Miyakogusa Predicted Gene
- Lj0g3v0127869.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0127869.1 Non Characterized Hit- tr|K4A9C5|K4A9C5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si035481,32.4,0.0000001,LEADERPTASE,Peptidase S26A, signal
peptidase I; no description,Peptidase S24/S26A/S26B/S26C,
beta-ri,CUFF.7872.1
(352 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g100960.1 | processing peptidase | HC | chr3:46459060-4646... 451 e-127
Medtr3g100960.3 | processing peptidase | HC | chr3:46459060-4646... 432 e-121
Medtr3g100960.2 | processing peptidase | HC | chr3:46459060-4646... 432 e-121
Medtr2g059220.1 | processing peptidase | HC | chr2:24452161-2445... 358 4e-99
Medtr8g103470.1 | signal peptidase I family protein | HC | chr8:... 197 2e-50
Medtr3g088435.1 | signal peptidase I family protein | HC | chr3:... 154 2e-37
Medtr2g072450.1 | inner membrane protease subunit 1 | HC | chr2:... 63 4e-10
Medtr8g039980.1 | inner membrane protease subunit-like protein |... 60 3e-09
Medtr8g039980.2 | inner membrane protease subunit-like protein |... 60 3e-09
Medtr8g039980.3 | inner membrane protease subunit-like protein |... 60 3e-09
Medtr8g039990.1 | inner membrane protease subunit 1 | HC | chr8:... 54 2e-07
Medtr8g039990.2 | inner membrane protease subunit 1 | HC | chr8:... 54 2e-07
>Medtr3g100960.1 | processing peptidase | HC |
chr3:46459060-46461865 | 20130731
Length = 375
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/355 (67%), Positives = 271/355 (76%), Gaps = 14/355 (3%)
Query: 1 MAIRATFSFSGYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQKPDRDPSGTVRS--F 58
MAIR TFSFSGYVAQNLVSSAGVRVANSRCVQEC ILSR FG+N KPD + SG R+
Sbjct: 1 MAIRVTFSFSGYVAQNLVSSAGVRVANSRCVQECCILSRLFGSNPKPDLERSGGFRNRNL 60
Query: 59 FSDRERPKSNSWVKNSAYSTLAGEILGDNFSNPIVLGLISVMKXXXXXXXXXXXXXXXXX 118
+SD +P+ NS V S YSTLAGEIL ++ +NPI+LGLIS+MK
Sbjct: 61 YSDFTKPR-NSPV--SVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGA--- 114
Query: 119 FGISPIKTSSIIPFLQGSKWLPCNESVPDPT-WEVDKGGTPCVVEXXXXXXXXXXXXXXX 177
GISP KTSSIIPFLQGSKWLPCNESVP T WEVDKGGT +
Sbjct: 115 MGISPFKTSSIIPFLQGSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSDKESRLDL- 173
Query: 178 XXNSRELERTSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLEVGD 237
N +E WI+++LNVCSED KA FTA+TVSLLFKSFLAEP+SIPSASMYPTLEVGD
Sbjct: 174 --NQKE-NTNGWISKLLNVCSEDAKAVFTAVTVSLLFKSFLAEPKSIPSASMYPTLEVGD 230
Query: 238 RILAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLL 297
R+L EK SFFFRKPDVSDIVIF AP L + FS SDVFIKR+VAKAGD+VEVRDGKLL
