Miyakogusa Predicted Gene
- Lj0g3v0128359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0128359.1 Non Characterized Hit- tr|I1LA31|I1LA31_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,31.63,2e-16,Ran
BP2/NZF zinc finger-like,NULL; zf-RanBP,Zinc finger, RanBP2-type;
ZF_RANBP2_2,Zinc finger, RanBP,CUFF.7732.1
(390 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC ... 477 e-135
Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC ... 239 3e-63
Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC ... 187 1e-47
Medtr7g087047.1 | zinc finger (Ran-binding) family protein | HC ... 152 5e-37
Medtr7g087047.2 | zinc finger (Ran-binding) family protein | HC ... 108 1e-23
Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC | chr2:3... 62 1e-09
Medtr4g113840.1 | zinc finger (Ran-binding) family protein | HC ... 60 3e-09
Medtr2g075450.1 | hypothetical protein | LC | chr2:31562549-3155... 59 1e-08
Medtr2g054750.1 | zinc finger (Ran-binding) family protein | HC ... 54 2e-07
Medtr4g011190.1 | zinc finger (Ran-binding) family protein | HC ... 52 9e-07
>Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC |
chr6:24975567-24969959 | 20130731
Length = 470
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/400 (62%), Positives = 290/400 (72%), Gaps = 22/400 (5%)
Query: 1 MSSSKLALYGIGTALFRTSR----TITTNSPFLSFKPILPFPPLHFHR-RTCFXXXXXXX 55
MS+SKLALY T +FR R + N+PFL FKP PLH HR +T F
Sbjct: 1 MSTSKLALYR--TLIFRNPRIQPLSTKLNNPFLFFKP-----PLHHHRHQTSFSAFSTST 53
Query: 56 XXXXXXXXXXXDQLHPWPEWVSFIDRLNTKGYFTKPRPSDGTVYVNVNLLKDACLSFGRD 115
+HPWPEW+SF+DRL KGY +K D +VY ++NLLKDA LSF RD
Sbjct: 54 AAAEEESLSST--VHPWPEWISFVDRLRAKGYLSK-SADDNSVYSDINLLKDASLSFARD 110
Query: 116 RYDIFKLLPVEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAY 175
RYD+FKLL EDIQA+VE GCPN LRKAVNSAKRLRAHL+L+E DVCSAC+LRGSCDRAY
Sbjct: 111 RYDVFKLLSSEDIQAVVEDGCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAY 170
Query: 176 VTLNEFEADARTVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETST 235
V L E EADARTVDIVRILLFYAIDPLV +GGEK PGREVI+SS RKLLSQLIELSE S
Sbjct: 171 VILKESEADARTVDIVRILLFYAIDPLVLSGGEKPPGREVIESSARKLLSQLIELSEWSP 230
Query: 236 XXXXXXXXVRSKRTAQEAVAKGQLNSM--TNKVHKDVEMKSGDWMCTKCNFMNFSRNMQC 293
SK T+Q+ V+K + S + K+VEMK GDW+C KCNFMNFSRN +C
Sbjct: 231 --PPPPLPAYSKSTSQKDVSKVKPLSFKAAEMLSKNVEMKKGDWVCQKCNFMNFSRNRKC 288
Query: 294 LNCKDDRPKNSDLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVN---LGVVEM 350
LNC++D PK+ D EMK+GDWIC ECNF+NFSRN CL+CKTEGP+RVN V+M
Sbjct: 289 LNCEEDGPKSDDPRTFEMKEGDWICTECNFMNFSRNITCLECKTEGPKRVNRLDTNEVQM 348
Query: 351 KKGDWTCPKCEFKNYASNVKCLRCPEPRPKKNAGDWNCPK 390
KKGDWTCP+C F N+ASNVKC +CPEPRPKK+ GDW+CPK
Sbjct: 349 KKGDWTCPQCGFMNFASNVKCFKCPEPRPKKHPGDWSCPK 388
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 275 GDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDLSG------VEMKQGDWICPECNFLNFSR 328
GDW C KC+FMNF+ +C C++ P + G + GDW CP+C+F N++R
Sbjct: 382 GDWSCPKCDFMNFASKDKCFRCQESNPNPNKYPGEWPNPNSKKYPGDWSCPKCDFYNYAR 441
