Miyakogusa Predicted Gene

Lj0g3v0131529.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131529.1 Non Characterized Hit- tr|I1JXG4|I1JXG4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.48,0,Elongator
protein 3, MiaB family, Radical SA,Elongator protein 3/MiaB/NifB;
Radical_SAM,Radical SAM;,CUFF.7995.1
         (485 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g075110.1 | oxygen-independent coproporphyrinogen III oxid...   763   0.0  

>Medtr3g075110.1 | oxygen-independent coproporphyrinogen III
           oxidase, putative | HC | chr3:34123741-34125819 |
           20130731
          Length = 481

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/490 (76%), Positives = 423/490 (86%), Gaps = 14/490 (2%)

Query: 1   MLKSTFSPIFWVLAPKPKYPKLSPHAITNTFSNRTPVVRHNSSMKH-PIITAPLPSSAYI 59
           MLKSTF+PIF  LAPKPK    S   ITNTFSN T  VR NSS+K+ P IT   PSSAYI
Sbjct: 1   MLKSTFTPIFCALAPKPK---PSTRVITNTFSNSTSTVRQNSSLKNNPTIT---PSSAYI 54

Query: 60  HLPFCRKRCHYCDFTIIALGSAASTQTDNDPRVLNYIQWLCREINATEVEE---VSKTPL 116
           HLPFCRKRCHYCDF I+ALGSA STQT +DPRV+NYIQWLCREINAT++E+    +KTPL
Sbjct: 55  HLPFCRKRCHYCDFPIVALGSA-STQTHDDPRVINYIQWLCREINATKIEDELDSAKTPL 113

Query: 117 QTVYFGGGTPSLVPPSMVSLVMESLRKKFGLSEDAEISMEMDPGTFDAKKMREMMLLGVN 176
           +TV+FGGGTPSLVPPSMV  V+E+L+ KFG+SE AEISMEMDPGTFD KKM EMMLLGVN
Sbjct: 114 KTVFFGGGTPSLVPPSMVGTVLETLKMKFGVSESAEISMEMDPGTFDYKKMEEMMLLGVN 173

Query: 177 RVSLGVQAFQEKLLMTCGRAHGVKEVYEAIDIVKSCGVENWSMDLIASLPHQTLDMWEES 236
           RVSLGVQAFQEKLL +CGRAHG++EV+EAIDIVK CGVENWS+DLIASLPHQT +MWEES
Sbjct: 174 RVSLGVQAFQEKLLKSCGRAHGLEEVHEAIDIVKKCGVENWSIDLIASLPHQTSEMWEES 233

Query: 237 LRLTIEAQPNHVSVYDLQIEQGTKFARQYSPGEFPLPSETQSADFYKMASRRLYEASYNH 296
           LRL IEA+P HVSVYDLQIEQGTKF R YSPGEFPLPSETQSADFY MASR L +A+Y+H
Sbjct: 234 LRLAIEARPTHVSVYDLQIEQGTKFGRLYSPGEFPLPSETQSADFYTMASRMLRDANYSH 293

Query: 297 YEISSYCKSGYESKHNFTYWENKPFYGFGLGSASFIGGLRFSRPKKVNDYVSYVQNLENG 356
           YEISSYCKSGYE +HNFTYW+ KPFY FGLGS SFIGGLRFSRP+KVN+Y+ +V+NLENG
Sbjct: 294 YEISSYCKSGYECRHNFTYWKYKPFYAFGLGSTSFIGGLRFSRPRKVNEYMKFVENLENG 353

Query: 357 LVNSSADEDNLVKDRAMDVVMLSLRTSRGLDLKCFQESFGSSVVLSLIEAYKPYFESGHV 416
            VNSS D++   KD+A+DVVMLSLRT+RGLDLK FQESFGSS+VLSL+E YKPY ESGHV
Sbjct: 354 SVNSSIDDNINSKDKALDVVMLSLRTARGLDLKHFQESFGSSLVLSLVEVYKPYVESGHV 413

Query: 417 VCLDEQRRTISIDDDGLSNSLLGKTNTERRLVYLRLSDPEGFLLSNELIALAFGVIDSWK 476
           V LDEQRR + IDD  ++NSLL +T+ ERR+ Y+RLSDP GFLLSNELIALAFGVIDSWK
Sbjct: 414 VFLDEQRRAVRIDD--INNSLLDETDLERRVAYMRLSDPNGFLLSNELIALAFGVIDSWK 471

Query: 477 DCPPC-QEAT 485
           D P   QEAT
Sbjct: 472 DYPSALQEAT 481