Miyakogusa Predicted Gene

Lj0g3v0131939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131939.2 Non Characterized Hit- tr|G6FZU7|G6FZU7_9CYAN
Putative uncharacterized protein OS=Fischerella sp.
JS,52.58,4e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.8231.2
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g134910.1 | cysteine sulfinate desulfinase/cysteine desulf...   277   6e-75

>Medtr4g134910.1 | cysteine sulfinate desulfinase/cysteine
           desulfurase and-related enzyme, putative | HC |
           chr4:56554825-56547016 | 20130731
          Length = 264

 Score =  277 bits (708), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 143/193 (74%), Positives = 156/193 (80%), Gaps = 13/193 (6%)

Query: 36  NPNFNAFSVSLSQQHRRLGGYWNKTASKPFFPRRTWLYGH--MKRDQDRHTPDYELENGL 93
           NPNFNAFS +LS          +    +    R T  YGH  M RDQD   PDY+ +NG 
Sbjct: 45  NPNFNAFSSTLSAS-------LSPKPKQSLSTRTTCHYGHNNMNRDQD---PDYQFQNGP 94

Query: 94  GLFGSDEQRGTQIPTQAQSLVEGPGAIRVAEYKPVPDVDYLQELLAIQQQGPRAIGFFGT 153
           GLF SDE+R TQIPTQ Q++VEG G+IRV++Y P PDVDYLQELLAIQQQGPRAIGFFGT
Sbjct: 95  GLFDSDEER-TQIPTQVQTMVEGSGSIRVSDYNPAPDVDYLQELLAIQQQGPRAIGFFGT 153

Query: 154 RNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPDFLTVILPQSLSK 213
           RNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKP+ LTVILPQSLSK
Sbjct: 154 RNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLSK 213

Query: 214 QPPESQELLSKVR 226
           QPPESQELLSKV+
Sbjct: 214 QPPESQELLSKVK 226