Query: 329 NKQCLKCKTEGPERVNLGVVE 349
N CLKC + + V E
Sbjct: 442 NTTCLKCNAKPSKEQQTNVDE 462
>Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC |
chr1:11448862-11445087 | 20130731
Length = 506
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 195/325 (60%), Gaps = 35/325 (10%)
Query: 70 HPWPEWVSFIDRLNTKGYFTKPRPSDGTVYVN-------VNLLKDACLSFGRDRYDIFKL 122
HPWPEWV ++ L KG+F ++G + N NL++ ACL+FGRD I +
Sbjct: 62 HPWPEWVYLMEYLIKKGHFH----AEGNPFENPPLGAKESNLIRTACLNFGRDHAHILRF 117
Query: 123 LPVEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFE 182
L +DI IV GCP+L RK VNS KRLRA+ ++E +VCS+C+LRG C+RA+V E E
Sbjct: 118 LSRKDIGVIVTFGCPSLDRKVVNSGKRLRAYAGIDEGNVCSSCNLRGDCERAFVKAREDE 177
Query: 183 ADARTVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETSTXXXXXXX 242
RTVD++RI+L Y +DP++ + K +++ SVR+LL +++E
Sbjct: 178 G-GRTVDVMRIILTYGLDPIIGSVDNKPSLNKMVKESVRRLLKKIVECGTEENPSTFPD- 235
Query: 243 XVRSKRTAQEAVAKGQLNSMTNKVHKDVEMKSGDWMCTKCNFMNFSRNMQCLNCK---DD 299
++AV + N + +K KDV +K GDW+C KCNF NF+RN++CL+C ++
Sbjct: 236 ------ITEDAVEEVHPNPL-DKGKKDVPLKQGDWLCPKCNFHNFARNIKCLHCDNFCEE 288
Query: 300 RPKN--SDLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPE--RVNLGVVEMKKGDW 355
+ K D + + +K+GDWIC +CNFLNF++N +CL+CK EGP R+N G+W
Sbjct: 289 KIKQLKEDNNHLPLKKGDWICDKCNFLNFAKNTRCLQCK-EGPSNRRIN-------PGEW 340
Query: 356 TCPKCEFKNYASNVKCLRCPEPRPK 380
C C + N+ N+ CL+C RPK
Sbjct: 341 ECESCNYINFRRNMVCLKCDHRRPK 365
>Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC |
chr7:46680792-46676183 | 20130731
Length = 886
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 160/293 (54%), Gaps = 31/293 (10%)
Query: 69 LHPWPEWVSFIDRLNTKGYFTKPRPSDGTVYVNV-------------NLLKD------AC 109
+HPWPEW+ ++RL + YF R + + ++ + KD AC
Sbjct: 125 VHPWPEWIQLMERLVHQNYFDHRRKDEDKMVQDLGFDSSEIVHDEGLDFTKDFKSVHAAC 184
Query: 110 LSFGRDRYDIFKLLPVEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRG 169
L+FG+DR+D+ + L +DIQ +V GCPN+ RK V S K LR + L+E DVCS+CSLR
Sbjct: 185 LNFGKDRFDLLRSLSRQDIQVLVGFGCPNVDRKVVFSGKLLRKLVHLDEGDVCSSCSLRN 244
Query: 170 SCDRAYVTLNEFEADARTVDIVRILLFYAIDPLVFNGGEKQP--GREVIDSSVRKLLSQL 227
+CD AY+ N+ E +ART+DI+R+LL DP+ + +P ++ + + VRKLL ++
Sbjct: 245 NCDSAYLLTNK-EDEARTIDIMRMLLTLGFDPINGSSVLNKPLLKQKSVKAVVRKLLHEV 303
Query: 228 IELSETSTXXXXXXXXVRSKRTAQEAVAKGQLNSMTNKVHKDVEMKSGDWMCTKCNFMNF 287
++LS ++ + + DVEMK GDW+C KC+FMNF
Sbjct: 304 VKLSSVPIDPNLPPPVIKKPPPKVKQPPPTPKRRVG---RDDVEMKRGDWLCPKCDFMNF 360
Query: 288 SRNMQCLNCKDDRPKNSDLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGP 340
++N CL C RPK ++ G+W C ECNFLN+ RN C C+ + P
Sbjct: 361 AKNNVCLQCDAKRPKR------QLLPGEWECTECNFLNYRRNVVCFHCECKRP 407
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 309 VEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNLGVVEMKKGDWTCPKCEFKNYASN 368
VEMK+GDW+CP+C+F+NF++N CL+C + P+R ++ G+W C +C F NY N
Sbjct: 343 VEMKRGDWLCPKCDFMNFAKNNVCLQCDAKRPKR------QLLPGEWECTECNFLNYRRN 396
Query: 369 VKCLRCPEPRP 379
V C C RP
Sbjct: 397 VVCFHCECKRP 407
