Miyakogusa Predicted Gene

Lj0g3v0129539.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129539.1 tr|H9U0F4|H9U0F4_MESVI DEK1-like protein
(Fragment) OS=Mesostigma viride PE=4
SV=1,25.68,6e-18,seg,NULL,CUFF.7840.1
         (368 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088520.1 | calpain family cysteine protease | HC | chr8:3...   496   e-140

>Medtr8g088520.1 | calpain family cysteine protease | HC |
            chr8:36702342-36724494 | 20130731
          Length = 2155

 Score =  496 bits (1277), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/362 (70%), Positives = 269/362 (74%), Gaps = 1/362 (0%)

Query: 6    QYGFIAWLLSTCVGXXXXXXXXXXXXXXXXXTVPLMVACLSVAVPIWICNGYQFWVPRVN 65
            +YG IAWLLSTCVG                 TVPLMVACLS A+PIWICNGYQFWVPR+N
Sbjct: 690  KYGIIAWLLSTCVGLLLSFLSKSSVLLGLSLTVPLMVACLSFAIPIWICNGYQFWVPRIN 749

Query: 66   CTGSAGNDRIPRTKGIVLIFCMSVFVGSVLALGAIVSAKPLDDLRYKGWNGDQKSLVSPY 125
            CT +AGNDRIPRTKGIVLI CM VFVGSVLALGAIVSA+PLDDL YKGW  DQKSLVSPY
Sbjct: 750  CTENAGNDRIPRTKGIVLIICMLVFVGSVLALGAIVSARPLDDLAYKGWT-DQKSLVSPY 808

Query: 126  TSSVFLGWAMASAIGLVVTSALPIISWFATYRFSLSSAILVGISAVILVAFCGVSYLEVI 185
            TSSVF+GWAMASAIGLVVTS LPIISWFATYRF LSSAIL+GI A ILV FCGVSYLEVI
Sbjct: 809  TSSVFIGWAMASAIGLVVTSVLPIISWFATYRFPLSSAILIGIFAAILVTFCGVSYLEVI 868

Query: 186  KSREDQVPTKGDFXXXXXXXXXXXXXXSLCCGLLKWKDDDWKLSRGVYIFVIIGLMXXXX 245
            KSR+DQVPTKGDF              SLCCGLLKWKDD WKLSR VYIFV+IGL+    
Sbjct: 869  KSRDDQVPTKGDFLAALLPLVFIPAMLSLCCGLLKWKDDGWKLSRVVYIFVMIGLLLLFG 928

Query: 246  XXXXXXXXXKPWTXXXXXXXXXXXXXXXXXXXHYWASNNFYLSRKQMVFVCXXXXXXXXX 305
                     KPWT                   H+WASNNFYLSR QMVFVC         
Sbjct: 929  GISALIVVIKPWTIGVAFLLVLLLMVLAIGAIHHWASNNFYLSRIQMVFVCFFAFLLALA 988

Query: 306  XXXVGWFEDKPFFGASVGYFIFLFLLAGRALTVLLSNPIVVYSPRVLPVYVYDAHADCGK 365
               VGWFEDKPF GASVGYF+FLFLLAGRALTVLLS PIVVYSPRVLPVYVYDAHADCGK
Sbjct: 989  AFLVGWFEDKPFVGASVGYFLFLFLLAGRALTVLLSYPIVVYSPRVLPVYVYDAHADCGK 1048

Query: 366  NV 367
            NV
Sbjct: 1049 NV 1050