Miyakogusa Predicted Gene

Lj0g3v0126639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126639.1 tr|A9SZ39|A9SZ39_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_137774,30.85,1e-18,no description,NULL; PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; METHYLTRANSFERASE,NULL;
Methyltransf_11,,CUFF.7618.1
         (251 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g046723.1 | methyltransferase domain protein | HC | chr4:1...   260   1e-69
Medtr4g063440.1 | transmembrane protein, putative | LC | chr4:23...   218   4e-57
Medtr8g089585.1 | methyltransferase domain protein | HC | chr8:3...   108   7e-24
Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-2695691...    65   6e-11
Medtr1g099090.1 | methyltransferase | HC | chr1:44688687-4468799...    60   3e-09
Medtr7g070530.1 | methyltransferase domain protein | HC | chr7:2...    56   3e-08
Medtr4g013290.1 | methyltransferase domain protein | HC | chr4:3...    54   1e-07

>Medtr4g046723.1 | methyltransferase domain protein | HC |
           chr4:16537474-16539006 | 20130731
          Length = 293

 Score =  260 bits (664), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 137/202 (67%), Positives = 155/202 (76%)

Query: 50  TPDTCIPTHAPPHPPLRFPKSPCDYPPTRPHLPLHKKNHRLWSSRAWNTTVHSFSXXXXX 109
           TPDTC+P  AP  P  RFPKS CD+  +RP LP  KKN+RLWSSR WN  + SFS     
Sbjct: 92  TPDTCVPPEAPLKPHFRFPKSTCDFTSSRPSLPSDKKNNRLWSSRDWNNKLRSFSLIFLS 151

Query: 110 XXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVELLDSPPLVSRADPHNLPFFDE 169
                   N+++ LC+SAGAGHEV+AL  LGVEDVTG+ELL+S PLV RADPHNLPFFD 
Sbjct: 152 IRDIGLLPNNTKVLCISAGAGHEVSALQRLGVEDVTGIELLESLPLVRRADPHNLPFFDG 211

Query: 170 AFDLAFTARFDEALFPARFAAEMERVVRPGGACYVLVGECGISEVMEVVRLFRNSKLVSS 229
           AFD AFTARFDEALFP RFAAEMERVVR GG  +VLVGECG +EV EVVRLFRNS+ V S
Sbjct: 212 AFDFAFTARFDEALFPMRFAAEMERVVRGGGVSFVLVGECGANEVREVVRLFRNSRFVRS 271

Query: 230 DKVTLSGMRMTSILMRTRQSTS 251
             VTLS +RMTSILMRTR+S+S
Sbjct: 272 TNVTLSNVRMTSILMRTRKSSS 293


>Medtr4g063440.1 | transmembrane protein, putative | LC |
           chr4:23410932-23414324 | 20130731
          Length = 277

 Score =  218 bits (556), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 118/216 (54%), Positives = 135/216 (62%), Gaps = 30/216 (13%)

Query: 20  MDKEIDTFLKKLSFGXXXXXXXXXXXXXXHTPDTCIPTHAPPHPPLRFPKSPCDYPPTRP 79
           M+KEI+TFL+KLS                  P+T +P+ AP  P LRFPKS CD+  T  
Sbjct: 1   MEKEIETFLRKLSLVAIAIASLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHL 60

Query: 80  HLPLHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLL 139
           HLP HKKN+RLWSSR WN  +HSFS              H R L      GHEV+AL  L
Sbjct: 61  HLPSHKKNNRLWSSRDWNNKLHSFSRLFL----------HIRNL------GHEVSALQKL 104

Query: 140 GVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPG 199
           GVE+VTGVELLDSPPLVSR D HNL              FDEALFPARF A+MERVVR G
Sbjct: 105 GVEEVTGVELLDSPPLVSREDLHNL--------------FDEALFPARFVAKMERVVRAG 150

Query: 200 GACYVLVGECGISEVMEVVRLFRNSKLVSSDKVTLS 235
           G C+VLVGECG +EV EVV LFRNS+ VSS  V+L+
Sbjct: 151 GVCFVLVGECGANEVREVVGLFRNSRFVSSSNVSLN 186


