Miyakogusa Predicted Gene
- Lj0g3v0127099.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0127099.2 tr|G7KGD4|G7KGD4_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_5g02,74.72,0,SWIB/MDM2 domain,SWIB/MDM2 domain; GYF domain,GYF;
FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; ,CUFF.7851.2
(1276 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g021500.1 | zinc finger CCCH domain protein | HC | chr5:83... 1787 0.0
Medtr3g117490.1 | zinc finger CCCH domain protein | HC | chr3:54... 623 e-178
Medtr5g021450.1 | GYF domain protein | HC | chr5:8294173-8289658... 311 2e-84
Medtr5g021450.2 | GYF domain protein | HC | chr5:8294173-8289710... 311 3e-84
Medtr3g064260.1 | zinc finger CCCH domain protein | LC | chr3:28... 254 5e-67
Medtr3g064250.1 | zinc finger CCCH domain protein | LC | chr3:28... 250 6e-66
Medtr3g064270.1 | zinc finger CCCH domain protein | LC | chr3:28... 234 4e-61
Medtr3g064280.1 | zinc finger CCCH domain protein | LC | chr3:28... 219 1e-56
Medtr3g064300.1 | zinc ion-binding/DNA-binding protein, putative... 109 2e-23
Medtr6g065790.1 | GYF domain protein | LC | chr6:24383562-243807... 69 3e-11
Medtr6g065790.2 | GYF domain protein | LC | chr6:24383562-243807... 69 3e-11
Medtr7g088260.1 | cyclin-like F-box protein | LC | chr7:34357570... 60 1e-08
>Medtr5g021500.1 | zinc finger CCCH domain protein | HC |
chr5:8311147-8303973 | 20130731
Length = 1265
Score = 1787 bits (4629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 907/1246 (72%), Positives = 990/1246 (79%), Gaps = 44/1246 (3%)
Query: 39 APAVADGV------VLKRKRGRPAKGVSKTAXXXXXXKQPEDEEDVCFICFDGGSLVLCD 92
AP V V V+K+KRGRPAKG K A K+ ++EDVCFICFDGGSLVLCD
Sbjct: 56 APKVVLAVIAENSEVMKKKRGRPAKGTPKVAPPPKQIKK--EDEDVCFICFDGGSLVLCD 113
Query: 93 RRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYMCYTCTYSVCKGCIDDAD 152
RRGCPKAYHPACVKRDEAFF SKAKWNCGWHICSSC+KASHYMCYTCTYS+CKGCI +AD
Sbjct: 114 RRGCPKAYHPACVKRDEAFFRSKAKWNCGWHICSSCQKASHYMCYTCTYSLCKGCIKNAD 173
Query: 153 FVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWEYLFKVYWMYLKEKLSLT 212
FV VRGNKGLCGIC KTIMLIE SA GNK+ CEVDFDDKSSWEYLFKVYW LKE LSLT
Sbjct: 174 FVSVRGNKGLCGICKKTIMLIENSAHGNKEMCEVDFDDKSSWEYLFKVYWTLLKENLSLT 233
Query: 213 FDEILRARNSCKVAAPMSSKLHTPHELYHLKDEKGSGSENSCIDLESNNLKNKRPKRQQK 272
FDE+L+A+N AAPM + T H+LYHLK+EKGSG ENSC+D+ESNNLKNK+PK
Sbjct: 234 FDELLQAKNPLSAAAPM---VQTSHKLYHLKNEKGSGFENSCVDIESNNLKNKKPKG--- 287
Query: 273 FLNKGDCVDRITSGSDTGVSLPEGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYV 332
SG DTG+SLPE +WASKELLEFV+HMKNGDTS+L+QFDVQ LLLEYV
Sbjct: 288 -----------PSGGDTGMSLPECKRWASKELLEFVSHMKNGDTSILSQFDVQNLLLEYV 336
Query: 333 KKNNLRDPQQKSQIVCDFRLLKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAIID 392
KKNNLRDPQQKS IVCD RL+ LFGKAR+GYIEML+LLEPHFL+K+N+ A N FGA I D
Sbjct: 337 KKNNLRDPQQKSLIVCDSRLVNLFGKARLGYIEMLMLLEPHFLIKENTPAENNFGAGISD 396
Query: 393 AAANEGEATDDYNKQLMLVNDKKCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNLV 452
A AN EA D N+Q +LVNDK+C TSKKAD+ VPQNN DAYA+++ HNINLIYLRR+L+
Sbjct: 397 AVANGKEAIDSNNRQSVLVNDKRC-TSKKADMPVPQNNQDAYASINAHNINLIYLRRSLM 455
Query: 453 ESLTIDTEKINENVAGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEHYQIGTRTTDIKLE 512
ESLT D+E I+E V GSFVRIRISSGDQKQDMYRLVQVVGTSKVAE Y+IGTRTTDIKLE
Sbjct: 456 ESLTDDSESIHEKVVGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEPYKIGTRTTDIKLE 515
Query: 513 ILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDL 572
ILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALT Q IRVNDL
Sbjct: 516 ILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTFQEIRVNDL 575
Query: 573 LEAEILRLNHLRDRANEKGHRKELKECVEKLQILNSPEERQRRLHEIPDVHADPNLDSLF 632
LEAE LRLN+LRDRA+EKGHRKELKECVEKLQ+LNSP ERQRRLHE+PDVH+DPNLDSL+
Sbjct: 576 LEAEKLRLNNLRDRASEKGHRKELKECVEKLQLLNSPVERQRRLHEVPDVHSDPNLDSLY 635
Query: 633 XXXXXXXXXXXXXXXGNARSKHPGSDRRERAPIFSKIWDGFLNNGGCRTPDLTATSDPIG 692
GN PIFS+IWDG LN G RT DLT SDPI
Sbjct: 636 ESDEDAGESDGNQQDGN-------------IPIFSRIWDGVLNGIGGRTRDLTTASDPIE 682
Query: 693 NICTLKNHTNPNDAAIDDXXXXXXXXXXXXXXXDISSPLPSIGTEQPFDDHLNDRFWHYQ 752
N C LK H NPN+ IDD DISSPL S G+ QPFDD +NDR WHYQ
Sbjct: 683 NTCLLKKHINPNETPIDDSADVVTKSEVSSVAVDISSPLISTGSAQPFDDFMNDRSWHYQ 742
Query: 753 DPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDKSILLTDALNRKSPENVPLTYN 812
DPSGKVQGPFSMLQLYKWNASGHFPPDL+VWR+DEKQ SILLTDALN K +NVPL N
Sbjct: 743 DPSGKVQGPFSMLQLYKWNASGHFPPDLKVWRVDEKQANSILLTDALNGKCSKNVPLRNN 802
Query: 813 SQSLSLGATVSLVDKESSQDGGRNATKNEISADSQIIEQSKEQKVDDTSTQSNGKDESVR 872
S LSLGA V+L DKESSQDGGRN+T NEISADS+IIEQ +EQKVDD STQSNGKDESVR
Sbjct: 803 SLLLSLGANVALDDKESSQDGGRNSTTNEISADSRIIEQIREQKVDDISTQSNGKDESVR 862
Query: 873 SNGWHDQXXXXXXXXXXXTTFTEKLNDNASDK-REDHGIEGNSEDNGNYGTNRTSDGQSN 931
SNGWHDQ T F+E LN+N ++K REDHGIE NSEDNGN+ +NRTS GQSN
Sbjct: 863 SNGWHDQ--SHVHPSIQPTAFSENLNENHTNKLREDHGIEKNSEDNGNHDSNRTSGGQSN 920
Query: 932 SGQSYQKRSDSEDNSGQTSGQNWRLPNINNSTNCLVTTSAHDPGTKTSPHKLGFDLHIPP 991
SGQ++QK+SDSEDNSGQ+S Q+WR N+N S+NCL TTSAH T+TSP KLGFDLH PP
Sbjct: 921 SGQNHQKQSDSEDNSGQSSAQSWRNHNVNTSSNCLDTTSAHVSETRTSPLKLGFDLHQPP 980
Query: 992 SPPVCN-TTWQAIIGEPDDFDESVSDLLAEVEAMESRGGLESPTSIMKRGEELTDGSKND 1050
S P CN TTWQAIIGEPDDFDESVSDLLAEVEAMES GGLESPTSIMKR EELTDGSKN
Sbjct: 981 SHPACNATTWQAIIGEPDDFDESVSDLLAEVEAMESLGGLESPTSIMKRSEELTDGSKNL 1040
Query: 1051 CLSFIELSPMLDAGKGDALSSTGNLHLPSQSTAAEESLXXXXXXXXXXXXXSGEHSPRSS 1110
CLSF ELSPMLDAGK DALSST +L L SQSTAAEE L S E S R+S
Sbjct: 1041 CLSFAELSPMLDAGKSDALSSTCDLQLLSQSTAAEEPL-QQADVNHHHQRISEELSSRNS 1099
Query: 1111 EVVVGMKNIGVSGNQWESGAGSSPIVPPTVTLGMAIDTTWRLGLENTHLGWGGMDQRETN 1170
+V VG KNI VS NQWESG+ +S I P T TLGM +DTTWRLGLE+THL WGGMDQR N
Sbjct: 1100 KVDVGSKNICVSTNQWESGSENSSIFPATATLGMTVDTTWRLGLESTHLEWGGMDQRNAN 1159
Query: 1171 TSWGVGQMEVHENRSTNSYTSVVAPGLGDGQTRYGSDRYSVPRDRSFPGPGRESGFGRVR 1230
TSWGVG V+ENRS+NS TSVV P GD QTRYGSDR+SVPRDR FPG GRE G R R
Sbjct: 1160 TSWGVGNTAVNENRSSNSCTSVVTPSFGDSQTRYGSDRFSVPRDRGFPGHGREPGLVRGR 1219
Query: 1231 TASNRQSLFGVGNGGSYRPSPKGQRVCKFYESGYCKKGASCGYLHP 1276
A NRQ LFGVGNG SYRP PKGQRVCKFYESGYC+KGASC Y HP
Sbjct: 1220 AAWNRQPLFGVGNGISYRPLPKGQRVCKFYESGYCRKGASCEYFHP 1265
>Medtr3g117490.1 | zinc finger CCCH domain protein | HC |
chr3:54988847-54999032 | 20130731
