (318 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC | chr2:3...   261   6e-70
Medtr2g075450.1 | hypothetical protein | LC | chr2:31562549-3155...   214   1e-55
Medtr2g075470.2 | plant/T3F20-21 protein, putative | HC | chr2:3...   155   4e-38
Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC ...    80   3e-15
Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC ...    69   7e-12
Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC ...    60   2e-09

>Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC |
           chr2:31567796-31564591 | 20130731
          Length = 309

 Score =  261 bits (667), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/320 (49%), Positives = 192/320 (60%), Gaps = 22/320 (6%)

Query: 5   RNLLCRRLHSLLNPKTSHPLTFKFPHRPIASSVALEPQTEQNQKPPLSTFFLEAVGLSEK 64
           +NLL R      N KT +   F F  RPI+SS        Q  K PLST F E   +S K
Sbjct: 6   KNLLTRHR---FNSKTLNSPIFNFTLRPISSS-------PQQTKKPLSTLFSEL--MSGK 53

Query: 65  TATNXXXXXXXXXXXXXXXPXXXXXXXXXXXXVRSFKEKTKN--MPKKPE--RRSLYSAF 120
           T T                             V++ K+K     +PKK E  +RSLYSAF
Sbjct: 54  TTT----IDEEEEESGVGDVELKKKLNQLTEQVKNSKQKKSKGVIPKKVEIEKRSLYSAF 109

Query: 121 TNKLSPVS-ISSPPRGKDENARREQ-QVKALSPDTLALVEYFYEKGYFKEANFAKGKERF 178
           TN+  P   IS     + +   RE+  V+ LS +T+  + + Y+ GYF++A F     RF
Sbjct: 110 TNQPLPDGVISEKKVVEKKQKMRERFVVEELSVETVMFLYHLYQNGYFEDAKFGYVYGRF 169

Query: 179 DPAWFEKLHALCFIKCASKNFARDNQEIAKWLSGSALKQVAMFGCPSSDRGDVFPAKRLR 238
           +  WFE  +AL ++K A+K FA DN EIAKWLSGSALKQ+ +FGCPS  R DVFPAKRLR
Sbjct: 170 NIGWFETPYALGYVKFAAKKFANDNLEIAKWLSGSALKQMLVFGCPSISRNDVFPAKRLR 229

Query: 239 KFFEVPENTVCSKCTLQQSCMFANQTVWKCDTNTLDLGIVMKVITSYALESVHPQLVVPD 298
           KFFEVPENTVCSKC L++SC F NQ VWKCDTN LDL I +KV+ SYAL  VHPQLVV D
Sbjct: 230 KFFEVPENTVCSKCMLRESCKFVNQNVWKCDTNKLDLEIAVKVVISYALHLVHPQLVVSD 289

Query: 299 EVKKSVNQLLKEVVKLSQTT 318
           EVKKSV+ LL E VKLSQ T
Sbjct: 290 EVKKSVDHLLNEFVKLSQIT 309


>Medtr2g075450.1 | hypothetical protein | LC |
           chr2:31562549-31559979 | 20130731
          Length = 282

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/219 (52%), Positives = 143/219 (65%), Gaps = 5/219 (2%)

Query: 102 EKTKNMPKKPERRSLYSAFTNKLSP---VSISSPPRGKDENARREQQVKALSPDTLALVE 158
           E   +  KKP+R SLYS FT++ +P   V  +     K +N +     K LS D +  ++
Sbjct: 50  EGNIDTKKKPKRMSLYSLFTDEPAPDHSVISTQNVVEKKQNKKEPFVAKELSVDMVMFLK 109

Query: 159 YFYEKGYFKEANFAKGKERFDPAWFEKLHALCFIKCASKNFARDNQEIAKWLSGSALKQV 218
           + Y+ GYFK+A F+K   RF   WF K +AL + K A+  FA DN +IA+WLSGSALKQV
Sbjct: 110 HLYQNGYFKDAKFSKFSTRFQLVWFNKQYALGYAKFAAMKFATDNPQIAEWLSGSALKQV 169

Query: 219 AMFGCPSSDRGDVFPAKRLRKFFEVPENTVCSKCTLQQSCMFANQTVWKCDTNTLDLGIV 278
           A+FGCP   R  VFPAKRLRK  EVPENTVCSKC L++SC F N+ V  CD   LDL  V
Sbjct: 170 AVFGCPFIGRNGVFPAKRLRKCLEVPENTVCSKCMLRESCKFVNENVSGCD--KLDLNDV 227

Query: 279 MKVITSYALESVHPQLVVPDEVKKSVNQLLKEVVKLSQT 317
           MKVI  YAL  + PQLVV DE+ KSVN LL E VKLSQ+
Sbjct: 228 MKVIIPYALHWMDPQLVVSDELNKSVNHLLNEFVKLSQS 266


>Medtr2g075470.2 | plant/T3F20-21 protein, putative | HC |
           chr2:31567796-31564796 | 20130731
          Length = 238

 Score =  155 bits (393), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/249 (43%), Positives = 136/249 (54%), Gaps = 22/249 (8%)

Query: 5   RNLLCRRLHSLLNPKTSHPLTFKFPHRPIASSVALEPQTEQNQKPPLSTFFLEAVGLSEK 64
           +NLL R      N KT +   F F  RPI+SS        Q  K PLST F E   +S K
Sbjct: 6   KNLLTRHR---FNSKTLNSPIFNFTLRPISSS-------PQQTKKPLSTLFSEL--MSGK 53

