Miyakogusa Predicted Gene

Lj0g3v0126739.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126739.2 tr|B9IBW3|B9IBW3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_774201 PE=4
SV=1,56.84,0,seg,NULL; Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; NTP_transf_2,Nucleoti,CUFF.7657.2
         (1510 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g027425.1 | nucleotidyltransferase family protein | HC | c...  2033   0.0  
Medtr2g079330.1 | nucleotidyltransferase family protein | HC | c...    62   5e-09
Medtr2g079330.3 | nucleotidyltransferase family protein | HC | c...    60   1e-08

>Medtr4g027425.1 | nucleotidyltransferase family protein | HC |
            chr4:9491496-9506334 | 20130731
          Length = 1573

 Score = 2033 bits (5268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1038/1549 (67%), Positives = 1142/1549 (73%), Gaps = 86/1549 (5%)

Query: 1    MAHRQLMDSLTSHISLYHSQSXXXXXXXXXXXXXRTSILKWFSSLSLHQRLAHLTIVDSS 60
            MAHRQL+DSLTSHISLYHS S             R+SILKWFSSLS+H RL++LTI+D +
Sbjct: 1    MAHRQLIDSLTSHISLYHSHSPNPNPNPNP----RSSILKWFSSLSIHHRLSYLTILDHN 56

Query: 61   FVQILLQMIANLRGNGHGCFILLPDLPSRDPPFLPTLCFKKSRGLLSRVADSDAAARWIF 120
            F+ ILLQM+  L+ N H  FILL DLPSRDPPFLPTLCFKKS GLLSR+AD D A ++I 
Sbjct: 57   FILILLQMLNKLQSNRHTSFILLADLPSRDPPFLPTLCFKKSHGLLSRIADKDTACQFIS 116

Query: 121  ESARLFESREGEEVAA---------------------------CL--------CSPRRLD 145
            ES RLF+SREGE  ++                           CL        CS + LD
Sbjct: 117  ESVRLFDSREGENSSSSPSHATCSMKCLDGKNSKKSQATCSMKCLDGENSRATCSTKCLD 176

Query: 146  AVALAEGLVEDVDRFVEAMDRISNXXXXXXXXXXXXADWVELNWLKSKGYYGVEAFLANR 205
            A+   E  VE+VDRFVE MD IS              DWVELNWLKSKGYY +EAF+ NR
Sbjct: 177  AMTFTEKFVENVDRFVEVMDEISGGGFLRGEESEIGEDWVELNWLKSKGYYRIEAFIVNR 236

Query: 206  IEVCMRLAWLNSSGGRKRGVKLKEKLNAAGISANVYWRKKGCVDWWANLDAVTRKKVFTT 265
            +EV MRL W+NS GG++RGVKLKEK+N AG++ANVYWRKKGCVDWW NLD+V RKKVF T
Sbjct: 237  VEVSMRLGWMNSCGGKRRGVKLKEKMNLAGVAANVYWRKKGCVDWWRNLDSVMRKKVFDT 296

Query: 266  IIMKAAKSLTSEVLEVAGSASKDEIWLHS--TGAEKLLDYYRPASAQRTIPTFPDDTELG 323
            I+MK+AK+LT EVL++A SASKD +WL++   G +KLLDY   AS+QRTI  F DDTE G
Sbjct: 297  ILMKSAKALTYEVLKMASSASKDAVWLYNRGEGVDKLLDYNCTASSQRTIRAFRDDTEFG 356

Query: 324  TVITPVTFCTKPAAIARAFNSLFVLLDVKMMLTSTSSHNSEYDIGKLFFSSLGSVCTISD 383
             +ITPV+   KPAA++RA +SL VL D+ ++LTS  S NSEYD+  LFFSSLGSV TISD
Sbjct: 357  RIITPVSLRKKPAALSRALHSLSVLQDISILLTS--SLNSEYDVETLFFSSLGSVSTISD 414

Query: 384  CILRKMRGFLMVISLDCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPVP 443
            CILRK+RGFLMVISLDCT                                     QNP  
Sbjct: 415  CILRKLRGFLMVISLDCTKHELLEEFDKPSSGKPKEKLGLSNRKKKGRTRNTKK-QNPAQ 473

