Miyakogusa Predicted Gene

Lj0g3v0131499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131499.1 Non Characterized Hit- tr|B9FX39|B9FX39_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,44.95,7e-19,no
description,NULL; 4HBT,Thioesterase superfamily; Thioesterase/thiol
ester dehydrase-isomerase,NUL,CUFF.7994.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g433000.1 | acyl-CoA thioesterase | HC | chr8:12414302-124...   266   7e-72
Medtr8g032450.1 | acyl-CoA thioesterase | HC | chr8:12169870-121...   266   7e-72
Medtr3g098100.1 | acyl-CoA thioesterase, putative | HC | chr3:44...    74   6e-14
Medtr3g098140.1 | acyl-coenzyme A thioesterase-like protein | LC...    55   4e-08
Medtr8g032430.1 | hypothetical protein | LC | chr8:12180628-1218...    55   4e-08
Medtr3g098130.1 | acyl-CoA thioesterase, putative | LC | chr3:44...    54   1e-07
Medtr3g098130.2 | acyl-CoA thioesterase, putative | LC | chr3:44...    54   1e-07
Medtr3g098160.1 | acyl-coenzyme A thioesterase-like protein | LC...    52   5e-07
Medtr3g098170.1 | acyl-coenzyme A thioesterase-like protein | LC...    51   8e-07
Medtr5g069640.1 | acyl-CoA thioesterase, putative | HC | chr5:29...    50   2e-06

>Medtr8g433000.1 | acyl-CoA thioesterase | HC |
           chr8:12414302-12417557 | 20130731
          Length = 187

 Score =  266 bits (680), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 123/158 (77%), Positives = 141/158 (89%)

Query: 25  ELDPRHASETLTFVTRMGGGVSIPQNCNTNGFYDAFIRSFIKVDHIQRGRISCTIIAKPP 84
           E+DP+H SET  FV  MG G  +P+NCNT+GF+D+F+R+FIKVD IQRGRI+CT++AKPP
Sbjct: 30  EVDPKHVSETQLFVKLMGIGAPVPENCNTDGFFDSFLRNFIKVDQIQRGRITCTVVAKPP 89

Query: 85  ICNGYGTLHGGAVGVLVEVLSTACARTVVAEDKQISLGEVSISYLSGTPANEEVLANASV 144
           ICN YGTLHGGAVG LVEVLSTACARTVVAEDK++ LGE+SISYLSGTP NEEV ANASV
Sbjct: 90  ICNAYGTLHGGAVGSLVEVLSTACARTVVAEDKELFLGEISISYLSGTPINEEVEANASV 149

Query: 145 VKTGRNLTVVALEFKSKKNGNLLYITHATFYNMPVSSL 182
           VK+GRNLTVVALEFK KK GNL+Y+THATFYNMPVS L
Sbjct: 150 VKSGRNLTVVALEFKLKKTGNLVYLTHATFYNMPVSRL 187


>Medtr8g032450.1 | acyl-CoA thioesterase | HC |
           chr8:12169870-12173026 | 20130731
          Length = 187

 Score =  266 bits (680), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 123/158 (77%), Positives = 141/158 (89%)

Query: 25  ELDPRHASETLTFVTRMGGGVSIPQNCNTNGFYDAFIRSFIKVDHIQRGRISCTIIAKPP 84
           E+DP+H SET  FV  MG G  +P+NCNT+GF+D+F+R+FIKVD IQRGRI+CT++AKPP
Sbjct: 30  EVDPKHVSETQLFVKLMGIGAPVPENCNTDGFFDSFLRNFIKVDQIQRGRITCTVVAKPP 89

Query: 85  ICNGYGTLHGGAVGVLVEVLSTACARTVVAEDKQISLGEVSISYLSGTPANEEVLANASV 144
           ICN YGTLHGGAVG LVEVLSTACARTVVAEDK++ LGE+SISYLSGTP NEEV ANASV
Sbjct: 90  ICNAYGTLHGGAVGSLVEVLSTACARTVVAEDKELFLGEISISYLSGTPINEEVEANASV 149

Query: 145 VKTGRNLTVVALEFKSKKNGNLLYITHATFYNMPVSSL 182
           VK+GRNLTVVALEFK KK GNL+Y+THATFYNMPVS L
Sbjct: 150 VKSGRNLTVVALEFKLKKTGNLVYLTHATFYNMPVSRL 187


>Medtr3g098100.1 | acyl-CoA thioesterase, putative | HC |
           chr3:44772703-44770803 | 20130731
          Length = 155

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 55  GFYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVLSTAC--ARTV 112
           GF    I S ++VD I+ GR+ C++   P + N   +LHGGA   LV+V+ +A   A   
Sbjct: 27  GFLQPLIMSSLRVDLIEPGRVICSMNIPPRLLNSGNSLHGGATAALVDVVGSAAIPASGY 86

Query: 113 VAEDKQISLGEVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHA 172
           +  +  +S+ E+++SYL    A+EE+   A  ++ G+ L  +++EF+ KK G +      
Sbjct: 87  LGRNTGVSV-EINVSYLDAAYAHEEIEIEAKALRVGKTLATISVEFRKKKTGRVFAQGRH 145

Query: 173 TFYNMPVSS 181
           T Y +P +S
Sbjct: 146 TKY-LPTAS 153


>Medtr3g098140.1 | acyl-coenzyme A thioesterase-like protein | LC |
           chr3:44793138-44791950 | 20130731
          Length = 156

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 7/143 (4%)

