Miyakogusa Predicted Gene

Lj0g3v0129799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129799.1 tr|C1FFV7|C1FFV7_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_60644
,25.91,8e-16,seg,NULL; DUF3414,Protein of unknown function
DUF3414,CUFF.7857.1
         (364 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g075330.1 | hypothetical protein | HC | chr4:28777193-2875...   561   e-160

>Medtr4g075330.1 | hypothetical protein | HC |
           chr4:28777193-28758743 | 20130731
          Length = 1961

 Score =  561 bits (1446), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/364 (74%), Positives = 303/364 (83%), Gaps = 1/364 (0%)

Query: 1   MADTTTVDASLWWDSFTLLLTDLENSSLSSDLPPILEKKLNDNHAWFVDTLSRFKPPSQK 60
           MADTT+VDASLWWDSFTLL T+LE+SSLSSDLP  L KKL DNHAWFVDTLS FKPP+QK
Sbjct: 1   MADTTSVDASLWWDSFTLLFTELEDSSLSSDLPLNLAKKLKDNHAWFVDTLSCFKPPNQK 60

Query: 61  SKEALNSKNLQIGSHHLTIQPHLRDKALQTSSCLLLDEVQSYILVERXXXXXXXXXXDSM 120
           SK+ALNSKN++IGSH + I+P L+DKALQ SSCLLLDEVQSYILVER          DS 
Sbjct: 61  SKDALNSKNVKIGSHQMNIEPQLKDKALQISSCLLLDEVQSYILVERYIEDNNAAI-DSK 119

Query: 121 APEFPNMMLIQYYKERQCLLKCIRWIFMHAIYIDPVSEKSTVKEEARKLLHDGLESKLVS 180
           AP+F  ++LI+YYKERQCLLKCIRWI M+AIYI PVSE ++VKEEA+KL HDGLESKLVS
Sbjct: 120 APDFIQIILIEYYKERQCLLKCIRWILMYAIYIGPVSENNSVKEEAKKLFHDGLESKLVS 179

Query: 181 FFEGLLSCSYPEQMDIDLFTLWAEETLIEDNLVLDILFLTYYDSFCTCSGEIWKKFAALY 240
             EGLLSCSYPEQMD+DLFTLWAEETLIEDNLVLDILFL Y   FCTC  EIWKKF ++Y
Sbjct: 180 SLEGLLSCSYPEQMDVDLFTLWAEETLIEDNLVLDILFLAYDGPFCTCGSEIWKKFGSIY 239

Query: 241 KGIIGGDYNLGKLAITTEAQELSYHIKVQXXXXXXXXXXXXXXXQMVHDEIPYRKGVFTF 300
           KGI+ G+YNLGKLAIT+E+ +LSYH+KVQ               QMVHDE PYR+G  TF
Sbjct: 240 KGILAGEYNLGKLAITSESHQLSYHVKVQLLLILIETLNLENLLQMVHDETPYRRGASTF 299

Query: 301 SLTDIQEMDALVSTFSVFEMNEAGPLVLAWAVFLYLLLTLPEKDDNNELMEIDHIGYVRQ 360
           S TD+QEMDALVSTFS FEMNEAGPL+LAWAVFLYLL TLP K+ NNEL++IDHIGYVRQ
Sbjct: 300 SFTDVQEMDALVSTFSTFEMNEAGPLILAWAVFLYLLSTLPGKNGNNELIDIDHIGYVRQ 359

Query: 361 AFEA 364
           AFEA
Sbjct: 360 AFEA 363