Length = 1386
Score = 623 bits (1607), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 425/596 (71%), Gaps = 31/596 (5%)
Query: 38 PAPAVADGVVLKRKRGRPAKGVSKTAXXXXXXKQPEDEEDVCFICFDGGSLVLCDRRGCP 97
P+P+ + G KRK G SK++ K+ E EDVCFICFDGG LVLCDRRGCP
Sbjct: 197 PSPSASAG---KRKSGNGKN--SKSSGRVPSKKKME--EDVCFICFDGGDLVLCDRRGCP 249
Query: 98 KAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYMCYTCTYSVCKGCIDDADFVFVR 157
KAYHP+CV RDEAFF +K KWNCGWH+CS+CEK +HY+CYTCT+S+CKGCI DA + VR
Sbjct: 250 KAYHPSCVNRDEAFFQTKGKWNCGWHLCSNCEKNAHYLCYTCTFSLCKGCIKDAVMLCVR 309
Query: 158 GNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWEYLFKVYWMYLKEKLSLTFDEIL 217
GNKG C CM+T+MLIE++ EGN + +VDF+DK+SWEYLFK Y++ LK KLSLTFDE+
Sbjct: 310 GNKGFCETCMRTVMLIEQNEEGN-NMAQVDFNDKNSWEYLFKDYYVDLKGKLSLTFDELA 368
Query: 218 RARNSCKVAAPMSSKLHTPHELYHLKDEKGSGSENSCIDLESNNLKNKRPKRQQKFLNKG 277
+A+N K + + SK +P EL+ +++GS S++ +++ + K ++PK++ K +K
Sbjct: 369 QAKNPWKGSGKLPSKEESPDELFDATNDRGSDSDSPYENVDLSRSKKRKPKKRAKSRSK- 427
Query: 278 DCVDRITSGSDTGVSLPEGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYVKKNNL 337
S + S E ++WASKELLEFV HM+NGD S+L QFDV LLLEY+K N L
Sbjct: 428 ------EGKSYSASSTEESSEWASKELLEFVMHMRNGDKSMLPQFDVHALLLEYIKINKL 481
Query: 338 RDPQQKSQIVCDFRLLKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAI-IDAAAN 396
RDP++KSQIVCD RL LFGK RVG+ EML LLE HFL+K++S A + G+ + + +
Sbjct: 482 RDPRRKSQIVCDARLQNLFGKPRVGHFEMLKLLESHFLLKEDSQAEDHQGSVVDTEVSHL 541
Query: 397 EGEATDDYNKQLMLVNDKKCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNLVESLT 456
EG+ DD ++ +K L Q+N D YAA+D HNINLIYLRRNLVE L
Sbjct: 542 EGDGDDDTYIKVGKDKKRKSRKKGDERGL--QSNIDEYAAIDNHNINLIYLRRNLVEDLL 599
Query: 457 IDTEKINENVAGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEHYQIGTRTTDIKLEILNL 516
DT++ +++V GSFVRIRIS QKQD+YRLVQV GT K AE Y++G + TDI LEILNL
Sbjct: 600 EDTDQFHDSVVGSFVRIRISGSGQKQDLYRLVQVAGTCKTAEPYKVGKKMTDILLEILNL 659
Query: 517 NRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAE 576
N+ E++S+D ISNQEF+EDECKRLRQSIK GL R+TVG+I +KALTLQA+RV D LE E
Sbjct: 660 NKTEIVSMDIISNQEFTEDECKRLRQSIKCGLINRMTVGDIQDKALTLQAVRVKDWLETE 719
Query: 577 ILRLNHLRDRANEKGHRKELKECVEKLQILNSPEERQRRLHEIPDVHADPNLDSLF 632
I+RL+HLRDRA +KLQ+L +PEERQRRL EIP++H DP +D +
Sbjct: 720 IVRLSHLRDRA-------------KKLQLLKTPEERQRRLEEIPEIHVDPKMDPSY 762
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 746 DRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDKSILLTDALNRK 802
++ WHYQDPSGKVQGPFSM+QL KWN +G+FP DLR+W+ E+QD+SILL D L K
Sbjct: 915 EKMWHYQDPSGKVQGPFSMVQLSKWNNTGYFPADLRIWKTSERQDESILLRDVLAGK 971
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 1173 WGV-GQMEVHENRSTNSYTSVVAPGL-GDGQTRYGSDRYSVPRDRSFPGPGRESGFGRVR 1230
W V GQ N + + S PG+ G+GQ+ G +R+ DR R GR
Sbjct: 1285 WAVPGQGPAPGNANPSWAASAGNPGMWGNGQSHSG-ERFHNQGDRGT----RGGDSGRGG 1339
Query: 1231 TASNRQSLFGVGNGGSYRPSPKGQR-VCKFYESGYCKKGASCGYLH 1275
+ NRQS F G+ G RP GQR +C++YESG C+KGASC Y H
Sbjct: 1340 KSWNRQSSFRSGSRGGSRPPSGGQRGICRYYESGNCRKGASCDYQH 1385
>Medtr5g021450.1 | GYF domain protein | HC | chr5:8294173-8289658 |
20130731
Length = 707
