Miyakogusa Predicted Gene

Lj0g3v0131979.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131979.1 tr|G7J2Y0|G7J2Y0_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_3g072140 PE=4
SV=1,51.55,5e-17,seg,NULL,CUFF.8028.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072140.1 | disease resistance protein (TIR-NBS-LRR class)...    62   1e-10
Medtr8g073730.1 | disease resistance protein (TIR-NBS-LRR class)...    59   8e-10
Medtr7g025250.2 | disease resistance protein (TIR-NBS-LRR class)...    57   3e-09
Medtr7g025250.1 | disease resistance protein (TIR-NBS-LRR class)...    57   3e-09
Medtr5g047530.1 | disease resistance protein (TIR-NBS-LRR class)...    57   3e-09
Medtr8g012080.1 | disease resistance protein (TIR-NBS-LRR class)...    57   4e-09
Medtr8g011710.2 | disease resistance protein (TIR-NBS-LRR class)...    55   1e-08
Medtr8g011710.1 | disease resistance protein (TIR-NBS-LRR class)...    55   1e-08
Medtr5g047480.1 | disease resistance protein (TIR-NBS-LRR class)...    55   1e-08
Medtr5g036240.1 | TIR-NBS-LRR class disease resistance protein |...    54   4e-08
Medtr8g012180.3 | disease resistance protein (TIR-NBS-LRR class)...    54   4e-08
Medtr8g012190.1 | disease resistance protein (TIR-NBS-LRR class)...    54   4e-08
Medtr8g012190.2 | disease resistance protein (TIR-NBS-LRR class)...    54   4e-08
Medtr8g012180.2 | disease resistance protein (TIR-NBS-LRR class)...    54   4e-08
Medtr8g012180.1 | disease resistance protein (TIR-NBS-LRR class)...    54   5e-08
Medtr8g012200.1 | disease resistance protein (TIR-NBS-LRR class)...    52   9e-08
Medtr8g020430.1 | disease resistance protein (TIR-NBS-LRR class)...    52   1e-07
Medtr2g437560.1 | disease resistance protein (TIR-NBS-LRR class)...    51   2e-07

>Medtr3g072140.1 | disease resistance protein (TIR-NBS-LRR class),
           putative | LC | chr3:32413650-32409485 | 20130731
          Length = 880

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PTMN LPR+   G+M+ SL SI++                    V +QC S+IQLTQE
Sbjct: 589 MSPTMNSLPRVSTFGNMAFSLTSINVHNVGFLSPVIKSLSQLRT--VWVQCRSKIQLTQE 646

Query: 61  SRRILDDQYDVN 72
            RRIL  QYD N
Sbjct: 647 LRRILGGQYDAN 658


>Medtr8g073730.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:31172985-31178640 | 20130731
          Length = 1084

 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 39/72 (54%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT+N L  I      SLSLVS+D++                   V +QCHSE QLTQE
Sbjct: 764 MSPTINSLSLIHPFAGNSLSLVSLDVESNNMDYQSPMLTVLSKLRCVWVQCHSENQLTQE 823

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 824 LRRFIDDLYDVN 835


>Medtr7g025250.2 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr7:8374668-8370623 | 20130731
          Length = 900

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXX------XXXXXXXXXXVMIQCHSE 54
           M+PT+N LPRIP  G M LSLVS+D++                           +QC S 
Sbjct: 774 MSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSM 833

Query: 55  IQLTQESRRILDDQYDVN 72
           IQLT+E RR LDD YD N
Sbjct: 834 IQLTRELRRFLDDLYDAN 851


>Medtr7g025250.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr7:8374668-8369811 | 20130731
          Length = 1093

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXX------XXXXXXXXXXVMIQCHSE 54
           M+PT+N LPRIP  G M LSLVS+D++                           +QC S 
Sbjct: 774 MSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSM 833

Query: 55  IQLTQESRRILDDQYDVN 72
           IQLT+E RR LDD YD N
Sbjct: 834 IQLTRELRRFLDDLYDAN 851


>Medtr5g047530.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr5:20835586-20840728 | 20130731
          Length = 1047

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 37/72 (51%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT N L  +      SLSLVS+D++                   V  QCHSE QLTQE
Sbjct: 765 MSPTRNSLSHVFPFAGNSLSLVSLDVESNNMDYQSPMVTVLSKLRCVWFQCHSENQLTQE 824

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 825 LRRFIDDLYDVN 836


>Medtr8g012080.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3361057-3366481 | 20130731
          Length = 1126

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXX--XXXXXXXXVMIQCHSEIQLT 58
           ++PTMN LPRIP  G MS SL S+DI                      V +QC SEIQL 
Sbjct: 762 ISPTMNSLPRIPPFGGMSKSLFSLDIDSNNLALVSQSQILNSCSRLRSVSVQCDSEIQLK 821

Query: 59  QESRRILDDQYDVN 72
           QE  R LDD YD  
Sbjct: 822 QEFGRFLDDLYDAG 835


>Medtr8g011710.2 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3309310-3317650 | 20130731
          Length = 908

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXX--XXXXXXXXXVMIQCHSEIQLT 58
           M+P MN L  IP +G MS+SLV +D+                      V +QC SEIQL 
Sbjct: 785 MSPNMNSLAHIPPVGGMSMSLVCLDVDSRNLGLVHQSPILSSYSKLRSVSVQCDSEIQLK 844

Query: 59  QESRRILDDQYDVN 72
           QE RR LDD YD  
Sbjct: 845 QEFRRFLDDIYDAG 858


>Medtr8g011710.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3309299-3320423 | 20130731
          Length = 1137

