Miyakogusa Predicted Gene
- Lj0g3v0128249.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0128249.1 tr|H9BZ74|H9BZ74_BIGNA Tic40 OS=Bigelowiella
natans PE=2 SV=1,35,4e-18,seg,NULL; Heat shock chaperonin-binding
motif.,Heat shock chaperonin-binding; UCH37_bd,NULL;
OS12G06,CUFF.7736.1
(304 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g063200.1 | hydroxyproline-rich glycoprotein family protei... 395 e-110
>Medtr3g063200.1 | hydroxyproline-rich glycoprotein family protein |
HC | chr3:28596031-28603623 | 20130731
Length = 435
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/306 (68%), Positives = 226/306 (73%), Gaps = 2/306 (0%)
Query: 1 MQQAFKTMMGGMNSQSNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTQSRAPSTPSAS 60
MQQAFKTMMG MN+Q+N TQS+A ST +AS
Sbjct: 128 MQQAFKTMMGQMNTQNNPFESGAFSPGSPFPFPMPTPPGPAAPANSTSTQSQASSTRTAS 187
Query: 61 QSTITVDIPPTKVEAAPA--TXXXXXXXXXXXXXXXGFVDVSPEETVQKSPXXXXXXXXX 118
QST+TVDIP TKVE++P FVDVSPEETVQ++
Sbjct: 188 QSTVTVDIPATKVESSPGPDINVKDEVEVKNEPKKSAFVDVSPEETVQQNAFERFKDIDS 247
Query: 119 XXXXXXXWVPKEAFQNGTPSNQGVGDSPGSQSARKSVLSVDALEKMMDDPTVQKMVFPYL 178
P EA QNG PSNQG GDSPGSQSARKSVLSVDALEKMM+DPTVQKMV+PYL
Sbjct: 248 SSSFKEARAPAEASQNGAPSNQGFGDSPGSQSARKSVLSVDALEKMMEDPTVQKMVYPYL 307
Query: 179 PEEMRNPTTFKWMLQNPQYRQQLEEMLNNMGGSTEWDGQMMDTLKNFDLNSPEVKQQFDQ 238
PEEMRNPTTFKWMLQNP+YRQQLEEMLNNMGG TEWD +MMDTLKNFDLNSP+VKQQFDQ
Sbjct: 308 PEEMRNPTTFKWMLQNPEYRQQLEEMLNNMGGGTEWDSRMMDTLKNFDLNSPDVKQQFDQ 367
Query: 239 IGLSPEEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPLNIAKYQNDKEVMDVFNKISEL 298
IGLSPEEVISKIMANPDVAMAFQNPRVQAAIMDCSQNP+NIAKYQNDKEVMDVFNKISEL
Sbjct: 368 IGLSPEEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPMNIAKYQNDKEVMDVFNKISEL 427
Query: 299 FPGVSG 304
FPGVSG
Sbjct: 428 FPGVSG 433