Query: 444  KTSLGDISRENPLKDIDCTMDNKMKSDLMGSRELPDVSLGKEISMGNSSSTVKM-DGTRE 502
            K+S+  +S EN  KDIDC +DN+ K+D+   RELPDV L K+IS   SSSTVK+ D TRE
Sbjct: 474  KSSVNGVSHENIHKDIDCIVDNEKKTDIAKPRELPDVPLVKDISTEGSSSTVKIVDNTRE 533

Query: 503  LDFGKPRTTPXXXXXXXXXXXXTAVDCTVGDSKKSIMHATSSTIIAEGEVAIRGRSFDSC 562
            L+ GKPRTTP            T VD  V DS KSI H  S+T I++ EVAI   SFDS 
Sbjct: 534  LNVGKPRTTPRKRRKEKNKNKSTPVDSAVVDSHKSITHVASTTAISKVEVAICDSSFDSS 593

Query: 563  TIPNVKNDNSIGNDILAXXXXXXXXXXGLARENNSTXXXXXXXXXXXXXXXXXXXPQCCS 622
            TI NVKND+SIGNDILA          GL +EN+ST                   PQCC 
Sbjct: 594  TIQNVKNDDSIGNDILASNSSLCCSLNGLTKENSSTRSVEEENVGGLAESCNSSGPQCCL 653

Query: 623  LSNERKKNSSGLDTLTCDVDCKAGTPPVRALNHDSFFNNEDTHPLDTRCAVKADLKSSIQ 682
            LSNERKK SS LDT  CDV+CK  TPPV A  + S   N+DT  L+T  A KAD+KS+I 
Sbjct: 654  LSNERKKLSSELDT--CDVECKVITPPVPASKNGSLSGNKDTCSLNTTSAAKADVKSTIN 711

Query: 683  DKPIREVNVKEFGMLKEQDGCLFESR-TAFSKCSPYEWPCVPSIYFPSLNSHLPPATDRL 741
            DKPIREVNVKEFGMLKE+D CLF+SR +AFSKCSPYEWP +PSIYFPS NSHLPPATDRL
Sbjct: 712  DKPIREVNVKEFGMLKERDKCLFDSRNSAFSKCSPYEWPGIPSIYFPSFNSHLPPATDRL 771

Query: 742  HLDVGRNWHNHFCHPFVPTLQQPRNTPIKGGCNQILSRPFPMSFDWPPVFRGGVNPSPNC 801
            HLDVGRNWHNHFCHPFVPTLQQ RNTP+            PMSFDWPPVFRGGV PSPNC
Sbjct: 772  HLDVGRNWHNHFCHPFVPTLQQARNTPV------------PMSFDWPPVFRGGVTPSPNC 819

Query: 802  NYDSGFVSRRQCTFSKGLAVQSMQVDATTTDDERKYPGDILDSPDLTNAQELADEFDNHW 861
            NYDS F+SRRQC FSKGLAV SMQVDATT DDER+Y GD LD PD  N Q   DEFDN +
Sbjct: 820  NYDSSFMSRRQCKFSKGLAVHSMQVDATTHDDERRYSGDTLDLPDQINTQ-FTDEFDNLY 878

Query: 862  VSEEEYDFHTVSGIDYNQYFGGGIMYWDTSDHPGKGFSRXXXXXXXXXXWALREADMNRT 921
            VSEEEYDFH VSGIDYNQYFGGG+MYW+ S++PGKGFSR          WALREADMNRT
Sbjct: 879  VSEEEYDFHAVSGIDYNQYFGGGVMYWNPSENPGKGFSRPPSLSSDDSLWALREADMNRT 938

Query: 922  VDDMVAFPSSYSTNGLTSPTAATFCSPFDPAGTGSQTVGYVVSGNEVPGNVLHSSPVSDA 981
            VDDMVAF SSYSTNGL SPTAATFCSPFDP GTG+QTVGYV+SGN+VPG VLHSS V+D+
Sbjct: 939  VDDMVAFSSSYSTNGLASPTAATFCSPFDPVGTGTQTVGYVMSGNDVPGKVLHSSSVTDS 998

