Miyakogusa Predicted Gene

Lj0g3v0127549.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127549.1 CUFF.7678.1
         (468 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g033720.1 | F-box/LRR protein | HC | chr7:12311206-1231294...   546   e-155
Medtr7g033720.2 | F-box/LRR protein | HC | chr7:12311263-1231288...   341   1e-93
Medtr4g013255.1 | F-box/LRR protein | HC | chr4:3659491-3663944 ...    61   2e-09
Medtr2g021030.2 | F-box/LRR protein | HC | chr2:7104633-7097070 ...    54   4e-07
Medtr2g021030.1 | F-box/LRR protein | HC | chr2:7104633-7097070 ...    53   5e-07
Medtr1g012520.1 | EIN3-binding F-box-like protein | HC | chr1:25...    53   8e-07
Medtr5g095830.1 | F-box/LRR protein | LC | chr5:41899987-4190286...    51   3e-06
Medtr7g112570.1 | F-box/LRR protein | HC | chr7:46304931-4631002...    50   6e-06

>Medtr7g033720.1 | F-box/LRR protein | HC | chr7:12311206-12312946 |
           20130731
          Length = 460

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/471 (62%), Positives = 337/471 (71%), Gaps = 14/471 (2%)

Query: 1   MDNVLCDELLQEIFQKLPXXXXXXXXLVSKRWLHLFRSSRXXXXXXXXXXXXXXXXXXXX 60
           M+N L DELLQEIFQKLP        LVSKRWLHL+RSS+                    
Sbjct: 1   MENSLYDELLQEIFQKLPSSSFSSISLVSKRWLHLYRSSKTSLSLRFNNQHLSSFISFLN 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXAVSSCCSQLRALRFLTGPVSLRSINSLANSCTHL 120
                                       SS   +L +L+FL  P+ L SI SL+NSCT L
Sbjct: 61  QHPSLSSLSLILLSSSPSTTPLLLSVISSS---KLLSLKFLAAPLPLSSITSLSNSCTKL 117

Query: 121 SSLCISLSRPIFLRWVLEFPCLKDLSIVLCSGDENGSSHEDEVNGQFGVWESDDVDAELG 180
           +SL I+LSRPIFL WVL FPCLK LS+V CS +E        VN Q  V+ESDD D ELG
Sbjct: 118 TSLSITLSRPIFLNWVLLFPCLKHLSVVFCSSEE--------VNFQNCVFESDDFDKELG 169

Query: 181 LESLCFVGIRGDDWGLGWLWKSCRKLKKLRLQSCQGIGGSYSCFVQCLQGVREIELRTCR 240
           LESLCF  IRGDDWG+GWLWK CR LKKL+L SCQGIGGSYSCFVQCLQG+++IEL+TCR
Sbjct: 170 LESLCFENIRGDDWGIGWLWKRCRNLKKLKLLSCQGIGGSYSCFVQCLQGIQQIELKTCR 229

Query: 241 SVVDGVLLKLAENSHSLNSLLVHDGGSREGLLHFFSQCRSXXXXXX---XXXXXXXXXXX 297
           SVVDGVLL LA++ +SL SLLVHDGGSREGLLHFFS C S                    
Sbjct: 230 SVVDGVLLNLAQHCNSLESLLVHDGGSREGLLHFFSNCSSNNLHKLDFRLPMDLENNHLF 289

Query: 298 XSAVAVNFRNLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLATLG 357
             A+  NFR LSS+RLQSCCLVTGEGLK +++A SNGLEELALINCDVVERE GLLATLG
Sbjct: 290 AIAMTTNFRGLSSIRLQSCCLVTGEGLKVLSVALSNGLEELALINCDVVEREKGLLATLG 349

Query: 358 QHLRQLRKLDLSHNEMLLDKELISMLVSCVNLIDLRLRGCKGITSAAMVSMLRSCKRLEN 417
           QHLRQL+KLDLSHNEML DK+ ISMLVSC++L+DL++RGCKG+T+ A+V+M+RSCKRLEN
Sbjct: 350 QHLRQLKKLDLSHNEMLFDKDFISMLVSCIHLVDLKVRGCKGLTNLALVTMVRSCKRLEN 409

Query: 418 VDMMQCLGIESEAIELFVKNSSRLRRMEVEESKLSDAAKMWASNKFIEVVV 468
           VD+M CLGIES AIELFVKN S LRR+EVE SKLSDA K+WASNKFIE+V+
Sbjct: 410 VDVMHCLGIESMAIELFVKNCSHLRRLEVEGSKLSDATKLWASNKFIELVL 460


>Medtr7g033720.2 | F-box/LRR protein | HC | chr7:12311263-12312888 |
           20130731
          Length = 393