Sbjct: 231 RVLTEKFSFFFRKPDVSDIVIFKAPSWL-KAYGFSSSDVFIKRVVAKAGDVVEVRDGKLL 289
Query: 298 VNGVAEEEDYVLEPLNYELDRMVVPKGHVYVLGDNRNRSFDSHNWGPLPVENILG 352
VNGVAE+E++VLEPL YEL MVVPKGHV+V+GDNRN+SFDSHNWGPLP+ENI+G
Sbjct: 290 VNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNWGPLPIENIVG 344
>Medtr3g100960.3 | processing peptidase | HC |
chr3:46459060-46461840 | 20130731
Length = 334
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/345 (67%), Positives = 261/345 (75%), Gaps = 14/345 (4%)
Query: 1 MAIRATFSFSGYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQKPDRDPSGTVRS--F 58
MAIR TFSFSGYVAQNLVSSAGVRVANSRCVQEC ILSR FG+N KPD + SG R+
Sbjct: 1 MAIRVTFSFSGYVAQNLVSSAGVRVANSRCVQECCILSRLFGSNPKPDLERSGGFRNRNL 60
Query: 59 FSDRERPKSNSWVKNSAYSTLAGEILGDNFSNPIVLGLISVMKXXXXXXXXXXXXXXXXX 118
+SD +P+ NS V S YSTLAGEIL ++ +NPI+LGLIS+MK
Sbjct: 61 YSDFTKPR-NSPV--SVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGA--- 114
Query: 119 FGISPIKTSSIIPFLQGSKWLPCNESVPDPT-WEVDKGGTPCVVEXXXXXXXXXXXXXXX 177
GISP KTSSIIPFLQGSKWLPCNESVP T WEVDKGGT +
Sbjct: 115 MGISPFKTSSIIPFLQGSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSDKESRLDL- 173
Query: 178 XXNSRELERTSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLEVGD 237
N +E WI+++LNVCSED KA FTA+TVSLLFKSFLAEP+SIPSASMYPTLEVGD
Sbjct: 174 --NQKE-NTNGWISKLLNVCSEDAKAVFTAVTVSLLFKSFLAEPKSIPSASMYPTLEVGD 230
Query: 238 RILAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLL 297
R+L EK SFFFRKPDVSDIVIF AP L + FS SDVFIKR+VAKAGD+VEVRDGKLL
Sbjct: 231 RVLTEKFSFFFRKPDVSDIVIFKAPSWL-KAYGFSSSDVFIKRVVAKAGDVVEVRDGKLL 289
Query: 298 VNGVAEEEDYVLEPLNYELDRMVVPKGHVYVLGDNRNRSFDSHNW 342
VNGVAE+E++VLEPL YEL MVVPKGHV+V+GDNRN+SFDSHNW
Sbjct: 290 VNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNW 334
>Medtr3g100960.2 | processing peptidase | HC |
chr3:46459060-46461769 | 20130731
Length = 334
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/345 (67%), Positives = 261/345 (75%), Gaps = 14/345 (4%)
Query: 1 MAIRATFSFSGYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQKPDRDPSGTVRS--F 58
MAIR TFSFSGYVAQNLVSSAGVRVANSRCVQEC ILSR FG+N KPD + SG R+
Sbjct: 1 MAIRVTFSFSGYVAQNLVSSAGVRVANSRCVQECCILSRLFGSNPKPDLERSGGFRNRNL 60
Query: 59 FSDRERPKSNSWVKNSAYSTLAGEILGDNFSNPIVLGLISVMKXXXXXXXXXXXXXXXXX 118
+SD +P+ NS V S YSTLAGEIL ++ +NPI+LGLIS+MK
Sbjct: 61 YSDFTKPR-NSPV--SVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGA--- 114
Query: 119 FGISPIKTSSIIPFLQGSKWLPCNESVPDPT-WEVDKGGTPCVVEXXXXXXXXXXXXXXX 177
GISP KTSSIIPFLQGSKWLPCNESVP T WEVDKGGT +
Sbjct: 115 MGISPFKTSSIIPFLQGSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSDKESRLDL- 173