Query: 65  TATNXXXXXXXXXXXXXXXPXXXXXXXXXXXXVRSFKEKTKN--MPKKPE--RRSLYSAF 120
           T T                             V++ K+K     +PKK E  +RSLYSAF
Sbjct: 54  TTT----IDEEEEESGVGDVELKKKLNQLTEQVKNSKQKKSKGVIPKKVEIEKRSLYSAF 109

Query: 121 TNKLSPVS-ISSPPRGKDENARREQ-QVKALSPDTLALVEYFYEKGYFKEANFAKGKERF 178
           TN+  P   IS     + +   RE+  V+ LS +T+  + + Y+ GYF++A F     RF
Sbjct: 110 TNQPLPDGVISEKKVVEKKQKMRERFVVEELSVETVMFLYHLYQNGYFEDAKFGYVYGRF 169

Query: 179 DPAWFEKLHALCFIKCASKNFARDNQEIAKWLSGSALKQVAMFGCPSSDRGDVFPAKRLR 238
           +  WFE  +AL ++K A+K FA DN EIAKWLSGSALKQ+ +FGCPS  R DVFPAKRLR
Sbjct: 170 NIGWFETPYALGYVKFAAKKFANDNLEIAKWLSGSALKQMLVFGCPSISRNDVFPAKRLR 229

Query: 239 KFFEVPENT 247
           KFFEVPENT
Sbjct: 230 KFFEVPENT 238


>Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC |
           chr1:11448862-11445087 | 20130731
          Length = 506

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 14/176 (7%)

Query: 145 QVKALSPDTLALVEYFYEKGYFKEANFAKGKERFDPAWFEKLHALCFIKCASKNFARDNQ 204
           Q+    P+ + L+EY  +KG+F     A+G    +P    K   L  I+ A  NF RD+ 
Sbjct: 59  QISHPWPEWVYLMEYLIKKGHF----HAEGNPFENPPLGAKESNL--IRTACLNFGRDHA 112

Query: 205 EIAKWLSGSALKQVAMFGCPSSDRGDVFPAKRLRKFFEVPENTVCSKCTLQQSCMFANQT 264
            I ++LS   +  +  FGCPS DR  V   KRLR +  + E  VCS C L+  C  A   
Sbjct: 113 HILRFLSRKDIGVIVTFGCPSLDRKVVNSGKRLRAYAGIDEGNVCSSCNLRGDCERAFVK 172

Query: 265 VWKCDTN-TLDLGIVMKVITSYALE----SVHPQLVVPDEVKKSVNQLLKEVVKLS 315
             + +   T+D   VM++I +Y L+    SV  +  +   VK+SV +LLK++V+  
Sbjct: 173 AREDEGGRTVD---VMRIILTYGLDPIIGSVDNKPSLNKMVKESVRRLLKKIVECG 225


>Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC |
           chr7:46680792-46676183 | 20130731
          Length = 886

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 16/140 (11%)

Query: 183 FEKLHALCFIKCASKNFARDNQEIAKWLSGSALKQVAMFGCPSSDRGDVFPAKRLRKFFE 242
           F+ +HA C       NF +D  ++ + LS   ++ +  FGCP+ DR  VF  K LRK   
Sbjct: 177 FKSVHAACL------NFGKDRFDLLRSLSRQDIQVLVGFGCPNVDRKVVFSGKLLRKLVH 230

Query: 243 VPENTVCSKCTLQQSCMFANQTVWKCD-TNTLDLGIVMKVITSYALESVHPQLVV----- 296
           + E  VCS C+L+ +C  A     K D   T+D   +M+++ +   + ++   V+     
Sbjct: 231 LDEGDVCSSCSLRNNCDSAYLLTNKEDEARTID---IMRMLLTLGFDPINGSSVLNKPLL 287

Query: 297 -PDEVKKSVNQLLKEVVKLS 315
               VK  V +LL EVVKLS
Sbjct: 288 KQKSVKAVVRKLLHEVVKLS 307


>Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC |
           chr6:24975567-24969959 | 20130731
          Length = 470

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 21/173 (12%)

Query: 151 PDTLALVEYFYEKGYFKEANFAKGKERFDPAWFEKLHALCFIKCASKNFARDNQEIAKWL 210
           P+ ++ V+    KGY         K   D + +  ++ L   K AS +FARD  ++ K L
Sbjct: 69  PEWISFVDRLRAKGYL-------SKSADDNSVYSDINLL---KDASLSFARDRYDVFKLL 118

Query: 211 SGSALKQVAMFGCPSSDRGDVFPAKRLRKFFEVPENTVCSKCTLQQSCMFANQTVWKCDT 270
           S   ++ V   GCP+  R  V  AKRLR    + E  VCS C L+ SC  A   + + + 
Sbjct: 119 SSEDIQAVVEDGCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEA 178

Query: 271 NTLDLGIVMKVITSYALESVHPQLVVPDE-------VKKSVNQLLKEVVKLSQ 316
           +   + IV +++  YA++   P ++   E       ++ S  +LL ++++LS+
Sbjct: 179 DARTVDIV-RILLFYAID---PLVLSGGEKPPGREVIESSARKLLSQLIELSE 227