Miyakogusa Predicted Gene

Lj0g3v0125449.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125449.1 tr|G7K4Q1|G7K4Q1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,80.86,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; seg,NULL;
PPR_2,Pentatr,CUFF.7518.1
         (820 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ...  1345   0.0  
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:...   574   e-163
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ...   558   e-158
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ...   557   e-158
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ...   556   e-158
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ...   556   e-158
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ...   554   e-157
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ...   548   e-155
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068...   542   e-154
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   532   e-151
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911...   529   e-150
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903...   528   e-149
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ...   525   e-149
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ...   523   e-148
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ...   523   e-148
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ...   522   e-148
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ...   520   e-147
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ...   520   e-147
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ...   516   e-146
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ...   513   e-145
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ...   513   e-145
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ...   510   e-144
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:...   502   e-142
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:...   502   e-142
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ...   498   e-140
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ...   497   e-140
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ...   497   e-140
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:...   495   e-140
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:...   495   e-140
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ...   495   e-140
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ...   491   e-139
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ...   491   e-138
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ...   491   e-138
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:...   491   e-138
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:...   490   e-138
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ...   489   e-138
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ...   489   e-138
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ...   489   e-138
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ...   487   e-137
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ...   486   e-137
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ...   484   e-136
Medtr4g113830.1 | organelle transcript processing protein, putat...   483   e-136
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ...   483   e-136
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758...   479   e-135
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ...   478   e-135
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   476   e-134
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ...   474   e-133
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ...   473   e-133
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ...   473   e-133
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ...   466   e-131
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:...   466   e-131
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:...   466   e-131
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ...   464   e-130
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ...   461   e-129
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ...   459   e-129
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ...   456   e-128
Medtr3g052720.1 | organelle transcript processing protein, putat...   456   e-128
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ...   454   e-127
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ...   453   e-127
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:...   453   e-127
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ...   452   e-127
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ...   452   e-127
Medtr1g059720.1 | organelle transcript processing protein, putat...   448   e-125
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:...   444   e-124
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:...   444   e-124
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ...   444   e-124
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ...   442   e-124
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ...   440   e-123
Medtr5g006420.1 | organelle transcript processing protein, putat...   438   e-122
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ...   438   e-122
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:...   437   e-122
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ...   437   e-122
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ...   435   e-121
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ...   434   e-121
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:...   433   e-121
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ...   433   e-121
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:...   431   e-120
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465...   431   e-120
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:...   431   e-120
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ...   429   e-120
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ...   427   e-119
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:...   427   e-119
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:...   427   e-119
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ...   426   e-119
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ...   426   e-119
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ...   423   e-118
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ...   421   e-117
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ...   416   e-116
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ...   413   e-115
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ...   411   e-114
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ...   410   e-114
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ...   410   e-114
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ...   408   e-113
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ...   405   e-112
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ...   405   e-112
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ...   400   e-111
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:...   398   e-110
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:...   398   e-110
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ...   397   e-110
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati...   395   e-110
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ...   392   e-108
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:...   391   e-108
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ...   389   e-108
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ...   387   e-107
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ...   386   e-107
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ...   382   e-106
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ...   382   e-106
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:...   380   e-105
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:...   380   e-105
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:...   379   e-105
Medtr3g117150.1 | organelle transcript processing protein, putat...   379   e-105
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ...   377   e-104
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |...   374   e-103
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:...   373   e-103
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ...   373   e-103
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:...   372   e-103
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ...   372   e-103
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |...   371   e-102
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:...   371   e-102
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:...   371   e-102
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ...   371   e-102
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ...   370   e-102
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ...   369   e-101
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:...   366   e-101
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   366   e-101
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ...   364   e-100
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:...   364   e-100
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:...   364   e-100
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:...   364   e-100
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:...   363   e-100
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:...   363   e-100
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:...   362   e-99 
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:...   360   3e-99
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ...   359   5e-99
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ...   358   1e-98
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:...   353   3e-97
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ...   348   1e-95
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:...   348   1e-95
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ...   348   1e-95
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:...   348   1e-95
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:...   345   9e-95
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:...   345   1e-94
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:...   344   2e-94
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602...   344   2e-94
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:...   343   4e-94
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:...   342   7e-94
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:...   341   1e-93
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:...   341   2e-93
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:...   341   2e-93
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:...   340   2e-93
Medtr8g066670.1 | chlororespiratory reduction protein, putative ...   337   3e-92
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:...   336   6e-92
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:...   334   3e-91
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:...   332   8e-91
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697...   332   9e-91
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:...   332   1e-90
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ...   332   1e-90
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:...   331   1e-90
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:...   330   4e-90
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:...   330   5e-90
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:...   329   6e-90
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:...   329   7e-90
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:...   328   1e-89
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:...   328   1e-89
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:...   325   8e-89
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ...   324   2e-88
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:...   323   4e-88
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:...   323   4e-88
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:...   322   1e-87
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:...   320   3e-87
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ...   320   5e-87
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:...   319   7e-87
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:...   318   2e-86
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ...   317   4e-86
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:...   314   3e-85
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:...   313   4e-85
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:...   313   4e-85
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:...   313   5e-85
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ...   311   2e-84
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ...   310   3e-84
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ...   310   3e-84
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:...   309   6e-84
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ...   308   2e-83
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:...   307   2e-83
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:...   307   3e-83
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:...   307   3e-83
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:...   307   3e-83
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:...   305   9e-83
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:...   305   1e-82
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ...   304   2e-82
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:...   304   2e-82
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:...   304   2e-82
Medtr6g460480.1 | organelle transcript processing protein, putat...   304   3e-82
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840...   303   4e-82
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:...   303   6e-82
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:...   301   1e-81
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:...   301   2e-81
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:...   300   4e-81
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:...   299   8e-81
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35...   297   4e-80
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ...   296   6e-80
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ...   293   6e-79
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:...   293   6e-79
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:...   293   7e-79
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:...   291   1e-78
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:...   291   1e-78
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:...   291   2e-78
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:...   290   4e-78
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:...   288   1e-77
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:...   285   2e-76
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ...   283   3e-76
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ...   283   3e-76
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ...   283   3e-76
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ...   283   3e-76
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:...   282   9e-76
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5...   281   1e-75
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:...   281   1e-75
Medtr5g031630.1 | PPR containing plant-like protein, putative | ...   280   4e-75
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:...   280   5e-75
Medtr2g082550.1 | PPR containing plant-like protein, putative | ...   280   5e-75
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:...   278   1e-74
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:...   278   1e-74
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ...   278   2e-74
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:...   277   3e-74
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:...   275   1e-73
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:...   275   1e-73
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:...   275   1e-73
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:...   275   2e-73
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:...   275   2e-73
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ...   274   3e-73
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ...   273   5e-73
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:...   272   9e-73
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:...   272   1e-72
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:...   270   5e-72
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:...   270   5e-72
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:...   270   5e-72
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:...   269   7e-72
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:...   269   8e-72
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:...   268   1e-71
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12...   267   3e-71
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:...   264   3e-70
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:...   261   2e-69
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:...   261   2e-69
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:...   261   3e-69
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:...   260   4e-69
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:...   259   6e-69
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ...   259   8e-69
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:...   255   1e-67
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:...   253   5e-67
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:...   252   1e-66
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:...   252   1e-66
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:...   251   2e-66
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:...   251   2e-66
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf...   251   2e-66
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:...   251   2e-66
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:...   251   2e-66
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:...   248   1e-65
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:...   246   7e-65
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:...   245   1e-64
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:...   245   1e-64
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1...   245   2e-64
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:...   243   4e-64
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:...   243   5e-64
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:...   243   5e-64
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:...   243   5e-64
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:...   243   6e-64
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:...   241   2e-63
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:...   239   1e-62
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:...   239   1e-62
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:...   237   3e-62
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:...   236   7e-62
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:...   231   3e-60
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:...   230   4e-60
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ...   229   1e-59
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:...   224   2e-58
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:...   216   7e-56
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:...   214   2e-55
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:...   212   1e-54
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:...   210   5e-54
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:...   209   1e-53
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:...   207   5e-53
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:...   197   3e-50
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ...   192   1e-48
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ...   191   2e-48
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ...   188   2e-47
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:...   186   6e-47
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:...   159   8e-39
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:...   149   8e-36
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4...   146   6e-35
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:...   145   2e-34
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249...   142   1e-33
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:...   130   5e-30
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:...   129   1e-29
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:...   124   4e-28
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ...   120   4e-27
Medtr5g025700.1 | DYW nucleic acid deaminase family protein | LC...   118   2e-26
Medtr6g024410.1 | DYW nucleic acid deaminase family protein | HC...   117   3e-26
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:...   115   2e-25
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:...   115   2e-25
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:...   115   2e-25
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:...   115   2e-25
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:...   115   2e-25
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:...   115   2e-25
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ...   114   3e-25
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:...   112   1e-24
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:...   112   2e-24
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963...   110   4e-24
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   110   7e-24
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:...   110   8e-24
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:...   110   8e-24
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:...   109   1e-23
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:...   108   2e-23
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ...   108   3e-23
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:...   106   1e-22
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ...   104   3e-22
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:...   104   4e-22
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ...   103   9e-22
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407...   102   2e-21
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:...   102   2e-21
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3...   101   3e-21
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:...   101   3e-21
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:...   101   4e-21
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311...   100   6e-21
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:...   100   7e-21
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ...   100   8e-21
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ...   100   8e-21
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ...    99   1e-20
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ...    99   1e-20
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ...    99   2e-20
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati...    99   2e-20
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ...    99   2e-20
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:...    99   2e-20
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:...    98   3e-20
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:...    97   5e-20
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:...    97   6e-20
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493...    96   1e-19
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ...    96   1e-19
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ...    96   1e-19
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ...    96   2e-19
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ...    96   2e-19
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:...    95   2e-19
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    95   3e-19
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati...    95   3e-19
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:...    95   3e-19
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ...    95   3e-19
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:...    95   3e-19
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:...    94   4e-19
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ...    93   1e-18
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:...    93   1e-18
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ...    92   2e-18
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:...    92   2e-18
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ...    92   2e-18
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:...    92   3e-18
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:...    91   6e-18
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ...    91   6e-18
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:...    90   7e-18
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ...    90   8e-18
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ...    90   8e-18
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ...    90   1e-17
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ...    90   1e-17
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:...    89   1e-17
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:...    89   1e-17
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ...    89   2e-17
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:...    89   2e-17
Medtr2g064660.1 | DYW nucleic acid deaminase family protein | HC...    89   2e-17
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ...    89   2e-17
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ...    88   3e-17
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ...    88   3e-17
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ...    88   3e-17
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:...    88   3e-17
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:...    88   4e-17
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:...    88   4e-17
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:...    88   4e-17
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:...    87   5e-17
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:...    87   6e-17
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ...    87   8e-17
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:...    87   8e-17
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:...    86   1e-16
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ...    86   1e-16
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:...    86   2e-16
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:...    86   2e-16
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:...    86   2e-16
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:...    86   2e-16
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:...    86   2e-16
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |...    86   2e-16
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046...    86   2e-16
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:...    85   2e-16
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:...    85   3e-16
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |...    85   4e-16
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:...    84   4e-16
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:...    84   4e-16
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |...    84   5e-16
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:...    84   7e-16
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |...    84   7e-16
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:...    83   9e-16
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ...    83   1e-15
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |...    83   1e-15
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ...    83   1e-15
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ...    82   1e-15
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:...    82   1e-15
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ...    82   2e-15
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:...    82   2e-15
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    82   2e-15
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |...    82   2e-15
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |...    82   2e-15
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ...    82   2e-15
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ...    82   2e-15
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:...    82   3e-15
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |...    82   3e-15
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ...    81   4e-15
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ...    81   4e-15
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ...    81   4e-15
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ...    81   4e-15
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:...    81   5e-15
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ...    80   7e-15
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ...    80   7e-15
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ...    80   7e-15
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ...    80   1e-14
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:...    80   1e-14
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ...    80   1e-14
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |...    79   1e-14
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:...    79   2e-14
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ...    79   2e-14
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:...    79   2e-14
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:...    79   2e-14
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:...    79   3e-14
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:...    79   3e-14
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:...    79   3e-14
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:...    79   3e-14
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:...    79   3e-14
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:...    78   3e-14
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    78   3e-14
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ...    78   3e-14
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:...    78   3e-14
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ...    78   3e-14
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:...    78   4e-14
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:...    78   4e-14
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |...    78   5e-14
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:...    77   5e-14
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ...    77   5e-14
Medtr8g106955.1 | DYW nucleic acid deaminase family protein | HC...    77   6e-14
Medtr8g091670.1 | PPR containing plant-like protein | HC | chr8:...    77   7e-14
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ...    77   8e-14
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |...    76   1e-13
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |...    76   1e-13
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |...    76   1e-13
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ...    76   1e-13
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ...    76   1e-13
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ...    76   1e-13
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:...    76   1e-13
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ...    76   1e-13
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ...    76   1e-13
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:...    75   2e-13
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:...    75   2e-13
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ...    75   2e-13
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:...    75   2e-13
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ...    75   3e-13
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ...    75   3e-13
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39...    74   4e-13
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ...    74   4e-13
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:...    74   5e-13
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati...    74   5e-13
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:...    74   6e-13
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:...    74   7e-13
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:...    74   7e-13
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ...    74   8e-13
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:...    73   1e-12
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:...    73   1e-12
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |...    72   2e-12
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:...    72   2e-12
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:...    72   2e-12
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:...    72   3e-12
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ...    71   4e-12
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati...    71   4e-12
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:...    71   4e-12
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ...    71   4e-12
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:...    71   4e-12
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |...    71   4e-12
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ...    71   4e-12
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:...    71   5e-12
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:...    70   6e-12
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ...    70   6e-12
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |...    70   6e-12
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831...    70   8e-12
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:...    70   9e-12
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ...    70   9e-12
Medtr7g024140.1 | PPR containing plant-like protein, putative | ...    70   1e-11
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731...    69   1e-11
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ...    69   1e-11
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:...    69   2e-11
Medtr7g058380.1 | PPR repeat protein | HC | chr7:21009807-210090...    69   2e-11
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505...    69   2e-11
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ...    69   2e-11
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ...    69   3e-11
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:...    68   3e-11
Medtr7g060720.1 | PPR containing plant-like protein, putative | ...    68   3e-11
Medtr7g025610.1 | PPR containing plant-like protein, putative | ...    68   4e-11
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ...    68   4e-11
Medtr3g051150.1 | editing factor, putative | LC | chr3:20182043-...    68   5e-11
Medtr6g060490.1 | PPR superfamily protein, putative | LC | chr6:...    67   5e-11

>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:41831683-41828172 | 20130731
          Length = 811

 Score = 1345 bits (3481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/780 (81%), Positives = 702/780 (90%), Gaps = 1/780 (0%)

Query: 42  LDSHSYAALLQQAIQN-RHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           LDSHSYA +LQQ I+N   P AGK LHC ILKRG  LDLFA NILLNFYVQ + L DASK
Sbjct: 32  LDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASK 91

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           LFDEMP TNTISFVTLAQG SR HQF  ALH ILR+FKEGHEVNPFV TT++KLLVSMDL
Sbjct: 92  LFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDL 151

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            H+CWT+HACVYK GH ADAFVGT+LIDAYSV GNVD AR VFD I CKDMVSWTGMV C
Sbjct: 152 AHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVAC 211

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           YAENCFYEESLQLF QMR+MGY+PNN+TI+ ALKSCLGLEAF VGKSVHGCALK CYD D
Sbjct: 212 YAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHD 271

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           L+VG  LLELYAKSG+I+DAQ  FEEMPK D+IPWSLMIARYAQSDRSKEAL+LF  MRQ
Sbjct: 272 LFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQ 331

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
           +SVVPNNFTFASVLQACA+ V L LGKQIHS VLK GL+SNVFVSNA+MDVYAKCGEIEN
Sbjct: 332 TSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIEN 391

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           SM LF E P++N+VTWNT+IVGYVQLGDGE+AMNLF+ M+ +DMQPTEVT+SSVLRA A 
Sbjct: 392 SMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASAS 451

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
            AAL+PGLQ+HSLTIKT YN D  VAN+LIDMYAKCGRINDARLTFDKM+KR+EVSWNAM
Sbjct: 452 LAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAM 511

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           ICGYSMHG+S EALNLF+ MQ T+CKPNKLTFVGVLSACSNAGLL KGQ+ F+SMS+DY+
Sbjct: 512 ICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYD 571

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           I+PCIEHYTCMV LLGRLG+FDEA+KLIGEI +QPSVMVWRALLGACV+ K +DLGR CA
Sbjct: 572 IKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCA 631

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYF 700
           QHVLEM+PHDD THVLLSNMYA A RWDNVA VRK M++K V+KEPGLSWVENQGVVHYF
Sbjct: 632 QHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYF 691

Query: 701 SVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAF 760
           SVGDTSHPD KLICAMLEWLNKKTRDAGYVPDCNAVLLDV+DDEKERHLWVHSERLALA+
Sbjct: 692 SVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAY 751

Query: 761 GLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           GL+R P +CSIRI+KNLRIC+DCHTV+KLIS+VVQREIV+RDINRFHHF+HGVCSCGDYW
Sbjct: 752 GLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811


>Medtr2g086150.1 | PPR containing plant-like protein | HC |
           chr2:36227786-36230819 | 20130731
          Length = 867

 Score =  574 bits (1480), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 294/760 (38%), Positives = 453/760 (59%), Gaps = 6/760 (0%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G+Q+HC  +K G    +     L++ Y++ + ++D  ++FDEM   N +S+ +L  G S 
Sbjct: 112 GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSW 171

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
           +  + +   +  ++  EG   N +  +T+I  LV+  +  +   +HA V K G +    V
Sbjct: 172 NGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPV 231

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
             SLI  YS  G +  AR VFD +  +D V+W  M+  Y  N    E  ++F +M++ G 
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGV 291

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
           +P + T  + +KSC  L    + K +   ALK+ +  D  V T L+   +K  ++ DA  
Sbjct: 292 KPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALS 351

Query: 303 FFEEMPK-KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
            F  M + K+V+ W+ MI+   Q+  + +A+ LF  MR+  V PN+FT++++L       
Sbjct: 352 LFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYP-- 409

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
             +   ++H+ V+K   + +  V  AL+D Y K G   +++ +F     ++ + W+ M+ 
Sbjct: 410 --VFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLA 467

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG-FAALDPGLQVHSLTIKTRYN 480
           GY Q G+ E+A  LF  +I   ++P E TFSSV+ ACA   AA + G Q H+  IK R N
Sbjct: 468 GYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLN 527

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
           N + V++AL+ MYAK G I+ A   F +  +R+ VSWN+MI GYS HG + +AL +F++M
Sbjct: 528 NALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEM 587

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
           Q+ N   + +TF+GV++AC++AGL++KGQ  F SM  D++I P ++HY+CM+ L  R G 
Sbjct: 588 QKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGM 647

Query: 601 FDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNM 660
            ++A+ +I E+PF P   VWR LLGA  V +N++LG   A+ ++ ++P D   +VLLSNM
Sbjct: 648 LEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNM 707

Query: 661 YAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWL 720
           YA A  W    +VRK M ++ VKKEPG SW+E +   + F  GD +HP +  I + L  L
Sbjct: 708 YAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSEL 767

Query: 721 NKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRIC 780
           + + +DAGY PD   V  D+ED++KE  L  HSERLA+AFGL+  P    I+I+KNLR+C
Sbjct: 768 SIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVC 827

Query: 781 VDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            DCH   KL+S V QR IVVRD NRFHHF+ G+CSCGDYW
Sbjct: 828 GDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  184 bits (468), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 216/407 (53%), Gaps = 7/407 (1%)

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y+ +   +E+L LF  +     +P+  T++     C G     +G+ VH   +K      
Sbjct: 68  YSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDH 127

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           + VGT L+++Y K+ ++ D +  F+EM +++V+ W+ ++A Y+ +       ELF  M+ 
Sbjct: 128 VSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQY 187

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
             V+PN +T ++V+ A   + ++ +G Q+H+ V+K G +  + V N+L+ +Y++ G + +
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRD 247

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F +   ++ VTWN+MI GYV+ G   +   +F+ M    ++PT +TF+SV+++CA 
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCAS 307

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK-REEVSWNA 519
              L     +    +K+ +  D  V  AL+   +KC  ++DA   F  M++ +  VSW A
Sbjct: 308 LRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTA 367

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           MI G   +G + +A+NLF++M++   KPN  T+  +L+      + +    + K+     
Sbjct: 368 MISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKT----- 422

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           N E      T ++    +LG   +AVK+  EI     +M W A+L  
Sbjct: 423 NYERSSSVGTALLDAYVKLGNTIDAVKVF-EIIEAKDLMAWSAMLAG 468



 Score =  170 bits (431), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 175/335 (52%), Gaps = 11/335 (3%)

Query: 300 AQLFFEEMPKKDVIPWSL-----MIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
           A   F+++P +   P +L     ++  Y++  ++KEAL LF  +  SS+ P+  T + V 
Sbjct: 44  AHNLFDKIPHR---PTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVF 100

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
             CA  +   LG+Q+H   +K GL  +V V  +L+D+Y K   + +   +F E  E+N V
Sbjct: 101 NICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVV 160

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           +W +++ GY   G       LF  M    + P   T S+V+ A      +  GLQVH++ 
Sbjct: 161 SWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMV 220

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
           +K  +   I V N+LI +Y++ G + DAR  FDKM+ R+ V+WN+MI GY  +G   E  
Sbjct: 221 VKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVF 280

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF-KSMSQDYNIEPCIEHYTCMVG 593
            +FNKMQ    KP  +TF  V+ +C++   L   + +  K++   +  +  +   T ++ 
Sbjct: 281 EIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV--ITALMV 338

Query: 594 LLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
            L +  + D+A+ L   +    +V+ W A++  C+
Sbjct: 339 ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCL 373



 Score =  162 bits (409), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 196/379 (51%), Gaps = 8/379 (2%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           ++A++++     R     K + C  LK G   D      L+    +   +DDA  LF  M
Sbjct: 297 TFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLM 356

Query: 106 PL-TNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
               N +S+  +  GC ++   D A+++  ++ +EG + N F  + I+    ++  P   
Sbjct: 357 EEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL----TVHYPVFV 412

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
             +HA V K  ++  + VGT+L+DAY   GN   A +VF+ I  KD+++W+ M+  YA+ 
Sbjct: 413 SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFG-VGKSVHGCALKACYDQDLYV 283
              EE+ +LF Q+   G +PN +T ++ + +C    A    GK  H  A+K   +  L V
Sbjct: 473 GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
            + L+ +YAK G+I  A   F+   ++D++ W+ MI+ Y+Q  ++K+ALE+F  M++ ++
Sbjct: 533 SSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNM 592