>Medtr8g089585.1 | methyltransferase domain protein | HC |
           chr8:37259289-37258062 | 20130731
          Length = 250

 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 9/164 (5%)

Query: 83  LHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVE 142
           L+ K  ++W++R WN  +  F+            +  S+ALC+ A  G EV AL  + V 
Sbjct: 70  LNTKLRKIWTTRDWNRKIPVFAKFFSELKTKNLLQETSKALCIGARVGQEVEALRRINVV 129

Query: 143 DVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGAC 202
           D  G++L+  PPLV   D HN PF ++ FD  F+  FD AL+P +F  E+ER ++P G C
Sbjct: 130 DSIGMDLVPHPPLVVEGDFHNQPFGNDTFDFEFSNVFDHALYPHKFVGEIERTLKPNGVC 189

Query: 203 YVLVG---------ECGISEVMEVVRLFRNSKLVSSDKVTLSGM 237
            + V             +  V  +V LF+NS LV   KV   G+
Sbjct: 190 VLHVALSRRADKYSANDLYSVEPLVELFKNSVLVHVRKVDGFGL 233


>Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-26956911 |
           20130731
          Length = 494

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 91  WSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVELL 150
           +S + W  +V  ++              +S+ALC+    G +V AL  +GV D  G+   
Sbjct: 64  FSGKNWRRSVEHYASIFQDLIGEGSLLPNSKALCIDTPTGEDVLALKEIGVVDSVGIFKK 123

Query: 151 DSPPLVSRADPHNLPFFDEAFDLAFT--ARFDEALFPARFAAEMERVVRPGG 200
            SPPL+ + +    PF  ++FD  F+   R +E++ PA  A E+ R +RPGG
Sbjct: 124 PSPPLIIQGEGRKHPFPGDSFDFEFSGNGRLEESVKPAELAGEICRTLRPGG 175


>Medtr1g099090.1 | methyltransferase | HC | chr1:44688687-44687995 |
           20130731
          Length = 165

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 119 HSRALCVSAGAGHEVAALSLLGVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTAR 178
           +S+ALC+    G +V AL  +GV D  G+    SPPL+ + +    PF  ++FD  F+ +
Sbjct: 51  NSKALCIDTPTGEDVLALKEIGVVDSVGIFKKPSPPLIIQGEGRKHPFPGDSFDFEFSGK 110

Query: 179 ---FDEALFPARFAAEMERVVRPGG 200
              F+E + PA FA E+ R ++P G
Sbjct: 111 GGFFEEFVKPAEFAGEICRTLQPEG 135


>Medtr7g070530.1 | methyltransferase domain protein | HC |
           chr7:26047730-26045559 | 20130731
          Length = 509

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 119 HSRALCVSAGAGHEVAALSLLGVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTAR 178
            S++LCV    G +V AL  +GV++  G+      PLV       +PF D  FD  F+  
Sbjct: 109 ESKSLCVETVTGRDVFALREVGVKNAVGIARKSVKPLVKSGSGERIPFGDGEFDFVFSGE 168

Query: 179 --FDEALFPARFAAEMERVVRPGG 200
             F ++  PA FAAE+ R ++ GG
Sbjct: 169 GSFRKSAKPAVFAAEIARTMKHGG 192


>Medtr4g013290.1 | methyltransferase domain protein | HC |
           chr4:3695664-3697901 | 20130731
          Length = 509

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)

Query: 92  SSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVELLD 151
           +S+ W   V  +S               ++ALCV    G +V AL  +GV D  G+    
Sbjct: 86  TSKDWINGVQFYSSVFQNLIAAGYLSPETKALCVDTPTGRDVFALKEIGVVDSVGISKKA 145

Query: 152 SPPLVSRADPHNLPFFDEAFDLAFTAR--FDEALFPARFAAEMERVVRPGG 200
             PLV     H +PF + +FD  F+     + ++    FA E+ R ++P G
Sbjct: 146 MKPLVKSGVGHKIPFGNNSFDFVFSGDGGLERSVKGFEFAKEIARTLKPEG 196