Miyakogusa Predicted Gene

Lj0g3v0132869.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0132869.1 Non Characterized Hit- tr|I1JHB9|I1JHB9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50.41,0.00000000000001, ,CUFF.8102.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g070020.1 | myb transcription factor | LC | chr5:29672960-...    49   1e-06

>Medtr5g070020.1 | myb transcription factor | LC |
           chr5:29672960-29670807 | 20130731
          Length = 355

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 39/105 (37%)

Query: 30  PSDSLANEVLFMQQMFKENQNQQSLVNVEASKHNKMASSSASHLAFCQTDIVHDVTECGF 89
           P DS +NE+ F+QQ+  ++ N Q                          ++V DV E   
Sbjct: 287 PYDSFSNELHFIQQILMDDNNNQ--------------------------NVVDDVNESEL 320

Query: 90  AYSFQYPDHNMHLGDNNLLHRETVTPT---NYHPSDLYVSHLLNL 131
            +S QYP++NMHL           TPT   N+ P DLY+S LLN+
Sbjct: 321 VHSIQYPNYNMHLD----------TPTSMNNFLPHDLYLSQLLNM 355