Miyakogusa Predicted Gene

Lj0g3v0129599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129599.1 Non Characterized Hit- tr|B8B1I0|B8B1I0_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,46.4,7e-19,seg,NULL,CUFF.7844.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028655.1 | myb transcription factor | HC | chr8:10999892-...   175   8e-45
Medtr0123s0070.1 | myb transcription factor | HC | scaffold0123:...   137   2e-33
Medtr0123s0070.2 | myb transcription factor | HC | scaffold0123:...   123   4e-29
Medtr1g067000.2 | myb transcription factor | HC | chr1:28822118-...   101   2e-22
Medtr1g067000.1 | myb transcription factor | HC | chr1:28822118-...   101   2e-22

>Medtr8g028655.1 | myb transcription factor | HC |
           chr8:10999892-11006608 | 20130731
          Length = 333

 Score =  175 bits (444), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 84/109 (77%), Positives = 95/109 (87%), Gaps = 5/109 (4%)

Query: 2   GLTGAGQAVPLNSCYSSSNESTPPARPSSEGINQCNQRQPIKVMPDFAQVYRFIGSVFDP 61
           G TG+GQAVP+N CYSSSNE     + SS+GIN+ N  +P+KVMPDFAQVYRFIGSVFDP
Sbjct: 205 GWTGSGQAVPVNCCYSSSNE-----KQSSKGINEGNTGKPVKVMPDFAQVYRFIGSVFDP 259

Query: 62  DSTNHLQRLKQMDPINVETALLLMKNLSINLRSPEFEDHKRLISSYDAD 110
           +STN LQRLKQMDPINVET+LLLM+NLSINL SPEFEDHKRL+SSYD D
Sbjct: 260 NSTNQLQRLKQMDPINVETSLLLMRNLSINLTSPEFEDHKRLLSSYDPD 308


>Medtr0123s0070.1 | myb transcription factor | HC |
           scaffold0123:45193-37242 | 20130731
          Length = 307

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 80/98 (81%), Gaps = 2/98 (2%)

Query: 13  NSCYSSSNESTPPARPSSEGINQCNQRQPIKVMPDFAQVYRFIGSVFDPDSTNHLQRLKQ 72
           NSC  SS ESTP  RP  E  NQ N+  P++V+PDF+QVY FIGSVFDP+++ HLQ+LKQ
Sbjct: 189 NSC--SSTESTPKVRPVGESNNQVNKSLPLRVLPDFSQVYNFIGSVFDPEASEHLQKLKQ 246

Query: 73  MDPINVETALLLMKNLSINLRSPEFEDHKRLISSYDAD 110
           MD I+VET LLLM+NLSINL SP+FEDHK+L+SSY+ D
Sbjct: 247 MDRIDVETVLLLMRNLSINLTSPDFEDHKKLLSSYEVD 284


>Medtr0123s0070.2 | myb transcription factor | HC |
           scaffold0123:45193-37193 | 20130731
          Length = 286

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 2/88 (2%)

Query: 13  NSCYSSSNESTPPARPSSEGINQCNQRQPIKVMPDFAQVYRFIGSVFDPDSTNHLQRLKQ 72
           NSC  SS ESTP  RP  E  NQ N+  P++V+PDF+QVY FIGSVFDP+++ HLQ+LKQ
Sbjct: 189 NSC--SSTESTPKVRPVGESNNQVNKSLPLRVLPDFSQVYNFIGSVFDPEASEHLQKLKQ 246

Query: 73  MDPINVETALLLMKNLSINLRSPEFEDH 100
           MD I+VET LLLM+NLSINL SP+FEDH
Sbjct: 247 MDRIDVETVLLLMRNLSINLTSPDFEDH 274


>Medtr1g067000.2 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 64/91 (70%)

Query: 18  SSNESTPPARPSSEGINQCNQRQPIKVMPDFAQVYRFIGSVFDPDSTNHLQRLKQMDPIN 77
           S  E T    P+S+   Q  Q   I  +PDFA+VY FIGSVFDPD+  H+Q+LK+MDPIN
Sbjct: 185 SGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPIN 244

Query: 78  VETALLLMKNLSINLRSPEFEDHKRLISSYD 108
            ET LLLM+NL++NL SP F+  K+ +S+YD
Sbjct: 245 FETVLLLMRNLTVNLSSPNFDPIKKAMSTYD 275


>Medtr1g067000.1 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 64/91 (70%)

Query: 18  SSNESTPPARPSSEGINQCNQRQPIKVMPDFAQVYRFIGSVFDPDSTNHLQRLKQMDPIN 77
           S  E T    P+S+   Q  Q   I  +PDFA+VY FIGSVFDPD+  H+Q+LK+MDPIN
Sbjct: 185 SGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPIN 244

Query: 78  VETALLLMKNLSINLRSPEFEDHKRLISSYD 108
            ET LLLM+NL++NL SP F+  K+ +S+YD
Sbjct: 245 FETVLLLMRNLTVNLSSPNFDPIKKAMSTYD 275