Score = 311 bits (798), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 172/224 (76%), Gaps = 8/224 (3%)
Query: 46 VVLKRKRGRPAKGVSKTAXXXXXXKQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACV 105
V + +KRGRP KG K+P+DEEDVCFICFDGGSLVLCD RGCPKAYHPACV
Sbjct: 43 VAVNKKRGRPPKGTVHAPVV----KKPKDEEDVCFICFDGGSLVLCDHRGCPKAYHPACV 98
Query: 106 KRDEAFFSSKAKWNCGWHICSSCEKASHYMCYTCTYSVCKGCI-DDADFVFVRGNKGLCG 164
KRDE FF KW CGWH+CS C K+ HYMCYTC YS+CKGC ++DFV VRGNKGLCG
Sbjct: 99 KRDEEFFRLAEKWKCGWHLCSDCGKSCHYMCYTCPYSLCKGCTKQESDFVSVRGNKGLCG 158
Query: 165 ICMKTIMLIEESAEGNKDKCEVDFDDKSSWEYLFKVYWMYLKEKLSLTFDEILRARNSCK 224
C++TIMLIE SA+G +CEVDFDD+SSWEYLFKVYW+YLK KLSL FDEILRA+N K
Sbjct: 159 ACLRTIMLIENSAQG--IECEVDFDDRSSWEYLFKVYWLYLKGKLSLNFDEILRAKNPWK 216
Query: 225 VAAPMSSKLHTPHELYHLKDEKGSGSENSCIDLESNNLKNKRPK 268
A +S K+ TP + +HLK + G GSENSCI ++SN+ NK+ K
Sbjct: 217 GAVRVSCKVQTPRKRHHLKVDNGCGSENSCI-VDSNSPINKKAK 259
Score = 260 bits (664), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 189/482 (39%), Positives = 244/482 (50%), Gaps = 95/482 (19%)
Query: 669 IWDGFLNNGGCRTPDLTATSDPIGNICTLKNHTNPNDAAIDDXXXXXXXXXXXX-XXXDI 727
+WD ++ G +L+ T + N CT+KN N N++AI+D DI
Sbjct: 262 VWDSVVDVVGRSAQELSTTCELNVNTCTIKNEMNTNESAINDGTDAGVSRLGDSGVAEDI 321
Query: 728 SSPLPSIGTEQPFDDHLNDRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDE 787
SS L S G EQP WHYQDP+GKV GPFSM L K + +F PDLRVWR+DE
Sbjct: 322 SSLLHSTGMEQPV--------WHYQDPTGKVHGPFSMSLLCKLKGTEYFSPDLRVWRVDE 373
Query: 788 KQDKSILLTDALNRKSPENVPLTYNSQSLSLGATVSLVDKESSQDGGRNATKNEISADSQ 847
KQ+ SILL+DAL+ K +NV L N + SLGA+V+L +KE+SQDG NAT++EI A++Q
Sbjct: 374 KQENSILLSDALSWKCSQNVSLPLNCEQQSLGASVTLENKENSQDGLGNATRSEICANNQ 433
Query: 848 IIEQSKEQKVDDTSTQSNGKDESVRSNGWHDQXXXXXXXXXX------------------ 889
I +QS E+KV DT T NG DESV+SNG +
Sbjct: 434 IFKQSDEEKVGDTCTPPNGTDESVKSNGGYTPSPGVTTQADGNISDGQSGYFERREESPK 493
Query: 890 ----------------XTTFTEKLNDNASDK-REDHGIEGNSEDNGNYGTNRTSDGQSNS 932
T F E LND SD+ E G + E NGN G+N +S+G SNS
Sbjct: 494 CEISCHGGPDVHLALPSTAFDENLNDKPSDEVVEGLGNDKKLEVNGNLGSNGSSEGPSNS 553
Query: 933 GQSYQKRSDSEDNSGQTSGQNWRLPNINNSTNCLVTTSAHDPGTKTSPHKLGFDLHIPPS 992
GQS QK+SD+E+N GQ+SGQNW +
Sbjct: 554 GQSDQKQSDNEENPGQSSGQNWMM------------------------------------ 577
Query: 993 PPVCNTTWQAIIGEPDDF--DESVSDLLAEVEAMESRGGLESPTSIMKRGEELTDGSKND 1050
A+ G DDF D+SVS+LL V A E + + P++ + TDG+ D
Sbjct: 578 --------AALFG--DDFLVDDSVSNLLDAV-AAEEKHSVTEPSAEEWDIDVFTDGAITD 626
Query: 1051 CLSFIELSPMLDAGKGDALSSTGNLHLPSQSTAAEESLXXXXXXXXXXXXXSGEHSPRSS 1110
CL I L P DAGKGDALSS+G+LHLPSQST A SGE S +++
Sbjct: 627 CLQGIIL-PDFDAGKGDALSSSGDLHLPSQSTVA-NGQPFQQADVHNQQTISGEQSSKTA 684
Query: 1111 EV 1112
EV
Sbjct: 685 EV 686
>Medtr5g021450.2 | GYF domain protein | HC | chr5:8294173-8289710 |
20130731
Length = 680
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 172/224 (76%), Gaps = 8/224 (3%)
Query: 46 VVLKRKRGRPAKGVSKTAXXXXXXKQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACV 105
V + +KRGRP KG K+P+DEEDVCFICFDGGSLVLCD RGCPKAYHPACV
Sbjct: 43 VAVNKKRGRPPKGTVHAPVV----KKPKDEEDVCFICFDGGSLVLCDHRGCPKAYHPACV 98
Query: 106 KRDEAFFSSKAKWNCGWHICSSCEKASHYMCYTCTYSVCKGCI-DDADFVFVRGNKGLCG 164
