Miyakogusa Predicted Gene

Lj0g3v0126739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126739.1 Non Characterized Hit- tr|F6GV52|F6GV52_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,60.62,0,seg,NULL; Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; NTP_transf_2,Nucleoti,CUFF.7657.1
         (1158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g027425.1 | nucleotidyltransferase family protein | HC | c...  1599   0.0  
Medtr2g079330.1 | nucleotidyltransferase family protein | HC | c...    62   3e-09
Medtr2g079330.3 | nucleotidyltransferase family protein | HC | c...    60   9e-09
Medtr2g079330.2 | nucleotidyltransferase family protein | HC | c...    52   5e-06

>Medtr4g027425.1 | nucleotidyltransferase family protein | HC |
            chr4:9491496-9506334 | 20130731
          Length = 1573

 Score = 1599 bits (4140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 814/1155 (70%), Positives = 871/1155 (75%), Gaps = 43/1155 (3%)

Query: 6    TSSHNSEYDIGKLFFSSLGSVCTISDCILRKMRGFLMVISLDCTXXXXXXXXXXXXXXXX 65
            TSS NSEYD+  LFFSSLGSV TISDCILRK+RGFLMVISLDCT                
Sbjct: 389  TSSLNSEYDVETLFFSSLGSVSTISDCILRKLRGFLMVISLDCTKHELLEEFDKPSSGKP 448

Query: 66   XXXXXXXXXXXXXXXXXXXXXQNPVPKTSLGDISRENPLKDIDCTMDNKMKSDLMGSREL 125
                                 QNP  K+S+  +S EN  KDIDC +DN+ K+D+   REL
Sbjct: 449  KEKLGLSNRKKKGRTRNTKK-QNPAQKSSVNGVSHENIHKDIDCIVDNEKKTDIAKPREL 507

Query: 126  PDVSLGKEISMGNSSSTVKM-DGTRELDFGKPRTTPXXXXXXXXXXXXTAVDCTVGDSKK 184
            PDV L K+IS   SSSTVK+ D TREL+ GKPRTTP            T VD  V DS K
Sbjct: 508  PDVPLVKDISTEGSSSTVKIVDNTRELNVGKPRTTPRKRRKEKNKNKSTPVDSAVVDSHK 567

Query: 185  SIMHATSSTIIAEGEVAIRGRSFDSCTIPNVKNDNSIGNDILAXXXXXXXXXXGLARENN 244
            SI H  S+T I++ EVAI   SFDS TI NVKND+SIGNDILA          GL +EN+
Sbjct: 568  SITHVASTTAISKVEVAICDSSFDSSTIQNVKNDDSIGNDILASNSSLCCSLNGLTKENS 627

Query: 245  STXXXXXXXXXXXXXXXXXXXPQCCSLSNERKKNSSGLDTLTCDVDCKAGTPPVRALNHD 304
            ST                   PQCC LSNERKK SS LDT  CDV+CK  TPPV A  + 
Sbjct: 628  STRSVEEENVGGLAESCNSSGPQCCLLSNERKKLSSELDT--CDVECKVITPPVPASKNG 685

Query: 305  SFFNNEDTHPLDTRCAVKADLKSSIQDKPIREVNVKEFGMLKEQDGCLFESR-TAFSKCS 363
            S   N+DT  L+T  A KAD+KS+I DKPIREVNVKEFGMLKE+D CLF+SR +AFSKCS
Sbjct: 686  SLSGNKDTCSLNTTSAAKADVKSTINDKPIREVNVKEFGMLKERDKCLFDSRNSAFSKCS 745

Query: 364  PYEWPCVPSIYFPSLNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQPRNTPIKGGCNQ 423
            PYEWP +PSIYFPS NSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQ RNTP+      
Sbjct: 746  PYEWPGIPSIYFPSFNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQARNTPV------ 799

Query: 424  ILSRPFPMSFDWPPVFRGGVNPSPNCNYDSGFVSRRQCTFSKGLAVQSMQVDATTTDDER 483
                  PMSFDWPPVFRGGV PSPNCNYDS F+SRRQC FSKGLAV SMQVDATT DDER
Sbjct: 800  ------PMSFDWPPVFRGGVTPSPNCNYDSSFMSRRQCKFSKGLAVHSMQVDATTHDDER 853

Query: 484  KYPGDILDSPDLTNAQELADEFDNHWVSEEEYDFHTVSGIDYNQYFGGGIMYWDTSDHPG 543
            +Y GD LD PD  N Q   DEFDN +VSEEEYDFH VSGIDYNQYFGGG+MYW+ S++PG
Sbjct: 854  RYSGDTLDLPDQINTQ-FTDEFDNLYVSEEEYDFHAVSGIDYNQYFGGGVMYWNPSENPG 912

Query: 544  KGFSRXXXXXXXXXXWALREADMNRTVDDMVAFPSSYSTNGLTSPTAATFCSPFDPAGTG 603
            KGFSR          WALREADMNRTVDDMVAF SSYSTNGL SPTAATFCSPFDP GTG
Sbjct: 913  KGFSRPPSLSSDDSLWALREADMNRTVDDMVAFSSSYSTNGLASPTAATFCSPFDPVGTG 972