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 342 RVNLGVVEMKKGDWTCPKCEFKNYASNVKCLRCPEPRPKKN--AGDWNC 388
RV VEMK+GDW CPKC+F N+A N CL+C RPK+ G+W C
Sbjct: 337 RVGRDDVEMKRGDWLCPKCDFMNFAKNNVCLQCDAKRPKRQLLPGEWEC 385
>Medtr7g087047.1 | zinc finger (Ran-binding) family protein | HC |
chr7:33870448-33877120 | 20130731
Length = 1090
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 152/282 (53%), Gaps = 39/282 (13%)
Query: 70 HPWPEWVSFIDRLNTKGYFTKPRPSDG---TVYVNVNLLKDACLSFGRDRYDIFKLLPVE 126
HPWPE+ F+ +++ GY + PSD TV ++ + ACLSF RDR ++ +LL +
Sbjct: 78 HPWPEFSRFLSHISSAGYTS---PSDAFSPTVELSQAEVS-ACLSFARDRPNLLRLLSIR 133
Query: 127 DIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFEADAR 186
D+ +V+ G P + + +S ++++ L ++ + D+A +
Sbjct: 134 DVAVVVQHGTPFMFSDSQDSVSKMKSFLSNGDSTALDS-------DKANM---------- 176
Query: 187 TVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETSTXXXXXXXXVRS 246
VD+++ +L YA LV + R +++SSVR L +L +LS ++ S
Sbjct: 177 -VDLMKFMLSYASSCLVSSEMNNLYNRNLVESSVRNLFGELFKLSYSTPGP-------NS 228
Query: 247 KRTAQEAVAKGQLNSMTNKVHKDVEMKSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDL 306
+ Q + G+ T +++EMK GDW+C +CNFMNF+RNM+CL C++ RPK
Sbjct: 229 FDSVQNQMPGGRFE-HTMPPGQNIEMKRGDWICPRCNFMNFARNMKCLECEEARPKR--- 284
Query: 307 SGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNLGVV 348
++ G+W CP+C+F N+ RN CL+C + P +++LG +
Sbjct: 285 ---QLTGGEWECPQCDFHNYGRNVACLRCDCKRPGQISLGSI 323
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Query: 348 VEMKKGDWTCPKCEFKNYASNVKCLRCPEPRPKKN--AGDWNCPK 390
+EMK+GDW CP+C F N+A N+KCL C E RPK+ G+W CP+
Sbjct: 251 IEMKRGDWICPRCNFMNFARNMKCLECEEARPKRQLTGGEWECPQ 295
>Medtr7g087047.2 | zinc finger (Ran-binding) family protein | HC |
chr7:33870448-33876993 | 20130731
Length = 915
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 14/161 (8%)
Query: 188 VDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETSTXXXXXXXXVRSK 247
VD+++ +L YA LV + R +++SSVR L +L +LS ++ S
Sbjct: 2 VDLMKFMLSYASSCLVSSEMNNLYNRNLVESSVRNLFGELFKLSYSTPGPN-------SF 54
Query: 248 RTAQEAVAKGQLNSMTNKVHKDVEMKSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDLS 307
+ Q + G+ T +++EMK GDW+C +CNFMNF+RNM+CL C++ RPK
Sbjct: 55 DSVQNQMPGGRF-EHTMPPGQNIEMKRGDWICPRCNFMNFARNMKCLECEEARPKR---- 109
Query: 308 GVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNLGVV 348
++ G+W CP+C+F N+ RN CL+C + P +++LG +
Sbjct: 110 --QLTGGEWECPQCDFHNYGRNVACLRCDCKRPGQISLGSI 148
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Query: 348 VEMKKGDWTCPKCEFKNYASNVKCLRCPEPRPKKN--AGDWNCPK 390
+EMK+GDW CP+C F N+A N+KCL C E RPK+ G+W CP+
Sbjct: 76 IEMKRGDWICPRCNFMNFARNMKCLECEEARPKRQLTGGEWECPQ 120
>Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC |
chr2:31567796-31564591 | 20130731
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 74 EWVSFIDRLNTKGYFTKPRPSDGTVYVNVNL-----------LKDACLSFGRDRYDIFKL 122
E V F+ L GYF + G VY N+ +K A F D +I K
Sbjct: 143 ETVMFLYHLYQNGYFEDAK--FGYVYGRFNIGWFETPYALGYVKFAAKKFANDNLEIAKW 200
Query: 123 LPVEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFE 182