Query: 344 VPNNFTFASVLQACAAQVLLILG-KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
             +  TF  V+ AC    L+  G K  +S +    ++  +   + ++D+Y++ G +E +M
Sbjct: 593 DVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAM 652

Query: 403 ILFMESP-EQNEVTWNTMI 420
            +  E P       W T++
Sbjct: 653 GIINEMPFPPGATVWRTLL 671


>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50134416-50129873 | 20130731
          Length = 860

 Score =  558 bits (1437), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 291/776 (37%), Positives = 460/776 (59%), Gaps = 1/776 (0%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           ++  +L+     +  N GK++H   +  G   D F  N L+  Y +     D+ KLF  +
Sbjct: 85  TFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMI 144

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
                +S+  L     +S      + +  R+ +     N +  + I+     +    +  
Sbjct: 145 LEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGR 204

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           T+H  + K GH  D F   +L+D Y+  G ++ A  VF  +   D VSW  ++     + 
Sbjct: 205 TVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHE 264

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
           + + +L L  +M+  G  PN +T+++ALK+C  +    +G+ +H C++K   D DL+V  
Sbjct: 265 YNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAV 324

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKD-VIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
            L++LY+K   + DA+  ++ MP KD +I  + +I+ Y+Q    ++A+ LF  +   ++ 
Sbjct: 325 GLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENID 384

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
            N  T ++VL++ A+   + + KQIH+  +K G+ S+ +V N+L+D Y KC  I+ +  +
Sbjct: 385 FNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKI 444

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F E   ++ V + +MI  Y Q GD E+A+ L+  M   D++P     SS+L ACA  +A 
Sbjct: 445 FEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAY 504

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
           + G Q+H   IK  + +DI  +N+L++MYAKCG I DA   F ++ +R  VSW+AMI G 
Sbjct: 505 EQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGL 564

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC 584
           + HG   EAL +FN+M +    PN +T V VL AC++AGL+++G+  F++M + + I+P 
Sbjct: 565 AQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPT 624

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
            EH+ CM+ LLGR GK +EAV+L+  IPF+    VW ALLGA  + KN++LG   A+ + 
Sbjct: 625 QEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLF 684

Query: 645 EMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGD 704
            ++P   GT VLL+N+YA A  W+NVA+VRK M+   VKKEPG+SW+E +  +H F VGD
Sbjct: 685 TLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIVGD 744

Query: 705 TSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLR 764
            +H  +  I A L+ L++    AGY P     + +VE  EKE+ L+ HSE+LA+AFGL+ 
Sbjct: 745 RNHSRSDEIFAKLDELSELLSKAGYSPIIETDIHNVERSEKEKLLYHHSEKLAVAFGLIV 804

Query: 765 IPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            P    IR+ KNLR+CVDCHT +KL+S++V R+IVVRDINRFHHF++G CSCGDYW
Sbjct: 805 TPPGAPIRVKKNLRVCVDCHTFLKLVSKLVSRQIVVRDINRFHHFKNGSCSCGDYW 860



 Score =  279 bits (713), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 171/564 (30%), Positives = 293/564 (51%), Gaps = 4/564 (0%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNT-ISFVTLAQGCSRS 123
           +LH  ++K G        N LL FY        A  L D+     T +S+  L     ++
Sbjct: 2   ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
                AL     +   G + N F   T++K        ++   +HA     G ++DAFV 
Sbjct: 62  GFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVS 121

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            +L+  Y+ CG    ++++F  I    +VSW  +  C+ ++ F  E++ LF +M     R
Sbjct: 122 NTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVR 181

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           PN Y+++  L +C GL   G+G++VHG  +K  +  D +    L+++YAK+G I DA   
Sbjct: 182 PNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDV 241

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F EM   D + W+ +IA     + +  AL L + M++S   PN FT +S L+ACAA  L 
Sbjct: 242 FREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLK 301

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNE-VTWNTMIVG 422
            LG+QIHS  +K+  DS++FV+  L+D+Y+KC  ++++   +   P ++  +  N +I G
Sbjct: 302 DLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISG 361

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
           Y Q GD E+A++LF  +   ++   + T S+VL++ A    +    Q+H+L+IK    +D
Sbjct: 362 YSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSD 421

Query: 483 IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
             V N+L+D Y KC  I++A   F++    + V++ +MI  YS HG + EAL L+ +MQ 
Sbjct: 422 FYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQV 481

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
            + KP+      +L+AC+N    ++G+ L    +  +     I     +V +  + G  +
Sbjct: 482 ADIKPDPFVCSSLLNACANLSAYEQGKQL-HVHAIKFGFMSDIFASNSLVNMYAKCGSIE 540

Query: 603 EAVKLIGEIPFQPSVMVWRALLGA 626
           +A +   EIP Q  ++ W A++G 
Sbjct: 541 DADRAFSEIP-QRGIVSWSAMIGG 563



 Score =  231 bits (588), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 257/489 (52%), Gaps = 5/489 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           + +S + +L      R    G+ +H  ++K G  LD F+ N L++ Y +   ++DA  +F
Sbjct: 183 NEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVF 242

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            EM   +T+S+  +  GC      D AL ++  + K G   N F  ++ +K   +M L  
Sbjct: 243 REMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKD 302

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD-MVSWTGMVGCY 221
           +   IH+C  K    +D FV   LID YS C  +D AR+ +D +  KD +++   ++  Y
Sbjct: 303 LGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGY 362

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           ++    E+++ LF ++       N  T++  LKS   L+   V K +H  ++K     D 
Sbjct: 363 SQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDF 422

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           YV   LL+ Y K   I +A   FEE   +D++ ++ MI  Y+Q   ++EAL+L+  M+ +
Sbjct: 423 YVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVA 482

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            + P+ F  +S+L ACA       GKQ+H + +K G  S++F SN+L+++YAKCG IE++
Sbjct: 483 DIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDA 542

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
              F E P++  V+W+ MI G  Q G G++A+ +F+ M+ + + P  +T  SVL AC   
Sbjct: 543 DRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHA 602

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
             ++ G Q    T++ ++       +   +ID+  + G++N+A    + +    + S W 
Sbjct: 603 GLVNEGKQYFE-TMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWG 661

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 662 ALLGAARIH 670


>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:48574897-48578894 | 20130731
          Length = 993

 Score =  557 bits (1435), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/671 (40%), Positives = 414/671 (61%), Gaps = 1/671 (0%)

Query: 151 IIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD 210
           I+ ++ S++   +   IH  V + G      V  S I+ Y   G+V+ AR++F  +   D
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLE-AFGVGKSVH 269
           ++SW  ++   A +   E SL+LF  +   G  P+ +TIT+ L++C  LE ++ VG+ VH
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 270 GCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK 329
            CALKA    D +V T L+++Y+K G + +A+L F      D+  W+ M+  +  SD  +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 330 EALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM 389
           EAL LF  M +     +  TFA+  +A    V L  GKQIH+ V+K+    ++FV + ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 390 DVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEV 449
           D+Y KCGE++++  +F + P  ++V W T+I G V+ G+ E+A+  +  M    +QP E 
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           TF+++++AC+   AL+ G Q+H+  +K     D  V  +L+DMYAKCG I DA   F +M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
           + R    WNAMI G + HG + EALN FN+M+     P+++TF+GVLSACS++GL     
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
             F SM + Y +EP IEHY+C+V  L R G   EA K++  +PF+ S  ++R LL AC V
Sbjct: 723 KNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV 782

Query: 630 QKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
           Q + + G   A+ +  M P D   +VLLSN+YA A +W+N  S R  MKR  VKKEPG S
Sbjct: 783 QGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFS 842

Query: 690 WVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHL 749
           W++ +  VH F  GD SH +  LI   +E++ K+ ++ GYVPD    L+D+E+++KE  L
Sbjct: 843 WIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESAL 902

Query: 750 WVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHF 809
             HSE+LA+A+GL++ P + ++R++KNLR+C DCH  IK IS V QREIV+RD NRFHHF
Sbjct: 903 SYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHF 962

Query: 810 QHGVCSCGDYW 820
           + G+CSCGDYW
Sbjct: 963 RSGICSCGDYW 973



 Score =  243 bits (621), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 246/472 (52%), Gaps = 4/472 (0%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P DS +Y  +L       H   GKQ+H  +++ G    +   N  +N YV+   ++ A +
Sbjct: 294 PCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARR 353

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           +F +M   + IS+ T+  GC+RS   + +L + + L + G   + F  T++++   S++ 
Sbjct: 354 MFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEE 413

Query: 161 PH-VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
            + V   +H C  K G   D+FV T+LID YS  G ++ A  +F      D+ SW  M+ 
Sbjct: 414 SYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMH 473

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            +  +  Y E+L+LF  M   G + +  T   A K+   L     GK +H   +K  +  
Sbjct: 474 GFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHY 533

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           DL+V + +L++Y K G++  A+  F ++P  D + W+ +I+   ++   ++AL  +H MR
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMR 593

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
            + V P+ +TFA++++AC+    L  GKQIH+N++K+    + FV  +L+D+YAKCG IE
Sbjct: 594 LAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIE 653

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC- 458
           ++  LF     ++   WN MIVG  Q G+ E+A+N F+ M    + P  VTF  VL AC 
Sbjct: 654 DAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACS 713

Query: 459 -AGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
            +G  + D      S+        +I   + L+D  ++ G I +A      M
Sbjct: 714 HSGLTS-DAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score =  216 bits (550), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 283/582 (48%), Gaps = 32/582 (5%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           H+ + L +  +    P+A + L    +K G   D+F    L+N Y +F  + +A  LFD 
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
           MP+ + + +  + +        D  L +     + G   +   C ++  +L+ +      
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD---CVSVRTILMGVG----- 234

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
                 V++R  +      T L     VC +              D+  W   +  Y + 
Sbjct: 235 ---KKTVFERELEQVRAYATKLF----VCDDD------------SDVTVWNKTLSSYLQA 275

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
               E++  F  M       ++ T    L     L    +GK +HG  ++  +DQ + V 
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVA 335

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
              + +Y K+G +  A+  F +M + D+I W+ +I+  A+S   + +L LF  + +S ++
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395

Query: 345 PNNFTFASVLQACAA-QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
           P+ FT  SVL+AC++ +    +G+Q+H+  LK G+  + FVS AL+DVY+K G++E + +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           LF      +  +WN M+ G+    +  +A+ LFS M     +  ++TF++  +A      
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVR 515

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L  G Q+H++ IK R++ D+ V + ++DMY KCG +  AR  F+++   ++V+W  +I G
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS-MSQDYNIE 582
              +G   +AL  +++M+    +P++ TF  ++ ACS    L++G+ +  + M  +   +
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD 635

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
           P +   T +V +  + G  ++A  L   +  + SV +W A++
Sbjct: 636 PFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMI 674



 Score =  205 bits (522), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 166/599 (27%), Positives = 273/599 (45%), Gaps = 58/599 (9%)

Query: 49  ALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLT 108
           ++L+ AI +     GK+ H  I+  G   D +  N L+  Y +   L  A KLFD  P +
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 109 -------NTISFVTLAQGCSRSHQFDHALHVILRLFKEG------HEVNPFVCTTIIKLL 155
                  N I       G     +  H    I RL ++       H ++P     + KL 
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSP-----LFKLC 132

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
           +    P     +     K G Q D FV  +L++ Y+    +  AR +FD +  +D+V W 
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
            M+  Y E    +E L LF      G RP+  ++   L         GVGK       K 
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGK-------KT 237

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
            ++++L    E +  YA    + D           DV  W+  ++ Y Q+    EA++ F
Sbjct: 238 VFEREL----EQVRAYATKLFVCD--------DDSDVTVWNKTLSSYLQAGEGWEAVDCF 285

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
             M +S V  ++ T+  +L   A+   L LGKQIH  V++ G D  V V+N+ +++Y K 
Sbjct: 286 RDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKA 345

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G +  +  +F +  E + ++WNT+I G  + G  E ++ LF  ++ + + P + T +SVL
Sbjct: 346 GSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405

Query: 456 RACAGF-AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           RAC+    +   G QVH+  +K     D  V+ ALID+Y+K G++ +A L F   D  + 
Sbjct: 406 RACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDL 465

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
            SWNAM+ G+++     EAL LF+ M +   K +++TF     A      L +G+ +   
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525

Query: 575 MSQDYNIEPCIEHYTCMV--GLLG---RLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
           + +         HY   V  G+L    + G+   A K+  +IP  P  + W  ++  CV
Sbjct: 526 VIK------MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCV 577


>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:48574897-48577818 | 20130731
          Length = 973

 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/671 (40%), Positives = 414/671 (61%), Gaps = 1/671 (0%)

Query: 151 IIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD 210
           I+ ++ S++   +   IH  V + G      V  S I+ Y   G+V+ AR++F  +   D
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLE-AFGVGKSVH 269
           ++SW  ++   A +   E SL+LF  +   G  P+ +TIT+ L++C  LE ++ VG+ VH
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 270 GCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK 329
            CALKA    D +V T L+++Y+K G + +A+L F      D+  W+ M+  +  SD  +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 330 EALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM 389
           EAL LF  M +     +  TFA+  +A    V L  GKQIH+ V+K+    ++FV + ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 390 DVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEV 449
           D+Y KCGE++++  +F + P  ++V W T+I G V+ G+ E+A+  +  M    +QP E 
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           TF+++++AC+   AL+ G Q+H+  +K     D  V  +L+DMYAKCG I DA   F +M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
           + R    WNAMI G + HG + EALN FN+M+     P+++TF+GVLSACS++GL     
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
             F SM + Y +EP IEHY+C+V  L R G   EA K++  +PF+ S  ++R LL AC V
Sbjct: 723 KNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV 782

Query: 630 QKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
           Q + + G   A+ +  M P D   +VLLSN+YA A +W+N  S R  MKR  VKKEPG S
Sbjct: 783 QGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFS 842

Query: 690 WVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHL 749
           W++ +  VH F  GD SH +  LI   +E++ K+ ++ GYVPD    L+D+E+++KE  L
Sbjct: 843 WIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESAL 902

Query: 750 WVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHF 809
             HSE+LA+A+GL++ P + ++R++KNLR+C DCH  IK IS V QREIV+RD NRFHHF
Sbjct: 903 SYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHF 962

Query: 810 QHGVCSCGDYW 820
           + G+CSCGDYW
Sbjct: 963 RSGICSCGDYW 973



 Score =  243 bits (620), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 246/472 (52%), Gaps = 4/472 (0%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P DS +Y  +L       H   GKQ+H  +++ G    +   N  +N YV+   ++ A +
Sbjct: 294 PCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARR 353

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           +F +M   + IS+ T+  GC+RS   + +L + + L + G   + F  T++++   S++ 
Sbjct: 354 MFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEE 413

Query: 161 PH-VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
            + V   +H C  K G   D+FV T+LID YS  G ++ A  +F      D+ SW  M+ 
Sbjct: 414 SYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMH 473

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            +  +  Y E+L+LF  M   G + +  T   A K+   L     GK +H   +K  +  
Sbjct: 474 GFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHY 533

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           DL+V + +L++Y K G++  A+  F ++P  D + W+ +I+   ++   ++AL  +H MR
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMR 593

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
            + V P+ +TFA++++AC+    L  GKQIH+N++K+    + FV  +L+D+YAKCG IE
Sbjct: 594 LAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIE 653

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC- 458
           ++  LF     ++   WN MIVG  Q G+ E+A+N F+ M    + P  VTF  VL AC 
Sbjct: 654 DAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACS 713

Query: 459 -AGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
            +G  + D      S+        +I   + L+D  ++ G I +A      M
Sbjct: 714 HSGLTS-DAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score =  216 bits (550), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 283/582 (48%), Gaps = 32/582 (5%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           H+ + L +  +    P+A + L    +K G   D+F    L+N Y +F  + +A  LFD 
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
           MP+ + + +  + +        D  L +     + G   +   C ++  +L+ +      
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD---CVSVRTILMGVG----- 234

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
                 V++R  +      T L     VC +              D+  W   +  Y + 
Sbjct: 235 ---KKTVFERELEQVRAYATKLF----VCDD------------DSDVTVWNKTLSSYLQA 275

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
               E++  F  M       ++ T    L     L    +GK +HG  ++  +DQ + V 
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVA 335

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
              + +Y K+G +  A+  F +M + D+I W+ +I+  A+S   + +L LF  + +S ++
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395

Query: 345 PNNFTFASVLQACAA-QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
           P+ FT  SVL+AC++ +    +G+Q+H+  LK G+  + FVS AL+DVY+K G++E + +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           LF      +  +WN M+ G+    +  +A+ LFS M     +  ++TF++  +A      
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVR 515

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L  G Q+H++ IK R++ D+ V + ++DMY KCG +  AR  F+++   ++V+W  +I G
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS-MSQDYNIE 582
              +G   +AL  +++M+    +P++ TF  ++ ACS    L++G+ +  + M  +   +
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD 635

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
           P +   T +V +  + G  ++A  L   +  + SV +W A++
Sbjct: 636 PFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMI 674



 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/599 (27%), Positives = 273/599 (45%), Gaps = 58/599 (9%)

Query: 49  ALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLT 108
           ++L+ AI +     GK+ H  I+  G   D +  N L+  Y +   L  A KLFD  P +
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 109 -------NTISFVTLAQGCSRSHQFDHALHVILRLFKEG------HEVNPFVCTTIIKLL 155
                  N I       G     +  H    I RL ++       H ++P     + KL 
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSP-----LFKLC 132

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
           +    P     +     K G Q D FV  +L++ Y+    +  AR +FD +  +D+V W 
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
            M+  Y E    +E L LF      G RP+  ++   L         GVGK       K 
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGK-------KT 237

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
            ++++L    E +  YA    + D           DV  W+  ++ Y Q+    EA++ F
Sbjct: 238 VFEREL----EQVRAYATKLFVCD--------DDSDVTVWNKTLSSYLQAGEGWEAVDCF 285

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
             M +S V  ++ T+  +L   A+   L LGKQIH  V++ G D  V V+N+ +++Y K 
Sbjct: 286 RDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKA 345

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G +  +  +F +  E + ++WNT+I G  + G  E ++ LF  ++ + + P + T +SVL
Sbjct: 346 GSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405

Query: 456 RACAGF-AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           RAC+    +   G QVH+  +K     D  V+ ALID+Y+K G++ +A L F   D  + 
Sbjct: 406 RACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDL 465

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
            SWNAM+ G+++     EAL LF+ M +   K +++TF     A      L +G+ +   
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525

Query: 575 MSQDYNIEPCIEHYTCMV--GLLG---RLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
           + +         HY   V  G+L    + G+   A K+  +IP  P  + W  ++  CV
Sbjct: 526 VIK------MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCV 577


>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:48574897-48577818 | 20130731
          Length = 973

 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/671 (40%), Positives = 414/671 (61%), Gaps = 1/671 (0%)

Query: 151 IIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD 210
           I+ ++ S++   +   IH  V + G      V  S I+ Y   G+V+ AR++F  +   D
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLE-AFGVGKSVH 269
           ++SW  ++   A +   E SL+LF  +   G  P+ +TIT+ L++C  LE ++ VG+ VH
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 270 GCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK 329
            CALKA    D +V T L+++Y+K G + +A+L F      D+  W+ M+  +  SD  +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 330 EALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM 389
           EAL LF  M +     +  TFA+  +A    V L  GKQIH+ V+K+    ++FV + ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 390 DVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEV 449
           D+Y KCGE++++  +F + P  ++V W T+I G V+ G+ E+A+  +  M    +QP E 
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           TF+++++AC+   AL+ G Q+H+  +K     D  V  +L+DMYAKCG I DA   F +M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
           + R    WNAMI G + HG + EALN FN+M+     P+++TF+GVLSACS++GL     
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
             F SM + Y +EP IEHY+C+V  L R G   EA K++  +PF+ S  ++R LL AC V
Sbjct: 723 KNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRV 782

Query: 630 QKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
           Q + + G   A+ +  M P D   +VLLSN+YA A +W+N  S R  MKR  VKKEPG S
Sbjct: 783 QGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFS 842

Query: 690 WVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHL 749
           W++ +  VH F  GD SH +  LI   +E++ K+ ++ GYVPD    L+D+E+++KE  L
Sbjct: 843 WIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESAL 902

Query: 750 WVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHF 809
             HSE+LA+A+GL++ P + ++R++KNLR+C DCH  IK IS V QREIV+RD NRFHHF
Sbjct: 903 SYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHF 962

Query: 810 QHGVCSCGDYW 820
           + G+CSCGDYW
Sbjct: 963 RSGICSCGDYW 973



 Score =  243 bits (620), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 246/472 (52%), Gaps = 4/472 (0%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P DS +Y  +L       H   GKQ+H  +++ G    +   N  +N YV+   ++ A +
Sbjct: 294 PCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARR 353

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           +F +M   + IS+ T+  GC+RS   + +L + + L + G   + F  T++++   S++ 
Sbjct: 354 MFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEE 413

Query: 161 PH-VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
            + V   +H C  K G   D+FV T+LID YS  G ++ A  +F      D+ SW  M+ 
Sbjct: 414 SYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMH 473

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            +  +  Y E+L+LF  M   G + +  T   A K+   L     GK +H   +K  +  
Sbjct: 474 GFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHY 533

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           DL+V + +L++Y K G++  A+  F ++P  D + W+ +I+   ++   ++AL  +H MR
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMR 593

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
            + V P+ +TFA++++AC+    L  GKQIH+N++K+    + FV  +L+D+YAKCG IE
Sbjct: 594 LAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIE 653

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC- 458
           ++  LF     ++   WN MIVG  Q G+ E+A+N F+ M    + P  VTF  VL AC 
Sbjct: 654 DAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACS 713

Query: 459 -AGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
            +G  + D      S+        +I   + L+D  ++ G I +A      M
Sbjct: 714 HSGLTS-DAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score =  216 bits (550), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 283/582 (48%), Gaps = 32/582 (5%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           H+ + L +  +    P+A + L    +K G   D+F    L+N Y +F  + +A  LFD 
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
           MP+ + + +  + +        D  L +     + G   +   C ++  +L+ +      
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD---CVSVRTILMGVG----- 234