KRDE FF KW CGWH+CS C K+ HYMCYTC YS+CKGC ++DFV VRGNKGLCG
Sbjct: 99 KRDEEFFRLAEKWKCGWHLCSDCGKSCHYMCYTCPYSLCKGCTKQESDFVSVRGNKGLCG 158
Query: 165 ICMKTIMLIEESAEGNKDKCEVDFDDKSSWEYLFKVYWMYLKEKLSLTFDEILRARNSCK 224
C++TIMLIE SA+G +CEVDFDD+SSWEYLFKVYW+YLK KLSL FDEILRA+N K
Sbjct: 159 ACLRTIMLIENSAQGI--ECEVDFDDRSSWEYLFKVYWLYLKGKLSLNFDEILRAKNPWK 216
Query: 225 VAAPMSSKLHTPHELYHLKDEKGSGSENSCIDLESNNLKNKRPK 268
A +S K+ TP + +HLK + G GSENSCI ++SN+ NK+ K
Sbjct: 217 GAVRVSCKVQTPRKRHHLKVDNGCGSENSCI-VDSNSPINKKAK 259
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 219/424 (51%), Gaps = 94/424 (22%)
Query: 726 DISSPLPSIGTEQPFDDHLNDRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRI 785
DISS L S G EQP WHYQDP+GKV GPFSM L K + +F PDLRVWR+
Sbjct: 293 DISSLLHSTGMEQPV--------WHYQDPTGKVHGPFSMSLLCKLKGTEYFSPDLRVWRV 344
Query: 786 DEKQDKSILLTDALNRKSPENVPLTYNSQSLSLGATVSLVDKESSQDGGRNATKNEISAD 845
DEKQ+ SILL+DAL+ K +NV L N + SLGA+V+L +KE+SQDG NAT++EI A+
Sbjct: 345 DEKQENSILLSDALSWKCSQNVSLPLNCEQQSLGASVTLENKENSQDGLGNATRSEICAN 404
Query: 846 SQIIEQSKEQKVDDTSTQSNGKDESVRSNGWHDQXXXXXXXXXX---------------- 889
+QI +QS E+KV DT T NG DESV+SNG +
Sbjct: 405 NQIFKQSDEEKVGDTCTPPNGTDESVKSNGGYTPSPGVTTQADGNISDGQSGYFERREES 464
Query: 890 ------------------XTTFTEKLNDNASDK-REDHGIEGNSEDNGNYGTNRTSDGQS 930
T F E LND SD+ E G + E NGN G+N +S+G S
Sbjct: 465 PKCEISCHGGPDVHLALPSTAFDENLNDKPSDEVVEGLGNDKKLEVNGNLGSNGSSEGPS 524
Query: 931 NSGQSYQKRSDSEDNSGQTSGQNWRLPNINNSTNCLVTTSAHDPGTKTSPHKLGFDLHIP 990
NSGQS QK+SD+E+N GQ+SGQNW +
Sbjct: 525 NSGQSDQKQSDNEENPGQSSGQNWMM---------------------------------- 550
Query: 991 PSPPVCNTTWQAIIGEPDDF--DESVSDLLAEVEAMESRGGLESPTSIMKRGEELTDGSK 1048
A+ G DDF D+SVS+LL V A E + + P++ + TDG+
Sbjct: 551 ----------AALFG--DDFLVDDSVSNLLDAV-AAEEKHSVTEPSAEEWDIDVFTDGAI 597
Query: 1049 NDCLSFIELSPMLDAGKGDALSSTGNLHLPSQSTAAEESLXXXXXXXXXXXXXSGEHSPR 1108
DCL I L P DAGKGDALSS+G+LHLPSQST A SGE S +
Sbjct: 598 TDCLQGIIL-PDFDAGKGDALSSSGDLHLPSQSTVA-NGQPFQQADVHNQQTISGEQSSK 655
Query: 1109 SSEV 1112
++EV
Sbjct: 656 TAEV 659
>Medtr3g064260.1 | zinc finger CCCH domain protein | LC |
chr3:28905898-28897678 | 20130731
Length = 793
Score = 254 bits (648), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 271/560 (48%), Gaps = 31/560 (5%)
Query: 76 EDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYM 135
ED CF+C DGG + +CD C K YH CVK+D +F + +W C H C C S +M
Sbjct: 15 EDYCFVCKDGGEMRVCDFGDCLKTYHAECVKQDASFLKNDDRWCCASHSCYQCGGISKFM 74
Query: 136 CYTCTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWE 195
C CT + C C A+F V+GNKG C C K LIE++A+ + D +VD D + E
Sbjct: 75 CLCCTIAFCGKCFYGAEFALVKGNKGFCRHCSKLAFLIEKNADVDSDGEKVDMRDPDTIE 134
Query: 196 YLFKVYWMYLKEKLSLTFDEILRARNSCKVAAPMSSKLHTPHELYHLKDEKGSGSENSCI 255
F Y+ +K+K L ++ AR+ K +E+ +D+ G + I
Sbjct: 135 SYFFEYYQVIKKKEGLNSQDVYTARDIIKNG-------KNKYEVGEGEDDTGESDASDFI 187
Query: 256 DLESNNLKNKRPKRQQKFLNKGDCVDRITSGSDTGVSLPEGTKWASKELLEFVAHMKNGD 315
+ ++L + + + + I G + + W S+ L++F+ +
Sbjct: 188 GSDCDDLVGTSRVKSVRRKKCSEKLKSIIKGKVVKHTKKDFVGWGSRSLIDFLKSIGRDT 247
