Miyakogusa Predicted Gene

Lj0g3v0131519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131519.1 Non Characterized Hit- tr|I1KIG2|I1KIG2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37538
PE,80,0,coiled-coil,NULL; no description,RAP domain; seg,NULL; RAP,RAP
domain; SUBFAMILY NOT NAMED,NULL; FAS,CUFF.8003.1
         (670 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g432340.1 | RAP domain protein | HC | chr8:12222493-122262...   952   0.0  

>Medtr8g432340.1 | RAP domain protein | HC | chr8:12222493-12226265
           | 20130731
          Length = 660

 Score =  952 bits (2462), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/673 (70%), Positives = 546/673 (81%), Gaps = 18/673 (2%)

Query: 1   MEGSLNFLLNQSCLKPFGFTPRLGCTFPVITKTGHLNQKLKSC-TLMTNCSHLGSETYIS 59
           MEG LN L+NQSCLKPFGFTP +G  FPV T+T  LN+KL S  TL  +C+HL  ++  S
Sbjct: 1   MEGLLNSLINQSCLKPFGFTPIVGYNFPVTTRTWRLNRKLDSYNTLRIDCTHLDRDSNAS 60

Query: 60  SRGARLAALXXXXXXXXXXXXXXXXFVGELDPFGYRAPKKRAKEQRSELLKETEEMDWCV 119
           +RG R+AAL                FVGELDPFGYRAPKKR KEQ+S+LL++T+ MDWCV
Sbjct: 61  ARGNRVAALDSGDNGEESDMDWESEFVGELDPFGYRAPKKREKEQKSKLLEDTDGMDWCV 120

Query: 120 RARKMAMKSIEARGMAYAIEDLVTVXXXXXXXXXXXXXXXXXXXXXX--ETEDDLDYNSD 177
           RAR++A+KSI+A+G AYA+EDLVTV                        E ED LDY S+
Sbjct: 121 RAREVALKSIKAKGRAYALEDLVTVKKKKKKKKVEEKVVSKKKTEKKIDEIEDLLDYGSE 180

Query: 178 EDFMLSEAMQPVNDVGDLKTKVSMMANGMFAEKREKTMEEFVNKLSQFSGPSDHRKEFNL 237
           E+F L +  +      DLK +VS++A+GMFAE  EK ME F N+LSQFSG SDHRKE NL
Sbjct: 181 EEFGLPQVKE-----NDLKRQVSLIADGMFAENTEKRMETFYNRLSQFSGISDHRKEINL 235

Query: 238 NKSIVEAQTAEDVLEVTYETISAVMKGLSPSPLSPLNIATSLHRIAKNMEKVSMLQTRRL 297
           NK+I+E+QTA+DVL+VTYETI AV KGLSPSPLSPLNIAT+LHRIAKNMEKVSM++TRRL
Sbjct: 236 NKAIIESQTADDVLDVTYETIVAVAKGLSPSPLSPLNIATALHRIAKNMEKVSMMKTRRL 295

Query: 298 AFARQREMSMLVGIAMTALPECSGQGISNISWALSKIGGELLYHSEMDRVAEVALTKVEE 357
           AFARQ+EMSMLVG+AMTALPECS QGISNI+WALSK+GGELLY SEMDR+AE+ALTKV E
Sbjct: 296 AFARQKEMSMLVGVAMTALPECSAQGISNIAWALSKVGGELLYFSEMDRIAEIALTKVGE 355

Query: 358 FNSQNSANIAGAFAAMQHPAPELFSLLSKRASNIIHTFKEQELAQLLWAFASLFEPADPI 417
            NSQN ANIAGAFA+MQH AP+LF+ LSKRAS IIHTFK QELAQLLWAFASL+EPAD +
Sbjct: 356 LNSQNIANIAGAFASMQHSAPDLFAELSKRASEIIHTFKGQELAQLLWAFASLYEPADIV 415

Query: 418 FDSLDEVFKDHCQLRGFTGEKTSNDYEQNRADRSRDSNGSPGSSVLTLSRDQLATIAWSY 477
           FDSLD +F+DH Q +GF GE+   +        S D NG   S++LTL+RDQL TIAWSY
Sbjct: 416 FDSLDRLFEDHRQSKGFIGEQIGVE--------SVDRNGD--STLLTLNRDQLGTIAWSY 465

Query: 478 AVFGQLNRSFFSYVWKTLSHYEEQKLSELYREDMMFASQVHLVNQCLKLEFPHLQLSLCG 537
           AVFGQ++RSFFSYVWKTL ++EEQ++SELYRED+MFASQVHLVNQCLKLEFPHLQLSLCG
Sbjct: 466 AVFGQMDRSFFSYVWKTLGYFEEQRVSELYREDIMFASQVHLVNQCLKLEFPHLQLSLCG 525

Query: 538 ELEDKVSLAGKTKRFNQKITSSFQKEVGRLLVSTGLEWVKEYVVDGYTLDAVIVDKKLAL 597
           ELEDKVS AGKTKRFNQKITSSFQKEVG LLVSTGLEWVKEYVVDGYTLDAV VDKKLAL
Sbjct: 526 ELEDKVSSAGKTKRFNQKITSSFQKEVGHLLVSTGLEWVKEYVVDGYTLDAVTVDKKLAL 585

Query: 598 EIDGPTHFSRNTGVPLGHTMLKRRYITAAGWDVISVSHQEWEELQGEFEQVEYLKNILKS 657
           EIDGPTHFSRNTGVPLGHT+LKRRYITAAGW ++S+S+QEWEELQG  EQVEYL+ ILK 
Sbjct: 586 EIDGPTHFSRNTGVPLGHTILKRRYITAAGWKLVSLSYQEWEELQGGSEQVEYLREILKD 645

Query: 658 HIDKGYGNTILTE 670
           H+DK Y ++ LTE
Sbjct: 646 HLDKKYDSSTLTE 658