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
                 V++R  +      T L     VC +              D+  W   +  Y + 
Sbjct: 235 ---KKTVFERELEQVRAYATKLF----VCDD------------DSDVTVWNKTLSSYLQA 275

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
               E++  F  M       ++ T    L     L    +GK +HG  ++  +DQ + V 
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVA 335

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
              + +Y K+G +  A+  F +M + D+I W+ +I+  A+S   + +L LF  + +S ++
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395

Query: 345 PNNFTFASVLQACAA-QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
           P+ FT  SVL+AC++ +    +G+Q+H+  LK G+  + FVS AL+DVY+K G++E + +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           LF      +  +WN M+ G+    +  +A+ LFS M     +  ++TF++  +A      
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVR 515

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L  G Q+H++ IK R++ D+ V + ++DMY KCG +  AR  F+++   ++V+W  +I G
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS-MSQDYNIE 582
              +G   +AL  +++M+    +P++ TF  ++ ACS    L++G+ +  + M  +   +
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD 635

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
           P +   T +V +  + G  ++A  L   +  + SV +W A++
Sbjct: 636 PFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMI 674



 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/599 (27%), Positives = 273/599 (45%), Gaps = 58/599 (9%)

Query: 49  ALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLT 108
           ++L+ AI +     GK+ H  I+  G   D +  N L+  Y +   L  A KLFD  P +
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 109 -------NTISFVTLAQGCSRSHQFDHALHVILRLFKEG------HEVNPFVCTTIIKLL 155
                  N I       G     +  H    I RL ++       H ++P     + KL 
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSP-----LFKLC 132

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
           +    P     +     K G Q D FV  +L++ Y+    +  AR +FD +  +D+V W 
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
            M+  Y E    +E L LF      G RP+  ++   L         GVGK       K 
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGK-------KT 237

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
            ++++L    E +  YA    + D           DV  W+  ++ Y Q+    EA++ F
Sbjct: 238 VFEREL----EQVRAYATKLFVCD--------DDSDVTVWNKTLSSYLQAGEGWEAVDCF 285

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
             M +S V  ++ T+  +L   A+   L LGKQIH  V++ G D  V V+N+ +++Y K 
Sbjct: 286 RDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKA 345

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G +  +  +F +  E + ++WNT+I G  + G  E ++ LF  ++ + + P + T +SVL
Sbjct: 346 GSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405

Query: 456 RACAGF-AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           RAC+    +   G QVH+  +K     D  V+ ALID+Y+K G++ +A L F   D  + 
Sbjct: 406 RACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDL 465

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
            SWNAM+ G+++     EAL LF+ M +   K +++TF     A      L +G+ +   
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525

Query: 575 MSQDYNIEPCIEHYTCMV--GLLG---RLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
           + +         HY   V  G+L    + G+   A K+  +IP  P  + W  ++  CV
Sbjct: 526 VIK------MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCV 577


>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr6:10235820-10240817 | 20130731
          Length = 1144

 Score =  554 bits (1428), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 285/737 (38%), Positives = 431/737 (58%)

Query: 63   GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
            GKQLH  +LK+G   + +  N L+  Y +   L  A ++F  M   + +S+ +L  G ++
Sbjct: 303  GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 362

Query: 123  SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
                + AL +  ++  +  + +     +++    S+         H+   K G  +D  V
Sbjct: 363  QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 422

Query: 183  GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
              SL+D Y  C ++  A + F     +++V W  M+  Y +     +S Q+F QM++ G 
Sbjct: 423  EGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGI 482

Query: 243  RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
             PN +T  + LK+C  L A  +G+ +H   LK  +  ++YV + L+++YAK G +  A  
Sbjct: 483  VPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALK 542

Query: 303  FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
             F  + + DV+ W+ MIA Y Q D+  EAL LF  M+   +  +N  FAS + ACA    
Sbjct: 543  IFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQA 602

Query: 363  LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
            L  G+QIH+     G   ++ + NAL+ +YA+CG++  +   F +   ++ V+WN+++ G
Sbjct: 603  LDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSG 662

Query: 423  YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
            + Q G  E+A+N+F+ M    ++    TF S + A A  A +  G Q+H +  KT Y+++
Sbjct: 663  FAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSE 722

Query: 483  IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
              V+NALI +YAKCG I+DA   F +M  + E+SWN+MI GYS HG   EAL LF  M+Q
Sbjct: 723  TEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQ 782

Query: 543  TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
             +  PN +TFVGVLSACS+ GL+D+G S F+SMS+ +N+ P  EHY C+V LLGR G   
Sbjct: 783  LDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLS 842

Query: 603  EAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYA 662
             A + + E+P QP  MVWR LL AC V KNID+G F A H+LE++P D  T+VL+SNMYA
Sbjct: 843  RAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYA 902

Query: 663  VAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNK 722
            V+ +WD     R+ MK +GVKKEPG SWVE    VH F  GD +HP   +I   L  L+ 
Sbjct: 903  VSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDF 962

Query: 723  KTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVD 782
            +  + GYVP CN++L D E  +K+    +HSERLA+AFGLL + S+  + + KNLR+C D
Sbjct: 963  RAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCED 1022

Query: 783  CHTVIKLISEVVQREIV 799
            CH  IK +S++  R I+
Sbjct: 1023 CHNWIKHVSKITDRVII 1039



 Score =  315 bits (807), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 304/561 (54%), Gaps = 2/561 (0%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           +Q+H   +  G     F  N L++ Y +   L  A K+F+ +   +++S+V +  G S++
Sbjct: 203 EQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQN 262

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
              + A+ +  ++   G    P++ ++++     ++       +H  V K+G  ++ +V 
Sbjct: 263 GYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVC 322

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            +L+  YS  GN+ +A Q+F  +  +D VS+  ++   A+  +   +L LF +M +   +
Sbjct: 323 NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK 382

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P+  T+ + L +C  + A   GK  H  A+KA    D+ V   LL+LY K  DI  A  F
Sbjct: 383 PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 442

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F     ++V+ W++M+  Y Q D   ++ ++F  M+   +VPN FT+ S+L+ C      
Sbjct: 443 FLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGAT 502

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
            LG+QIH+ VLK G   NV+VS+ L+D+YAK G++++++ +F    E + V+W  MI GY
Sbjct: 503 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGY 562

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            Q     +A+NLF  M    ++   + F+S + ACAG  ALD G Q+H+ +  + Y++D+
Sbjct: 563 TQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDL 622

Query: 484 AVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT 543
           ++ NAL+ +YA+CG++ +A   FD++  ++ VSWN+++ G++  G   EALN+F +M + 
Sbjct: 623 SIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKA 682

Query: 544 NCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDE 603
             + N  TF   +SA +N   +  G+ +   M +    +   E    ++ L  + G  D+
Sbjct: 683 GLEINSFTFGSAVSAAANIANVRIGKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDD 741

Query: 604 AVKLIGEIPFQPSVMVWRALL 624
           A +   E+P +  +  W +++
Sbjct: 742 AERHFFEMPDKNEIS-WNSMI 761



 Score =  208 bits (529), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 3/461 (0%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H  + K G   +  +   LID Y   G+++ A  VFD +  + +  W  +   +     
Sbjct: 103 LHGKILKMGFCDEVVLCERLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERL 162

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLG-LEAFGVGKSVHGCALKACYDQDLYVGT 285
                 LF +M       +       L+ C G   +F   + +H   + + ++   ++  
Sbjct: 163 MGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICN 222

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            L++LY K+G +  A+  FE +  +D + W  MI+  +Q+   +EA+ LF  M  S + P
Sbjct: 223 PLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICP 282

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
             + F+SVL AC        GKQ+H  VLK G  S  +V NAL+ +Y++ G + ++  +F
Sbjct: 283 TPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIF 342

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
               +++ V++N++I G  Q G   +A+ LF  M  +  +P  VT +S+L ACA   AL 
Sbjct: 343 HCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALP 402

Query: 466 PGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYS 525
            G Q HS  IK    +DI V  +L+D+Y KC  I  A   F   +    V WN M+ GY 
Sbjct: 403 NGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYG 462

Query: 526 MHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCI 585
                 ++  +F +MQ     PN+ T+  +L  C+  G  D G+ +   + +    +  +
Sbjct: 463 QLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNV 521

Query: 586 EHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
              + ++ +  + GK D A+K+   +  +  V+ W A++  
Sbjct: 522 YVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAG 561



 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 164/313 (52%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +Y ++L+        + G+Q+H  +LK G   +++  ++L++ Y +   LD A K+F  +
Sbjct: 488 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL 547

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
              + +S+  +  G ++  +F  AL++   +  +G + +     + I     +       
Sbjct: 548 KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGR 607

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            IHA     G+  D  +G +L+  Y+ CG V  A   FD I+ KD VSW  +V  +A++ 
Sbjct: 608 QIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSG 667

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
           ++EE+L +F QM   G   N++T  +A+ +   +    +GK +HG   K  YD +  V  
Sbjct: 668 YFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN 727

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            L+ LYAK G I DA+  F EMP K+ I W+ MI  Y+Q     EAL+LF  M+Q  V+P
Sbjct: 728 ALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLP 787

Query: 346 NNFTFASVLQACA 358
           N+ TF  VL AC+
Sbjct: 788 NHVTFVGVLSACS 800



 Score =  174 bits (442), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 224/490 (45%), Gaps = 40/490 (8%)

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           M   G R N+ T    L+ CL   +F  G  +HG  LK  +  ++ +   L++ Y   GD
Sbjct: 72  MEQHGVRANSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGD 131

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
           +  A   F+EMP + +  W+ +   +           LF  M   +V  +   FA VL+ 
Sbjct: 132 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 191

Query: 357 CAAQ-VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVT 415
           C+   V     +QIH+  +  G +S+ F+ N L+D+Y K G + ++  +F     ++ V+
Sbjct: 192 CSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVS 251

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           W  MI G  Q G  E+AM LF  M  + + PT   FSSVL AC      + G Q+H L +
Sbjct: 252 WVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVL 311

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           K  ++++  V NAL+ +Y++ G ++ A   F  M +R+ VS+N++I G +  G    AL 
Sbjct: 312 KQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALA 371

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ-----SLFKSMSQDYNIEPCI----- 585
           LF KM     KP+ +T   +LSAC++ G L  G+     ++   M+ D  +E  +     
Sbjct: 372 LFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYV 431

Query: 586 -------EH-------------YTCMVGLLGRLGKFDEAVKLIGEIPFQ---PSVMVWRA 622
                   H             +  M+   G+L   +++ ++  ++  +   P+   + +
Sbjct: 432 KCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPS 491

Query: 623 LLGACVVQKNIDLGRFCAQHVLEMK-PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           +L  C      DLG      VL+     +     +L +MYA   + D+   + + +K   
Sbjct: 492 ILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKEND 551

Query: 682 VKKEPGLSWV 691
           V     +SW 
Sbjct: 552 V-----VSWT 556



 Score =  123 bits (309), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 19/308 (6%)

Query: 305 EEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLI 364
           +E+P+K+            + D +   +   H M Q  V  N+ TF  +L+ C       
Sbjct: 50  DEIPEKE-----------NEMDGNASGIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFY 98

Query: 365 LGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYV 424
            G ++H  +LK+G    V +   L+D Y   G++  ++ +F E P ++   WN +   ++
Sbjct: 99  DGLKLHGKILKMGFCDEVVLCERLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFI 158

Query: 425 QLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA-ALDPGLQVHSLTIKTRYNNDI 483
                 +   LF  M+  +++  E  F+ VLR C+G A +     Q+H+ TI + + +  
Sbjct: 159 AERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESST 218

Query: 484 AVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT 543
            + N LID+Y K G ++ A+  F+ +  R+ VSW AMI G S +G   EA+ LF +M  +
Sbjct: 219 FICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTS 278

Query: 544 NCKPNKLTFVGVLSACSNAGLLDKGQSLFK-SMSQDYNIEPCIEHYTC--MVGLLGRLGK 600
              P    F  VLSAC+     + G+ L    + Q ++ E     Y C  +V L  R G 
Sbjct: 279 GICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSET----YVCNALVTLYSRSGN 334

Query: 601 FDEAVKLI 608
              A ++ 
Sbjct: 335 LSSAEQIF 342



 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 22/272 (8%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           + G+Q+H      G   DL   N L++ Y +   + +A   FD++   + +S+ +L  G 
Sbjct: 604 DQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGF 663

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
           ++S  F+ AL++  ++ K G E+N F   + +    ++    +   IH  + K G+ ++ 
Sbjct: 664 AQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSET 723

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
            V  +LI  Y+ CG +D A + F  +  K+ +SW  M+  Y+++    E+L+LF  M+ +
Sbjct: 724 EVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQL 783

Query: 241 GYRPNNYTITAALKSCL-------GLEAFGVGKSVHGCALK----ACYDQDLYVGTELLE 289
              PN+ T    L +C        G+  F      H    K    AC          +++
Sbjct: 784 DVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYAC----------VVD 833

Query: 290 LYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
           L  +SG +  A+ F EEMP + D + W  +++
Sbjct: 834 LLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLS 865


>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:3128021-3130773 | 20130731
          Length = 810

 Score =  548 bits (1411), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 296/760 (38%), Positives = 449/760 (59%), Gaps = 8/760 (1%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           Q+   I+K G          L++ + +F  +++A ++FD +     + + TL +G  ++ 
Sbjct: 55  QILPHIIKNGFYNQHLFQTKLISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNS 114

Query: 125 QFDHALHVILRLFKEGHEVNPFV--CTTIIKLL-VSMDLPHVCWTIHACVYKRGHQADAF 181
               +L    R+  +  EV P V   T +++L   + DL      +H  + K G +++ F
Sbjct: 115 SLSESLSFFKRM--QNDEVEPVVYDFTYLLQLCGENFDLKK-GMEVHGMLIKNGFESNLF 171

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
             TS+++ Y+ C  +D A ++F  +  +D+V W  +V  YA+N F  ++L+L   M+  G
Sbjct: 172 AMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDG 231

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            + ++ T+ + L +   ++   +G+SVHG A++  +D  + V T LL++Y K G++   +
Sbjct: 232 KKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGR 291

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
           L F+ M  K+V+ W+ +I   AQ+  S+EA   F  M +  V P N +    L AC+   
Sbjct: 292 LVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLG 351

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
            L  GK +H  + ++ L SNV V N+L+ +Y+KC  ++ +  +F     +  VTWN MI+
Sbjct: 352 DLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMIL 411

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
           GY Q G   +A+NLF +M    ++P   TF SV+ A A  +       +H L I+T  + 
Sbjct: 412 GYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDT 471

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           ++ VA AL+DMYAKCG I  AR  FD M +R  ++WNAMI GY  HGL   AL+LF+ MQ
Sbjct: 472 NVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQ 531

Query: 542 -QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
            + + KPN +TF+ V+SACS++G +++G   FK M + Y +EP ++HY  MV LLGR GK
Sbjct: 532 NEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGK 591

Query: 601 FDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNM 660
            D+A K I E+P +P + V  A+LGAC + KNI+LG   A  + E+ P + G ++L++NM
Sbjct: 592 LDDAWKFIHEMPIKPGITVLGAMLGACKIHKNIELGEKAADRLFELDPDEGGYYMLVANM 651

Query: 661 YAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWL 720
           YA A  WD VA VR  M++KG+ K PG S VE +  VH F  G T+HP +K I A LE L
Sbjct: 652 YASASMWDKVAKVRTAMEKKGLHKTPGCSLVEWRNEVHAFYSGSTNHPQSKRIYAFLETL 711

Query: 721 NKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRIC 780
             + R AGYVPD N  + DVE+  KE+ +  HSERLA+AFGLL      +I + KNLR+C
Sbjct: 712 GDEIRAAGYVPD-NDSIHDVEEYVKEQLVSSHSERLAIAFGLLNTRPGTTIHVRKNLRVC 770

Query: 781 VDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            DCH   K IS V  REI+VRD+ RFHHF++G CSCGDYW
Sbjct: 771 GDCHEATKYISLVTGREIIVRDLQRFHHFKNGRCSCGDYW 810



 Score =  224 bits (571), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 240/461 (52%), Gaps = 4/461 (0%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           + +  LLQ   +N     G ++H  ++K G   +LFA   ++N Y +   +DDA K+F  
Sbjct: 136 YDFTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVR 195

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
           MP  + + + T+  G +++     AL ++L + ++G + +     +++  +  +    + 
Sbjct: 196 MPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIG 255

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
            ++H    + G  +   V T+L+D Y  CG V+  R VF  +  K++VSW  ++   A+N
Sbjct: 256 RSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQN 315

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
              EE+   F +M      P N ++  AL +C  L     GK VH    +     ++ V 
Sbjct: 316 GESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVM 375

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
             L+ +Y+K   +  A   F+ +  K  + W+ MI  YAQ+    EAL LF  M+   + 
Sbjct: 376 NSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIK 435

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           P++FTF SV+ A A   +    K IH   ++  +D+NVFV+ AL+D+YAKCG IE +  L
Sbjct: 436 PDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGAIETAREL 495

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN-DMQPTEVTFSSVLRACAGFAA 463
           F    E++ +TWN MI GY   G G+ A++LF  M     ++P ++TF SV+ AC+    
Sbjct: 496 FDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGF 555

Query: 464 LDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDA 502
           ++ GL    + +K  Y  + ++ +  A++D+  + G+++DA
Sbjct: 556 VEEGLYYFKI-MKEGYGLEPSMDHYGAMVDLLGRAGKLDDA 595


>Medtr2g035620.1 | PPR containing plant protein | HC |
           chr2:15068017-15065354 | 20130731
          Length = 887

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/816 (36%), Positives = 455/816 (55%), Gaps = 46/816 (5%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P D+ ++ A+L+     +  N GKQLH  + K G  L     N  +N Y +   +D A +
Sbjct: 82  PPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARR 141

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFV-------CTTIIK 153
           +FDE+   + +S+ ++     R  +++ A+H+   +  E      F        C+ +I 
Sbjct: 142 VFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLIN 201

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS 213
            L+      +   +HA V + G     F   +L+  Y+  G V  A+ +FD    KD+VS
Sbjct: 202 GLL------LGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVS 254

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           W  ++   ++N  +EE+L     M   G RPN  T+ + L +C  LE  G GK +H   L
Sbjct: 255 WNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVL 314

Query: 274 KACYDQDL----YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK 329
               + DL    +VG  L+++Y         +L F+ M ++ +  W+ MIA Y +++   
Sbjct: 315 ---MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDY 371

Query: 330 EALELF-HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL 388
           EA+ELF   + +  + PN+ T +SVL AC      +  + IHS V+K G + + +V NAL
Sbjct: 372 EAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNAL 431

Query: 389 MDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND----- 443
           MD+Y++ G IE +  +F     ++ V+WNTMI GYV  G  + A+NL   M         
Sbjct: 432 MDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRI 491

Query: 444 -------------MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALI 490
                        ++P  VT  +VL  CA  AAL  G ++H+  +K   + D+AV +AL+
Sbjct: 492 NTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALV 551

Query: 491 DMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM-----QQTNC 545
           DMYAKCG +N +R  F++M  R  ++WN +I  Y MHG   EAL LF +M          
Sbjct: 552 DMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREI 611

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAV 605
           +PN++T++ + ++ S++G++D+G +LF +M   + IEP  +HY C+V LLGR G+ +EA 
Sbjct: 612 RPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAY 671

Query: 606 KLIGEIPFQ-PSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVA 664
            LI  +P     V  W +LLGAC + +N+++G   A+++  + P+    +VLLSN+Y+ A
Sbjct: 672 NLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVASYYVLLSNIYSSA 731

Query: 665 KRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKT 724
             WD    VRK MK KGV+KEPG SW+E+   VH F  GD SHP +K +   LE L+ + 
Sbjct: 732 GLWDQAIDVRKKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRM 791

Query: 725 RDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCH 784
           +  GYVPD + VL +V ++EKE  L  HSERLA+AFGLL      +IR+ KNLR+C DCH
Sbjct: 792 KKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCH 851

Query: 785 TVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
              K IS++V REI++RD+ RFHHF++G CSCGDYW
Sbjct: 852 VATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 887



 Score =  244 bits (624), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/470 (32%), Positives = 233/470 (49%), Gaps = 22/470 (4%)

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
           S  F  A+     +   G   + F    ++K    +   ++   +HA V+K G      V
Sbjct: 63  SSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAV 122

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
             S ++ Y  CG++DAAR+VFD I  +D VSW  M+        +E ++ LF  M +   
Sbjct: 123 PNSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENV 182

Query: 243 RPNNYTITAALKSCLGL-EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            P ++T+ +   +C  L     +GK VH   L+   D   +    L+ +YAK G + +A+
Sbjct: 183 GPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAK 241

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F+    KD++ W+ +I+  +Q+DR +EAL   H M QS V PN  T ASVL AC+   
Sbjct: 242 TLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLE 301

Query: 362 LLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
           +L  GK+IH+ VL    L  N FV  AL+D+Y  C + E   ++F     +    WN MI
Sbjct: 302 MLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMI 361

Query: 421 VGYVQLGDGEKAMNLFSSMIGN-DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
            GYV+     +A+ LF  M+    + P  VT SSVL AC    +      +HS  +K  +
Sbjct: 362 AGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGF 421

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
             D  V NAL+DMY++ GRI  AR  F  M++++ VSWN MI GY + G   +ALNL + 
Sbjct: 422 EKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHD 481

Query: 540 MQQTNC------------------KPNKLTFVGVLSACSNAGLLDKGQSL 571
           MQ+                     KPN +T + VL  C+    L KG+ +
Sbjct: 482 MQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI 531



 Score =  187 bits (474), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 201/410 (49%), Gaps = 14/410 (3%)

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           + +++  +  M   G  P+N+   A LK+  G++   +GK +H    K        V   
Sbjct: 66  FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
            + +Y K GDI  A+  F+E+  +D + W+ MI    + +  + A+ LF  M   +V P 
Sbjct: 126 FVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185