Query: 178 XXNSRELERTSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLEVGD 237
N +E WI+++LNVCSED KA FTA+TVSLLFKSFLAEP+SIPSASMYPTLEVGD
Sbjct: 174 --NQKE-NTNGWISKLLNVCSEDAKAVFTAVTVSLLFKSFLAEPKSIPSASMYPTLEVGD 230
Query: 238 RILAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLL 297
R+L EK SFFFRKPDVSDIVIF AP L + FS SDVFIKR+VAKAGD+VEVRDGKLL
Sbjct: 231 RVLTEKFSFFFRKPDVSDIVIFKAPSWL-KAYGFSSSDVFIKRVVAKAGDVVEVRDGKLL 289
Query: 298 VNGVAEEEDYVLEPLNYELDRMVVPKGHVYVLGDNRNRSFDSHNW 342
VNGVAE+E++VLEPL YEL MVVPKGHV+V+GDNRN+SFDSHNW
Sbjct: 290 VNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNW 334
>Medtr2g059220.1 | processing peptidase | HC |
chr2:24452161-24453195 | 20130731
Length = 344
Score = 358 bits (920), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/361 (57%), Positives = 241/361 (66%), Gaps = 52/361 (14%)
Query: 1 MAIRATFSFSGYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQKPDRDPS--GTVRSF 58
MAIRATFSFSGYVAQ LVSSA VRVAN R V EC ILSRFFG+NQKPD D S G +F
Sbjct: 1 MAIRATFSFSGYVAQTLVSSASVRVANPRGVHECCILSRFFGSNQKPDLDRSSCGIGENF 60
Query: 59 FSDRERPKSNSWVKNSAYSTLAGEILGDNFSNPIVLGLISVMKXXXXXXXXXXXXXXXXX 118
RPK S YSTLAG++L + GLI +MK
Sbjct: 61 ----RRPKM------STYSTLAGDLLTE--------GLIWMMKSSAVVPGSSTGM----- 97
Query: 119 FGISPIKTSSIIPFLQGSKWLPCNESVPDPT-------WEVDKGGTPCVVEXXXXXXXXX 171
GISP K SSIIP LQ SKWLPCNESV +PT WE+ P
Sbjct: 98 MGISPFKPSSIIPLLQVSKWLPCNESVINPTTCINPTTWEIAAFKPP------------- 144
Query: 172 XXXXXXXXNSRELERTSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYP 231
N +E + SWI++ S+D KA FTA TVSLL+KS LAEP+SIPS+SMYP
Sbjct: 145 -ESRLLNLNQKE-KNISWISKY----SKDAKAVFTAFTVSLLYKSSLAEPKSIPSSSMYP 198
Query: 232 TLEVGDRILAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEV 291
TLEVGDR+L EK S FFRKP VSDIVIF PP +++ +S SDVFIKRIVAKAGD+V+V
Sbjct: 199 TLEVGDRVLTEKFSLFFRKPHVSDIVIF-KPPQFLKEFGYSSSDVFIKRIVAKAGDVVQV 257
Query: 292 RDGKLLVNGVAEEEDYVLEPLNYELDRMVVPKGHVYVLGDNRNRSFDSHNWGPLPVENIL 351
+ GKLLVNGVAE+E++VLEPL+YEL MVVP GHV+V+GDNRN+SFDSHNWGPLP++NI+
Sbjct: 258 KGGKLLVNGVAEQEEFVLEPLDYELAPMVVPAGHVFVMGDNRNQSFDSHNWGPLPIKNIV 317
Query: 352 G 352
G
Sbjct: 318 G 318
>Medtr8g103470.1 | signal peptidase I family protein | HC |
chr8:43535731-43531875 | 20130731
Length = 292
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Query: 194 LNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLEVGDRILAEKVSFFFRKPDV 253
LN S+D K F A+ +SL F++F+AEPR IPS SMYPT +VGDRI+AEKVS++FRKP
Sbjct: 98 LNFTSDDAKTVFAALAISLAFRTFIAEPRFIPSLSMYPTYDVGDRIVAEKVSYYFRKPCA 157
