Miyakogusa Predicted Gene

Lj0g3v0127239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127239.1 Non Characterized Hit- tr|Q6Z2Y3|Q6Z2Y3_ORYSJ
Putative uncharacterized protein OJ1008_C03.26-2
OS=Or,73.08,6e-16,seg,NULL,CUFF.7659.1
         (326 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g093330.2 | hypothetical protein | HC | chr3:42654562-4265...   324   6e-89
Medtr3g093330.1 | hypothetical protein | HC | chr3:42654648-4265...   324   6e-89
Medtr3g093330.3 | hypothetical protein | HC | chr3:42654485-4265...   324   6e-89

>Medtr3g093330.2 | hypothetical protein | HC |
           chr3:42654562-42650830 | 20130731
          Length = 416

 Score =  324 bits (831), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 186/322 (57%), Positives = 215/322 (66%), Gaps = 10/322 (3%)

Query: 1   MSSSRESSPDWLRSFQAPXXXXXXXXXXXXXX-XXXXXXXNEDKTDGEGSSPKSPKLPKV 59
           MSSS +SSPDWLRS+Q P                      +ED  D E SSPKSPK  K 
Sbjct: 1   MSSSGDSSPDWLRSYQVPTPNSPVTLSSDSEYLHDSRSFSDEDIIDDEDSSPKSPKNLKA 60

Query: 60  NKNKSTPLAASSARSRKTLKVETLEIEDPTPPRRKKLDKLKENEGNSEEKKIMIESNVDK 119
           NKNK     ++ + ++KTL+ ++L IED  PP RKKL   K+  G  EEKKI ++S+ DK
Sbjct: 61  NKNK----GSAKSSTKKTLERKSLTIEDEAPPTRKKLYTRKDKNGKKEEKKIKLDSDTDK 116

Query: 120 HIDHKESIHSIWNLTSDSESCHDHSPKREDHIDQVETSQQQISQILGEGERGDGISIGKD 179
             +HKESIHS+W L+SDSESC DHSPK ED IDQVET + Q SQ  GE    DG+    D
Sbjct: 117 EAEHKESIHSMWELSSDSESCRDHSPKTEDQIDQVET-KPQTSQPPGE----DGLLRDND 171

Query: 180 GXXXXXXXXXXXXXXXQIDTEGCTPVXXXXXXXXXXXXDNDGDVEAAEEETFEKLVEPNV 239
           G               Q D E CTPV              DGDVE  +EETFEK VEPNV
Sbjct: 172 GKSPSKKASKAKASQKQTDLEDCTPVKGKKTKVNAKGKGGDGDVEVKDEETFEKPVEPNV 231

Query: 240 SSSMLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDAPSGDKEMCLDLKGTIY 299
           SSS+LPLMLSEKVHRTKAL+ECQGDSIDLSGDMGAVGR+IISD+PSGD+EMCLDLKGTIY
Sbjct: 232 SSSILPLMLSEKVHRTKALVECQGDSIDLSGDMGAVGRVIISDSPSGDQEMCLDLKGTIY 291

Query: 300 KTSIVPCRTFCVVSFGQSEAKV 321
           KTSI+P RTFCVVSFGQ+EAK+
Sbjct: 292 KTSIIPSRTFCVVSFGQTEAKI 313


>Medtr3g093330.1 | hypothetical protein | HC |
           chr3:42654648-42650830 | 20130731
          Length = 416

 Score =  324 bits (831), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 186/322 (57%), Positives = 215/322 (66%), Gaps = 10/322 (3%)

Query: 1   MSSSRESSPDWLRSFQAPXXXXXXXXXXXXXX-XXXXXXXNEDKTDGEGSSPKSPKLPKV 59
           MSSS +SSPDWLRS+Q P                      +ED  D E SSPKSPK  K 
Sbjct: 1   MSSSGDSSPDWLRSYQVPTPNSPVTLSSDSEYLHDSRSFSDEDIIDDEDSSPKSPKNLKA 60

Query: 60  NKNKSTPLAASSARSRKTLKVETLEIEDPTPPRRKKLDKLKENEGNSEEKKIMIESNVDK 119
           NKNK     ++ + ++KTL+ ++L IED  PP RKKL   K+  G  EEKKI ++S+ DK
Sbjct: 61  NKNK----GSAKSSTKKTLERKSLTIEDEAPPTRKKLYTRKDKNGKKEEKKIKLDSDTDK 116

