Miyakogusa Predicted Gene

Lj0g3v0126949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126949.1 Non Characterized Hit- tr|I1M638|I1M638_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.19,0,NIEMANN-PICK C1,NULL; PATCHED-RELATED,NULL;
seg,NULL,CUFF.7666.1
         (582 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g099070.1 | niemann-pick C1-like protein | HC | chr5:43436...   827   0.0  
Medtr3g115450.3 | niemann-pick C1-like protein | HC | chr3:54006...   706   0.0  
Medtr3g115450.4 | niemann-pick C1-like protein | HC | chr3:54006...   706   0.0  
Medtr3g115450.2 | niemann-pick C1-like protein | HC | chr3:54006...   706   0.0  
Medtr3g115450.1 | niemann-pick C1-like protein | HC | chr3:54007...   705   0.0  

>Medtr5g099070.1 | niemann-pick C1-like protein | HC |
           chr5:43436947-43416142 | 20130731
          Length = 1340

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/558 (76%), Positives = 468/558 (83%), Gaps = 7/558 (1%)

Query: 31  QISRSIHSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCT 90
           QI  + HS EYC+MYDICGQR+DGKVLNCPYPSPSVKP+DLLSAKIQSLCP++ GNVCCT
Sbjct: 55  QIMSNTHSEEYCSMYDICGQRTDGKVLNCPYPSPSVKPNDLLSAKIQSLCPSLNGNVCCT 114

Query: 91  EEQFDTLRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVD 150
           E+QF+TLR QVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTS+S V+GN+TVD
Sbjct: 115 EQQFETLRAQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSVSLVNGNITVD 174

Query: 151 GIDLYVTETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSP 210
            ID Y TETFG+GLY ACKDVKFGTMNTRAIDFVG GA+NY+EWF+FLGQKVP GFPGSP
Sbjct: 175 AIDFYATETFGDGLYQACKDVKFGTMNTRAIDFVGGGASNYQEWFSFLGQKVPLGFPGSP 234

Query: 211 YSIDFKTTILDSSPMELMNASVYSCNDTSLGXXXXXXXXXXXXXXXXXXXXXXXXXXIKM 270
           YSI FKTTI DSSPM+ MNA VYSCNDTSLG                          I+M
Sbjct: 235 YSIHFKTTIPDSSPMKPMNAPVYSCNDTSLGCSCGDCPSSPVCSGSEPSPPTKDPCSIRM 294

Query: 271 GSLKVRCVDLSLAVLYIVLVFVLFGWIXXXXXXXXXXXGSSAEPLLVS---EGRSFTNLP 327
           GSLKVRCVD SLA+LY++LVFVL GW+           GS  EPLL     EG SFTN+ 
Sbjct: 295 GSLKVRCVDFSLALLYVLLVFVLLGWVLLQRTRQERRVGSDVEPLLNDMGDEGSSFTNIQ 354

Query: 328 KDG----EVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCF 383
           +D     E  V+DPQRQ  +Q+SF+Q +LS FYR+YGRWAA RP  VLC SL IV+LLC 
Sbjct: 355 RDETHPEEEQVMDPQRQKAMQFSFVQGYLSRFYRSYGRWAAMRPNTVLCLSLVIVLLLCL 414

Query: 384 GLLRFNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVT 443
           GLLRF VETRPEKLW GP SKAAEEK++FDSHLAPFYRIEQLIIAT+P+SEHGKPPSI+T
Sbjct: 415 GLLRFEVETRPEKLWTGPGSKAAEEKDYFDSHLAPFYRIEQLIIATIPDSEHGKPPSIIT 474

Query: 444 DDNIELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYG 503
           +DNIELLFEIQEKVD IRANYSGL VSLSDICLKPLG+DCATQSILQYFQMD DN+D+YG
Sbjct: 475 EDNIELLFEIQEKVDGIRANYSGLFVSLSDICLKPLGDDCATQSILQYFQMDSDNYDDYG 534

Query: 504 GVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVG 563
           GVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNAL K G
Sbjct: 535 GVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALAKFG 594

Query: 564 DENGKAIAWEKAFIQLAK 581
           DENGKAIAWEKAFIQLAK
Sbjct: 595 DENGKAIAWEKAFIQLAK 612


>Medtr3g115450.3 | niemann-pick C1-like protein | HC |
           chr3:54006798-53989443 | 20130731
          Length = 1284

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/554 (61%), Positives = 414/554 (74%), Gaps = 10/554 (1%)