Query: 347 NFTFASVLQACAAQV-LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           +FT  SV  AC+  +  L+LGKQ+H+ VL+ G D   F +NAL+ +YAK G +  +  LF
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
               +++ V+WNT+I    Q    E+A+     M+ + ++P  VT +SVL AC+    L 
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLG 304

Query: 466 PGLQVHSLTIKTRYNNDIA----VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            G ++H+  +    NND+     V  AL+DMY  C +    RL FD M +R    WNAMI
Sbjct: 305 CGKEIHAFVL---MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMI 361

Query: 522 CGYSMHGLSTEALNLFNKMQ-QTNCKPNKLTFVGVLSACSN-AGLLDKGQSLFKSMSQDY 579
            GY  +    EA+ LF +M  +    PN +T   VL AC      LDK      S    +
Sbjct: 362 AGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG--IHSCVVKW 419

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
             E        ++ +  R+G+ + A  + G +  +  ++ W  ++   VV
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVSWNTMITGYVV 468


>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr4:46542320-46539266 | 20130731
          Length = 1017

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 295/769 (38%), Positives = 447/769 (58%), Gaps = 17/769 (2%)

Query: 64   KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
            +Q+   I K G   DL+  + L+N + ++  +D A  +F +M   N ++   L  G +R 
Sbjct: 254  EQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQ 313

Query: 124  HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-------DLPHVCWTIHACVYKRGH 176
            HQ + A  V    FKE  ++      +++ LL +        +       +HA +++ G 
Sbjct: 314  HQGEEAAKV----FKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGL 369

Query: 177  -QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFC 235
              A   +G +L++ Y  C  +D A  VF  +  KD VSW  M+     N  +EE++  F 
Sbjct: 370  VDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFH 429

Query: 236  QMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSG 295
             M+  G  P+N+++ + L SC  L    +G+ +HG   K   D D+ V   LL LYA++ 
Sbjct: 430  TMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETD 489

Query: 296  DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK-EALELFHCMRQSSVVPNNFTFASVL 354
             I + Q  F +MP+ D + W+  I   A+ + S  +AL+ F  M Q+   PN  TF ++L
Sbjct: 490  SINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINIL 549

Query: 355  QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQNE 413
             A ++  +L LG QIH+ +LK  +  +  + NAL+  Y KC ++E+  I+F   S  ++E
Sbjct: 550  AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 609

Query: 414  VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSL 473
            V+WN+MI GY+  G   KAM+L   M+    +    TF++VL ACA  A L+ G++VH+ 
Sbjct: 610  VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHAC 669

Query: 474  TIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEA 533
             ++    +D+ V +AL+DMYAKCG+I+ A   F+ M  R   SWN+MI GY+ HG   +A
Sbjct: 670  AVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKA 729

Query: 534  LNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVG 593
            L +F +M+Q    P+ +TFVGVLSACS+ GL+D+G   FKSM + Y + P IEH++CMV 
Sbjct: 730  LKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVD 789

Query: 594  LLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQ--KNIDLGRFCAQHVLEMKPHDD 651
            LLGR G   +    I  +P  P++++WR +LGAC     +N +LG+  A+ ++E++P + 
Sbjct: 790  LLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNA 849

Query: 652  GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNK 711
              +VLLSNM+A    W++V   R  M++  VKK+ G SWV  +  VH F  GD +HP+ +
Sbjct: 850  VNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKE 909

Query: 712  LICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSI 771
             I   L+ L  K RDAGYVP+    L D+E + KE  L  HSE+LA+AF L R  S   I
Sbjct: 910  KIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR-KSELPI 968

Query: 772  RILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            RI+KNLR+C DCHT  K IS++V R+I++RD NRFHHF  G+CSCGDYW
Sbjct: 969  RIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1017



 Score =  249 bits (636), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 298/584 (51%), Gaps = 29/584 (4%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDC---LDDASKLFDEMPLTNTISFVTLAQG 119
           G Q+H  I K     D+   N+L++ Y   DC   +DDA ++FDE+   N++++ ++   
Sbjct: 145 GMQIHAFICKLPCVSDMILSNVLMSMYS--DCSGSIDDAHRVFDEIKFRNSVTWNSIISV 202

Query: 120 CSRSHQFDHALHVILRLFKEGHEVN-----PFVCTTIIKLLVSMDLPHVCW-TIHACVYK 173
             R      A  +   +  EG E+N       +C+ +       D   V    +   + K
Sbjct: 203 YCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEK 262

Query: 174 RGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
            G   D +VG++L++ ++  G +D A+ +F  ++ ++ V+  G++   A     EE+ ++
Sbjct: 263 SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKV 322

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGL----EAFGVGKSVHGCALKA-CYDQDLYVGTELL 288
           F +M+ +    N+ ++   L +        E    G+ VH    ++   D  + +G  L+
Sbjct: 323 FKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALV 381

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNF 348
            +Y K   I +A   F+ MP KD + W+ MI+    ++R +EA+  FH M+++ +VP+NF
Sbjct: 382 NMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 441

Query: 349 TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           +  S L +C++   L LG+QIH    K GLD +V VSNAL+ +YA+   I     +F + 
Sbjct: 442 SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 501

Query: 409 PEQNEVTWNTMIVGYVQL-GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
           PE ++V+WN+ I    +      +A+  F  M+    +P  VTF ++L A + F+ L  G
Sbjct: 502 PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 561

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM-DKREEVSWNAMICGYSM 526
            Q+H+L +K    +D A+ NAL+  Y KC ++ D  + F +M ++R+EVSWN+MI GY  
Sbjct: 562 HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 621

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
            G+  +A++L   M Q   K +  TF  VLSAC++   L++G  +         +  C+E
Sbjct: 622 SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACA-----VRACLE 676

Query: 587 H----YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
                 + +V +  + GK D A +    +P + ++  W +++  
Sbjct: 677 SDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISG 719



 Score =  215 bits (547), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 271/526 (51%), Gaps = 24/526 (4%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
            LH  + K G   D+F  N L+N YV+   L  A KLFDEMP  N +S+  L  G +++ 
Sbjct: 44  HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 103

Query: 125 QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV--CWTIHACVYKRGHQADAFV 182
             D A  +   +   G   N F   + ++         +     IHA + K    +D  +
Sbjct: 104 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 163

Query: 183 GTSLIDAYSVC-GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
              L+  YS C G++D A +VFD I  ++ V+W  ++  Y        + +LF  M++ G
Sbjct: 164 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG 223

Query: 242 ----YRPNNYTITAALKSCLGLEAFGVG--KSVHGCALKACYDQDLYVGTELLELYAKSG 295
                RPN YT+ + + +   L   G+   + +     K+ + +DLYVG+ L+  +A+ G
Sbjct: 224 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 283

Query: 296 DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR-------QSSVV-PNN 347
            +  A++ F++M  ++ +  + ++   A+  + +EA ++F  M+       +S VV  + 
Sbjct: 284 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLST 343

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVLKVGL-DSNVFVSNALMDVYAKCGEIENSMILFM 406
           FT  S L+    +     G+++H+ + + GL D+ + + NAL+++Y KC  I+N+  +F 
Sbjct: 344 FTEFSNLKEGKRK-----GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQ 398

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
             P ++ V+WN+MI G       E+A++ F +M  N M P+  +  S L +C+    L  
Sbjct: 399 LMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTL 458

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G Q+H    K   + D++V+NAL+ +YA+   IN+ +  F +M + ++VSWN+ I   + 
Sbjct: 459 GRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAK 518

Query: 527 HGLST-EALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           +  S  +AL  F +M Q   +PN++TF+ +L+A S+  +L  G  +
Sbjct: 519 YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQI 564



 Score =  185 bits (469), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 243/477 (50%), Gaps = 23/477 (4%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H  +YK G   D F   +LI+ Y   GN+ +AR++FD +  K++VSW+ ++  Y +N  
Sbjct: 45  LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 104

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSC--LGLEAFGVGKSVHGCALKACYDQDLYVG 284
            +E+  LF  +   G  PN++ + +AL++C   G     +G  +H    K     D+ + 
Sbjct: 105 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 164

Query: 285 TELLELYAK-SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
             L+ +Y+  SG I DA   F+E+  ++ + W+ +I+ Y +   +  A +LF  M+   V
Sbjct: 165 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 224

Query: 344 ----VPNNFTFAS-VLQACA-AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
                PN +T  S V  AC+ A   L+L +Q+ + + K G   +++V +AL++ +A+ G 
Sbjct: 225 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 284

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           ++ + ++F +  ++N VT N ++VG  +   GE+A  +F  M   D+   E+   S++  
Sbjct: 285 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM--KDL--VEINSESLVVL 340

Query: 458 CAGFAALD-------PGLQVHSLTIKTRY-NNDIAVANALIDMYAKCGRINDARLTFDKM 509
            + F            G +VH+   ++   +  I++ NAL++MY KC  I++A   F  M
Sbjct: 341 LSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM 400

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
             ++ VSWN+MI G   +    EA++ F+ M++    P+  + +  LS+CS+ G L  G+
Sbjct: 401 PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 460

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            +       + ++  +     ++ L       +E  K+  ++P    V  W + +GA
Sbjct: 461 QIHGE-GFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV-SWNSFIGA 515



 Score =  151 bits (381), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 4/362 (1%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G+Q+H +  K G  LD+   N LL  Y + D +++  K+F +MP  + +S+ +     ++
Sbjct: 459 GRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAK 518

Query: 123 SH-QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
                  AL   L + + G   N      I+  + S  +  +   IHA + K     D  
Sbjct: 519 YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNA 578

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIF-CKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
           +  +L+  Y  C  ++    +F  +   +D VSW  M+  Y  +    +++ L   M   
Sbjct: 579 IENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQR 638

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
           G + + +T    L +C  +     G  VH CA++AC + D+ VG+ L+++YAK G I  A
Sbjct: 639 GQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYA 698

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
             FFE MP +++  W+ MI+ YA+    ++AL++F  M+Q    P++ TF  VL AC+  
Sbjct: 699 SRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHV 758

Query: 361 VLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNT 418
            L+  G +   ++ +V GL   +   + ++D+  + G+++         P + N + W T
Sbjct: 759 GLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRT 818

Query: 419 MI 420
           ++
Sbjct: 819 VL 820


>Medtr8g086560.1 | PPR containing plant protein | HC |
           chr8:35911406-35914374 | 20130731
          Length = 908

 Score =  529 bits (1363), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 272/777 (35%), Positives = 448/777 (57%), Gaps = 1/777 (0%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           L  +SY ++LQ   + +    GK++H  I+  G  +D      L+  YV    L    K+
Sbjct: 92  LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKI 151

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD++       +  L    ++   F  ++ +  ++ K G   N +  T ++K   ++   
Sbjct: 152 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 211

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
             C  +H  V K G  ++  V  SLI AY   G V++A  +FD +   D+VSW  M+   
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 271

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
             N F    L++F QM ++G   +  T+ + L +C  +    +G+++HG  +KAC+ +++
Sbjct: 272 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEV 331

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
                LL++Y+K G++  A   F +M    ++ W+ +IA Y +     +A+ LF  M+  
Sbjct: 332 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSK 391

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            V P+ +T  S++ ACA    L  G+ +HS V+K G+ SN+ V+NAL+++YAKCG +E +
Sbjct: 392 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 451

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
            ++F + P ++ V+WNTMI GY Q     +A+ LF  M     +P ++T + VL ACAG 
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGL 510

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
           AALD G ++H   ++  Y +D+ VA AL+DMYAKCG +  A+L FD + K++ +SW  MI
Sbjct: 511 AALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 570

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY MHG   EA++ FN+M+    +P++ +F  +L+ACS++GLL++G   F SM  +  +
Sbjct: 571 AGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGV 630

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           EP +EHY C+V LL R+G   +A K I  +P +P   +W  LL  C +  ++ L    A+
Sbjct: 631 EPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAE 690

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
           H+ E++P +   +V+L+N+YA A++W+ V  +RK M+++G K+ PG SW+E  G  + F 
Sbjct: 691 HIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFV 750

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
            G++ HP  K I  +L  L  + ++  Y      VL++ +D EKE     HSE+ A+AFG
Sbjct: 751 AGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFG 810

Query: 762 LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGD 818
           +L +P   ++R+ KN R+C DCH + K +S+  + EIV+RD NRFHHF+ G+CSC D
Sbjct: 811 ILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867


>Medtr4g086490.1 | PPR containing plant protein | HC |
            chr4:33903624-33910415 | 20130731
          Length = 1183

 Score =  528 bits (1359), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 272/777 (35%), Positives = 447/777 (57%), Gaps = 1/777 (0%)

Query: 42   LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
            L  +SY ++LQ   + +    GK++H  I+  G  +D      L+  YV    L    K+
Sbjct: 367  LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKI 426

Query: 102  FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
            FD++       +  L    ++   F  ++ +  ++ K G   N +  T ++K   ++   
Sbjct: 427  FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 486

Query: 162  HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
              C  +H  V K G  ++  V  SLI AY   G V++A  +FD +   D+VSW  M+   
Sbjct: 487  KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 546

Query: 222  AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
              N F    L++F QM ++G   +  T+ + L +   +    +G+++HG  +KAC+ +++
Sbjct: 547  VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEV 606

Query: 282  YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
                 LL++Y+K G++  A   F +M    ++ W+  IA Y +     +A+ LF  M+  
Sbjct: 607  VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSK 666

Query: 342  SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
             V P+ +T  S++ ACA    L  G+ +HS V+K G+ SN+ V+NAL+++YAKCG +E +
Sbjct: 667  GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 726

Query: 402  MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             ++F + P ++ V+WNTMI GY Q     +A+ LF  M     +P ++T + VL ACAG 
Sbjct: 727  RLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGL 785

Query: 462  AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            AALD G ++H   ++  Y +D+ VA AL+DMYAKCG +  A+L FD + K++ +SW  MI
Sbjct: 786  AALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 845

Query: 522  CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             GY MHG   EA++ FN+M+    +P++ +F  +L+ACS++GLL++G   F SM  +  +
Sbjct: 846  AGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGV 905

Query: 582  EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
            EP +EHY C+V LL R+G   +A K I  +P +P   +W  LL  C +  ++ L    A+
Sbjct: 906  EPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAE 965

Query: 642  HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
            H+ E++P +   +V+L+N+YA A++W+ V  +RK M+++G K+ PG SW+E  G  + F 
Sbjct: 966  HIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFV 1025

Query: 702  VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
             G++ HP  K I  +L  L  + ++  Y      VL++ +D EKE     HSE+ A+AFG
Sbjct: 1026 AGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFG 1085

Query: 762  LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGD 818
            +L +P   ++R+ KN R+C DCH + K +S+  +REIV+RD NRFHHF+ G+CSC D
Sbjct: 1086 ILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142


>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:21515828-21518970 | 20130731
          Length = 616

 Score =  525 bits (1353), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/591 (43%), Positives = 379/591 (64%), Gaps = 2/591 (0%)

Query: 232 QLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELY 291
           Q   QM + G+        A L  C+   AF  G+ VH   +K  Y   +++ T L+ LY
Sbjct: 26  QPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLY 85

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFA 351
            K   + DA   F+EMP+++V+ W+ MI+ Y+Q   + +AL LF  M +S   PN FTFA
Sbjct: 86  TKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFA 145

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
           +VL +C + +  ILG+QIHS ++K+  + +VFV ++L+D+YAK G+I  +  +F   PE+
Sbjct: 146 TVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPER 205

Query: 412 NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVH 471
           + V+   +I GY QLG  E+A+ LF  + G  M+   VT++ VL A +G AALD G QVH
Sbjct: 206 DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVH 265

Query: 472 SLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLST 531
           +  +++   + + + N+LIDMY+KCG +  +R  FD M +R  +SWNAM+ GYS HG   
Sbjct: 266 NHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGR 325

Query: 532 EALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ-DYNIEPCIEHYT 589
           E L LF  M ++T  KP+ +T + VLS CS+ GL DKG ++F  MS     +EP +EHY 
Sbjct: 326 EVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYG 385

Query: 590 CMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPH 649
           C+V LLGR G+ +EA + I ++PF+P+  +W +LLGAC V  N+D+G F  Q +LE++P 
Sbjct: 386 CVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPG 445

Query: 650 DDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPD 709
           + G +V+LSN+YA A RW++V+S+R  M +K V KEPG S +E   V+H F   D SHP 
Sbjct: 446 NAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPR 505

Query: 710 NKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTC 769
            + IC  ++ L+   ++ GYVPD + VL DV++++KE+ L  HSE+LAL+FGL+  P++ 
Sbjct: 506 REEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASV 565

Query: 770 SIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            IR++KNLRICVDCH   K IS+V  RE+ +RD NRFH    G CSC DYW
Sbjct: 566 PIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 616



 Score =  208 bits (530), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 198/365 (54%), Gaps = 4/365 (1%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HA + K  +    F+ T LI  Y+ C ++  A  VFD +  +++VSWT M+  Y++  +
Sbjct: 62  VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGY 121

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
             ++L LF QM   G  PN +T    L SC     F +G+ +H   +K  Y+  ++VG+ 
Sbjct: 122 ASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSS 181

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           LL++YAK G I +A+  FE +P++DV+  + +I+ YAQ    +EALELF  ++   +  N
Sbjct: 182 LLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSN 241

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
             T+  VL A +    L LGKQ+H++VL+  + S V + N+L+D+Y+KCG +  S  +F 
Sbjct: 242 YVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFD 301

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI-GNDMQPTEVTFSSVLRACAGFAALD 465
              E+  ++WN M+VGY + G+G + + LF+ M     ++P  VT  +VL  C+     D
Sbjct: 302 TMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLED 361

Query: 466 PGLQVHS--LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMIC 522
            GL + +   + K      +     ++D+  + GR+ +A     KM      + W +++ 
Sbjct: 362 KGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLG 421

Query: 523 GYSMH 527
              +H
Sbjct: 422 ACRVH 426



 Score =  171 bits (433), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 195/379 (51%), Gaps = 4/379 (1%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +Y A+L + +  R    G+++H  ++K      +F    L+  Y + D L DA  +FDEM
Sbjct: 42  NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEM 101

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
           P  N +S+  +    S+      AL++ L++ + G E N F   T++    S     +  
Sbjct: 102 PERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGR 161

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            IH+ + K  ++   FVG+SL+D Y+  G +  AR VF+ +  +D+VS T ++  YA+  
Sbjct: 162 QIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLG 221

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
             EE+L+LF +++  G + N  T T  L +  GL A  +GK VH   L++     + +  
Sbjct: 222 LDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQN 281

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS-VV 344
            L+++Y+K G++  ++  F+ M ++ VI W+ M+  Y++    +E L+LF  MR+ + V 
Sbjct: 282 SLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVK 341

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVL--KVGLDSNVFVSNALMDVYAKCGEIENSM 402
           P++ T  +VL  C+   L   G  I +++   K+ ++  +     ++D+  + G +E + 
Sbjct: 342 PDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAF 401

Query: 403 ILFMESP-EQNEVTWNTMI 420
               + P E     W +++
Sbjct: 402 EFIKKMPFEPTAAIWGSLL 420


>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:54376407-54379381 | 20130731
          Length = 783

 Score =  523 bits (1347), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 284/756 (37%), Positives = 425/756 (56%), Gaps = 2/756 (0%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           Q H   +  G   DL     L      F     A  LF  +P  +   F  L +G S + 
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 125 QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
               ++ +   L +    ++P   T    +    +  H+   +HA     G+ ++ FVG+
Sbjct: 90  SPSSSISLYTHL-RRNTNLSPDNFTYAFAVAACSNDKHLML-LHAHSIIDGYGSNVFVGS 147

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           +L+D Y     V  AR+VFDG+  +D V W  M+    +NC +++S+QLF +M   G R 
Sbjct: 148 ALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRV 207

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFF 304
           ++ T+TA L +   L+   VG  +   ALK  +    YV T L+ LY+K GD+  A+L F
Sbjct: 208 DSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLF 267

Query: 305 EEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLI 364
             + + D+I ++ MI+ +  +  ++ +++LF  +  S    ++ T   ++   +    L 
Sbjct: 268 RRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLH 327

Query: 365 LGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYV 424
           L   IH   +K G+  N  VS A   +Y K  EI+ +  LF ESPE+  V WN MI GY 
Sbjct: 328 LACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYT 387

Query: 425 QLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
           Q G  E A++LF  M+  +  P  VT +++L ACA   +L  G  VH L        +I 
Sbjct: 388 QNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIY 447

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
           V+ AL+DMYAKCG I++A   FD M ++  V+WN MI GY +HG   EAL L+N+M    
Sbjct: 448 VSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG 507

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
             P+ +TF+ VL ACS+AGL+ +G+ +F +M   Y IEP IEHY CMV +LGR G+ ++A
Sbjct: 508 YNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKA 567

Query: 605 VKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVA 664
           ++ I ++P +P   VW  LLGAC++ K+ D+ R  ++ + E+ P   G +VLLSN+Y+V 
Sbjct: 568 LEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVE 627

Query: 665 KRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKT 724
           + +   AS+R+ +K++ + K PG + +E  G  H F  GD SH     I A LE L  K 
Sbjct: 628 RNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKM 687

Query: 725 RDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCH 784
           R+ GY  +    L DVE++EKE  + VHSE+LA+AFGL+       IRI+KNLR+C+DCH
Sbjct: 688 REMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCH 747

Query: 785 TVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           T  K IS++ +R IVVRD NRFHHF+ G+CSCGDYW
Sbjct: 748 TATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783


>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:10600555-10597860 | 20130731
          Length = 839

 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/786 (36%), Positives = 456/786 (58%), Gaps = 19/786 (2%)

Query: 50  LLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLT- 108
           LL+Q I+ ++ + GK LH  +     PLD    N L+  Y + +    A  +F  M  + 
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 109 -NTISFVTLAQGCSRSHQFDHALHVILRLF-KEGHEVNPFVCTTIIKLLVSMDLPHVCWT 166
            + +S+ ++    + +     A+ +  +L  ++G   N +  T +I+  +          
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177

Query: 167 IHACVYKRGH-QADAFVGTSLIDAY---SVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   V K G+  +   VG  LID +       ++++AR+VFD +  K++V+WT M+   A
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237