Query: 254 SDIVIFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLLVNGVAEEEDYVLEPLN 313
+DIVIF +PP+L E + ++ DVFIKR+VAK GD+VEVR+G L+VNGV +E ++ E
Sbjct: 158 NDIVIFKSPPVLQE-VGYTDDDVFIKRVVAKEGDVVEVRNGHLIVNGVERDEKFINEQPK 216
Query: 314 YELDRMVVPKGHVYVLGDNRNRSFDSHNWGPLPVENILG 352
YE+ VP+ V+V+GDNRN S+DSH WGPLP +NI+G
Sbjct: 217 YEMKPTRVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIG 255
>Medtr3g088435.1 | signal peptidase I family protein | HC |
chr3:40185847-40190700 | 20130731
Length = 193
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 91/129 (70%), Gaps = 3/129 (2%)
Query: 224 IPSASMYPTLEVGDRILAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSDVFIKRIVA 283
IPS+SMYPTL VGDRI+ EK S++ R P + DI+ F P + + +FIKR+VA
Sbjct: 57 IPSSSMYPTLHVGDRIIIEKASYYIRSPSIHDIITFRDP---TQHSGDNTDVIFIKRVVA 113
Query: 284 KAGDIVEVRDGKLLVNGVAEEEDYVLEPLNYELDRMVVPKGHVYVLGDNRNRSFDSHNWG 343
K GD VEV G L VNGVA+EED+V+E Y VPKGHVYVLGDNRN S+DSH WG
Sbjct: 114 KEGDTVEVHHGGLYVNGVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHIWG 173
Query: 344 PLPVENILG 352
PLP++NI+G
Sbjct: 174 PLPMKNIVG 182
>Medtr2g072450.1 | inner membrane protease subunit 1 | HC |
chr2:30504106-30498450 | 20130731
Length = 166
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 188 SWITRMLNVCSE--DTKAAFTAITVSLLFK-SFLAEPRSIPSASMYPTLEV-GDRILAEK 243
++I + +V E D A L F ++L P SM PTL + GD +L E
Sbjct: 5 NYIAQWKSVAKEALDRSAIIAKFLCYLHFTGNYLCSPTHAYGPSMLPTLNIAGDVVLVEH 64
Query: 244 VSFFFRKPDVSDIVIFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLLVNGVAE 303
VS K D+V+ +P +P+ KR+VA GD V D
Sbjct: 65 VSPRIGKVGHGDLVLVKSP--------LNPNRNLTKRVVAMEGDTVTYFD---------- 106
Query: 304 EEDYVLEPLNYELDRM-VVPKGHVYVLGDNRNRSFDSHNWGPLPVENILG 352
PLN E R+ VVPKGHV++ GDN S DS ++GP+P I G
Sbjct: 107 -------PLNSEDSRIAVVPKGHVWIQGDNVYASRDSRHFGPVPYGLIRG 149
>Medtr8g039980.1 | inner membrane protease subunit-like protein | HC
| chr8:14867930-14869175 | 20130731
Length = 193
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 216 SFLAEPRSIPSASMYPTLEVGDRI-LAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPS 274
+L +P SM PT++V + LAE++S F K DIVI +P +P
Sbjct: 30 KYLIDPVQTIGPSMLPTIDVTPSLYLAERISPRFGKAAQGDIVILRSPR--------NPR 81
Query: 275 DVFIKRIVAKAGDIVEVRDGKLLVNGVAEEEDYVLEP-LNYELDRMVVPKGHVYVLGDNR 333
KR+V GD + YV +P + + + +VVPKGHV++ GDN+
Sbjct: 82 MCITKRLVGLEGDTIT----------------YVADPNKDDKQETVVVPKGHVWIEGDNK 125
Query: 334 NRSFDSHNWGPLP 346
+S DS N+GP+P
Sbjct: 126 YKSNDSRNFGPVP 138
>Medtr8g039980.2 | inner membrane protease subunit-like protein | HC
| chr8:14866261-14869549 | 20130731
