Miyakogusa Predicted Gene

Lj0g3v0126039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126039.1 tr|B9GWI4|B9GWI4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_554365 PE=4
SV=1,45.45,9e-19,seg,NULL,CUFF.7565.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098300.1 | haloacid dehalogenase-like hydrolase | HC | ch...   136   4e-33

>Medtr8g098300.1 | haloacid dehalogenase-like hydrolase | HC |
           chr8:40938956-40936771 | 20130731
          Length = 378

 Score =  136 bits (343), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 84/119 (70%), Gaps = 9/119 (7%)

Query: 1   MVESMAATSLLGHRPICEGNLIRDVSGKRKSFNSCCRFPAVEFLGGRIVVAQPLPKSKHG 60
           MV+S+A TSLLGHRP+C GNLIRDVS KRKS N  CRF   EFLGGR+VV+ PL KSK  
Sbjct: 1   MVDSIATTSLLGHRPVCGGNLIRDVSAKRKSLN-ICRFTPAEFLGGRVVVSLPLTKSKQ- 58

Query: 61  XXXXXXXXXIKALAVELTREAHSYQEERLPEKDXXXXXXXXKIDSGFDPRPSLWPPANR 119
                    IKALAVELTREA++Y+E++LP+K         KID GFD +P LWPP NR
Sbjct: 59  -DGFLSCSSIKALAVELTREAYAYREDKLPKKG------NSKIDGGFDRKPGLWPPENR 110