Query: 316 TSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRLLKLFGKARVGYIEMLVLLEPHFL 375
T L++ DV ++++Y N L DP++K ++CD +L L + V + LLE HF
Sbjct: 248 TEALSELDVAWIIIQYCHTNQLFDPKKKKIVICDAKLRNLLRRRSVNKNNIQNLLESHF- 306
Query: 376 VKDNSGAANTFGAAIIDAAANEGEATDDYNKQLMLVNDKKCITSKKADVLVPQNNPDAYA 435
DN T G + G + KQ L + T+K ++ + P +A
Sbjct: 307 -ADN--FEETDGIITSSEERDNGNGAFKFPKQGNLNS-----TTKPCQNILSEEQPSVFA 358
Query: 436 AVDPHNINLIYLRRNLVESLTIDTEKINENVAGSFVRIRISSGDQKQ-DMYRLVQVVGTS 494
A+ N+ L+YL+R+L+E L E + V GS+VR + D Q + + L+QV+G
Sbjct: 359 AIINSNMKLVYLKRSLIEELLKQPETFDGKVLGSYVRTKSDPNDYLQKNSHLLLQVIGIK 418
Query: 495 KVAEHYQIGTRTTDIKLEILNLNRKEV---ISIDEISNQEFSEDECKRLRQSIKYGLSKR 551
+ ++ DI EIL L V + I +IS+ +FSE+EC+ L Q + G+ K+
Sbjct: 419 R-------SSKQADINQEIL-LRLSYVPKDVPISQISDVDFSEEECQDLYQRMTNGMLKK 470
Query: 552 LTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDRANEKGHRKELKECVEKLQILNSPEE 611
TV E+ KA +L + E+ L H D ANEKG R+EL + +++ Q L SP E
Sbjct: 471 PTVLELEQKARSLHEDITKHWISREMALLQHRIDLANEKGRRRELGQYMDRKQKLGSPSE 530
Query: 612 RQRRLHEIPDV---HADPNL 628
+ R L EIP V D NL
Sbjct: 531 QLRLLSEIPKVIPEMVDTNL 550
>Medtr3g064250.1 | zinc finger CCCH domain protein | LC |
chr3:28895175-28887869 | 20130731
Length = 795
Score = 250 bits (639), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 282/574 (49%), Gaps = 59/574 (10%)
Query: 70 KQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCE 129
K+ E E CFIC DGG + +CD R C K YH C+ +D++F ++ W CG H C+ C
Sbjct: 9 KKEEIAESFCFICKDGGDMRICDFRNCLKTYHAECLGKDDSFLTNDDNWCCGSHYCNGCH 68
Query: 130 KASHYMCYTCTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFD 189
AS +MC C + C+ C A+F V+ N+G C C K LIE++ + + D +VD
Sbjct: 69 GASKFMCLCCPIAFCRKCFHGAEFALVKRNRGFCRHCSKLAYLIEKNVDVDSDGEKVDMK 128
Query: 190 DKSSWEYLFKVYWMYLKEK-------LSLTFDEILRARNSCKVAAPMSSKLHTPHELYHL 242
D + E F Y+ +K+K + D I+ +N C P+E+
Sbjct: 129 DPDTQESYFFDYYQIIKKKEGLNSQQVYFARDTIINRKNKC-----------DPYEIGEG 177
Query: 243 KDEKGSGSENSCI------DLESNNLKNKRPK----RQQKFLNKGDCVDRITSGSDTGVS 292
+D+ G ++ I ++ +K+ R K ++ K LN+ V++ G
Sbjct: 178 EDDTGESDVSNFIDSDYDDLDDTAGVKSVRRKKNCIKKLKLLNQK--VEKDKKKDFVG-- 233
Query: 293 LPEGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRL 352
W S+ L++F+ ++ T ++ DV +++ +Y KN L DP++K +++CD L
Sbjct: 234 ------WGSRSLVDFLKNIGEDTTKAFSEIDVASIISKYCHKNQLFDPKKKKKVICDANL 287
Query: 353 LKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAIIDAAANEGEATDDYNKQLMLVN 412
L + V + LL HF+ DN T G + G + KQ L +
Sbjct: 288 ETLLRRKSVNKNNIQKLLASHFV--DN--FEETDGIISSSEERDNGNEAFKFPKQRNLNS 343
Query: 413 DKKCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNLVESLTIDTEKINENVAGSFVR 472
T+K L+ Q P +AA+ NI L+YLRR L++ L E + V GSFVR
Sbjct: 344 -----TTKPCQNLLSQEQPSGFAAIINSNIKLVYLRRTLIDELLKKPETFDVKVLGSFVR 398
Query: 473 IRISSGDQKQ-DMYRLVQVVG---TSKVAEHYQIGTRTTDIKLEILNLNRKEVISIDEIS 528
I+ D Q + + LVQV+G +SK E YQ +I+L + + E + I +IS
Sbjct: 399 IKSDRNDYLQKNSHLLVQVIGIKRSSKKEEIYQ------EIQLRLSYV--AEDVPISKIS 450
Query: 529 NQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDRAN 588
+ +FSE+EC+ L + + GL K+ T+ E+ KA TL + + E L + DRAN