Query: 223 ENCFYEESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           +  + +E++ LF +M V  GY P+ +T+T  +  C  ++   +GK +H   +++    DL
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSD--RSKEALELFHCMR 339
            VG  L+++YAK G + +A+  F+ M + +V+ W+ ++  Y +      +EA+ +F  M 
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357

Query: 340 -QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
            Q  V PN FTF+ VL+ACA+      G+Q+H   +K+GL +   V N L+ VYAK G +
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRM 417

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGD----GEKAMNLFSSMIGNDMQPTEVTFSSV 454
           E++   F    E+N V+    +V    + D     E+ ++     +G+ +  +  T++S+
Sbjct: 418 ESARKCFDVLFEKNLVS--ETVVDDTNVKDFNLNSEQDLDREVEYVGSGV--SSFTYASL 473

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           L   A    +  G Q+H++ +K  +  D++V NALI MY+KCG    A   F+ M+    
Sbjct: 474 LSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNV 533

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           ++W ++I G++ HG +++AL LF  M +T  KPN +T++ VLSACS+ GL+D+    F S
Sbjct: 534 ITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTS 593

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
           M  ++ I P +EHY CMV LLGR G   EA++ I  +PF    +VWR  LG+C V +N  
Sbjct: 594 MRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTK 653

Query: 635 LGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
           LG   A+ +LE +PHD  T++LLSN+YA   RW++VA++RKNMK+K + KE G SW+E +
Sbjct: 654 LGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVE 713

Query: 695 GVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSE 754
             VH F VGDT HP  + I   L+ L  K ++ GYVP+ + VL DVED++KE++L+ HSE
Sbjct: 714 NQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSE 773

Query: 755 RLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVC 814
           +LA+AF L+  P+   IR+ KNLR+C DCHT IK IS V  REIVVRD NRFHH + G C
Sbjct: 774 KLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTC 833

Query: 815 SCGDYW 820
           SC DYW
Sbjct: 834 SCNDYW 839



 Score =  162 bits (410), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 13/340 (3%)

Query: 245 NNYTITAAL--KSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
           NN  IT++L  K C+  +   +GK +H     +    D  +   L+ LY+KS D + A  
Sbjct: 49  NNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFS 108

Query: 303 FFEEM--PKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAA 359
            F+ M   K+DV+ +S +I+ +A +    +A+E+F   + Q  V PN + F +V++AC  
Sbjct: 109 IFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLK 168

Query: 360 QVLLILGKQIHSNVLKVG-LDSNVFVSNALMDVYAK---CGEIENSMILFMESPEQNEVT 415
                 G  +   VLK G  DS+V V   L+D++ K     ++E++  +F +  E+N VT
Sbjct: 169 GGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVT 228

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           W  MI    Q G  ++A++LF  M + +   P   T + ++  CA    L  G ++HS  
Sbjct: 229 WTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWV 288

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY--SMHGLSTE 532
           I++    D+ V  +L+DMYAKCG + +AR  FD M +   +SW A++ GY     G   E
Sbjct: 289 IRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYERE 348

Query: 533 ALNLF-NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           A+ +F N + Q    PN  TF GVL AC++    D G+ +
Sbjct: 349 AMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQV 388



 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  +   L+    + +  + GK+LH  +++ G  LDL     L++ Y +   + +A K+F
Sbjct: 261 DRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVF 320

Query: 103 DEMPLTNTISFVTLAQGCSR---SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           D M   N +S+  L  G  R    ++ +        L + G   N F  + ++K   S+ 
Sbjct: 321 DGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLP 380

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
                  +H    K G  A   VG  L+  Y+  G +++AR+ FD +F K++VS T +  
Sbjct: 381 DFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDD 440

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
              ++        L  ++  +G   +++T  + L     +   G G+ +H   +K  +  
Sbjct: 441 TNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRT 500

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           DL V   L+ +Y+K G+   A   F +M   +VI W+ +I  +A+   + +ALELF+ M 
Sbjct: 501 DLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNML 560

Query: 340 QSSVVPNNFTFASVLQACA 358
           ++ V PN+ T+ +VL AC+
Sbjct: 561 ETGVKPNDVTYIAVLSACS 579


>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38095334-38099255 | 20130731
          Length = 653

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/601 (42%), Positives = 380/601 (63%), Gaps = 7/601 (1%)

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           CY  +     ++Q+   M   G   +    +  +K CL  +A   GK VH       Y  
Sbjct: 60  CYNRDL--PRAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRP 117

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
             ++   LL +Y K   + +AQ+ F++MP+++V+ W+ MI+ Y+ +  +  A++L   M 
Sbjct: 118 KTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMI 177

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
           +  V+PN +TF+SVL+AC     L   KQ+HS +LK GL+S+VFV +AL+D Y+K GE+ 
Sbjct: 178 RDGVMPNMYTFSSVLRACERLCDL---KQVHSGILKAGLESDVFVRSALIDAYSKLGELL 234

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
            ++ +F E    + V WN++I  + Q  DG++A+ L+ SM        + T +SVLRAC 
Sbjct: 235 EAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACT 294

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
           G + L+ G QVH   +K  ++ D+ + NAL+DMY KCG + DA+  F +M  ++ +SW+ 
Sbjct: 295 GSSLLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWST 352

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           MI G + +G S EALNLF+ M+ +  +PN +T +GVL ACS+AGL+++G   F+SM   Y
Sbjct: 353 MISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLY 412

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFC 639
            I+P  EHY+C++ LLGR GK DE VKLI E+  +P V+ WR LL AC  Q+N+DL  + 
Sbjct: 413 GIDPGREHYSCLLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRNVDLATYA 472

Query: 640 AQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHY 699
           A+ +L++   D G +VLLSN+YA +KRWD+VA VR+ M  +G++KEPG SW+E    +H 
Sbjct: 473 AKEILKLDQQDAGAYVLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWIEVNNQIHA 532

Query: 700 FSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALA 759
           F VGD SHP    I   L+   +K  DAGYVPD N +L D+E ++ E  L  HSE+LA+ 
Sbjct: 533 FIVGDKSHPQIDEINRKLDEYIRKLTDAGYVPDTNFMLKDLEGEQSEYSLRHHSEKLAIV 592

Query: 760 FGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDY 819
           FG++  P   +IRI KNL+IC DCH   KLI+++ QR IV+RD  R+HHFQ GVCSCGDY
Sbjct: 593 FGIISFPREKTIRIWKNLKICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDY 652

Query: 820 W 820
           W
Sbjct: 653 W 653



 Score =  193 bits (491), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 205/381 (53%), Gaps = 9/381 (2%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+ +Y+ L++  + ++    GK++H  I   G     F  N LLN YV+ + L++A  +F
Sbjct: 83  DAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVF 142

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLP 161
           D+MP  N +S+ T+    S +   D A+ +++ + ++G   N +  +++++    + DL 
Sbjct: 143 DKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDLK 202

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            V    H+ + K G ++D FV ++LIDAYS  G +  A  VF  +   D V W  ++  +
Sbjct: 203 QV----HSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAF 258

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A++   +E+L L+  MR  G+  +  T+T+ L++C G     +G+ VH   LK  +DQDL
Sbjct: 259 AQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLK--FDQDL 316

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            +   LL++Y K G + DA+  F  M  KDVI WS MI+  AQ+  S EAL LF  M+ S
Sbjct: 317 ILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVS 376

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIEN 400
              PN  T   VL AC+   L+  G     ++  + G+D      + L+D+  + G+++ 
Sbjct: 377 GPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDE 436

Query: 401 SMILFME-SPEQNEVTWNTMI 420
            + L  E + E + VTW T++
Sbjct: 437 MVKLIHEMTCEPDVVTWRTLL 457


>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:45554142-45556499 | 20130731
          Length = 785

 Score =  520 bits (1339), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/739 (36%), Positives = 432/739 (58%), Gaps = 3/739 (0%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           L  +++  + +  A  +FD++P  + + +  + +  + S  F  ++++ L + + G    
Sbjct: 47  LARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPT 106

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD 204
            F    ++K   S+    +   IH   +  G   D +V T+L+  Y+ CG++  A+ +F+
Sbjct: 107 NFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFN 166

Query: 205 GIFC--KDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
            I    +D+V+W  M+  ++ +  + +++    QM+  G  PN+ T+ + L +     A 
Sbjct: 167 SISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANAL 226

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
             GK++H   ++  +  ++ + T LL++YAK   +  A+  F  + KK+ + WS MI  Y
Sbjct: 227 HQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGY 286

Query: 323 AQSDRSKEALELFHCMR-QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
              D   +AL L+  M     + P   T A++L+ACA    L  GK++H +++K G+D +
Sbjct: 287 VLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLD 346

Query: 382 VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
             V N+L+ +YAKCG ++N++    E   ++ V+++ +I G VQ G  EKA+ +F  M  
Sbjct: 347 TTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS 406

Query: 442 NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIND 501
           + + P   T  ++L AC+  AAL  G   H  T+   + ND ++ NA+IDMY+KCG+I  
Sbjct: 407 SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITI 466

Query: 502 ARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           +R  FD+M  R+ +SWN MI GY +HGL  EAL+LF ++Q    KP+ +T + VLSACS+
Sbjct: 467 SREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH 526

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
           +GL+ +G+  F SMSQ++NI+P + HY CMV LL R G  DEA   I  +PF P+V +W 
Sbjct: 527 SGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWG 586

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           ALL AC   KNI++G   ++ +  + P   G  VL+SN+Y+   RWD+ A +R   +  G
Sbjct: 587 ALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHG 646

Query: 682 VKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVE 741
            KK PG SWVE  GV+H F  G  SHP +  I   L+ L  + +  GY  D + VL DVE
Sbjct: 647 YKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVE 706

Query: 742 DDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVR 801
           ++EKE+ L  HSE++A+AFG+L    +  I + KNLRICVDCH+ IK I+ + +REI VR
Sbjct: 707 EEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVR 766

Query: 802 DINRFHHFQHGVCSCGDYW 820
           D +RFHHF+ G+C+C D+W
Sbjct: 767 DASRFHHFKDGICNCQDFW 785



 Score =  171 bits (432), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 225/474 (47%), Gaps = 13/474 (2%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G+ +H      G  +DL+    LL+ Y +   L  A  LF+ +   +       A   + 
Sbjct: 126 GRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAF 185

Query: 123 SHQFDHA--LHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
           S    HA  +H + ++ + G   N     +I+  +   +  H    IHA   +     + 
Sbjct: 186 SFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNV 245

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR-V 239
            + T+L+D Y+ C  +  AR++F+ +  K+ V W+ M+G Y  +    ++L L+  M  +
Sbjct: 246 VLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCI 305

Query: 240 MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
            G  P   T+   L++C  L     GK +H   +K+  D D  VG  L+ +YAK G + +
Sbjct: 306 YGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDN 365

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A  F +EM  KD + +S +I+   Q+  +++AL +F  M+ S + P   T  ++L AC+ 
Sbjct: 366 AVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSH 425

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
              L  G   H   +  G  ++  + NA++D+Y+KCG+I  S  +F     ++ ++WNTM
Sbjct: 426 LAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTM 485

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS-----LT 474
           I+GY   G   +A++LF  +    ++P +VT  +VL AC+    +  G    S       
Sbjct: 486 IIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFN 545

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
           IK R  + I     ++D+ A+ G +++A     +M     V  W A++     H
Sbjct: 546 IKPRMAHYI----CMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTH 595



 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 181/349 (51%), Gaps = 7/349 (2%)

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
            T+L   +    +I  A+  F+++PK  V+ W++MI  YA S   ++++ L+  M Q  V
Sbjct: 44  ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            P NFTF  +L+AC++   L LG+ IH++   +GL  +++VS AL+ +YAKCG +  +  
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163

Query: 404 LFMESPEQNE--VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
           LF     Q+   V WN MI  +       + ++  + M    + P   T  S+L      
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            AL  G  +H+  I+  + +++ +  AL+DMYAKC  +  AR  F+ ++K+ +V W+AMI
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283

Query: 522 CGYSMHGLSTEALNLFNKMQ-QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQD-Y 579
            GY +H   ++AL L++ M       P   T   +L AC+    L +G+ L   M +   
Sbjct: 284 GGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGM 343

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
           +++  +     ++ +  + G  D AV  + E+  + +V  + A++  CV
Sbjct: 344 DLDTTVG--NSLISMYAKCGIMDNAVGFLDEMIAKDTV-SYSAIISGCV 389



 Score =  109 bits (272), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 22/287 (7%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           + A +L+   Q      GK+LHC ++K G  LD    N L++ Y +   +D+A    DEM
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL-----LVSMDL 160
              +T+S+  +  GC ++   + AL +  ++   G  + P++ T I  L     L ++  
Sbjct: 374 IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG--IAPYLETMIALLPACSHLAALQH 431

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
              C   H     RG   D  +  ++ID YS CG +  +R++FD +  +D++SW  M+  
Sbjct: 432 GTCC---HGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIG 488

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y  +    E+L LF +++ +G +P++ T+ A L +C        G    G    +   Q+
Sbjct: 489 YGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSAC-----SHSGLVTEGKYWFSSMSQN 543

Query: 281 LYVGTE------LLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
             +         +++L A++G++ +A  F + MP   +V  W  ++A
Sbjct: 544 FNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLA 590



 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
           R ++  A A  L   +     I  AR  FD++ K   V WN MI  Y+  G   +++ L+
Sbjct: 36  RVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLY 95

Query: 538 NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGR 597
             M Q    P   TF  +L ACS+   L  G+ L  + +    +   +   T ++ +  +
Sbjct: 96  LHMLQLGVTPTNFTFPFLLKACSSLQALQLGR-LIHTHAHILGLSMDLYVSTALLHMYAK 154

Query: 598 LGKFDEAVKLIGEIPFQP-SVMVWRALLGA 626
            G   +A  L   I  Q   ++ W A++ A
Sbjct: 155 CGHLYQAQTLFNSISHQDRDIVAWNAMIAA 184


>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:33294066-33291364 | 20130731
          Length = 814

 Score =  520 bits (1338), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/758 (37%), Positives = 433/758 (57%), Gaps = 1/758 (0%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K +H  I++  A    F    L+  Y     L+ A K+FD+ P   TI    +  G  ++
Sbjct: 57  KSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKN 116

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
            ++     +   +     E+N + C   +K    +    V   +     ++G      VG
Sbjct: 117 MEYKEVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVG 176

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           +S+I+    CGN++ AR VFDG+  +D+V W  ++G Y +    +E +QLF +M   G R
Sbjct: 177 SSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIR 236

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P++ T+ + LK+C       +G  VH   L      D++V T L+++Y   GD   A L 
Sbjct: 237 PSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLV 296

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F  M  + +I W+ MI+   Q+    E+  LFH + QS    ++ T  S+++ C+    L
Sbjct: 297 FNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDL 356

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
             GK +H+ +++ GL+SN+ +S A++D+Y+KCG I+ +  +F    ++N +TW  M+VG 
Sbjct: 357 ENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGL 416

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            Q G  E A+ LF  M   ++    VT  S++  CA   +L  G  VH   I+  Y  + 
Sbjct: 417 SQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNA 476

Query: 484 AVANALIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
              +ALIDMYAKCG+I+ A +L ++    ++ +  N+MI GY MHG   +AL ++++M  
Sbjct: 477 VNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMID 536

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
              KPN+ TFV +L+ACS++GL+++G++LF  M + +NI+P  +HY C V LL R G  +
Sbjct: 537 ERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNIKPSDKHYACFVDLLSRAGYLE 596

Query: 603 EAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYA 662
           EA  L+ +IP +PS+ V  ALLG C + KNI++G   A  ++ +   + G +V+LSN+Y+
Sbjct: 597 EAYALVKQIPVEPSIDVLEALLGGCRIHKNINMGIQIADRLISLDYLNTGIYVMLSNIYS 656

Query: 663 VAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNK 722
            A+RW++V  +R  M+++G+KK P  S  E    V  F  GD SHP  + I  +LE L  
Sbjct: 657 EARRWESVNYIRGLMRKRGLKKTPAFSLTEVGNQVFTFFAGDDSHPGWENIKQLLENLRL 716

Query: 723 KTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVD 782
           +   +GYV D + VL DV +  K + LW HSERLA+AFGLL  P    IRI KNLRICVD
Sbjct: 717 EVEASGYVADTSCVLRDVNETMKVQLLWGHSERLAIAFGLLNTPYGSLIRITKNLRICVD 776

Query: 783 CHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           CHTV K IS++V+REI+VRD NRFHHF +G CSC DYW
Sbjct: 777 CHTVTKYISKIVKREIIVRDANRFHHFVNGECSCNDYW 814



 Score =  105 bits (263), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 17/347 (4%)

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           F+S+L+  +  ++ +  K IH+ +++    +  F++  L+ +Y+  G +  +  +F + P
Sbjct: 42  FSSLLREFSNTLIDV--KSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQCP 99

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
            +  +  N M+ G+++  + ++   LF  M   D++    T    L+AC      + G++
Sbjct: 100 HRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGME 159

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGL 529
           +  + ++  ++    V +++I+   KCG +NDAR+ FD M +R+ V WN++I GY   GL
Sbjct: 160 LVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGL 219

Query: 530 STEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQS-----LFKSMSQDYNIEPC 584
             E + LF +M     +P+ +T   +L AC  +G    G       L   M  D  +   
Sbjct: 220 LKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTS 279

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
           +    C VG         E+  L+       S++ W A++  C VQ  +    F   H L
Sbjct: 280 LVDMYCNVG-------DTESAFLVFNRMCSRSLISWNAMISGC-VQNGMVPESFSLFHKL 331

Query: 645 EMK--PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
                  D GT V L    +     +N   +   + RKG++    LS
Sbjct: 332 VQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLS 378


>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50133605-50130067 | 20130731
          Length = 1017

 Score =  516 bits (1328), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/761 (36%), Positives = 444/761 (58%), Gaps = 1/761 (0%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           ++  +L+     +  N GK++H   +  G   D F  N L+  Y +     D+ KLF  +
Sbjct: 85  TFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMI 144

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
                +S+  L     +S      + +  R+ +     N +  + I+     +    +  
Sbjct: 145 LEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGR 204

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           T+H  + K GH  D F   +L+D Y+  G ++ A  VF  +   D VSW  ++     + 
Sbjct: 205 TVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHE 264

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
           + + +L L  +M+  G  PN +T+++ALK+C  +    +G+ +H C++K   D DL+V  
Sbjct: 265 YNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAV 324

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKD-VIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
            L++LY+K   + DA+  ++ MP KD +I  + +I+ Y+Q    ++A+ LF  +   ++ 
Sbjct: 325 GLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENID 384

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
            N  T ++VL++ A+   + + KQIH+  +K G+ S+ +V N+L+D Y KC  I+ +  +
Sbjct: 385 FNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKI 444

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F E   ++ V + +MI  Y Q GD E+A+ L+  M   D++P     SS+L ACA  +A 
Sbjct: 445 FEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAY 504

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
           + G Q+H   IK  + +DI  +N+L++MYAKCG I DA   F ++ +R  VSW+AMI G 
Sbjct: 505 EQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGL 564

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC 584
           + HG   EAL +FN+M +    PN +T V VL AC++AGL+++G+  F++M + + I+P 
Sbjct: 565 AQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPT 624

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
            EH+ CM+ LLGR GK +EAV+L+  IPF+    VW ALLGA  + KN++LG   A+ + 
Sbjct: 625 QEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLF 684

Query: 645 EMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGD 704
            ++P   GT VLL+N+YA A  W+NVA+VRK M+   VKKEPG+SW+E +  +H F VGD
Sbjct: 685 TLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIVGD 744

Query: 705 TSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLR 764
            +H  +  I A L+ L++    AGY P     + +VE  EKE+ L+ HSE+LA+AFGL+ 
Sbjct: 745 RNHSRSDEIFAKLDELSELLSKAGYSPIIETDIHNVERSEKEKLLYHHSEKLAVAFGLIV 804

Query: 765 IPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINR 805
            P    IR+ KNLR+CVDCHT +KL+S++V R+IV+ +I +
Sbjct: 805 TPPGAPIRVKKNLRVCVDCHTFLKLVSKLVSRQIVIEEIGK 845



 Score =  279 bits (714), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 171/564 (30%), Positives = 293/564 (51%), Gaps = 4/564 (0%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNT-ISFVTLAQGCSRS 123
           +LH  ++K G        N LL FY        A  L D+     T +S+  L     ++
Sbjct: 2   ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
                AL     +   G + N F   T++K        ++   +HA     G ++DAFV 
Sbjct: 62  GFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVS 121

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            +L+  Y+ CG    ++++F  I    +VSW  +  C+ ++ F  E++ LF +M     R
Sbjct: 122 NTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVR 181

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           PN Y+++  L +C GL   G+G++VHG  +K  +  D +    L+++YAK+G I DA   
Sbjct: 182 PNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDV 241

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F EM   D + W+ +IA     + +  AL L + M++S   PN FT +S L+ACAA  L 
Sbjct: 242 FREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLK 301

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNE-VTWNTMIVG 422
            LG+QIHS  +K+  DS++FV+  L+D+Y+KC  ++++   +   P ++  +  N +I G
Sbjct: 302 DLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISG 361

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
           Y Q GD E+A++LF  +   ++   + T S+VL++ A    +    Q+H+L+IK    +D
Sbjct: 362 YSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSD 421

Query: 483 IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
             V N+L+D Y KC  I++A   F++    + V++ +MI  YS HG + EAL L+ +MQ 
Sbjct: 422 FYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQV 481

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
            + KP+      +L+AC+N    ++G+ L     + +     I     +V +  + G  +
Sbjct: 482 ADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIK-FGFMSDIFASNSLVNMYAKCGSIE 540

Query: 603 EAVKLIGEIPFQPSVMVWRALLGA 626
           +A +   EIP Q  ++ W A++G 
Sbjct: 541 DADRAFSEIP-QRGIVSWSAMIGG 563



 Score =  231 bits (590), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 257/489 (52%), Gaps = 5/489 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           + +S + +L      R    G+ +H  ++K G  LD F+ N L++ Y +   ++DA  +F
Sbjct: 183 NEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVF 242