 Score =  341 bits (874), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 180/284 (63%), Positives = 214/284 (75%), Gaps = 14/284 (4%)

Query: 199 LWKSCRKLKKLRLQSCQGIGGSYSCFVQCL-----------QGVREIELRTCRSVVDGVL 247
           L  SC KL  L +   + I  ++     CL           +G+++IEL+TCRSVVDGVL
Sbjct: 110 LSNSCTKLTSLSITLSRPIFLNWVLLFPCLKHLSVVFCSSEEGIQQIELKTCRSVVDGVL 169

Query: 248 LKLAENSHSLNSLLVHDGGSREGLLHFFSQCRSXXXXXX---XXXXXXXXXXXXSAVAVN 304
           L LA++ +SL SLLVHDGGSREGLLHFFS C S                      A+  N
Sbjct: 170 LNLAQHCNSLESLLVHDGGSREGLLHFFSNCSSNNLHKLDFRLPMDLENNHLFAIAMTTN 229

Query: 305 FRNLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLATLGQHLRQLR 364
           FR LSS+RLQSCCLVTGEGLK +++A SNGLEELALINCDVVERE GLLATLGQHLRQL+
Sbjct: 230 FRGLSSIRLQSCCLVTGEGLKVLSVALSNGLEELALINCDVVEREKGLLATLGQHLRQLK 289

Query: 365 KLDLSHNEMLLDKELISMLVSCVNLIDLRLRGCKGITSAAMVSMLRSCKRLENVDMMQCL 424
           KLDLSHNEML DK+ ISMLVSC++L+DL++RGCKG+T+ A+V+M+RSCKRLENVD+M CL
Sbjct: 290 KLDLSHNEMLFDKDFISMLVSCIHLVDLKVRGCKGLTNLALVTMVRSCKRLENVDVMHCL 349

Query: 425 GIESEAIELFVKNSSRLRRMEVEESKLSDAAKMWASNKFIEVVV 468
           GIES AIELFVKN S LRR+EVE SKLSDA K+WASNKFIE+V+
Sbjct: 350 GIESMAIELFVKNCSHLRRLEVEGSKLSDATKLWASNKFIELVL 393



 Score =  109 bits (272), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 80/154 (51%), Gaps = 3/154 (1%)

Query: 1   MDNVLCDELLQEIFQKLPXXXXXXXXLVSKRWLHLFRSSRXXXXXXXXXXXXXXXXXXXX 60
           M+N L DELLQEIFQKLP        LVSKRWLHL+RSS+                    
Sbjct: 1   MENSLYDELLQEIFQKLPSSSFSSISLVSKRWLHLYRSSKTSLSLRFNNQHLSSFISFLN 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXAVSSCCSQLRALRFLTGPVSLRSINSLANSCTHL 120
                                       SS   +L +L+FL  P+ L SI SL+NSCT L
Sbjct: 61  QHPSLSSLSLILLSSSPSTTPLLLSVISSS---KLLSLKFLAAPLPLSSITSLSNSCTKL 117

Query: 121 SSLCISLSRPIFLRWVLEFPCLKDLSIVLCSGDE 154
           +SL I+LSRPIFL WVL FPCLK LS+V CS +E
Sbjct: 118 TSLSITLSRPIFLNWVLLFPCLKHLSVVFCSSEE 151


>Medtr4g013255.1 | F-box/LRR protein | HC | chr4:3659491-3663944 |
           20130731
          Length = 669

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 10/278 (3%)

Query: 181 LESLCFVGIRGDDWGLGWLWKSCRKLKKLRLQSCQGIGGSYSCFVQCL-QGVREIELRTC 239
           L+S+   G      GL  +   C  L++L L  C G+      FV    + +R++++  C
Sbjct: 310 LQSIILDGCNITSDGLKAIGNLCISLRELSLSKCSGVTDDALSFVVSKHKDLRKLDITCC 369

Query: 240 RSVVDGVLLKLAENSHSLNSLLVHDGG--SREGLLHFFSQCRSXXXXXXXXXXXXXXXXX 297
           R + D  +  +A    SL SL +      S E  +    +C                   
Sbjct: 370 RKITDVSIASIANACRSLTSLKMESCTLVSSEAYILIGQKCHYLEELDLTDNEIDDEGLE 429

Query: 298 XSAVAVNFRNLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLATLG 357
             +       LSSL+L  C  +T +G+  + +  S  L+EL L  C  V  + G+ A + 
Sbjct: 430 SIS---RCSRLSSLKLGICLNITDKGVANVGMCCSK-LKELDLYRCTGVT-DLGISA-IA 483