Sbjct: 451 DDDFSEEECQDLYRRMTNGLLKKPTIMELEQKARTLHEDMIKHWISRERELLRNRIDRAN 510
Query: 589 EKGHRKELKECVEKLQILNSPEERQRRLHEIPDV 622
EKG R+E +++ Q L SP E+ L+EIP V
Sbjct: 511 EKGWRREYPFYMDQKQKLESPSEQSHLLNEIPKV 544
>Medtr3g064270.1 | zinc finger CCCH domain protein | LC |
chr3:28918653-28912043 | 20130731
Length = 789
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 267/555 (48%), Gaps = 36/555 (6%)
Query: 76 EDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYM 135
E CF C DGG + +CD R C KAYH CVK+D +F ++ +W CG H C C +AS +
Sbjct: 15 EGCCFSCKDGGQMRVCDSRDCFKAYHAECVKQDASFLTNDNRWCCGSHFCYLCGRASKFR 74
Query: 136 CYTCTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWE 195
C+ C +VC C DA+F V+ KG C C K LIE +A+ + D ++D D + E
Sbjct: 75 CFCCPIAVCGKCFYDAEFATVKTTKGFCRHCSKLAFLIETNADIDSDGEKIDMRDPDTVE 134
Query: 196 YLFKVYWMYLKEKLSLTFDEILRARNSCKVAAPMSSKLHTPHELYHLKDEKGSGSENSCI 255
F Y+ +K+K ++ AR+ K + L P+E +D G + I
Sbjct: 135 SYFLEYYQVIKKKEGWNSQDVYIARDIIK-NGNIKRDLE-PYERGEGED-TGESDASDFI 191
Query: 256 DLESNNLKN-------KRPKRQQKFLNKGDCVDRITSGSDTGVSLPEGTKWASKELLEFV 308
+S++L KR K + K +N G T + W S+ L++F+
Sbjct: 192 GSDSDDLVGTSRVKPVKRKKNKVKSIN----------GKVTKDKKKDFVGWGSRSLIDFL 241
Query: 309 AHMKNGDTSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRLLKLFGKARVGYIEMLV 368
++ T ++ DV +++ +Y +KN L DP++K ++CD L+ L + + +
Sbjct: 242 KNIGEDTTKAFSEIDVASIIHKYCQKNQLFDPKKKKMVICDANLITLLRQRTINKNNIQK 301
Query: 369 LLEPHFLVKDNSGAANTFGAAIIDAAANEGEATDDYNKQLMLVNDKKCITSKKADVLVPQ 428
LL HF A+ F D+ + E DD + T K + +
Sbjct: 302 LLASHF--------ADNFEET--DSNISSSEERDDNEAFKFRKHRNLNSTIKSCQNVRSK 351
Query: 429 NNPDAYAAVDPHNINLIYLRRNLVESLTIDTEKINENVAGSFVRIRISSGDQKQ-DMYRL 487
P +A + NI L+YL+R+L+E L + V GS+VR + D Q + + L
Sbjct: 352 ELPSGFAGIISSNIKLVYLKRSLIEELLKQPDTFAGKVLGSYVRTKSDPNDYLQKNSHLL 411
Query: 488 VQVVGTSKVAEHYQIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYG 547
++V G + + +I +I L + N+ + +SI +IS+ +FSE+EC+ L Q + G
Sbjct: 412 LEVTGIRRSSNQDEIN---QEILLRLSNVPKD--VSISQISDVDFSEEECQDLYQRMTNG 466
Query: 548 LSKRLTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDRANEKGHRKELKECVEKLQILN 607
K+ T+ E+ KA TL + EI L + DRANEKG R+E +++ Q L
Sbjct: 467 QLKKPTLLELEQKARTLHEDITKHWISREIELLRNRIDRANEKGWRREYPFYMDQKQKLE 526
Query: 608 SPEERQRRLHEIPDV 622
S E+ R L EIP V
Sbjct: 527 SASEQSRLLSEIPKV 541
>Medtr3g064280.1 | zinc finger CCCH domain protein | LC |
chr3:28928317-28921679 | 20130731
Length = 787
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 269/553 (48%), Gaps = 29/553 (5%)
Query: 76 EDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYM 135
E+ CF+C DGG L +CD R C K YH C+ D +F + W CG H C C +AS +M
Sbjct: 15 EEWCFVCKDGGELRVCDFRDCLKTYHAKCLGHDASFMENDNNWCCGSHYCYLCGRASKFM 74
Query: 136 CYTCTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWE 195
C C +VC C DA+F V+ NKG C C K LIE +A+ + D ++D D + E
Sbjct: 75 CLCCPIAVCGRCFYDAEFATVKRNKGFCRHCSKLAFLIETNADVDSDGEKIDMRDPDTVE 134
Query: 196 YLFKVYWMYLKEKLSLTFDEILRARNSCKVAAPMSSKLHTPHELYHLKDEKGSGSENSCI 255
F Y+ +KE+ L +I AR+ K + + P+E+ +D+ G ++ I
Sbjct: 135 SYFLEYYQVIKEREGLNSQDIYIARDIVKNGK--NKRDLDPYEIGEGEDDTGDSDVSNFI 192
