Miyakogusa Predicted Gene

Lj0g3v0129789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129789.1 Non Characterized Hit- tr|A5BQP2|A5BQP2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.73,3e-17,seg,NULL; Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.8017.1
         (590 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g075333.1 | pollen protein Ole E I-like protein | LC | chr...   265   7e-71

>Medtr4g075333.1 | pollen protein Ole E I-like protein | LC |
           chr4:28784971-28782249 | 20130731
          Length = 526

 Score =  265 bits (678), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 133/169 (78%), Positives = 143/169 (84%), Gaps = 5/169 (2%)

Query: 1   MQIFTRRQGALLCFWLSVFFVVVGFCHG--DSTVEVVGLGECADCKEYNIKTSQAFSGLR 58
           MQIFT RQ ALLC WL V F+V+GFC+G   STVEVVGLGECADC + NIKTSQAFSGL 
Sbjct: 1   MQIFTLRQRALLCSWLFVVFLVLGFCYGGDHSTVEVVGLGECADCIQNNIKTSQAFSGLH 60

Query: 59  VTIDCKAENGHFKTRGAGELDTNGNFKVSLPHDIVKSGELKEECYAQLHSSSAAPCPAHD 118
           VTIDCK  NGHFKTRGAGELD NGNFKVSLP +IV  GELKEECYAQLHS++AAPCPAHD
Sbjct: 61  VTIDCKEANGHFKTRGAGELDKNGNFKVSLPQEIVNEGELKEECYAQLHSATAAPCPAHD 120

Query: 119 GLHDTKIVFKSKTDDNKHTL--GPAGKLKFSSMTCTSEFFWPFFKHPLF 165
           GL +TKIV KSK+DD KHTL    AGKLKFSS TCTS+FFWP FKHPLF
Sbjct: 121 GLQNTKIVIKSKSDD-KHTLSTAAAGKLKFSSATCTSKFFWPLFKHPLF 168



 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 34/43 (79%)

Query: 547 YGKLPPLPHKSFFHHPKFGKLPPLPPTKFFHHPKFGKLPPLPP 589
           +GK PP+PHKSFFHHPKFGK PP+ P   FHHPKFG  PPL P
Sbjct: 482 FGKWPPIPHKSFFHHPKFGKWPPINPKSLFHHPKFGSWPPLSP 524



 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/42 (76%), Positives = 34/42 (80%), Gaps = 1/42 (2%)

Query: 547 YGKLPPLPHKSFFHHPK-FGKLPPLPPTKFFHHPKFGKLPPL 587
           YGK PPLP KSFFHHPK FGK PP+P   FFHHPKFGK PP+
Sbjct: 464 YGKWPPLPPKSFFHHPKYFGKWPPIPHKSFFHHPKFGKWPPI 505



 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 35/43 (81%), Gaps = 4/43 (9%)

Query: 547 YGKLPPLPHKSFFHHPKFGKLPPLPPTKFFHHPK-FGKLPPLP 588
           +GKLPP   KSFFHHPK+GK PPLPP  FFHHPK FGK PP+P
Sbjct: 450 FGKLPP---KSFFHHPKYGKWPPLPPKSFFHHPKYFGKWPPIP 489



 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 3/33 (9%)

Query: 557 SFFHHPKFGKLPPLPPTKFFHHPKFGKLPPLPP 589
           SFFHHPKFGK   LPP  FFHHPK+GK PPLPP
Sbjct: 443 SFFHHPKFGK---LPPKSFFHHPKYGKWPPLPP 472