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            EM   +T+S+  +  GC      D AL ++  + K G   N F  ++ +K   +M L  
Sbjct: 243 REMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKD 302

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD-MVSWTGMVGCY 221
           +   IH+C  K    +D FV   LID YS C  +D AR+ +D +  KD +++   ++  Y
Sbjct: 303 LGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGY 362

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           ++    E+++ LF ++       N  T++  LKS   L+   V K +H  ++K     D 
Sbjct: 363 SQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDF 422

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           YV   LL+ Y K   I +A   FEE   +D++ ++ MI  Y+Q   ++EAL+L+  M+ +
Sbjct: 423 YVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVA 482

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            + P+ F  +S+L ACA       GKQ+H + +K G  S++F SN+L+++YAKCG IE++
Sbjct: 483 DIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDA 542

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
              F E P++  V+W+ MI G  Q G G++A+ +F+ M+ + + P  +T  SVL AC   
Sbjct: 543 DRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHA 602

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
             ++ G Q    T++ ++       +   +ID+  + G++N+A    + +    + S W 
Sbjct: 603 GLVNEGKQYFE-TMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWG 661

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 662 ALLGAARIH 670


>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15046911-15042560 | 20130731
          Length = 737

 Score =  513 bits (1322), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 283/708 (39%), Positives = 419/708 (59%), Gaps = 54/708 (7%)

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK---DMVSWTGMVGCYA 222
           +IH CV + G +++ FV  ++I  Y  C  V  AR+VFD +  +   D V+W  +V  Y+
Sbjct: 31  SIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYS 90

Query: 223 ENCFYEE-SLQLFCQMRV-MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
            +CF    ++ LF +M V  G  P+   +   L  C  L     G+ VHG  +++   +D
Sbjct: 91  -HCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVED 149

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           ++VG  L+++YAK G + DA   FE M  KDV+ W+ M+  Y+Q+ R ++AL LF  MR+
Sbjct: 150 VFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMRE 209

Query: 341 ----------SSVV-------------------------PNNFTFASVLQACAAQVLLIL 365
                     SSV+                         PN  T  S+L ACA+   L+ 
Sbjct: 210 EKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLH 269

Query: 366 GKQIHSNVLKVGLDS-------NVFVSNALMDVYAKCGEIENSMILFME--SPEQNEVTW 416
           GK+ H   +K  L         ++ V NAL+D+YAKC  +E +  +F E    +++ VTW
Sbjct: 270 GKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTW 329

Query: 417 NTMIVGYVQLGDGEKAMNLFSSM--IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
             MI GY Q GD   A+ LFS M  I N + P + T S VL +CA  +AL+ G Q+H+  
Sbjct: 330 TVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYV 389

Query: 475 IKTR--YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
           ++    Y++ + VAN LIDMY+K G ++ A++ FD M KR  VSW +++ GY MHG S +
Sbjct: 390 LRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSED 449

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           A  +F++M++    P+ +TF+ VL ACS++G++D+G +LF  MS+D+ ++P +EHY CMV
Sbjct: 450 AFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPGVEHYACMV 509

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            LLGR G+  EA +LI ++  +P+ +VW +LL AC    NI+L  F A+ +LE+K  +DG
Sbjct: 510 DLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACRTHSNIELAEFAAKKLLELKADNDG 569

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
           T+ LLSN+YA A+RW +VA +R  MKR G+KK PG SWV+ +  +  F VGD +H  +  
Sbjct: 570 TYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSLK 629

Query: 713 ICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIR 772
           I   L  L ++ +  GYVP  N  L DV+D+EK   L  HSE+LALA+ +L +P    IR
Sbjct: 630 IYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPIR 689

Query: 773 ILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           I KNLRIC DCH+ I  IS +V+ EI++RD +RFHHF++G CSC  YW
Sbjct: 690 ITKNLRICGDCHSAITYISMIVEHEIILRDSSRFHHFKNGSCSCKGYW 737



 Score =  196 bits (497), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 261/542 (48%), Gaps = 60/542 (11%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D +++  + +   +  +   G  +H  +++ G   ++F  N +++ Y +   +  A K+F
Sbjct: 9   DHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVF 68

Query: 103 DEMPLTNTISFVTLAQGCS-RSHQFDHALHVILRLFKE---GHEVNPFVC--TTIIKLLV 156
           DE+        VT     S  SH F    +V + LF+E   G+ + P       I+ +  
Sbjct: 69  DELCYRGICDSVTWNSIVSVYSHCF--VPNVAVSLFREMTVGYGILPDTVGVVNILPVCG 126

Query: 157 SMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG 216
            + L      +H    + G   D FVG +L+D Y+ CG ++ A +VF+ +  KD+V+W  
Sbjct: 127 YLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNA 186

Query: 217 MVGCYAENCFYEESLQLFCQMR--------------VMGY-------------------- 242
           MV  Y++N  +E++L LF +MR              + GY                    
Sbjct: 187 MVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCR 246

Query: 243 -RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD-------QDLYVGTELLELYAKS 294
            RPN  T+ + L +C  + A   GK  H  ++K            DL V   L+++YAK 
Sbjct: 247 CRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKC 306

Query: 295 GDIVDAQLFFEEM-PK-KDVIPWSLMIARYAQSDRSKEALELFHCMRQ--SSVVPNNFTF 350
             +  A+  F+E+ PK +DV+ W++MI  YAQ   +  AL+LF  M +  + +VPN+FT 
Sbjct: 307 KSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTI 366

Query: 351 ASVLQACAAQVLLILGKQIHSNVLKVGL--DSNVFVSNALMDVYAKCGEIENSMILFMES 408
           + VL +CA    L  GKQIH+ VL+  L     +FV+N L+D+Y+K G+++ + ++F   
Sbjct: 367 SCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 426

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
            ++N V+W +++ GY   G  E A  +F  M    + P  +TF  VL AC+    +D G+
Sbjct: 427 SKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGI 486

Query: 469 QVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICGYS 525
            +     K  +  D  V +   ++D+  + GR+ +A RL  D   +   V W +++    
Sbjct: 487 NLFYRMSKD-FGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACR 545

Query: 526 MH 527
            H
Sbjct: 546 TH 547



 Score =  194 bits (493), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 220/439 (50%), Gaps = 52/439 (11%)

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           M+ + + P++YT     K+C  +  F +G S+HGC ++  ++ +++V   ++ +Y K   
Sbjct: 1   MKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKA 60

Query: 297 IVDAQLFFEEMPKK---DVIPWSLMIARYAQSDRSKEALELFHCMRQS-SVVPNNFTFAS 352
           +V A+  F+E+  +   D + W+ +++ Y+       A+ LF  M     ++P+     +
Sbjct: 61  VVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVN 120

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF------- 405
           +L  C    L + G+Q+H   ++ GL  +VFV NAL+D+YAKCG++E++  +F       
Sbjct: 121 ILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKD 180

Query: 406 ----------------------------MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFS 437
                                        E  E + VTW+++I GY Q G G +AM++F 
Sbjct: 181 VVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFR 240

Query: 438 SMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK-------TRYNNDIAVANALI 490
            M G   +P  VT  S+L ACA   AL  G + H  ++K           +D+AV NALI
Sbjct: 241 QMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALI 300

Query: 491 DMYAKCGRINDARLTFDKM--DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT-NC-K 546
           DMYAKC  +  AR  FD++    R+ V+W  MI GY+ HG +  AL LF++M +  NC  
Sbjct: 301 DMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV 360

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYT-CMVGLLGRLGKFDEAV 605
           PN  T   VL +C+    L+ G+ +   + +   I   +     C++ +  + G  D A 
Sbjct: 361 PNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTA- 419

Query: 606 KLIGEIPFQPSVMVWRALL 624
           +++ +   + + + W +LL
Sbjct: 420 QVVFDSMSKRNAVSWTSLL 438


>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:28566228-28568873 | 20130731
          Length = 808

 Score =  513 bits (1320), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/779 (35%), Positives = 442/779 (56%), Gaps = 43/779 (5%)

Query: 79  LFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVT----------------LAQGCS- 121
           ++  N LLN   +   ++DA KLFD+MP  +  S+ T                L  GCS 
Sbjct: 36  IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 95

Query: 122 ------------------RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV 163
                             +   FD  L   +RL  EG + + F   +++++  S+ L   
Sbjct: 96  KSSITWSSIISGYCKFGCKVEAFD--LFRSMRL--EGWKASQFTLGSVLRVCSSLGLIQT 151

Query: 164 CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFC--KDMVSWTGMVGCY 221
              IH  V K G + + FV T L+D Y+ C  V  A  +F G+    K+ V WT MV  Y
Sbjct: 152 GEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGY 211

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    ++++ F  M   G   N YT    L +C  + A   G+ VHG  +K+ +  ++
Sbjct: 212 AQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV 271

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           YV + L+++YAK GD+ +A+   E M   DV+ W+ ++  + +    +EAL LF  M   
Sbjct: 272 YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR 331

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
           ++  +++TF SVL  C   V  I  K +H  ++K G ++   VSNAL+D+YAK G+++ +
Sbjct: 332 NMKIDDYTFPSVLNCCV--VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 389

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F +  E++ ++W +++ GY Q    E+++ +F  M    + P +   +S+L ACA  
Sbjct: 390 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 449

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
             L+ G QVH   IK+      +V N+L+ MYAKCG ++DA   F  M  ++ ++W A+I
Sbjct: 450 TLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAII 509

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY+ +G    +L  ++ M  +  +P+ +TF+G+L ACS+AGL+D+G+  F+ M++ Y I
Sbjct: 510 VGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGI 569

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           +P  EHY CM+ L GR GK DEA +L+ ++  +P   VW++LL AC V +N++L    A 
Sbjct: 570 KPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAAT 629

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
           ++ E++P +   +V+LSNMY+ +++W++VA +RK MK KG+ KEPG SW+E    V+ F 
Sbjct: 630 NLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFI 689

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
             D  HP    I   ++ +  + ++AGYVPD +  L D++ + KE  L  HSE+LA+AFG
Sbjct: 690 SDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFG 749

Query: 762 LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           LL  P +  IRI KNLR+C DCH+ +K IS V  R I++RD N FHHF+ G CSCGDYW
Sbjct: 750 LLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 808



 Score =  199 bits (505), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 200/421 (47%), Gaps = 47/421 (11%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
           +S+H     A   + +Y   +LL   +KSG + DA+  F++MP+KD   W+ MI+ Y   
Sbjct: 23  RSIH--TTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNV 80

Query: 326 DR-------------------------------SKEALELFHCMRQSSVVPNNFTFASVL 354
            R                                 EA +LF  MR      + FT  SVL
Sbjct: 81  GRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVL 140

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPEQN 412
           + C++  L+  G+ IH  V+K G + NVFV   L+D+YAKC  +  +  LF  +E   +N
Sbjct: 141 RVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKN 200

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
            V W  M+ GY Q GDG KA+  F  M    ++  + TF ++L AC+   A   G QVH 
Sbjct: 201 HVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHG 260

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
             +K+ + +++ V +AL+DMYAKCG + +A+   + M+  + VSWN+++ G+  HGL  E
Sbjct: 261 FIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEE 320

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQS--LFKSMSQDYNIEPCIEHYTC 590
           AL LF  M   N K +  TF  VL+ C    +  K     + K+  ++Y +         
Sbjct: 321 ALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVS-----NA 375

Query: 591 MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI---DLGRFCAQHVLEMK 647
           +V +  + G  D A  +  E   +  V+ W +L+     Q N     L  FC   V  + 
Sbjct: 376 LVDMYAKTGDMDCAYTVF-EKMLEKDVISWTSLVTG-YAQNNSHEESLKIFCDMRVTGVN 433

Query: 648 P 648
           P
Sbjct: 434 P 434



 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 43/318 (13%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K +H  I+K G        N L++ Y +   +D A  +F++M   + IS+ +L  G +++
Sbjct: 355 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN 414

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
           +  + +L +   +   G   + F+  +I+     + L      +H    K G +    V 
Sbjct: 415 NSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVY 474

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            SL+  Y+ CG +D A  +F  +  KD+++WT ++  YA+N     SL+ +  M   G R
Sbjct: 475 NSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTR 534

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P+  T    L +C                                   + +G + + + +
Sbjct: 535 PDFITFIGLLFAC-----------------------------------SHAGLVDEGRKY 559

Query: 304 FEEMPKKDVIP-----WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
           F++M K   I      ++ MI  + +S +  EA +L   + Q  V P+   + S+L AC 
Sbjct: 560 FQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL---LDQMDVKPDATVWKSLLSACR 616

Query: 359 AQVLLILGKQIHSNVLKV 376
               L L ++  +N+ ++
Sbjct: 617 VHENLELAERAATNLFEL 634


>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:3127058-3124158 | 20130731
          Length = 845

 Score =  510 bits (1314), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 293/775 (37%), Positives = 432/775 (55%), Gaps = 13/775 (1%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPL-DLFAHNILLNFYVQFDCLDDASKLFD 103
           H   +LL      +H +   Q+   I+K G+   D      L+N + +   +++AS +FD
Sbjct: 20  HPSPSLLDHCTSTKHLH---QILPLIIKTGSYYNDHLFQTKLINMFFKHGSINEASLVFD 76

Query: 104 EMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFV--CTTIIKLLVSMDLP 161
            +     + +  + +G +++     AL    R+  +G  V P V     +++L       
Sbjct: 77  TVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDG--VRPVVYDFAYLLQLCGKKFEL 134

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
                IH  V   G + D F    ++  Y  CG +D A +VF+ +  KD+VSWT ++  Y
Sbjct: 135 EKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGY 194

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N + + +L LF +M+  G + ++ T+ + L +   ++   +GKS+HG AL+  ++  +
Sbjct: 195 AQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFESKV 254

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V   LL +Y + G    A+L FE M  K  + W+ MI  YAQ  +S+EA   F  M   
Sbjct: 255 SVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDE 314

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            V P      + L ACA    L  G+ +H  VL+  LD  V V N+L+ +Y+KC  ++ +
Sbjct: 315 GVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLA 374

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F    ++  VTWN MI+GY Q G   +A+ LF  M   +++P   T  +V+ A A  
Sbjct: 375 ASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADL 434

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
           +       +H L I+T  +ND+ VA ALIDMYAKCG    AR  FD M +R  ++WNAMI
Sbjct: 435 SVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMI 494

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY  HGL  EA+++F+ MQ+    PN  TF+ V+SACS++G +++G   F+SM +DY +
Sbjct: 495 DGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGL 554

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           EP ++HY+ +V LLGR GK   A  LI E+P +P + V  A+LGAC + KN++LG   A 
Sbjct: 555 EPSMDHYSAVVDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACKIHKNVELGEKAAD 614

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
            + E+ P + G HVLL+NMY  A  WD VA VR  M++KG+ K PG S+VE +  VH F 
Sbjct: 615 KLFELDPDEGGYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGCSFVELRNEVHTFY 674

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
            G T+HP  K I A LE L  K RDAGY+PD N++  DVE+  KE+ L  HSERLA+AFG
Sbjct: 675 SGSTNHPQAKKIYAFLEALGDKIRDAGYIPDTNSI-HDVEEKVKEQLLSSHSERLAIAFG 733

Query: 762 LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSC 816
           LL       I + KNLR+C DCH V K IS V  REI+VRD+      Q G   C
Sbjct: 734 LLNTNHGTPIHVRKNLRVCGDCHDVTKYISLVTGREIIVRDLRE----QSGSSGC 784


>Medtr8g065730.2 | PPR containing plant-like protein | HC |
           chr8:27332922-27335168 | 20130731
          Length = 748

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/747 (35%), Positives = 425/747 (56%), Gaps = 49/747 (6%)

Query: 113 FVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLPHVCWTIHACV 171
           +  L + C  +H F  A ++   + K       F+   +I     +  +P+      + V
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYA-----SKV 66

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESL 231
           + +    + +   +++ AYS  G V     +FD +  +D VSW  ++  YA      +S+
Sbjct: 67  FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 126

Query: 232 QLFCQMRVMGYRPNNYTIT-------AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
           + +  M       N   IT       A+ + C+ L     G+ +HG  +K  +   ++VG
Sbjct: 127 KAYNLMLKNDGSINLNRITFSTLLILASKRGCVKL-----GRQIHGHVVKFGFMSYVFVG 181

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDV-------------------------------I 313
           + L+++Y+K G I  A+  F+E+P+K+V                               I
Sbjct: 182 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 241

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI  + Q+   ++A+++F  M+  ++  + +TF SVL AC   + L  GKQ+H+ +
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           ++     N+FV++AL+++Y KC  I+++  +F +   +N V+W  M+VGY Q G  E+A+
Sbjct: 302 IRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
             FS M    ++P + T  SV+ +CA  A+L+ G Q H+  + +   + I V+NAL+ +Y
Sbjct: 362 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 421

Query: 494 AKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFV 553
            KCG I D+   F+++  ++EV+W A++ GY+  G + E + LF  M     KP+K+TF+
Sbjct: 422 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 481

Query: 554 GVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF 613
           GVLSACS AGL++KG  +F+SM  ++ I P  +HYTCM+ L  R G+ +EA   I ++PF
Sbjct: 482 GVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 541

Query: 614 QPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASV 673
            P  + W  LL +C    N+D+G++ A+ ++E+ PH+  ++VLLS++YA   +W+ VA +
Sbjct: 542 SPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARL 601

Query: 674 RKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDC 733
           RK+M+ KG++KEPG SW++ +  VH FS  D S+P +  I + LE LN K    GYVPD 
Sbjct: 602 RKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDM 661

Query: 734 NAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEV 793
           N+VL DV D EK + L  HSE+LA+AFGLL IP    IR++KNLR+C DCH   K IS++
Sbjct: 662 NSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 721

Query: 794 VQREIVVRDINRFHHFQHGVCSCGDYW 820
             REI+VRD  RFH F+ G CSCGD+W
Sbjct: 722 TNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  235 bits (600), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 250/493 (50%), Gaps = 49/493 (9%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQ---GCSRSHQFDHALHVIL 134
           +L++ N +L+ Y +   + +   LFD MP  + +S+ +L     GC   +Q   A +++L
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 135 RLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVC 193
           +   +G   +N    +T++ L        +   IH  V K G  +  FVG+ L+D YS  
Sbjct: 134 K--NDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 194 GNVDAARQVFDGIFCK-------------------------------DMVSWTGMVGCYA 222
           G +  AR+VFD +  K                               D +SWT M+  + 
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +N    +++ +F +M++   + + YT  + L +C G+ A   GK VH   ++  Y  +++
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V + L+E+Y K  +I  A+  F++M  K+V+ W+ M+  Y Q+  S+EA++ F  M++  
Sbjct: 312 VASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           + P++FT  SV+ +CA    L  G Q H+  L  GL S + VSNAL+ +Y KCG IE+S 
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            LF E   ++EVTW  ++ GY Q G   + + LF SM+ + ++P +VTF  VL AC+   
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVA------NALIDMYAKCGRINDARLTFDKMD-KREEV 515
            ++ G Q+    I     N+  +         +ID++++ GRI +AR   +KM    + +
Sbjct: 492 LVEKGNQIFESMI-----NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAI 546

Query: 516 SWNAMICGYSMHG 528
           SW  ++     +G
Sbjct: 547 SWATLLSSCRFYG 559


>Medtr8g065730.1 | PPR containing plant-like protein | HC |
           chr8:27332922-27335168 | 20130731
          Length = 748

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/747 (35%), Positives = 425/747 (56%), Gaps = 49/747 (6%)

Query: 113 FVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLPHVCWTIHACV 171
           +  L + C  +H F  A ++   + K       F+   +I     +  +P+      + V
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYA-----SKV 66

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESL 231
           + +    + +   +++ AYS  G V     +FD +  +D VSW  ++  YA      +S+
Sbjct: 67  FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 126

Query: 232 QLFCQMRVMGYRPNNYTIT-------AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
           + +  M       N   IT       A+ + C+ L     G+ +HG  +K  +   ++VG
Sbjct: 127 KAYNLMLKNDGSINLNRITFSTLLILASKRGCVKL-----GRQIHGHVVKFGFMSYVFVG 181

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDV-------------------------------I 313
           + L+++Y+K G I  A+  F+E+P+K+V                               I
Sbjct: 182 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 241

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI  + Q+   ++A+++F  M+  ++  + +TF SVL AC   + L  GKQ+H+ +
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           ++     N+FV++AL+++Y KC  I+++  +F +   +N V+W  M+VGY Q G  E+A+
Sbjct: 302 IRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
             FS M    ++P + T  SV+ +CA  A+L+ G Q H+  + +   + I V+NAL+ +Y
Sbjct: 362 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 421

Query: 494 AKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFV 553
            KCG I D+   F+++  ++EV+W A++ GY+  G + E + LF  M     KP+K+TF+
Sbjct: 422 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 481

Query: 554 GVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF 613
           GVLSACS AGL++KG  +F+SM  ++ I P  +HYTCM+ L  R G+ +EA   I ++PF
Sbjct: 482 GVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 541

Query: 614 QPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASV 673
            P  + W  LL +C    N+D+G++ A+ ++E+ PH+  ++VLLS++YA   +W+ VA +
Sbjct: 542 SPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARL 601

Query: 674 RKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDC 733
           RK+M+ KG++KEPG SW++ +  VH FS  D S+P +  I + LE LN K    GYVPD 
Sbjct: 602 RKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDM 661

Query: 734 NAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEV 793
           N+VL DV D EK + L  HSE+LA+AFGLL IP    IR++KNLR+C DCH   K IS++
Sbjct: 662 NSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 721