L ++ ++ GCP++ R V AKRLR ++ E VCS C LR SC +V N ++
Sbjct: 201 LSGSALKQMLVFGCPSISRNDVFPAKRLRKFFEVPENTVCSKCMLRESCK--FVNQNVWK 258
Query: 183 ADARTVDI---VRILLFYA---IDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETS 234
D +D+ V++++ YA + P + E + SV LL++ ++LS+ +
Sbjct: 259 CDTNKLDLEIAVKVVISYALHLVHPQLVVSDE-------VKKSVDHLLNEFVKLSQIT 309
>Medtr4g113840.1 | zinc finger (Ran-binding) family protein | HC |
chr4:46857090-46858933 | 20130731
Length = 140
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 51/139 (36%), Gaps = 25/139 (17%)
Query: 270 VEMKSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDLSG-----VEMKQGDWICPE--CN 322
+ GDWMC C +NF + C NC + D S E GDW C C
Sbjct: 1 MSWSGGDWMCGACEHINFKKREACQNCGYPKYGGPDPSTYRYNRTETLAGDWFCTSMNCG 60
Query: 323 FLNFSRNKQCLKCKT--------EGPERVNLGVV--------EMKKGDWTCPK--CEFKN 364
N++ C +C G V G K GDW CP+ C N
Sbjct: 61 AHNYASRSNCYRCGAFKDPYSSGYGGNMVGSGGYGSDCSSPPGWKSGDWICPRIGCGIHN 120
Query: 365 YASNVKCLRCPEPRPKKNA 383
YAS +C +C PR A
Sbjct: 121 YASRTECYKCKMPRDYGGA 139
>Medtr2g075450.1 | hypothetical protein | LC |
chr2:31562549-31559979 | 20130731
Length = 282
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 74 EWVSFIDRLNTKGYFTKPRPSDGT-----VYVN----VNLLKDACLSFGRDRYDIFKLLP 124
+ V F+ L GYF + S + V+ N + K A + F D I + L
Sbjct: 103 DMVMFLKHLYQNGYFKDAKFSKFSTRFQLVWFNKQYALGYAKFAAMKFATDNPQIAEWLS 162
Query: 125 VEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFEAD 184
++ + GCP + R V AKRLR L++ E VCS C LR SC +V N D
Sbjct: 163 GSALKQVAVFGCPFIGRNGVFPAKRLRKCLEVPENTVCSKCMLRESCK--FVNENVSGCD 220
Query: 185 ARTV-DIVRILLFYAI---DPLVFNGGEKQPGREVIDSSVRKLLSQLIELSET 233
+ D++++++ YA+ DP + E ++ SV LL++ ++LS++
Sbjct: 221 KLDLNDVMKVIIPYALHWMDPQLVVSDE-------LNKSVNHLLNEFVKLSQS 266
>Medtr2g054750.1 | zinc finger (Ran-binding) family protein | HC |
chr2:23383920-23382437 | 20130731
Length = 128
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 13/122 (10%)
Query: 270 VEMKSGDWMCTKCNFMNFSRNMQCLNCKDDR-----PKNSDLSGVEMKQGDWICP--ECN 322
+ GDWMC C +NF + C NC + P+ + E GDW C C
Sbjct: 1 MSWSGGDWMCNACQHINFKKRDACQNCGYPKIGGPDPETYRYNWTETLAGDWYCSGMNCG 60
Query: 323 FLNFSRNKQCLKC---KTEGPERVNLGV-VEMKKGDWTCPK--CEFKNYASNVKCLRCPE 376
N++ C +C K + + K GDW C + C NYAS +C +C
Sbjct: 61 AHNYASRTSCYRCGALKNDNSYGSDCNYPPGWKTGDWICTRYGCGVHNYASRGECFKCKT 120
Query: 377 PR 378
P+
Sbjct: 121 PK 122
>Medtr4g011190.1 | zinc finger (Ran-binding) family protein | HC |
chr4:2646573-2643799 | 20130731
Length = 147
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 50/140 (35%), Gaps = 36/140 (25%)
Query: 275 GDWMCTKCNFMNFSRNMQCLNCKDDR-----PKNSDLSGV-----------EMKQGDWIC 318
GDW C C MNF R C C D + S G+ +++ GDW C
Sbjct: 5 GDWNCRSCQHMNFQRRESCQRCGDSKYGERVDYGSVFGGIRGGSSFGLSGSDVRLGDWYC 64
Query: 319 --PECNFLNFSRNKQCLKCKTEGPERVNLGVVE----------------MKKGDWTCPK- 359
C NF+ C KC + G K GDW C +
Sbjct: 65 GAGNCGAHNFASRLSCFKCGAFKDDLAGGGYNNSDILLSRGFGGSTRPGWKSGDWICNRL 124
Query: 360 -CEFKNYASNVKCLRCPEPR 378
C N+AS ++C +C PR
Sbjct: 125 GCNEHNFASRMECFKCSAPR 144