Query: 37  HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDT 96
           HS EYCAMYDICG+RSDGKV+NCP+ SP+VKP DLLS+KIQSLCPTITGNVCCT  QFDT
Sbjct: 39  HSVEYCAMYDICGKRSDGKVINCPFGSPAVKPDDLLSSKIQSLCPTITGNVCCTGAQFDT 98

Query: 97  LRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 156
           LR QVQQA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVT++ +V GN+TV  ID +V
Sbjct: 99  LRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTTVDKVGGNLTVGSIDYFV 158

Query: 157 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 216
           ++ FGEGLY++CKDVKFGT N+  + F+G GA N KEWFAF+G+K  PG  GSPY+I F 
Sbjct: 159 SDAFGEGLYNSCKDVKFGTANSLVMQFIGGGAQNVKEWFAFIGKKAAPGGFGSPYAIMFP 218

Query: 217 TTILDSSPMELMNASVYSCNDTSLGXXXXXX-XXXXXXXXXXXXXXXXXXXXIKMGSLKV 275
                SS ME MN S YSC D SLG                           +K+G+L V
Sbjct: 219 PNATKSSGMEPMNVSAYSCGDISLGCSCGDCPSSSVCSSSSSTTTQKRDSCSLKIGTLMV 278

Query: 276 RCVDLSLAVLYIVLVFVLFGW-IXXXXXXXXXXXGSSAEPLLVSEGRSFT-------NLP 327
           +CVDL+L VLYI+L+ V  GW +            + +   ++S G+  +       NLP
Sbjct: 279 KCVDLTLTVLYIILLSVFLGWGLYYRTRERKPAYRTKSVSNVISGGQLHSRNQEKDENLP 338

Query: 328 KDGEVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLR 387
              +++    Q +NEV+ S +Q ++SNFYR YG + AR P +VL SSLAIVILLC GL+R
Sbjct: 339 MH-QIIEDVSQNRNEVRLSAVQGYMSNFYRKYGLYVARNPIMVLASSLAIVILLCLGLIR 397

Query: 388 FNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNI 447
           F VETRPEKLWVGP SKAAEEK+FFDSHLAPFYRIEQLI+ T+P+  +   P IV++DNI
Sbjct: 398 FKVETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLILGTVPDHVNSTSPRIVSEDNI 457

Query: 448 ELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEH 507
           + LFE+Q+KVD IRAN+SGL+VSL DICLKPL ++CATQSILQYF+MDP+NFDNYGGVEH
Sbjct: 458 KFLFEVQKKVDAIRANHSGLMVSLQDICLKPLDKECATQSILQYFKMDPNNFDNYGGVEH 517

Query: 508 AEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENG 567
             YCF+HY+S + C SAFK PL+P+T LGGFSGN+YS ASAFI+TYPVNNA+ + G+EN 
Sbjct: 518 LTYCFEHYSSADQCMSAFKGPLDPSTVLGGFSGNDYSGASAFIVTYPVNNAIDEEGNENA 577

Query: 568 KAIAWEKAFIQLAK 581
           KA+AWEK FIQL K
Sbjct: 578 KAVAWEKTFIQLVK 591


>Medtr3g115450.4 | niemann-pick C1-like protein | HC |
           chr3:54006798-53989923 | 20130731
          Length = 1284

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/554 (61%), Positives = 414/554 (74%), Gaps = 10/554 (1%)

Query: 37  HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDT 96
           HS EYCAMYDICG+RSDGKV+NCP+ SP+VKP DLLS+KIQSLCPTITGNVCCT  QFDT
Sbjct: 39  HSVEYCAMYDICGKRSDGKVINCPFGSPAVKPDDLLSSKIQSLCPTITGNVCCTGAQFDT 98

Query: 97  LRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 156
           LR QVQQA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVT++ +V GN+TV  ID +V
Sbjct: 99  LRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTTVDKVGGNLTVGSIDYFV 158

Query: 157 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 216
           ++ FGEGLY++CKDVKFGT N+  + F+G GA N KEWFAF+G+K  PG  GSPY+I F 
Sbjct: 159 SDAFGEGLYNSCKDVKFGTANSLVMQFIGGGAQNVKEWFAFIGKKAAPGGFGSPYAIMFP 218

