Miyakogusa Predicted Gene

Lj0g3v0130999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0130999.1 Non Characterized Hit- tr|I1K9T0|I1K9T0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.73,0,Apt1,FMP27,
C-terminal; SUBFAMILY NOT NAMED,NULL; ANTIGEN MLAA-22-RELATED,NULL;
seg,NULL,CUFF.7951.1
         (457 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g099880.1 | localization and RNA pol II promoter Fmp27 dom...   738   0.0  
Medtr5g066650.1 | localization and RNA pol II promoter Fmp27 dom...   571   e-163

>Medtr3g099880.1 | localization and RNA pol II promoter Fmp27 domain
            protein | HC | chr3:45820368-45850165 | 20130731
          Length = 2624

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/448 (84%), Positives = 399/448 (89%), Gaps = 2/448 (0%)

Query: 10   FSRKVMLRVDAQQGAPKDGNSPLELFQVEIYPLKIHLTETMYRMMWEYFFPEEEQDSQRR 69
            ++ K MLRVDA+QGAP+DGNS LELFQVEIYPLKIHLTETMYRMMWEYFFPEEEQDSQRR
Sbjct: 2179 WALKEMLRVDAKQGAPRDGNSSLELFQVEIYPLKIHLTETMYRMMWEYFFPEEEQDSQRR 2238

Query: 70   QEVWKVSTTAGARRVKKGSSVLEASASNSHSIKESETSSKSGISAVLFPATNQPSVHVDS 129
            QEVWKVSTTAGARRVKKGSSVLEASAS+S S KESETSSKSGISA+LFPAT+QP VH DS
Sbjct: 2239 QEVWKVSTTAGARRVKKGSSVLEASASSSQSAKESETSSKSGISAMLFPATSQPPVHADS 2298

Query: 130  AQASKAENVKENSGTGTTPELRRTSSFDRSWEETVAESVANELVLQSFSSSKDGPFGSTE 189
            AQ SK + VKEN GT  TPELRRTSSFDRSWEETVAESVANELVLQSFSSSK+GPF STE
Sbjct: 2299 AQISKVQTVKENPGTSITPELRRTSSFDRSWEETVAESVANELVLQSFSSSKNGPFSSTE 2358

Query: 190  QQDEASKNKSKDYKVVKGGRASHEEKKVAKSHEEKRSRPRKMMEFHNIKISRVELLVTYE 249
             QDEA KNKSKD K VKGGR+SHEEKKVAKSHEEKRSRPRKMMEFHNIKIS+VELLVTYE
Sbjct: 2359 HQDEA-KNKSKDSKGVKGGRSSHEEKKVAKSHEEKRSRPRKMMEFHNIKISQVELLVTYE 2417

Query: 250  GQRFVVNDLKLMMDQFHRPEFTGTWRRLFSRVKKHIIWGVLKSVTGMQGRKFNNKGQSQP 309
            GQR VVNDLKL+MDQFHRPEFTGTWR+LFSRVKKHIIWGVLKSVTGMQGRKF +KGQSQP
Sbjct: 2418 GQRIVVNDLKLLMDQFHRPEFTGTWRKLFSRVKKHIIWGVLKSVTGMQGRKFKDKGQSQP 2477

Query: 310  TGAGVPEIDLNFSDNEGQAGKSDQYPPSWPKRQGDGAGDGFVTSIRGLFNTQRRKAKAFV 369
               G+PEID  FS +EGQ GKSDQYP SW KR  DGAGDGFVTSIRGLF+ Q RKAK FV
Sbjct: 2478 PEPGLPEIDTIFSQHEGQGGKSDQYPLSWLKRPSDGAGDGFVTSIRGLFSAQSRKAKKFV 2537

Query: 370  LRTMRGEAENDFQGDWSESDVEFSPFARQLTITKAKKLIRRHTKKFRSRGQKGSTSQQRE 429
            L TMRG+ ENDFQGD S++D EFSPFARQLTIT  KKLIRRHTKKFRSRGQKGS+SQQRE
Sbjct: 2538 LHTMRGDTENDFQGDSSDNDTEFSPFARQLTIT-TKKLIRRHTKKFRSRGQKGSSSQQRE 2596