Query: 358 QHLRQLRKLDLSHNEMLLDKELISMLVSCVNLIDLRLRGCKGITSAAMVSMLRSCKRLEN 417
                L+ ++ ++   + D+ L S L  CVNL  L +RGC  +TS  +  +  +CK+L  
Sbjct: 484 SGCPSLQMINAAYCTSITDRALFS-LSKCVNLQTLEIRGCFLVTSFGLTCIAMNCKQLSR 542

Query: 418 VDMMQCLGIESEAIELFVKNSSRLRRMEVEESKLSDAA 455
           +D+ +C  I+   +      S  LR++ +  + ++D  
Sbjct: 543 LDLKKCYNIDDSGMVPLAHFSQNLRQINLSYTSVTDVG 580


>Medtr2g021030.2 | F-box/LRR protein | HC | chr2:7104633-7097070 |
           20130731
          Length = 458

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 50/248 (20%)

Query: 185 CFVGIRGDDWGLGWLWKSCRKLKKLRLQSCQGIGGSYSCFVQCLQGV----REIELRTCR 240
           C+VG    D GL  + + C++L+ L L+ C+G+  + +  V+   GV    + + +  C 
Sbjct: 176 CYVG----DQGLAAVGQRCKQLEDLNLRFCEGL--TDTGLVELALGVGKSLKSLGVAACA 229

Query: 241 SVVDGVLLKLAENSHSLNSL-----LVHDGGSREGLLHFFSQCRSXXXXXXXXXXXXXXX 295
            + D  +  +A +  SL +L      VH+    +G+L                       
Sbjct: 230 KITDISMEAVASHCGSLETLSLDSEFVHN----QGVL----------------------- 262

Query: 296 XXXSAVAVNFRNLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLAT 355
               AVA    +L SL+LQ C  +T + LKA+ ++  + LE LAL +      + GL A 
Sbjct: 263 ----AVAKGCPHLKSLKLQ-CINLTDDALKAVGVSCLS-LELLALYSFQRFT-DKGLRA- 314

Query: 356 LGQHLRQLRKLDLSHNEMLLDKELISMLVSCVNLIDLRLRGCKGITSAAMVSMLRSCKRL 415
           +G   ++L+ L LS    L DK L ++   C  L  L + GC  I +  + S+ +SC  L
Sbjct: 315 IGNGCKKLKNLTLSDCYFLSDKGLEAIATGCKELTHLEVNGCHNIGTLGLDSVGKSCLHL 374

Query: 416 ENVDMMQC 423
             + ++ C
Sbjct: 375 SELALLYC 382


>Medtr2g021030.1 | F-box/LRR protein | HC | chr2:7104633-7097070 |
           20130731
          Length = 610

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 50/248 (20%)

Query: 185 CFVGIRGDDWGLGWLWKSCRKLKKLRLQSCQGIGGSYSCFVQCLQGV----REIELRTCR 240
           C+VG    D GL  + + C++L+ L L+ C+G+  + +  V+   GV    + + +  C 
Sbjct: 176 CYVG----DQGLAAVGQRCKQLEDLNLRFCEGL--TDTGLVELALGVGKSLKSLGVAACA 229

Query: 241 SVVDGVLLKLAENSHSLNSL-----LVHDGGSREGLLHFFSQCRSXXXXXXXXXXXXXXX 295
            + D  +  +A +  SL +L      VH+    +G+L                       
Sbjct: 230 KITDISMEAVASHCGSLETLSLDSEFVHN----QGVL----------------------- 262

Query: 296 XXXSAVAVNFRNLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLAT 355
               AVA    +L SL+LQ C  +T + LKA+ ++  + LE LAL +      + GL A 
Sbjct: 263 ----AVAKGCPHLKSLKLQ-CINLTDDALKAVGVSCLS-LELLALYSFQRFT-DKGLRA- 314

Query: 356 LGQHLRQLRKLDLSHNEMLLDKELISMLVSCVNLIDLRLRGCKGITSAAMVSMLRSCKRL 415
           +G   ++L+ L LS    L DK L ++   C  L  L + GC  I +  + S+ +SC  L
Sbjct: 315 IGNGCKKLKNLTLSDCYFLSDKGLEAIATGCKELTHLEVNGCHNIGTLGLDSVGKSCLHL 374

Query: 416 ENVDMMQC 423
             + ++ C
Sbjct: 375 SELALLYC 382


>Medtr1g012520.1 | EIN3-binding F-box-like protein | HC |
           chr1:2502649-2506197 | 20130731
          Length = 643

 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)

Query: 319 VTGEGLKAIAIATSNGLEELALINCDVVEREPGLLATLGQHLRQLRKLDLSHNEMLLDKE 378
           VT  GLKA+A    + L+  +L N   V  E GL+  +    ++L KLDL     + DK 
Sbjct: 176 VTTLGLKAVASGCPS-LKSFSLWNVSSVGDE-GLI-EIANGCQKLEKLDLCKCPAISDKA 232