Query: 982  VVDEDTSGSLSNNLTGDIEGKTGDAHPYPLLRPIIIPNFSRERSRCADHKSPCVPPNRRE 1041
             VD+D S SL NNL G+IEGK GD+HPYP+LRPIIIPN SRERS C DHKSPCVPP RRE
Sbjct: 999  AVDDDASSSLGNNLPGEIEGKAGDSHPYPILRPIIIPNLSRERSICVDHKSPCVPPTRRE 1058

Query: 1042 QPRIKRPPSXXXXXXXXXXXXXXXXXXXXXXKQRGFPTVRSGSSSPRHWGMRGWYHDGSN 1101
            QPRIKRPPS                      KQRGFPTVRSGSSSPRHWGMRGWYHDGSN
Sbjct: 1059 QPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQRGFPTVRSGSSSPRHWGMRGWYHDGSN 1118

Query: 1102 LEEACLRMDGAEVVWPSWRSNNXXXXXXXXXXXXXXXXDRLIAISQITRDQEHVRKTITL 1161
            LE+ CLRMDGAEVVWPSWR  N                DRLIA+SQI RDQEH       
Sbjct: 1119 LEDGCLRMDGAEVVWPSWRGKNIAVQPLIQPLPAALLQDRLIAMSQIARDQEH------- 1171

Query: 1162 SSTLSIYVGVHCGFLIIQPDVTFPLQPPELQSCSATSASLSLMHGMLHDEIDSFCKQVAA 1221
                              PDVT PLQPPEL+SCSATSASLS MHGMLHDEIDSFCKQVAA
Sbjct: 1172 ------------------PDVTLPLQPPELRSCSATSASLSSMHGMLHDEIDSFCKQVAA 1213

Query: 1222 ENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPPVRNLEP 1281
            EN+AR+PYINWAVKRVTRSLQVLWPRSRTNIFGSNATGM+LPTSDVDLVV LPPVRNLEP
Sbjct: 1214 ENLARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMALPTSDVDLVVSLPPVRNLEP 1273

Query: 1282 IKEAGILEGRNGIKETCLQHAARYLANQDWVKTDSLKTVENTAIPIIMLVVEVPLEVITS 1341
            IKEAGILEGRNGIKETCLQHAARYLANQ+WVK DSLKTVENTAIPIIMLVVEVP +VITS
Sbjct: 1274 IKEAGILEGRNGIKETCLQHAARYLANQEWVKNDSLKTVENTAIPIIMLVVEVPQDVITS 1333

Query: 1342 SAPVIHSLKEEPHCTPGEHVNDSHSDSIHLEGSALPKSSEINFYALKESKSVRVDISFKS 1401
            SAP +HSLKEE H T GEHVNDSHSD I LE SAL K S+ N YALK+S SVRVDISFKS
Sbjct: 1334 SAPTLHSLKEESHSTTGEHVNDSHSDIIQLEDSALLKRSQTNVYALKDSNSVRVDISFKS 1393

Query: 1402 PSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQ 1461
            PSHTGLQTT MVK LTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQ
Sbjct: 1394 PSHTGLQTTGMVKELTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQ 1453

Query: 1462 HEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERG 1510
            HEHHLGRPINQNYGSLL+DFLYFFGNVFDPR MRISVQGSGLYIKRERG
Sbjct: 1454 HEHHLGRPINQNYGSLLVDFLYFFGNVFDPRHMRISVQGSGLYIKRERG 1502


>Medtr2g079330.1 | nucleotidyltransferase family protein | HC |
            chr2:33389842-33396770 | 20130731
          Length = 514

 Score = 61.6 bits (148), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 1396 DISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLL 1455
            DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG+ SY L+ +
Sbjct: 230  DISFDL--ENGPKAAEYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTM 287

Query: 1456 IIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKR 1507
            ++  L++          N G LL+ F   +G   +   + +   G G + ++
Sbjct: 288  LMAMLRNVRQSQASAEHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQK 339


>Medtr2g079330.3 | nucleotidyltransferase family protein | HC |
            chr2:33389842-33395356 | 20130731
          Length = 363

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 1396 DISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLL 1455
            DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG+ SY L+ +
Sbjct: 230  DISFDL--ENGPKAAEYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTM 287

Query: 1456 IIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKR 1507
            ++  L++          N G LL+ F   +G   +   + +   G G + ++
Sbjct: 288  LMAMLRNVRQSQASAEHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQK 339