Length = 162
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 26/132 (19%)
Query: 217 FLAEPRSIPSASMYPTLEVGDRI-LAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSD 275
+L +P SM PT++V + LAE++S F K DIVI +P +P
Sbjct: 31 YLIDPVQTIGPSMLPTIDVTPSLYLAERISPRFGKAAQGDIVILRSP--------RNPRM 82
Query: 276 VFIKRIVAKAGDIVEVRDGKLLVNGVAEEEDYVLEP-LNYELDRMVVPKGHVYVLGDNRN 334
KR+V GD + YV +P + + + +VVPKGHV++ GDN+
Sbjct: 83 CITKRLVGLEGDTIT----------------YVADPNKDDKQETVVVPKGHVWIEGDNKY 126
Query: 335 RSFDSHNWGPLP 346
+S DS N+GP+P
Sbjct: 127 KSNDSRNFGPVP 138
>Medtr8g039980.3 | inner membrane protease subunit-like protein | HC
| chr8:14866261-14869549 | 20130731
Length = 162
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 26/132 (19%)
Query: 217 FLAEPRSIPSASMYPTLEVGDRI-LAEKVSFFFRKPDVSDIVIFTAPPILVEKLDFSPSD 275
+L +P SM PT++V + LAE++S F K DIVI +P +P
Sbjct: 31 YLIDPVQTIGPSMLPTIDVTPSLYLAERISPRFGKAAQGDIVILRSP--------RNPRM 82
Query: 276 VFIKRIVAKAGDIVEVRDGKLLVNGVAEEEDYVLEP-LNYELDRMVVPKGHVYVLGDNRN 334
KR+V GD + YV +P + + + +VVPKGHV++ GDN+
Sbjct: 83 CITKRLVGLEGDTIT----------------YVADPNKDDKQETVVVPKGHVWIEGDNKY 126
Query: 335 RSFDSHNWGPLP 346
+S DS N+GP+P
Sbjct: 127 KSNDSRNFGPVP 138
>Medtr8g039990.1 | inner membrane protease subunit 1 | HC |
chr8:14871855-14874667 | 20130731
Length = 201
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 199 EDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLE-VGDRILAEKVSFFFRKPDVSDIV 257
+D A V + +++L ASM PT++ LAE++S F K DIV
Sbjct: 13 KDVFFVVKAYCVLHVTENYLITLVKTEGASMLPTIDSTPSMFLAERISPRFGKVAHGDIV 72
Query: 258 IFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLLVNGVAEEEDYVLEPLN-YEL 316
+P +P + + KR++ GD + Y+ + N Y+
Sbjct: 73 RLRSPQ--------NPRESYGKRVIGLEGDSIT----------------YIADRGNGYKH 108
Query: 317 DRMVVPKGHVYVLGDNRNRSFDSHNWGPLP 346
+ +VVPKGHV+V GDN+ S+DS ++GP+P
Sbjct: 109 ETVVVPKGHVWVEGDNKFSSYDSRSFGPVP 138
>Medtr8g039990.2 | inner membrane protease subunit 1 | HC |
chr8:14870537-14872981 | 20130731
Length = 162
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 199 EDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLE-VGDRILAEKVSFFFRKPDVSDIV 257
+D A V + +++L ASM PT++ LAE++S F K DIV
Sbjct: 13 KDVFFVVKAYCVLHVTENYLITLVKTEGASMLPTIDSTPSMFLAERISPRFGKVAHGDIV 72
Query: 258 IFTAPPILVEKLDFSPSDVFIKRIVAKAGDIVEVRDGKLLVNGVAEEEDYVLEPLN-YEL 316
+P +P + + KR++ GD + Y+ + N Y+
Sbjct: 73 RLRSPQ--------NPRESYGKRVIGLEGDSIT----------------YIADRGNGYKH 108
Query: 317 DRMVVPKGHVYVLGDNRNRSFDSHNWGPLP 346
+ +VVPKGHV+V GDN+ S+DS ++GP+P
Sbjct: 109 ETVVVPKGHVWVEGDNKFSSYDSRSFGPVP 138