Miyakogusa Predicted Gene

Lj0g3v0127809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127809.1 Non Characterized Hit- tr|D8SZT3|D8SZT3_SELML
Putative uncharacterized protein OS=Selaginella
moelle,63.01,9e-19,TPT,Domain of unknown function DUF250,CUFF.7702.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g085160.1 | UDP-sugar transporter-like protein | HC | chr2...   104   2e-23
Medtr2g085160.2 | UDP-sugar transporter-like protein | HC | chr2...   104   2e-23
Medtr1g012590.1 | UDP-sugar transporter-like protein | HC | chr1...    75   1e-14
Medtr1g012590.2 | UDP-sugar transporter-like protein | HC | chr1...    72   1e-13

>Medtr2g085160.1 | UDP-sugar transporter-like protein | HC |
           chr2:33297757-33299658 | 20130731
          Length = 271

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 59/73 (80%)

Query: 1   MWCNGIICGPILLIWTLVRGDLKMTVNFPDLLSPGFMVVLLSSCILAFFLNYCIFLNTTL 60
           +W N +ICGPI+ +W+L+RGDL+ T+NFP L SPGF VV++ SC   FF+NY + LNTT+
Sbjct: 156 LWSNVLICGPIMFLWSLLRGDLQSTLNFPYLFSPGFQVVMVMSCAFTFFINYIVVLNTTV 215

Query: 61  NSALTQTICGNMK 73
           NSALTQ ICGN+K
Sbjct: 216 NSALTQAICGNLK 228


>Medtr2g085160.2 | UDP-sugar transporter-like protein | HC |
           chr2:33296899-33300046 | 20130731
          Length = 330

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 59/73 (80%)

Query: 1   MWCNGIICGPILLIWTLVRGDLKMTVNFPDLLSPGFMVVLLSSCILAFFLNYCIFLNTTL 60
           +W N +ICGPI+ +W+L+RGDL+ T+NFP L SPGF VV++ SC   FF+NY + LNTT+
Sbjct: 215 LWSNVLICGPIMFLWSLLRGDLQSTLNFPYLFSPGFQVVMVMSCAFTFFINYIVVLNTTV 274

Query: 61  NSALTQTICGNMK 73
           NSALTQ ICGN+K
Sbjct: 275 NSALTQAICGNLK 287


>Medtr1g012590.1 | UDP-sugar transporter-like protein | HC |
           chr1:2543649-2548731 | 20130731
          Length = 278

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 6/52 (11%)

Query: 1   MWCNGIICGPILLIWTLVRGDLKMTVNFPDLLSPGFMVVLLSSCILAFFLNY 52
           MWCNGI+CGP+LLIWT +RGDLK T++FP L SPGF+V      IL+FF  Y
Sbjct: 229 MWCNGILCGPVLLIWTFIRGDLKTTIDFPYLFSPGFLV------ILSFFYAY 274


>Medtr1g012590.2 | UDP-sugar transporter-like protein | HC |
           chr1:2543659-2548621 | 20130731
          Length = 269

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 34/38 (89%)

Query: 1   MWCNGIICGPILLIWTLVRGDLKMTVNFPDLLSPGFMV 38
           MWCNGI+CGP+LLIWT +RGDLK T++FP L SPGF+V
Sbjct: 229 MWCNGILCGPVLLIWTFIRGDLKTTIDFPYLFSPGFLV 266