Query: 217 TTILDSSPMELMNASVYSCNDTSLGXXXXXX-XXXXXXXXXXXXXXXXXXXXIKMGSLKV 275
                SS ME MN S YSC D SLG                           +K+G+L V
Sbjct: 219 PNATKSSGMEPMNVSAYSCGDISLGCSCGDCPSSSVCSSSSSTTTQKRDSCSLKIGTLMV 278

Query: 276 RCVDLSLAVLYIVLVFVLFGW-IXXXXXXXXXXXGSSAEPLLVSEGRSFT-------NLP 327
           +CVDL+L VLYI+L+ V  GW +            + +   ++S G+  +       NLP
Sbjct: 279 KCVDLTLTVLYIILLSVFLGWGLYYRTRERKPAYRTKSVSNVISGGQLHSRNQEKDENLP 338

Query: 328 KDGEVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLR 387
              +++    Q +NEV+ S +Q ++SNFYR YG + AR P +VL SSLAIVILLC GL+R
Sbjct: 339 MH-QIIEDVSQNRNEVRLSAVQGYMSNFYRKYGLYVARNPIMVLASSLAIVILLCLGLIR 397

Query: 388 FNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNI 447
           F VETRPEKLWVGP SKAAEEK+FFDSHLAPFYRIEQLI+ T+P+  +   P IV++DNI
Sbjct: 398 FKVETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLILGTVPDHVNSTSPRIVSEDNI 457

Query: 448 ELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEH 507
           + LFE+Q+KVD IRAN+SGL+VSL DICLKPL ++CATQSILQYF+MDP+NFDNYGGVEH
Sbjct: 458 KFLFEVQKKVDAIRANHSGLMVSLQDICLKPLDKECATQSILQYFKMDPNNFDNYGGVEH 517

Query: 508 AEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENG 567
             YCF+HY+S + C SAFK PL+P+T LGGFSGN+YS ASAFI+TYPVNNA+ + G+EN 
Sbjct: 518 LTYCFEHYSSADQCMSAFKGPLDPSTVLGGFSGNDYSGASAFIVTYPVNNAIDEEGNENA 577

Query: 568 KAIAWEKAFIQLAK 581
           KA+AWEK FIQL K
Sbjct: 578 KAVAWEKTFIQLVK 591


>Medtr3g115450.2 | niemann-pick C1-like protein | HC |
           chr3:54006806-53989459 | 20130731
          Length = 1284

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/554 (61%), Positives = 414/554 (74%), Gaps = 10/554 (1%)

Query: 37  HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDT 96
           HS EYCAMYDICG+RSDGKV+NCP+ SP+VKP DLLS+KIQSLCPTITGNVCCT  QFDT
Sbjct: 39  HSVEYCAMYDICGKRSDGKVINCPFGSPAVKPDDLLSSKIQSLCPTITGNVCCTGAQFDT 98

Query: 97  LRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 156
           LR QVQQA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVT++ +V GN+TV  ID +V
Sbjct: 99  LRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTTVDKVGGNLTVGSIDYFV 158

Query: 157 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 216
           ++ FGEGLY++CKDVKFGT N+  + F+G GA N KEWFAF+G+K  PG  GSPY+I F 
Sbjct: 159 SDAFGEGLYNSCKDVKFGTANSLVMQFIGGGAQNVKEWFAFIGKKAAPGGFGSPYAIMFP 218

Query: 217 TTILDSSPMELMNASVYSCNDTSLGXXXXXX-XXXXXXXXXXXXXXXXXXXXIKMGSLKV 275
                SS ME MN S YSC D SLG                           +K+G+L V
Sbjct: 219 PNATKSSGMEPMNVSAYSCGDISLGCSCGDCPSSSVCSSSSSTTTQKRDSCSLKIGTLMV 278

Query: 276 RCVDLSLAVLYIVLVFVLFGW-IXXXXXXXXXXXGSSAEPLLVSEGRSFT-------NLP 327
           +CVDL+L VLYI+L+ V  GW +            + +   ++S G+  +       NLP
Sbjct: 279 KCVDLTLTVLYIILLSVFLGWGLYYRTRERKPAYRTKSVSNVISGGQLHSRNQEKDENLP 338

Query: 328 KDGEVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLR 387
              +++    Q +NEV+ S +Q ++SNFYR YG + AR P +VL SSLAIVILLC GL+R
Sbjct: 339 MH-QIIEDVSQNRNEVRLSAVQGYMSNFYRKYGLYVARNPIMVLASSLAIVILLCLGLIR 397