Query: 120 HIDHKESIHSIWNLTSDSESCHDHSPKREDHIDQVETSQQQISQILGEGERGDGISIGKD 179
             +HKESIHS+W L+SDSESC DHSPK ED IDQVET + Q SQ  GE    DG+    D
Sbjct: 117 EAEHKESIHSMWELSSDSESCRDHSPKTEDQIDQVET-KPQTSQPPGE----DGLLRDND 171

Query: 180 GXXXXXXXXXXXXXXXQIDTEGCTPVXXXXXXXXXXXXDNDGDVEAAEEETFEKLVEPNV 239
           G               Q D E CTPV              DGDVE  +EETFEK VEPNV
Sbjct: 172 GKSPSKKASKAKASQKQTDLEDCTPVKGKKTKVNAKGKGGDGDVEVKDEETFEKPVEPNV 231

Query: 240 SSSMLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDAPSGDKEMCLDLKGTIY 299
           SSS+LPLMLSEKVHRTKAL+ECQGDSIDLSGDMGAVGR+IISD+PSGD+EMCLDLKGTIY
Sbjct: 232 SSSILPLMLSEKVHRTKALVECQGDSIDLSGDMGAVGRVIISDSPSGDQEMCLDLKGTIY 291

Query: 300 KTSIVPCRTFCVVSFGQSEAKV 321
           KTSI+P RTFCVVSFGQ+EAK+
Sbjct: 292 KTSIIPSRTFCVVSFGQTEAKI 313


>Medtr3g093330.3 | hypothetical protein | HC |
           chr3:42654485-42650830 | 20130731
          Length = 416

 Score =  324 bits (831), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 186/322 (57%), Positives = 215/322 (66%), Gaps = 10/322 (3%)

Query: 1   MSSSRESSPDWLRSFQAPXXXXXXXXXXXXXX-XXXXXXXNEDKTDGEGSSPKSPKLPKV 59
           MSSS +SSPDWLRS+Q P                      +ED  D E SSPKSPK  K 
Sbjct: 1   MSSSGDSSPDWLRSYQVPTPNSPVTLSSDSEYLHDSRSFSDEDIIDDEDSSPKSPKNLKA 60

Query: 60  NKNKSTPLAASSARSRKTLKVETLEIEDPTPPRRKKLDKLKENEGNSEEKKIMIESNVDK 119
           NKNK     ++ + ++KTL+ ++L IED  PP RKKL   K+  G  EEKKI ++S+ DK
Sbjct: 61  NKNK----GSAKSSTKKTLERKSLTIEDEAPPTRKKLYTRKDKNGKKEEKKIKLDSDTDK 116

Query: 120 HIDHKESIHSIWNLTSDSESCHDHSPKREDHIDQVETSQQQISQILGEGERGDGISIGKD 179
             +HKESIHS+W L+SDSESC DHSPK ED IDQVET + Q SQ  GE    DG+    D
Sbjct: 117 EAEHKESIHSMWELSSDSESCRDHSPKTEDQIDQVET-KPQTSQPPGE----DGLLRDND 171

Query: 180 GXXXXXXXXXXXXXXXQIDTEGCTPVXXXXXXXXXXXXDNDGDVEAAEEETFEKLVEPNV 239
           G               Q D E CTPV              DGDVE  +EETFEK VEPNV
Sbjct: 172 GKSPSKKASKAKASQKQTDLEDCTPVKGKKTKVNAKGKGGDGDVEVKDEETFEKPVEPNV 231

Query: 240 SSSMLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDAPSGDKEMCLDLKGTIY 299
           SSS+LPLMLSEKVHRTKAL+ECQGDSIDLSGDMGAVGR+IISD+PSGD+EMCLDLKGTIY
Sbjct: 232 SSSILPLMLSEKVHRTKALVECQGDSIDLSGDMGAVGRVIISDSPSGDQEMCLDLKGTIY 291

Query: 300 KTSIVPCRTFCVVSFGQSEAKV 321
           KTSI+P RTFCVVSFGQ+EAK+
Sbjct: 292 KTSIIPSRTFCVVSFGQTEAKI 313