Query: 794 VQREIVVRDINRFHHFQHGVCSCGDYW 820
             REI+VRD  RFH F+ G CSCGD+W
Sbjct: 722 TNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  235 bits (600), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 250/493 (50%), Gaps = 49/493 (9%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQ---GCSRSHQFDHALHVIL 134
           +L++ N +L+ Y +   + +   LFD MP  + +S+ +L     GC   +Q   A +++L
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 135 RLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVC 193
           +   +G   +N    +T++ L        +   IH  V K G  +  FVG+ L+D YS  
Sbjct: 134 K--NDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 194 GNVDAARQVFDGIFCK-------------------------------DMVSWTGMVGCYA 222
           G +  AR+VFD +  K                               D +SWT M+  + 
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +N    +++ +F +M++   + + YT  + L +C G+ A   GK VH   ++  Y  +++
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V + L+E+Y K  +I  A+  F++M  K+V+ W+ M+  Y Q+  S+EA++ F  M++  
Sbjct: 312 VASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           + P++FT  SV+ +CA    L  G Q H+  L  GL S + VSNAL+ +Y KCG IE+S 
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            LF E   ++EVTW  ++ GY Q G   + + LF SM+ + ++P +VTF  VL AC+   
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVA------NALIDMYAKCGRINDARLTFDKMD-KREEV 515
            ++ G Q+    I     N+  +         +ID++++ GRI +AR   +KM    + +
Sbjct: 492 LVEKGNQIFESMI-----NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAI 546

Query: 516 SWNAMICGYSMHG 528
           SW  ++     +G
Sbjct: 547 SWATLLSSCRFYG 559


>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
           20130731
          Length = 719

 Score =  498 bits (1281), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/657 (37%), Positives = 391/657 (59%), Gaps = 2/657 (0%)

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
           + +H  +   G Q + F+ T L++  S  G +  AR++FD     D+  W  ++  Y+ N
Sbjct: 64  YQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRN 123

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
             Y   ++++  M+ +G  P+ +T    LK+C  L  FG+   VH   +   +   ++V 
Sbjct: 124 NMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQ 183

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
             L+ LYAK G I  A++ F+ +  + ++ W+ +++ Y Q+    EAL +F  MR++ V 
Sbjct: 184 NGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVK 243

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           P+  +  SV++A      L  G+ +H  ++K+GL+    +  +L   YAKCGE+  +   
Sbjct: 244 PDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSF 303

Query: 405 FMESPEQNEVT-WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           F +    N+V  WN MI GY + G  E+A+ LF +MI  +++P  +T  S + ACA   +
Sbjct: 304 FDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGS 363

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L     +     K++Y  DI V   LIDMYAKCG +  ARL FD+   ++ V W+AMI G
Sbjct: 364 LKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMG 423

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           Y +HG   EA+ L++ M+Q    PN +TF+G+L+ACS++GL+ +G  LF  M +D+ I+P
Sbjct: 424 YGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCM-RDFGIKP 482

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
             EHY+C+V LLGR G   +A   I ++P +P V VW ALL AC + + + LG + AQ +
Sbjct: 483 RNEHYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVWGALLSACKIHRCVTLGEYAAQKL 542

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVG 703
             + P++ G +V LSN+YA ++ WD VA +R  MK KG+ K  G S ++    +H F  G
Sbjct: 543 FSLDPYNTGHYVQLSNLYASSRMWDRVAYIRVLMKEKGLTKYLGYSVIDINEKLHTFHAG 602

Query: 704 DTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLL 763
           D SHP  K I   L+   ++ ++ G+VP   +VL D+  +EKE +L +HSER+A+A+GL+
Sbjct: 603 DMSHPQAKEIFYELQRQERRLKEVGFVPHTESVLHDLNYEEKEENLCIHSERIAVAYGLI 662

Query: 764 RIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
                 ++RI KNLR CV+CH+ IKLIS++ +REI+VRD NRFHHF+ G+CSCGDYW
Sbjct: 663 STAPRTTLRITKNLRACVNCHSAIKLISKLFEREIIVRDANRFHHFKDGLCSCGDYW 719



 Score =  202 bits (515), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 250/495 (50%), Gaps = 18/495 (3%)

Query: 42  LDSHS-YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
             SHS YA+L+  +    H     Q+H  ++  G   + F    L+N       +  A K
Sbjct: 44  FKSHSFYASLIDNSTHITHL---YQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARK 100

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS-MD 159
           LFDE P  +   +  + +  SR++ + + + +   +   G   + F    ++K     +D
Sbjct: 101 LFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELLD 160

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
               C  +HA V   G  +  FV   L+  Y+ CG +  AR VFD ++ + +VSWT +V 
Sbjct: 161 FGLSC-LVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVS 219

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            Y +N    E+L++F QMR    +P+  ++ + +++   ++    G+S+HGC +K   ++
Sbjct: 220 GYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEE 279

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEM--PKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           +  +   L   YAK G++  A+ FF++M  P K V+ W+ MI+ YA++  ++EA+ELF  
Sbjct: 280 EPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNK-VMMWNAMISGYAKNGHAEEAVELFQA 338

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M   ++ P++ T  S + ACA    L L + +   V K     ++FV+  L+D+YAKCG 
Sbjct: 339 MISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGS 398

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           +E++ ++F  +  ++ V W+ MI+GY   G G +A+ L+ +M    + P +VTF  +L A
Sbjct: 399 VESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTA 458

Query: 458 CAGFAALDPGLQV----HSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           C+    +  G ++        IK R  +     + ++D+  + G +  A +   KM    
Sbjct: 459 CSHSGLIKQGWELFHCMRDFGIKPRNEH----YSCVVDLLGRAGYLKQAYVFILKMPIEP 514

Query: 514 EVS-WNAMICGYSMH 527
            VS W A++    +H
Sbjct: 515 GVSVWGALLSACKIH 529


>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:32273955-32271537 | 20130731
          Length = 672

 Score =  497 bits (1280), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/620 (41%), Positives = 376/620 (60%), Gaps = 12/620 (1%)

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           SW  ++  +A +    ++L  F  MR +   PN  T    +KSC  L     GK +H  A
Sbjct: 53  SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
               Y  D++V + L+++Y+K G + DA+  F+E+P+++V+ W+ MI+ Y Q++R++EA+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172

Query: 333 ELFHC-----------MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
            LF             +    V  ++     V+ ACA   +  + + +H   +K G +  
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGC 232

Query: 382 VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
           + V N LMD YAKCGEI  S  +F    E +  +WN++I  Y Q G   +A +LFS M+ 
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292

Query: 442 -NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIN 500
             +++   VT S+VL ACA   AL  G  +H   +K    +++ V  +++DMY KCGR+ 
Sbjct: 293 RGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVE 352

Query: 501 DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
            AR  FD++ ++   SW  M+ GY MHG   EA+ +F +M +   KPN +TFV VL+ACS
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
           +AGLL +G   F  M  ++++EP IEHY+CMV LLGR G   EA  LI E+  +P  +VW
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472

Query: 621 RALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRK 680
            +LLGAC + KN++LG   A+ + ++ P + G +VLLSN+YA A RWD+V  +R  MK  
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNH 532

Query: 681 GVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 740
           G+ K PG S VE++G VH F VGD  HP ++ I   L+ LN K ++ GY+P+  +VL DV
Sbjct: 533 GLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDV 592

Query: 741 EDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVV 800
           + +EK   L VHSE+LA+AFG++       I+I+KNLRIC DCH  IKLIS++V REIV+
Sbjct: 593 DVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVI 652

Query: 801 RDINRFHHFQHGVCSCGDYW 820
           RD  RFHHF+ G+CSCGDYW
Sbjct: 653 RDSKRFHHFKDGLCSCGDYW 672



 Score =  179 bits (455), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 180/338 (53%), Gaps = 14/338 (4%)

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
            +F + + K  V  W+ +IA +A+S  S +AL  F  MR+ S+ PN  TF   +++C++ 
Sbjct: 40  SMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSL 99

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
             L  GKQIH      G  S++FV++AL+D+Y+KCG + ++  LF E PE+N V+W +MI
Sbjct: 100 YDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMI 159

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTE-----------VTFSSVLRACAGFAALDPGLQ 469
            GYVQ     +A+ LF   +  D    +           V    V+ ACA          
Sbjct: 160 SGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC 219

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGL 529
           VH L +K  +   +AV N L+D YAKCG I+ +R  FD M++ +  SWN++I  Y+ +GL
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279

Query: 530 STEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
           S EA +LF+ M ++   + N +T   VL AC+++G L  G+ +   + +   +E  +   
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK-MELEDNLVVG 338

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           T +V +  + G+ + A K    +  + +V  W  ++  
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAG 375



 Score =  164 bits (415), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 189/378 (50%), Gaps = 24/378 (6%)

Query: 62  AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           AGKQ+H      G   D+F  + L++ Y +   L+DA KLFDE+P  N +S+ ++  G  
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYV 163

Query: 122 RSHQFDHALHVILRLFKE---------------GHEVNPFVCTTIIKLLVSMDLPHVCWT 166
           ++ +   A+     LFKE               G  V+  +   +I     + +  V   
Sbjct: 164 QNERAREAVF----LFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC 219

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H    K+G +    VG +L+DAY+ CG +  +R+VFDG+   D+ SW  ++  YA+N  
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279

Query: 227 YEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
             E+  LF  M   G  R N  T++A L +C    A  +GK +H   +K   + +L VGT
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            ++++Y K G +  A+  F+ + +K+V  W++M+A Y      KEA+++F+ M +  + P
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP 399

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS--NALMDVYAKCGEIENSMI 403
           N  TF SVL AC+   LL  G     N +K   D    +   + ++D+  + G ++ +  
Sbjct: 400 NYITFVSVLAACSHAGLLKEGWHWF-NKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458

Query: 404 LFMESPEQNE-VTWNTMI 420
           L  E   + + + W +++
Sbjct: 459 LIQEMKVKPDFIVWGSLL 476


>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:32273955-32271537 | 20130731
          Length = 672

 Score =  497 bits (1280), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/620 (41%), Positives = 376/620 (60%), Gaps = 12/620 (1%)

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           SW  ++  +A +    ++L  F  MR +   PN  T    +KSC  L     GK +H  A
Sbjct: 53  SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
               Y  D++V + L+++Y+K G + DA+  F+E+P+++V+ W+ MI+ Y Q++R++EA+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172

Query: 333 ELFHC-----------MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
            LF             +    V  ++     V+ ACA   +  + + +H   +K G +  
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGC 232

Query: 382 VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
           + V N LMD YAKCGEI  S  +F    E +  +WN++I  Y Q G   +A +LFS M+ 
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292

Query: 442 -NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIN 500
             +++   VT S+VL ACA   AL  G  +H   +K    +++ V  +++DMY KCGR+ 
Sbjct: 293 RGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVE 352

Query: 501 DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
            AR  FD++ ++   SW  M+ GY MHG   EA+ +F +M +   KPN +TFV VL+ACS
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
           +AGLL +G   F  M  ++++EP IEHY+CMV LLGR G   EA  LI E+  +P  +VW
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472

Query: 621 RALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRK 680
            +LLGAC + KN++LG   A+ + ++ P + G +VLLSN+YA A RWD+V  +R  MK  
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNH 532

Query: 681 GVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 740
           G+ K PG S VE++G VH F VGD  HP ++ I   L+ LN K ++ GY+P+  +VL DV
Sbjct: 533 GLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDV 592

Query: 741 EDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVV 800
           + +EK   L VHSE+LA+AFG++       I+I+KNLRIC DCH  IKLIS++V REIV+
Sbjct: 593 DVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVI 652

Query: 801 RDINRFHHFQHGVCSCGDYW 820
           RD  RFHHF+ G+CSCGDYW
Sbjct: 653 RDSKRFHHFKDGLCSCGDYW 672



 Score =  179 bits (455), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 180/338 (53%), Gaps = 14/338 (4%)

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
            +F + + K  V  W+ +IA +A+S  S +AL  F  MR+ S+ PN  TF   +++C++ 
Sbjct: 40  SMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSL 99

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
             L  GKQIH      G  S++FV++AL+D+Y+KCG + ++  LF E PE+N V+W +MI
Sbjct: 100 YDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMI 159

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTE-----------VTFSSVLRACAGFAALDPGLQ 469
            GYVQ     +A+ LF   +  D    +           V    V+ ACA          
Sbjct: 160 SGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC 219

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGL 529
           VH L +K  +   +AV N L+D YAKCG I+ +R  FD M++ +  SWN++I  Y+ +GL
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279

Query: 530 STEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
           S EA +LF+ M ++   + N +T   VL AC+++G L  G+ +   + +   +E  +   
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK-MELEDNLVVG 338

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           T +V +  + G+ + A K    +  + +V  W  ++  
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAG 375



 Score =  164 bits (415), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 189/378 (50%), Gaps = 24/378 (6%)

Query: 62  AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           AGKQ+H      G   D+F  + L++ Y +   L+DA KLFDE+P  N +S+ ++  G  
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYV 163

Query: 122 RSHQFDHALHVILRLFKE---------------GHEVNPFVCTTIIKLLVSMDLPHVCWT 166
           ++ +   A+     LFKE               G  V+  +   +I     + +  V   
Sbjct: 164 QNERAREAVF----LFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC 219

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H    K+G +    VG +L+DAY+ CG +  +R+VFDG+   D+ SW  ++  YA+N  
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279

Query: 227 YEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
             E+  LF  M   G  R N  T++A L +C    A  +GK +H   +K   + +L VGT
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            ++++Y K G +  A+  F+ + +K+V  W++M+A Y      KEA+++F+ M +  + P
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP 399

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS--NALMDVYAKCGEIENSMI 403
           N  TF SVL AC+   LL  G     N +K   D    +   + ++D+  + G ++ +  
Sbjct: 400 NYITFVSVLAACSHAGLLKEGWHWF-NKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458

Query: 404 LFMESPEQNE-VTWNTMI 420
           L  E   + + + W +++
Sbjct: 459 LIQEMKVKPDFIVWGSLL 476


>Medtr8g069550.1 | PPR containing plant-like protein | HC |
           chr8:29180878-29178605 | 20130731
          Length = 757

 Score =  495 bits (1275), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/747 (34%), Positives = 423/747 (56%), Gaps = 49/747 (6%)

Query: 113 FVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLPHVCWTIHACV 171
           +  L + C  +  F  A ++   + K       F+   +I     +  +P+ C      V
Sbjct: 21  YCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYAC-----KV 75

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESL 231
           + +    + +   +++ AYS  G V     +FD +  +D VSW  ++  YA      +S+
Sbjct: 76  FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 135

Query: 232 QLFCQM--RVMGYRPNNYT-----ITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
           + +  M      +  N  T     I A+ + C+ L     G+ +HG  +K  +   ++VG
Sbjct: 136 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKL-----GRQIHGHVVKFGFMSYVFVG 190

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDV-------------------------------I 313
           + L+++Y+K G I  A+  F+E+P+K+V                               I
Sbjct: 191 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 250

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI  + Q+   ++A+++F  M+  ++  + +TF SVL AC   + L  GKQ+H+ +
Sbjct: 251 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           ++     N+FV++AL+ +Y KC  I+++  +F +   +N V+W  M+VGY Q G  E+A+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
             FS M    ++P + T  SV+ +CA  A+L+ G Q H+  + +   + I V+NAL+ +Y
Sbjct: 371 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 430

Query: 494 AKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFV 553
            KCG I D+   F+++  ++EV+W A++ GY+  G + E + LF  M     KP+K+TF+
Sbjct: 431 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 490

Query: 554 GVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF 613
           GVLSACS AGL++KG  +F+SM  ++ I P  +HYTCM+ L  R G+ +EA   I ++PF
Sbjct: 491 GVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 550

Query: 614 QPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASV 673
            P  + W  LL +C    N+D+G++ A+ ++E+ PH+  ++VLLS++YA   +W+ VA +
Sbjct: 551 SPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARL 610

Query: 674 RKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDC 733
           RK+M+ KG++KEPG SW++ +  VH FS  D S+P +  I + LE LN K    GYVPD 
Sbjct: 611 RKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDM 670

Query: 734 NAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEV 793
           N+VL DV D EK + L  HSE+LA+AFGLL IP    IR++KNLR+C DCH   K IS++
Sbjct: 671 NSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 730

Query: 794 VQREIVVRDINRFHHFQHGVCSCGDYW 820
             REI+VRD  RFH F+ G CS GD+W
Sbjct: 731 THREILVRDTARFHLFKDGTCSYGDFW 757



 Score =  229 bits (584), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 251/503 (49%), Gaps = 49/503 (9%)

Query: 68  CDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQ---GCSRSH 124
           C +  +    +L++ N +L+ Y +   + +   LFD MP  + +S+ +L     GC   +
Sbjct: 73  CKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIY 132

Query: 125 QFDHALHVILRLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
           Q   A +++L+   +G   +N    +T++ L        +   IH  V K G  +  FVG
Sbjct: 133 QSVKAYNLMLK--NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVG 190

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCK-------------------------------DMV 212
           + L+D YS  G +  AR+VFD +  K                               D +
Sbjct: 191 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 250

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           SWT M+  + +N    +++ +F +M++   + + YT  + L +C  + A   GK VH   
Sbjct: 251 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
           ++  Y  +++V + L+ +Y K  +I  A+  F++M  K+V+ W+ M+  Y Q+  S+EA+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVY 392
           + F  M++  + P++FT  SV+ +CA    L  G Q H+  L  GL S + VSNAL+ +Y
Sbjct: 371 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 430

Query: 393 AKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
            KCG IE+S  LF E   ++EVTW  ++ GY Q G   + + LF SM+ + ++P +VTF 
Sbjct: 431 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 490

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA------NALIDMYAKCGRINDARLTF 506
            VL AC+    ++ G Q+    I     N+  +         +ID++++ GRI +AR   
Sbjct: 491 GVLSACSRAGLVEKGNQIFESMI-----NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 545

Query: 507 DKMD-KREEVSWNAMICGYSMHG 528
           +KM    + +SW  ++     +G
Sbjct: 546 NKMPFSPDAISWATLLSSCRFYG 568


>Medtr8g069550.2 | PPR containing plant-like protein | HC |
           chr8:29180878-29178605 | 20130731
          Length = 757

 Score =  495 bits (1275), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/747 (34%), Positives = 423/747 (56%), Gaps = 49/747 (6%)

Query: 113 FVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLPHVCWTIHACV 171
           +  L + C  +  F  A ++   + K       F+   +I     +  +P+ C      V
Sbjct: 21  YCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYAC-----KV 75

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESL 231
           + +    + +   +++ AYS  G V     +FD +  +D VSW  ++  YA      +S+
Sbjct: 76  FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 135

Query: 232 QLFCQM--RVMGYRPNNYT-----ITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
           + +  M      +  N  T     I A+ + C+ L     G+ +HG  +K  +   ++VG
Sbjct: 136 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKL-----GRQIHGHVVKFGFMSYVFVG 190

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDV-------------------------------I 313
           + L+++Y+K G I  A+  F+E+P+K+V                               I
Sbjct: 191 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 250

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI  + Q+   ++A+++F  M+  ++  + +TF SVL AC   + L  GKQ+H+ +
Sbjct: 251 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           ++     N+FV++AL+ +Y KC  I+++  +F +   +N V+W  M+VGY Q G  E+A+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
             FS M    ++P + T  SV+ +CA  A+L+ G Q H+  + +   + I V+NAL+ +Y
Sbjct: 371 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 430

Query: 494 AKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFV 553
            KCG I D+   F+++  ++EV+W A++ GY+  G + E + LF  M     KP+K+TF+
Sbjct: 431 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 490

Query: 554 GVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF 613
           GVLSACS AGL++KG  +F+SM  ++ I P  +HYTCM+ L  R G+ +EA   I ++PF
Sbjct: 491 GVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 550

Query: 614 QPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASV 673
            P  + W  LL +C    N+D+G++ A+ ++E+ PH+  ++VLLS++YA   +W+ VA +
Sbjct: 551 SPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARL 610

Query: 674 RKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDC 733
           RK+M+ KG++KEPG SW++ +  VH FS  D S+P +  I + LE LN K    GYVPD 
Sbjct: 611 RKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDM 670

Query: 734 NAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEV 793
           N+VL DV D EK + L  HSE+LA+AFGLL IP    IR++KNLR+C DCH   K IS++
Sbjct: 671 NSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 730

Query: 794 VQREIVVRDINRFHHFQHGVCSCGDYW 820
             REI+VRD  RFH F+ G CS GD+W
Sbjct: 731 THREILVRDTARFHLFKDGTCSYGDFW 757



 Score =  229 bits (584), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 251/503 (49%), Gaps = 49/503 (9%)

Query: 68  CDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQ---GCSRSH 124
           C +  +    +L++ N +L+ Y +   + +   LFD MP  + +S+ +L     GC   +
Sbjct: 73  CKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIY 132

Query: 125 QFDHALHVILRLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
           Q   A +++L+   +G   +N    +T++ L        +   IH  V K G  +  FVG
Sbjct: 133 QSVKAYNLMLK--NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVG 190

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCK-------------------------------DMV 212
           + L+D YS  G +  AR+VFD +  K                               D +
Sbjct: 191 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 250

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           SWT M+  + +N    +++ +F +M++   + + YT  + L +C  + A   GK VH   
Sbjct: 251 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
           ++  Y  +++V + L+ +Y K  +I  A+  F++M  K+V+ W+ M+  Y Q+  S+EA+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVY 392
           + F  M++  + P++FT  SV+ +CA    L  G Q H+  L  GL S + VSNAL+ +Y
Sbjct: 371 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 430

Query: 393 AKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
            KCG IE+S  LF E   ++EVTW  ++ GY Q G   + + LF SM+ + ++P +VTF 
Sbjct: 431 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 490

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA------NALIDMYAKCGRINDARLTF 506
            VL AC+    ++ G Q+    I     N+  +         +ID++++ GRI +AR   
Sbjct: 491 GVLSACSRAGLVEKGNQIFESMI-----NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 545

Query: 507 DKMD-KREEVSWNAMICGYSMHG 528
           +KM    + +SW  ++     +G
Sbjct: 546 NKMPFSPDAISWATLLSSCRFYG 568


>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:24361845-24364937 | 20130731
          Length = 975

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/762 (35%), Positives = 432/762 (56%), Gaps = 5/762 (0%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G+ +H   LK     D+F  N L+  Y +F  ++ A K+FD+MP  N +S+ ++   C  
Sbjct: 215 GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLE 274

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCT--TIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
           +  F+ +  +   L      + P V T  T+I L        +    H    K G   + 
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGEL 334

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
            V +SL+D YS CG +  AR +FD    K+++SW  M+G Y+++  +  + +L  +M++ 
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQME 393