Query: 39  TRMGGGVSIPQNCNTNGFYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVG 98
           T+ G   S+  +     F +      +++D I+ GR+  ++   P + N    LHGGA+ 
Sbjct: 8   TKKGEASSMVDDELPQEFLEHLTLRGLRLDRIEPGRVVFSMNIPPRLLNSSKYLHGGAIT 67

Query: 99  VLVE------VLSTACARTVVAEDKQISLGEVSISYLSGTPANEEVLANASVVKTGRNLT 152
            LV       + + A        +  +S+ E++IS    T  NEE+  +A V++ G+ + 
Sbjct: 68  TLVRDGNGYPMGAAAIPAAGFPWNSGVSI-EINISCFDATYVNEEIEIDARVLRIGKAVA 126

Query: 153 VVALEFKSKKNGNLLYITHATFY 175
           VV++EFK KK G +      T Y
Sbjct: 127 VVSVEFKKKKTGQVFAQGRHTKY 149


>Medtr8g032430.1 | hypothetical protein | LC |
           chr8:12180628-12180983 | 20130731
          Length = 58

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 32/36 (88%)

Query: 136 EEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITH 171
           EEV ANAS+ K+GRNLTV+ALEFK KK GNL+Y+T+
Sbjct: 7   EEVEANASLGKSGRNLTVIALEFKLKKTGNLVYLTN 42


>Medtr3g098130.1 | acyl-CoA thioesterase, putative | LC |
           chr3:44787465-44785690 | 20130731
          Length = 163

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 65  IKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVL-STACARTVVAEDKQISLGE 123
           +++D I+ GRI  ++   P + N    LHGGA+  LV+++ +TA      +    +S+ E
Sbjct: 46  LRLDLIEPGRIVFSMKIPPNLLNSSNCLHGGAITTLVDLVGATAVPTAGFSWSSGVSV-E 104

Query: 124 VSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATFY 175
           +++S L     +EE+  +  V++ G+ + V+++E + KK G +      T Y
Sbjct: 105 INVSCLDAAYVDEEIEIDGRVLRVGKTIAVISVELRKKKTGQIFAQGRHTKY 156


>Medtr3g098130.2 | acyl-CoA thioesterase, putative | LC |
           chr3:44789715-44785690 | 20130731
          Length = 201

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 65  IKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVL-STACARTVVAEDKQISLGE 123
           +++D I+ GRI  ++   P + N    LHGGA+  LV+++ +TA      +    +S+ E
Sbjct: 84  LRLDLIEPGRIVFSMKIPPNLLNSSNCLHGGAITTLVDLVGATAVPTAGFSWSSGVSV-E 142

Query: 124 VSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATFY 175
           +++S L     +EE+  +  V++ G+ + V+++E + KK G +      T Y
Sbjct: 143 INVSCLDAAYVDEEIEIDGRVLRVGKTIAVISVELRKKKTGQIFAQGRHTKY 194


>Medtr3g098160.1 | acyl-coenzyme A thioesterase-like protein | LC |
           chr3:44798069-44796369 | 20130731
          Length = 165

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 56  FYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVLS-TACARTVVA 114
           F    I   +++D I+ GR+  ++   P + N    LHGGA+  LV++   TA       
Sbjct: 34  FLQHLILRALRLDLIEPGRVVFSMNIPPRLLNSGKYLHGGAITTLVDIAGGTAIPAAGFP 93

Query: 115 EDKQISLGEVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLL 167
               +S+ E++IS L     NEE+  +  V++ G+ + V+++E + KK G + 
Sbjct: 94  WKSGVSV-EINISCLDAAYVNEEIEIDTRVLRLGKAVAVLSVELRKKKTGQVF 145


>Medtr3g098170.1 | acyl-coenzyme A thioesterase-like protein | LC |
           chr3:44801602-44799273 | 20130731
          Length = 160

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 56  FYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVL-STACARTVVA 114
           F + FI   +++D I+ G +  ++   P + N    LH GA+  LV+V+ + A       
Sbjct: 34  FLEPFILRGLRLDLIEPGHVVFSMNIPPRLLNSGKHLHVGAIVTLVDVVGAIAIPAAGFP 93

Query: 115 EDKQISLGEVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATF 174
            D  +SL E+++S       +EE+  +  V++ G  + VV++EF+ KK G +      T 
Sbjct: 94  MDTGVSL-EINVSCFDAAYVHEEIEIDNKVLRVGNAIAVVSVEFRKKKTGQIFAQGRHTK 152

Query: 175 YNMPVSSL 182
           Y   VS +
Sbjct: 153 YLPFVSKM 160


>Medtr5g069640.1 | acyl-CoA thioesterase, putative | HC |
           chr5:29532375-29535574 | 20130731
          Length = 161

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 52  NTNGFYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVLSTACART 111
           + + FY+ FI + IKV+ +Q G ISC+ I  P + +  G +  GA+  LV+ +  A    
Sbjct: 33  DNSSFYEHFILTGIKVEQVQPGFISCSFIVPPRLTDSTGKMGNGAIATLVDEVGGAL--- 89

Query: 112 VVAEDKQISLG-EVSISYLSGTPANEEVLANASVV--KTGRNLTVVALEFKS 160
           V  E   +++  ++SIS+LS    N+E+   + ++  K G + T+V L+ K+
Sbjct: 90  VHQEGLPMNVSVDMSISFLSTAHVNDELEITSRLLGRKGGYSGTIVLLKNKA 141