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXX--XXXXXXXXXVMIQCHSEIQLT 58
           M+P MN L  IP +G MS+SLV +D+                      V +QC SEIQL 
Sbjct: 785 MSPNMNSLAHIPPVGGMSMSLVCLDVDSRNLGLVHQSPILSSYSKLRSVSVQCDSEIQLK 844

Query: 59  QESRRILDDQYDVN 72
           QE RR LDD YD  
Sbjct: 845 QEFRRFLDDIYDAG 858


>Medtr5g047480.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr5:20809273-20814610 | 20130731
          Length = 1024

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 36/72 (50%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT N    I      SLSLVS+D++                   V  QCHSE QLTQE
Sbjct: 765 MSPTRNSQSHIFPFAGNSLSLVSLDVESNNMEYQSPMLTVLSKLRCVWFQCHSENQLTQE 824

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 825 LRRYIDDLYDVN 836


>Medtr5g036240.1 | TIR-NBS-LRR class disease resistance protein | LC
           | chr5:15799895-15805647 | 20130731
          Length = 976

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXX--XXXXXXXXVMIQCHSEIQLT 58
           ++P MN LP IP  G MS SL S+DI+                     V +QC SEIQL 
Sbjct: 617 ISPAMNSLPCIPPFGGMSKSLASLDIESNNLDLVSQSQILNSCSRLRSVSVQCDSEIQLK 676

Query: 59  QESRRILDDQYDVN 72
           QE RR LD+ YD  
Sbjct: 677 QEFRRFLDNLYDAG 690


>Medtr8g012180.3 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3395370-3388199 | 20130731
          Length = 884

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXX--XXXXXXXXVMIQCHSEIQLT 58
           M+PTMN +  I   G MS SL S+DI+                     V +QC SEIQL 
Sbjct: 758 MSPTMNSVAHISPFGGMSKSLASLDIESNNLALVYQSQILSSCSKLRSVSVQCDSEIQLK 817

Query: 59  QESRRILDDQYDVN 72
           QE RR LDD YD  
Sbjct: 818 QEFRRFLDDLYDAG 831


>Medtr8g012190.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3402382-3396425 | 20130731
          Length = 1065

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 35/72 (48%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT N L RI      SLSLVS+  +                   V  QC SE QLTQE
Sbjct: 754 MSPTRNSLSRISPFAGNSLSLVSLHAESNNMDYQSPMLTVLSKLRCVWFQCQSENQLTQE 813

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 814 LRRFIDDLYDVN 825


>Medtr8g012190.2 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3401665-3396425 | 20130731
          Length = 1071

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 35/72 (48%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT N L RI      SLSLVS+  +                   V  QC SE QLTQE
Sbjct: 760 MSPTRNSLSRISPFAGNSLSLVSLHAESNNMDYQSPMLTVLSKLRCVWFQCQSENQLTQE 819

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 820 LRRFIDDLYDVN 831


>Medtr8g012180.2 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3395370-3388199 | 20130731
          Length = 878

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXX--XXXXXXXXVMIQCHSEIQLT 58
           M+PTMN +  I   G MS SL S+DI+                     V +QC SEIQL 
Sbjct: 549 MSPTMNSVAHISPFGGMSKSLASLDIESNNLALVYQSQILSSCSKLRSVSVQCDSEIQLK 608

Query: 59  QESRRILDDQYDVN 72
           QE RR LDD YD  
Sbjct: 609 QEFRRFLDDLYDAG 622


>Medtr8g012180.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3395370-3388199 | 20130731
          Length = 1087

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXX--XXXXXXXXVMIQCHSEIQLT 58
           M+PTMN +  I   G MS SL S+DI+                     V +QC SEIQL 
Sbjct: 758 MSPTMNSVAHISPFGGMSKSLASLDIESNNLALVYQSQILSSCSKLRSVSVQCDSEIQLK 817

Query: 59  QESRRILDDQYDVN 72
           QE RR LDD YD  
Sbjct: 818 QEFRRFLDDLYDAG 831


>Medtr8g012200.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:3411331-3405271 | 20130731
          Length = 1091

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXX--VMIQCHSEIQLT 58
           M+PTMN L RIP  G +S+SLVS++I                      V +QCHSEIQL 
Sbjct: 774 MSPTMNSLARIPSFGGISMSLVSLNIDSDNLGLVYQSPILSSCSKLRCVSVQCHSEIQLK 833

Query: 59  QESRRILDD 67
           QE +  L+D
Sbjct: 834 QELKVFLND 842


>Medtr8g020430.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr8:7167467-7163691 | 20130731
          Length = 976

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT+N LPR    G++SLSL S DI                    V +QC S++QLTQE
Sbjct: 741 MSPTLNSLPRTSPFGNISLSLSSTDIHNNNLGFLSPMIRSLSKLRTVWVQCRSKVQLTQE 800

Query: 61  SRRILDDQYDVN 72
             RIL +Q DVN
Sbjct: 801 LLRIL-NQCDVN 811


>Medtr2g437560.1 | disease resistance protein (TIR-NBS-LRR class) |
           LC | chr2:14770842-14765262 | 20130731
          Length = 1034

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXX---XXXXXXXXXXVMIQCHSEIQL 57
           M+PTM  LPRIP    M LS VS+D++                        +QCHS+IQL
Sbjct: 737 MSPTMTSLPRIPPFRDMPLSHVSLDVENNNNLGLSCLLPKLNSLSKLRSFQVQCHSKIQL 796

Query: 58  TQESRRILDDQYDVN 72
           T+E  R +DD +D N
Sbjct: 797 TRELTRFIDDLHDAN 811