Query: 256 DLESNNLKNKRPKRQQKFLNKGDCVDRITSGSDTGVSLPEGTKWASKELLEFVAHMKNGD 315
+ ++ + K + I + W S+ L++F+ ++
Sbjct: 193 GSDCDDFDETSRVKSVKRKKCTKKLKSIKGKV-AKDKKKDFVGWGSRSLIDFLKNIGRDT 251
Query: 316 TSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRLLKLFGKAR-VGYIEMLVLLEPHF 374
T ++ +V +++ +Y K+ L DP++K +I+CD L L + + V + LL HF
Sbjct: 252 TKAFSEIEVASIVNDYCHKHQLFDPKKK-KIICDANLKTLLRRRKTVKKNNIQKLLASHF 310
Query: 375 LVKDNSGAANTFGAAIIDAAANEGEATDDYNKQLMLVNDKKCITSKKADVLVPQNNPDAY 434
+ DN ++ D A + + N + K C + ++ P +
Sbjct: 311 V--DNFEETDSSSEERDDNEAFKFRKHRNLNSTI-----KSCQNVRSKEL------PSGF 357
Query: 435 AAVDPHNINLIYLRRNLVESLTIDTEKINENVAGSFVRIRISSGDQKQ-DMYRLVQVVGT 493
AA+ NI L+YL+R+L+E L E + V GS+VRI+ D Q + + LVQV G
Sbjct: 358 AAIVSSNIKLVYLKRSLIEELLKQPE-TDGKVLGSYVRIKSDPNDYLQKNSHLLVQVKGI 416
Query: 494 SKVAEHYQIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLT 553
++ ++ I + +I L + N+ + + I +IS+ +FSE+EC+ L Q + GL ++ T
Sbjct: 417 NRSSKQDDI---SQEILLRLSNVPKD--VPISQISDVDFSEEECQDLYQRMTNGLPQKPT 471
Query: 554 VGEILNKALTLQAIRVNDLLEAEILRLNHLRDRANEKGHRKELKECV----EKLQILNSP 609
+ E+ KA TL + EI L + DRANEKG R+E + ++ Q L S
Sbjct: 472 ILELEKKARTLHEDITKHWISREIELLRNRIDRANEKGWRREYPFMIYLYMDQKQKLESA 531
Query: 610 EERQRRLHEIPDV 622
E+ R L EIP V
Sbjct: 532 AEQSRLLSEIPKV 544
>Medtr3g064300.1 | zinc ion-binding/DNA-binding protein, putative |
LC | chr3:28939249-28935080 | 20130731
Length = 279
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 70/126 (55%)
Query: 70 KQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCE 129
++ E ED CF C DGG L +CD R C K YH CV +D++F + W CG H C C
Sbjct: 9 RKEEISEDYCFFCKDGGELRVCDFRNCLKTYHANCVGQDDSFLKNDDYWCCGSHYCYICR 68
Query: 130 KASHYMCYTCTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFD 189
+ +MC C +VC C A F V+ NKG CG C K LIEE+AE + D ++D
Sbjct: 69 RKPKFMCLCCPKAVCGNCYQGAVFANVKRNKGFCGHCSKLAFLIEENAEVDSDGEKIDMK 128
Query: 190 DKSSWE 195
D ++E
Sbjct: 129 DPDTFE 134
>Medtr6g065790.1 | GYF domain protein | LC | chr6:24383562-24380716
| 20130731
Length = 515
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 732 PSIGTEQPFDDHLNDRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDK 791
PS T P ++ + W+Y DP G VQGPF + L WN S +F PD +VW+ + QD+
Sbjct: 438 PSFITPVPVENP-HSSTWNYIDPQGNVQGPFPLFSLKCWNDSRYFSPDFKVWKAGQTQDQ 496
Query: 792 SILLTDALNRKSP 804
S+LL D L++ P
Sbjct: 497 SVLLVDILSKYFP 509
>Medtr6g065790.2 | GYF domain protein | LC | chr6:24383562-24380716
| 20130731
Length = 411
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 732 PSIGTEQPFDDHLNDRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDK 791
PS T P ++ + W+Y DP G VQGPF + L WN S +F PD +VW+ + QD+
Sbjct: 334 PSFITPVPVENP-HSSTWNYIDPQGNVQGPFPLFSLKCWNDSRYFSPDFKVWKAGQTQDQ 392
Query: 792 SILLTDALNRKSP 804
S+LL D L++ P
Sbjct: 393 SVLLVDILSKYFP 405
>Medtr7g088260.1 | cyclin-like F-box protein | LC |
chr7:34357570-34355232 | 20130731
Length = 462
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 70 KQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCG 121
++ E ED C +CFDG LCDR GCP YHP+CVKR++ +K N G
Sbjct: 37 RRSESYED-CIVCFDGDDFELCDRMGCPNPYHPSCVKREKVLVQAKENLNSG 87