Query: 604  SQTVGYVVSGNEVPGNVLHSSPVSDAVVDEDTSGSLSNNLTGDIEGKTGDAHPYPLLRPI 663
            +QTVGYV+SGN+VPG VLHSS V+D+ VD+D S SL NNL G+IEGK GD+HPYP+LRPI
Sbjct: 973  TQTVGYVMSGNDVPGKVLHSSSVTDSAVDDDASSSLGNNLPGEIEGKAGDSHPYPILRPI 1032

Query: 664  IIPNFSRERSRCADHKSPCVPPNRREQPRIKRPPSXXXXXXXXXXXXXXXXXXXXXXKQR 723
            IIPN SRERS C DHKSPCVPP RREQPRIKRPPS                      KQR
Sbjct: 1033 IIPNLSRERSICVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQR 1092

Query: 724  GFPTVRSGSSSPRHWGMRGWYHDGSNLEEACLRMDGAEVVWPSWRSNNXXXXXXXXXXXX 783
            GFPTVRSGSSSPRHWGMRGWYHDGSNLE+ CLRMDGAEVVWPSWR  N            
Sbjct: 1093 GFPTVRSGSSSPRHWGMRGWYHDGSNLEDGCLRMDGAEVVWPSWRGKNIAVQPLIQPLPA 1152

Query: 784  XXXXDRLIAISQITRDQEHVRKTITLSSTLSIYVGVHCGFLIIQPDVTFPLQPPELQSCS 843
                DRLIA+SQI RDQEH                         PDVT PLQPPEL+SCS
Sbjct: 1153 ALLQDRLIAMSQIARDQEH-------------------------PDVTLPLQPPELRSCS 1187

Query: 844  ATSASLSLMHGMLHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGS 903
            ATSASLS MHGMLHDEIDSFCKQVAAEN+AR+PYINWAVKRVTRSLQVLWPRSRTNIFGS
Sbjct: 1188 ATSASLSSMHGMLHDEIDSFCKQVAAENLARKPYINWAVKRVTRSLQVLWPRSRTNIFGS 1247

Query: 904  NATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKTD 963
            NATGM+LPTSDVDLVV LPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQ+WVK D
Sbjct: 1248 NATGMALPTSDVDLVVSLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWVKND 1307

Query: 964  SLKTVENTAIPIIMLVVEVPLEVITSSAPVIHSLKEEPHCTPGEHVNDSHSDSIHLEGSA 1023
            SLKTVENTAIPIIMLVVEVP +VITSSAP +HSLKEE H T GEHVNDSHSD I LE SA
Sbjct: 1308 SLKTVENTAIPIIMLVVEVPQDVITSSAPTLHSLKEESHSTTGEHVNDSHSDIIQLEDSA 1367

Query: 1024 LPKSSEINFYALKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLA 1083
            L K S+ N YALK+S SVRVDISFKSPSHTGLQTT MVK LTEQFPAATPLALVLKQFLA
Sbjct: 1368 LLKRSQTNVYALKDSNSVRVDISFKSPSHTGLQTTGMVKELTEQFPAATPLALVLKQFLA 1427

Query: 1084 DRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMR 1143
            DRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLL+DFLYFFGNVFDPR MR
Sbjct: 1428 DRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLVDFLYFFGNVFDPRHMR 1487

Query: 1144 ISVQGSGLYIKRERG 1158
            ISVQGSGLYIKRERG
Sbjct: 1488 ISVQGSGLYIKRERG 1502


>Medtr2g079330.1 | nucleotidyltransferase family protein | HC |
            chr2:33389842-33396770 | 20130731
          Length = 514

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 1044 DISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLL 1103
            DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG+ SY L+ +
Sbjct: 230  DISFDL--ENGPKAAEYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTM 287

Query: 1104 IIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKR 1155
            ++  L++          N G LL+ F   +G   +   + +   G G + ++
Sbjct: 288  LMAMLRNVRQSQASAEHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQK 339


>Medtr2g079330.3 | nucleotidyltransferase family protein | HC |
            chr2:33389842-33395356 | 20130731
          Length = 363

 Score = 60.5 bits (145), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 1044 DISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLL 1103
            DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG+ SY L+ +
Sbjct: 230  DISFDL--ENGPKAAEYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTM 287

Query: 1104 IIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKR 1155
            ++  L++          N G LL+ F   +G   +   + +   G G + ++
Sbjct: 288  LMAMLRNVRQSQASAEHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQK 339


>Medtr2g079330.2 | nucleotidyltransferase family protein | HC |
            chr2:33389842-33396770 | 20130731
          Length = 361

 Score = 51.6 bits (122), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 1044 DISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLL 1103
            DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG+ SY L+ +
Sbjct: 230  DISFDL--ENGPKAAEYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTM 287

Query: 1104 IIRFLQHEHHLGRPINQNYGSLLM 1127
            ++  L++          N G LL+
Sbjct: 288  LMAMLRNVRQSQASAEHNLGLLLI 311