Query: 430  SLPSSPRETTPFXXXXXXXXXPYEDFHE 457
            SLPSSPRETTPF         PYEDFHE
Sbjct: 2597 SLPSSPRETTPFDSDSSSGSSPYEDFHE 2624


>Medtr5g066650.1 | localization and RNA pol II promoter Fmp27 domain
            protein | HC | chr5:28137001-28113373 | 20130731
          Length = 2613

 Score =  571 bits (1472), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/430 (69%), Positives = 344/430 (80%), Gaps = 25/430 (5%)

Query: 13   KVMLRVDAQQGAPKDGNSPLELFQVEIYPLKIHLTETMYRMMWEYFFPEEEQDSQRRQEV 72
            KVMLRVDA+QGAPKDG+SP ELFQV+IYPLKIHLTETMYRMMW YFFPEEE+DSQRRQEV
Sbjct: 2191 KVMLRVDARQGAPKDGSSPFELFQVDIYPLKIHLTETMYRMMWGYFFPEEERDSQRRQEV 2250

Query: 73   WKVSTTAGARRVKKGSSVLEASASNSHSIKESETSSKSGISAVLFPATNQPSVHVDSAQA 132
            WKVST  GARRVKKGSS  EAS S++ S KESE SSKSGISA+LFPATNQPS    S Q 
Sbjct: 2251 WKVSTAGGARRVKKGSSAHEASISSNQSTKESEASSKSGISALLFPATNQPS---GSTQT 2307

Query: 133  SKAENVKENSGTGTTPELRRTSSFDRSWEETVAESVANELVLQSFSSSKDGPFGSTEQQD 192
            SKA+NVK   G G+TPE           EETVAESVA+E          +GPFGSTEQ+D
Sbjct: 2308 SKAQNVKIVPGAGSTPEC----------EETVAESVADE----------NGPFGSTEQKD 2347

Query: 193  EASKNKSKDYKVVKGGRASHEEKKVAKSHEEKRSRPRKMMEFHNIKISRVELLVTYEGQR 252
            E SKNKSKD K VK G++S EEKKVAK  ++KRSRP+K+MEFHNIKIS+VEL +TYEGQR
Sbjct: 2348 EVSKNKSKDVKGVKAGQSSLEEKKVAKPQDDKRSRPKKIMEFHNIKISQVELCITYEGQR 2407

Query: 253  FVVNDLKLMMDQFHRPEFTGTWRRLFSRVKKHIIWGVLKSVTGMQGRKFNNKGQSQPTGA 312
            FVVND+KL+MDQF R EFTGTW+RLFSRVKKHIIWGVLKSVTGMQG+KF +KGQ+QP+GA
Sbjct: 2408 FVVNDMKLLMDQFVRAEFTGTWQRLFSRVKKHIIWGVLKSVTGMQGKKFKDKGQNQPSGA 2467

Query: 313  GVPEIDLNFSDNEGQAGKSDQYPPSWPKRQGDGAGDGFVTSIRGLFNTQRRKAKAFVLRT 372
            G PE + N SD EG AGK D++ PSWPKR  DGAGDGFVTS+RG+FN+QRRKAK  +L+ 
Sbjct: 2468 GAPEGEANLSDTEGHAGKPDKFSPSWPKRPTDGAGDGFVTSVRGIFNSQRRKAKK-LLKP 2526

Query: 373  MRGEAENDFQGDWSESDVEFSPFARQLTITKAKKLIRRHTKK-FRSRGQKGSTSQQRESL 431
             + EAEN+  GD SE++VE + FARQLTI KAKKL +R  KK   S+GQKGS+S Q E L
Sbjct: 2527 KKDEAENEGHGDLSENEVETTHFARQLTIIKAKKLFKRDNKKPPHSKGQKGSSSIQNEEL 2586

Query: 432  PSSPRETTPF 441
            PSS +E   +
Sbjct: 2587 PSSSKEAIAY 2596