Query: 388 FNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNI 447
           F VETRPEKLWVGP SKAAEEK+FFDSHLAPFYRIEQLI+ T+P+  +   P IV++DNI
Sbjct: 398 FKVETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLILGTVPDHVNSTSPRIVSEDNI 457

Query: 448 ELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEH 507
           + LFE+Q+KVD IRAN+SGL+VSL DICLKPL ++CATQSILQYF+MDP+NFDNYGGVEH
Sbjct: 458 KFLFEVQKKVDAIRANHSGLMVSLQDICLKPLDKECATQSILQYFKMDPNNFDNYGGVEH 517

Query: 508 AEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENG 567
             YCF+HY+S + C SAFK PL+P+T LGGFSGN+YS ASAFI+TYPVNNA+ + G+EN 
Sbjct: 518 LTYCFEHYSSADQCMSAFKGPLDPSTVLGGFSGNDYSGASAFIVTYPVNNAIDEEGNENA 577

Query: 568 KAIAWEKAFIQLAK 581
           KA+AWEK FIQL K
Sbjct: 578 KAVAWEKTFIQLVK 591


>Medtr3g115450.1 | niemann-pick C1-like protein | HC |
           chr3:54007010-53991920 | 20130731
          Length = 1362

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/554 (61%), Positives = 414/554 (74%), Gaps = 10/554 (1%)

Query: 37  HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDT 96
           HS EYCAMYDICG+RSDGKV+NCP+ SP+VKP DLLS+KIQSLCPTITGNVCCT  QFDT
Sbjct: 43  HSVEYCAMYDICGKRSDGKVINCPFGSPAVKPDDLLSSKIQSLCPTITGNVCCTGAQFDT 102

Query: 97  LRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 156
           LR QVQQA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVT++ +V GN+TV  ID +V
Sbjct: 103 LRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTTVDKVGGNLTVGSIDYFV 162

Query: 157 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 216
           ++ FGEGLY++CKDVKFGT N+  + F+G GA N KEWFAF+G+K  PG  GSPY+I F 
Sbjct: 163 SDAFGEGLYNSCKDVKFGTANSLVMQFIGGGAQNVKEWFAFIGKKAAPGGFGSPYAIMFP 222

Query: 217 TTILDSSPMELMNASVYSCNDTSLGXXXXXX-XXXXXXXXXXXXXXXXXXXXIKMGSLKV 275
                SS ME MN S YSC D SLG                           +K+G+L V
Sbjct: 223 PNATKSSGMEPMNVSAYSCGDISLGCSCGDCPSSSVCSSSSSTTTQKRDSCSLKIGTLMV 282

Query: 276 RCVDLSLAVLYIVLVFVLFGW-IXXXXXXXXXXXGSSAEPLLVSEGRSFT-------NLP 327
           +CVDL+L VLYI+L+ V  GW +            + +   ++S G+  +       NLP
Sbjct: 283 KCVDLTLTVLYIILLSVFLGWGLYYRTRERKPAYRTKSVSNVISGGQLHSRNQEKDENLP 342

Query: 328 KDGEVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLR 387
              +++    Q +NEV+ S +Q ++SNFYR YG + AR P +VL SSLAIVILLC GL+R
Sbjct: 343 MH-QIIEDVSQNRNEVRLSAVQGYMSNFYRKYGLYVARNPIMVLASSLAIVILLCLGLIR 401

Query: 388 FNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNI 447
           F VETRPEKLWVGP SKAAEEK+FFDSHLAPFYRIEQLI+ T+P+  +   P IV++DNI
Sbjct: 402 FKVETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLILGTVPDHVNSTSPRIVSEDNI 461

Query: 448 ELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEH 507
           + LFE+Q+KVD IRAN+SGL+VSL DICLKPL ++CATQSILQYF+MDP+NFDNYGGVEH
Sbjct: 462 KFLFEVQKKVDAIRANHSGLMVSLQDICLKPLDKECATQSILQYFKMDPNNFDNYGGVEH 521

Query: 508 AEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENG 567
             YCF+HY+S + C SAFK PL+P+T LGGFSGN+YS ASAFI+TYPVNNA+ + G+EN 
Sbjct: 522 LTYCFEHYSSADQCMSAFKGPLDPSTVLGGFSGNDYSGASAFIVTYPVNNAIDEEGNENA 581

Query: 568 KAIAWEKAFIQLAK 581
           KA+AWEK FIQL K
Sbjct: 582 KAVAWEKTFIQLVK 595