Query: 379 LISMLVSCVNLIDLRLRGCKGITSAAMVSMLRSCKRLENVDMMQCLGIESEAIE-LFVKN 437
           LI++   C NL +L L  C  I +  + ++ + C  L+ + +  C G+  + I  LF   
Sbjct: 233 LITVAKKCPNLTELSLESCPSIRNEGLQAIGKFCPNLKAISIKDCAGVGDQGIAGLFSST 292

Query: 438 SSRLRRMEVEESKLSD 453
           S  L +++++   +SD
Sbjct: 293 SLVLTKVKLQALAVSD 308


>Medtr5g095830.1 | F-box/LRR protein | LC | chr5:41899987-41902867 |
           20130731
          Length = 649

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 20/266 (7%)

Query: 195 GLGWLWKSCRKLKKLRLQSCQGIGGSYSCFVQCLQG-VREIELRTCRSVVDGVLLKLAEN 253
           G+  L   C+ LK L L++   +   +   +    G +  I L +C  V       L  N
Sbjct: 336 GIICLLSKCQHLKHLDLENAVFLKDEHVVEMSSFLGDLVSINLASCPMVTVSAFFVLLRN 395

Query: 254 SHSLNSLLVHDGG-------SREGLLHFFSQCRSXXXXXXXXXXXXXXXXXXSAVAVNFR 306
             SL  + + D G       S   L++F +  +                   +  A  F 
Sbjct: 396 CPSLGDINMEDTGIGKESLESSRSLMNFVAYPQ--LKYLRLAHNPWLFDEDITMFASIFP 453

Query: 307 NLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLATLGQHLRQLRKL 366
           NL  L L +CC +  EG+  +     N +  L L  C +V  E      +   + +L  L
Sbjct: 454 NLQLLDLSNCCRIFEEGIVQVLRMCCN-IRHLNLSKCSIVRLE------IDFEVPKLEVL 506

Query: 367 DLSHNEMLLDKELISMLV-SCVNLIDLRLRGCKGITSAAMVSMLRSCKRLENVDMMQCLG 425
           +LS+ ++  D E + M+  SC  L+ L L+ C  +T   +  ++ +C +L  + +  C  
Sbjct: 507 NLSYTKV--DDEALYMISKSCCGLLKLSLQDCNDVTKKGVKHVVENCTQLRKISLNGCFK 564

Query: 426 IESEAIELFVKNSSRLRRMEVEESKL 451
           + +  + L V +   LRR+    + +
Sbjct: 565 VHANVVSLMVFSRPSLRRIRAPPAPM 590


>Medtr7g112570.1 | F-box/LRR protein | HC | chr7:46304931-46310023 |
           20130731
          Length = 679

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 110/276 (39%), Gaps = 24/276 (8%)

Query: 188 GIRGDDWGLGWLWKSCRKLKKLRLQSCQGIGGSYSCFVQCLQGVREIELRTCRSVVDGVL 247
           G+R  D+ L  +  +C+ L +L L  C G+       V     +  ++L  CR V D  +
Sbjct: 347 GVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAI 406

Query: 248 LKLAENSHSLNSLLVH--DGGSREGLLHFFSQCRSXXXXXXXXXXXXXXXXXXSAVAVNF 305
             +A +  +L  L +   D  +  GL    S C                    + +A+ +
Sbjct: 407 STIANSCPNLACLKLESCDMVTEIGLYQIGSSC------LMLEELDLTDCSGVNDIALKY 460

Query: 306 ----RNLSSLRLQSCCLVTGEGLKAIAIATSNGLEELALINCDVVEREPGLLATLGQHLR 361
                 L  L+L  C  ++  GL  IA      L EL L  C  +  +   LA L     
Sbjct: 461 LSRCSKLVRLKLGLCTNISDIGLAHIA-CNCPKLTELDLYRCVRIGDDG--LAALTTGCN 517

Query: 362 QLRKLDLSHNEMLLDKELISMLVSCVN----LIDLRLRGCKGITSAAMVSMLRSCKRLEN 417
           +L  L+L++   + D  L      C++    L D  LRG   ITS  + ++  SCKRL N
Sbjct: 518 KLAMLNLAYCNRITDAGL-----KCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLAN 572

Query: 418 VDMMQCLGIESEAIELFVKNSSRLRRMEVEESKLSD 453
           +D+  C  ++          S  L ++ +    +SD
Sbjct: 573 LDLKHCEKLDDTGFRALAFYSQNLLQINMSYCNVSD 608