Query: 241 G-YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ-DLYVGTELLELYAKSGDIV 298
              + N  T+   L  C     F   K +HG AL+  + Q D  V    +  YAK G + 
Sbjct: 394 DKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLH 453

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
            A+  F  M  K V  W+ +I  + Q+   ++AL+L+  MR S + P+ FT AS+L ACA
Sbjct: 454 YAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACA 513

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
               L  GK+IH ++L+ G + + F+  +L+ +Y +CG+I  + + F    E+N V WNT
Sbjct: 514 RLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNT 573

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
           MI G+ Q      A+++F  M+ + + P E++    L AC+  +AL  G ++H   +K+ 
Sbjct: 574 MINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSH 633

Query: 479 YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
                 V  +LIDMYAKCG +  ++  FD++  + EV+WN +I GY +HG   +A+ LF 
Sbjct: 634 LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFK 693

Query: 539 KMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRL 598
            MQ    +P+ +TF+ +L+AC++AGL+ +G      M   + I+P +EHY C+V +LGR 
Sbjct: 694 SMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRA 753

Query: 599 GKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLS 658
           G+ +EA++L+ E+P +P   +W +LL +C   +++D+G   A  +LE+ P     +VL+S
Sbjct: 754 GRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLIS 813

Query: 659 NMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLE 718
           N YA   +WD V  +R+ MK  G++K+ G SW+E  G V  F VGD S   +  I     
Sbjct: 814 NFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWI 873

Query: 719 WLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLR 778
            L KK    GY PD + VL ++E+DEK + L  HSE+LA++FGLL      ++R+ KNLR
Sbjct: 874 ELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLR 933

Query: 779 ICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           ICVDCH  IKL+S++ +REI+VRD  RFHHF++G CSCGDYW
Sbjct: 934 ICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  219 bits (558), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 250/492 (50%), Gaps = 6/492 (1%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEV- 143
           L+  Y   D   D+  +F+     N   +  L  G  R+  F  A+ V + +      V 
Sbjct: 135 LVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVP 194

Query: 144 NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF 203
           + F    +IK  V +    +   +H    K    +D FVG +LI  Y   G V++A +VF
Sbjct: 195 DNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVF 254

Query: 204 DGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV--MGYRPNNYTITAALKSCLGLEA 261
           D +  +++VSW  ++    EN  +EES  LF  +     G  P+  T+   +  C     
Sbjct: 255 DKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGE 314

Query: 262 FGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIAR 321
             +G   HG ALK     +L V + LL++Y+K G + +A++ F +  +K+VI W+ MI  
Sbjct: 315 VRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGG 373

Query: 322 YAQSDRSKEALELFHCMR-QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG-LD 379
           Y++    + A EL   M+ +  V  N  T  +VL  C  ++  +  K+IH   L+ G + 
Sbjct: 374 YSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQ 433

Query: 380 SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
           S+  V+NA +  YAKCG +  +  +F     +   +WN +I G+VQ G   KA++L+  M
Sbjct: 434 SDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLM 493

Query: 440 IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRI 499
            G+ ++P   T +S+L ACA   +L  G ++H   ++  +  D  +  +L+ +Y +CG+I
Sbjct: 494 RGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKI 553

Query: 500 NDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSAC 559
             A+L FD M+++  V WN MI G+S +    +AL++F++M  +   P++++ +G L AC
Sbjct: 554 LLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGAC 613

Query: 560 SNAGLLDKGQSL 571
           S    L  G+ L
Sbjct: 614 SQVSALRLGKEL 625



 Score =  196 bits (499), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 225/418 (53%), Gaps = 7/418 (1%)

Query: 167 IHACVYKRGH-QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           IH  +    H Q D  + T L+  YS+C +   +  VF+    K++  W  ++  Y  N 
Sbjct: 115 IHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNS 174

Query: 226 FYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
            + +++ +F +M  +  + P+N+T+   +K+C+G+    +G++VHG ALK     D++VG
Sbjct: 175 LFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVG 234

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS--S 342
             L+ +Y K G +  A   F++MP+++++ W+ ++    ++   +E+  LF  +      
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEG 294

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           ++P+  T  +V+  CA Q  + LG   H   LK+GL   + V+++L+D+Y+KCG +  + 
Sbjct: 295 LMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR 354

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGF 461
           +LF ++ E+N ++WN+MI GY +  D   A  L   M   D ++  EVT  +VL  C   
Sbjct: 355 VLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEE 413

Query: 462 AALDPGLQVHSLTIKTRY-NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
                  ++H   ++  +  +D  VANA +  YAKCG ++ A   F  M+ +   SWNA+
Sbjct: 414 IQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNAL 473

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQD 578
           I G+  +G   +AL+L+  M+ +  +P+  T   +LSAC+    L  G+ +  SM ++
Sbjct: 474 IGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN 531



 Score =  153 bits (386), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 172/316 (54%), Gaps = 6/316 (1%)

Query: 249 ITAALKSCLGLEAFGVGKSVHG-CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           I   L+ C   +   +G+ +H   +    +  D+ + T L+ +Y+      D+ L F   
Sbjct: 96  IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAAQVLLILG 366
            +K++  W+ +++ Y ++   ++A+ +F   +  +  VP+NFT   V++AC     + LG
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           + +H   LK  + S+VFV NAL+ +Y K G +E+++ +F + P++N V+WN+++   ++ 
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275

Query: 427 GDGEKAMNLFSSMIGND--MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
           G  E++  LF  ++  D  + P   T  +V+  CA    +  G+  H L +K     ++ 
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELK 335

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ-QT 543
           V ++L+DMY+KCG + +AR+ FD  +++  +SWN+MI GYS       A  L  KMQ + 
Sbjct: 336 VNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMED 394

Query: 544 NCKPNKLTFVGVLSAC 559
             K N++T + VL  C
Sbjct: 395 KVKVNEVTLLNVLPVC 410



 Score = 84.0 bits (206), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 54/365 (14%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  + A+LL    + +  + GK++H  +L+ G  LD F    L++ YVQ   +  A   F
Sbjct: 501 DLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFF 560

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           D M   N + + T+  G S++     AL +  ++       +       +     +    
Sbjct: 561 DNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALR 620

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +H    K      +FV  SLID Y+ CG ++ ++ +FD +  K  V+W  ++  Y 
Sbjct: 621 LGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYG 680

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC-------LGLEAFGVGKSVHGCALKA 275
            +    ++++LF  M+  G+RP++ T  A L +C        GLE  G  +S+ G   K 
Sbjct: 681 IHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPK- 739

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
                       LE YA   D++                         ++ R  EALEL 
Sbjct: 740 ------------LEHYACVVDML------------------------GRAGRLNEALELV 763

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLD---SNVFVSNALMDVY 392
           + +      P++  ++S+L +C     L +G+++ + +L++G D   + V +SN     Y
Sbjct: 764 NELPDK---PDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISN----FY 816

Query: 393 AKCGE 397
           A+ G+
Sbjct: 817 ARLGK 821


>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr7:13795126-13792268 | 20130731
          Length = 952

 Score =  491 bits (1265), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/794 (34%), Positives = 428/794 (53%), Gaps = 35/794 (4%)

Query: 62  AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           +GK++H  +++ G   D+F  +  +NFY +  C+ +A  +FD MP  + +++ +L+    
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYV 218

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
                   L+V   +  +G + +P   + I+     +        IH    K G   + F
Sbjct: 219 NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVF 278

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           V  +L++ Y  C  V  A+ VFD +  +++++W  +  CY    F ++ L +F +M + G
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG 338

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            +P+   +++ L +C  L+    GK++HG A+K    +D++V T L+ LYA    + +AQ
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F+ MP ++V+ W+ + + Y      ++ L +F  M  + V P+  T  S+L AC+   
Sbjct: 399 TVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQ 458

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ---------- 411
            L  GK IH   ++ G+  +VFV NAL+ +YAKC  +  + ++F   P +          
Sbjct: 459 DLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILT 518

Query: 412 -------------------------NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQP 446
                                    +E+TW+ +I G V+    E+AM +F  M     +P
Sbjct: 519 AYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKP 578

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTF 506
            E T  S+LRAC+    L  G ++H    +   + D+A  NAL+DMYAKCG ++ +R  F
Sbjct: 579 DETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVF 638

Query: 507 DKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD 566
           D M  ++  SWN MI    MHG   EAL+LF KM  +  KP+  TF  VLSACS++ L++
Sbjct: 639 DMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVE 698

Query: 567 KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           +G  +F SMS+D+ +EP  EHYTC+V +  R G  +EA   I  +P +P+ + W+A L  
Sbjct: 699 EGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758

Query: 627 CVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEP 686
           C V KN++L +  A+ + E+ P+    +V L N+   AK W   + +RK MK +G+ K P
Sbjct: 759 CRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTP 818

Query: 687 GLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKE 746
           G SW      VH F  GD S+ ++  I   L+ L  K + AGY PD + VL D++ +EK 
Sbjct: 819 GCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKA 878

Query: 747 RHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRF 806
             L  HSE+LA+AFG+L +    +IR+ KNLRIC DCH  IK +S VV   IVVRD  RF
Sbjct: 879 ESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRF 938

Query: 807 HHFQHGVCSCGDYW 820
           HHF++G CSC D+W
Sbjct: 939 HHFKNGNCSCKDFW 952



 Score =  256 bits (653), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 276/542 (50%), Gaps = 3/542 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D   + A+ +    +R     KQ H D  + G   D+   N  ++ Y +  C++ A ++F
Sbjct: 39  DKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVF 98

Query: 103 DEMPLTNTISFVTLAQGCSRSHQF-DHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           D++   + +++ +L+  C  +  F    L+V  ++     + NP   ++I+     +   
Sbjct: 99  DDLVARDVVTWNSLS-ACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDL 157

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
                IH  V + G   D FV ++ ++ Y+ C  V  A+ VFD +  +D+V+W  +  CY
Sbjct: 158 KSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCY 217

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
               F ++ L +F +M + G +P+  T++  L +C  L+    GK++HG ALK    +++
Sbjct: 218 VNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENV 277

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           +V   L+ LY     + +AQ  F+ MP ++VI W+ + + Y      ++ L +F  M  +
Sbjct: 278 FVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLN 337

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            V P+    +S+L AC+    L  GK IH   +K G+  +VFV  AL+++YA C  +  +
Sbjct: 338 GVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREA 397

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F   P +N VTWN++   YV  G  +K +N+F  M+ N ++P  VT  S+L AC+  
Sbjct: 398 QTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL 457

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
             L  G  +H   ++     D+ V NAL+ +YAKC  + +A++ FD +  RE  SWN ++
Sbjct: 458 QDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGIL 517

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             Y  +    + L +F++M +   K +++T+  V+  C     +++   +F+ M Q    
Sbjct: 518 TAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGF 576

Query: 582 EP 583
           +P
Sbjct: 577 KP 578



 Score =  239 bits (609), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 235/466 (50%), Gaps = 6/466 (1%)

Query: 175 GHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLF 234
           G  +D  +G + I AY  C  V+ AR+VFD +  +D+V+W  +  CY    F ++ L +F
Sbjct: 70  GVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVF 129

Query: 235 CQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKS 294
            +M +   + N  T+++ L  C  L+    GK +HG  ++    +D++V +  +  YAK 
Sbjct: 130 RKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKC 189

Query: 295 GDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
             + +AQ  F+ MP +DV+ W+ + + Y      ++ L +F  M    V P+  T + +L
Sbjct: 190 LCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCIL 249

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
            AC+    L  GK IH   LK G+  NVFVSNAL+++Y  C  +  +  +F   P +N +
Sbjct: 250 SACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVI 309

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           TWN++   YV  G  +K +N+F  M  N ++P  +  SS+L AC+    L  G  +H   
Sbjct: 310 TWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFA 369

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
           +K     D+ V  AL+++YA C  + +A+  FD M  R  V+WN++   Y   G   + L
Sbjct: 370 VKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGL 429

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTC--MV 592
           N+F +M     KP+ +T + +L ACS+   L  G+ +     +   +E   + + C  ++
Sbjct: 430 NVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE---DVFVCNALL 486

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRF 638
            L  +     EA  +   IP +  V  W  +L A    K  + G +
Sbjct: 487 SLYAKCVCVREAQVVFDLIPHR-EVASWNGILTAYFTNKEYEKGLY 531



 Score =  141 bits (355), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 131/242 (54%)

Query: 330 EALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM 389
           EA++++   R   + P+   F +V +ACAA    +  KQ H +  + G+ S+V + NA +
Sbjct: 23  EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82

Query: 390 DVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEV 449
             Y KC  +E +  +F +   ++ VTWN++   YV  G  ++ +N+F  M  N ++   +
Sbjct: 83  HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           T SS+L  C+    L  G ++H   ++     D+ V++A ++ YAKC  + +A+  FD M
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
             R+ V+WN++   Y   G   + LN+F +M     KP+ +T   +LSACS+   L  G+
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262

Query: 570 SL 571
           ++
Sbjct: 263 AI 264


>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:26513420-26510735 | 20130731
          Length = 659

 Score =  491 bits (1264), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/654 (39%), Positives = 379/654 (57%), Gaps = 34/654 (5%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H  ++      +  +G  L+ +Y+ CG     R+VFD +  +++V +  M+  Y  N  
Sbjct: 40  LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHR 99

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           Y++ L +F +M   G+RP+NYT    LK+C   E    G  +HG  LK   D +L+VG  
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNG 159

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+ +Y K G + +A+  F+EM  KDV+ W+ M+A YA + R  +ALE+   M      P+
Sbjct: 160 LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPD 219

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
             T AS++ A A             NVL V                           +F+
Sbjct: 220 GCTMASLMPAVA--------NTSSENVLYVEK-------------------------IFV 246

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
               +N ++WN MI  Y++     +A++L+  M    ++P  +TF+SVL AC   +AL  
Sbjct: 247 NLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLL 306

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G ++H    K +   ++ + N+LIDMYA+CG ++DA+  FD+M  R+  SW ++I  Y M
Sbjct: 307 GRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGM 366

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
            G    A+ LF +M  +   P+ + FV +LSACS++GLLD+G+  FK M+ DY I P IE
Sbjct: 367 TGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIE 426

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY C+V LLGR G+ DEA  +I ++P +P+  VW  LL +C V  N+D+G   A ++L++
Sbjct: 427 HYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQL 486

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
            P   G +VLLSN+YA A RW  V  +R  MKRK ++K PG+S VE    VH F  GDTS
Sbjct: 487 APEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTS 546

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIP 766
           HP +K I   L  L  K ++ GYVP+ ++ L DVE+++KE HL VHSE+LA+ F LL   
Sbjct: 547 HPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQ 606

Query: 767 STCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
               IRI KNLR+C DCH   KLIS++V+REI+VRD NRFHHF+ GVCSCGDYW
Sbjct: 607 EY-QIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  176 bits (446), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 194/404 (48%), Gaps = 34/404 (8%)

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           K+FDEM   N + +  + +    +H++D  L V   +   G   + +    ++K     +
Sbjct: 74  KVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSE 133

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
                  IH  V K G   + FVG  LI  Y  CG +  AR+VFD +  KD+VSW  MV 
Sbjct: 134 NLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVA 193

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            YA N  ++++L++  +M   G +P+  T+ + + +     +  V               
Sbjct: 194 GYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV--------------- 238

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
            LYV                 +  F  + +K++I W++MI  Y ++    +A++L+  M 
Sbjct: 239 -LYV-----------------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQME 280

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
           +  V P+  TFASVL AC     L+LG++IH  V K  L  N+ + N+L+D+YA+CG ++
Sbjct: 281 KCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLD 340

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           ++  +F     ++  +W ++I  Y   G G  A+ LF+ M+ +   P  + F ++L AC+
Sbjct: 341 DAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACS 400

Query: 460 GFAALDPG-LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
               LD G +    +T   R    I     L+D+  + GR+++A
Sbjct: 401 HSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEA 444



 Score =  126 bits (317), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 175/380 (46%), Gaps = 35/380 (9%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+++Y  +L+    + +   G  +H D+LK G   +LF  N L+  Y +  CL +A ++F
Sbjct: 118 DNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVF 177

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           DEM   + +S+ ++  G + + +FD AL +   +   G +  P  CT     + S+ +P 
Sbjct: 178 DEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQK--PDGCT-----MASL-MPA 229

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           V                         A +   NV    ++F  +  K+++SW  M+  Y 
Sbjct: 230 V-------------------------ANTSSENVLYVEKIFVNLERKNLISWNVMIRVYM 264

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +N    +++ L+ QM      P+  T  + L +C  L A  +G+ +H    K     +L 
Sbjct: 265 KNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLL 324

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           +   L+++YA+ G + DA+  F+ M  +DV  W+ +I+ Y  + +   A+ LF  M  S 
Sbjct: 325 LENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSG 384

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENS 401
             P++  F ++L AC+   LL  G+     +     +   +     L+D+  + G ++ +
Sbjct: 385 QAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEA 444

Query: 402 MILFMESP-EQNEVTWNTMI 420
             +  + P E NE  W T++
Sbjct: 445 YNIIKQMPIEPNERVWATLL 464



 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 17/325 (5%)

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           K++H+ +  +    N  +   LM  YA CGE   +  +F E  ++N V +N MI  YV  
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
              +  + +F  M+    +P   T+  VL+AC+    L  GL +H   +K   + ++ V 
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVG 157

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           N LI MY KCG + +AR  FD+M  ++ VSWN+M+ GY+ +    +AL +  +M+    K
Sbjct: 158 NGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQK 217

Query: 547 PNKLTFVGVLSACSNAGLLD--KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
           P+  T   ++ A +N    +    + +F ++ +   I      +  M+ +  +     +A
Sbjct: 218 PDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLIS-----WNVMIRVYMKNSLPTQA 272

Query: 605 VKLIGEIP---FQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN-- 659
           V L  ++     +P  + + ++L AC     + LGR   ++V + K      ++LL N  
Sbjct: 273 VDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKL---CPNLLLENSL 329

Query: 660 --MYAVAKRWDNVASVRKNMKRKGV 682
             MYA     D+   V   MK + V
Sbjct: 330 IDMYARCGCLDDAKRVFDRMKFRDV 354


>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:38310385-38313323 | 20130731
          Length = 684

 Score =  491 bits (1264), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/660 (39%), Positives = 382/660 (57%), Gaps = 7/660 (1%)

Query: 166 TIHACVYKRGHQAD--AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
           TIHA +  R H     +F+   L++ YS    +++A+ V      + +V+WT ++     
Sbjct: 27  TIHAHII-RTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVH 85

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           N  +  +L  F  MR    +PN++T     K+   ++    GK +HG ALK     D++V
Sbjct: 86  NRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFV 145

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
           G    ++Y K+G   DA   F+EMP++++  W+  I+   Q  RS +A+  F        
Sbjct: 146 GCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG 205

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            PN+ TF + L AC   V L LG+Q+H+ +++ G   +V V+N L+D Y KCG+I ++ +
Sbjct: 206 EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEM 265

Query: 404 LFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
           +F      +N V+W +M+   VQ  + E+A  +F      +++PT+   SSVL ACA   
Sbjct: 266 VFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSACAELG 324

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            L+ G  VH+L +K    ++I V +AL+DMY KCG I +A   F ++ +R  V+WNAMI 
Sbjct: 325 GLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIG 384

Query: 523 GYSMHGLSTEALNLFNKMQ--QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           GY+  G    AL LF +M       +P+ +T + +LS CS  G +++G  +F+SM  +Y 
Sbjct: 385 GYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYG 444

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           IEP  EH+ C+V LLGR G  D A + I  +  QP++ VW ALLGAC +    +LG+  A
Sbjct: 445 IEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAA 504

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYF 700
           + + E+   D G HV+LSNM A A RW+    VRK MK  G+KK  G SW+  +  +H F
Sbjct: 505 EKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVF 564

Query: 701 SVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAF 760
              D+SH  N  I AML  L    ++AGYVPD N  L D+ED+EK   +W HSE++ALAF
Sbjct: 565 QAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAF 624

Query: 761 GLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           GL+ +P    IRI KNLRIC DCH+ IK IS +V REI+VRD +RFH F+ G CSC DYW
Sbjct: 625 GLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  225 bits (574), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 243/488 (49%), Gaps = 9/488 (1%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
            +LL+ A+       G+ +H  I++    PL  F  N L+N Y + D L+ A  +     
Sbjct: 10  GSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTH 69

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWT 166
           L   +++ +L  GC  + +F  AL     + ++  + N F    + K    + +P     
Sbjct: 70  LRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQ 129

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IH    K G   D FVG S  D Y   G    A  +FD +  +++ +W   +    ++  
Sbjct: 130 IHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRR 189

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
             +++  F +   +   PN+ T  A L +C+ +    +G+ +H   ++  Y +D+ V   
Sbjct: 190 SLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANG 249

Query: 287 LLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
           L++ Y K GDIV A++ F  +  +K+V+ W  M+A   Q+   + A  +F   R+  V P
Sbjct: 250 LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK-EVEP 308

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
            +F  +SVL ACA    L LG+ +H+  +K  ++ N+FV +AL+D+Y KCG IEN+  +F
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI--GNDMQPTEVTFSSVLRACAGFAA 463
            E PE+N VTWN MI GY   GD + A+ LF  M    + ++P+ VT  S+L  C+   A
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428

Query: 464 LDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEVS-WNAM 520
           ++ G+Q+   +++  Y  +    +   ++D+  + G ++ A      M  +  +S W A+
Sbjct: 429 VERGIQIFE-SMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGAL 487

Query: 521 ICGYSMHG 528
           +    MHG
Sbjct: 488 LGACRMHG 495



 Score = 90.5 bits (223), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           +S ++ A L   +     N G+QLH  I++ G   D+   N L++FY +   +  A  +F
Sbjct: 208 NSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVF 267

Query: 103 DEMP-LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           + +    N +S+ ++     ++H+ + A  V L+  KE  E   F+ ++++     +   
Sbjct: 268 NRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEV-EPTDFMISSVLSACAELGGL 326

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++HA   K   + + FVG++L+D Y  CG+++ A QVF  +  +++V+W  M+G Y
Sbjct: 327 ELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGY 386

Query: 222 AENCFYEESLQLFCQMRV--MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           A     + +L+LF +M +   G RP+  T+ + L  C  + A   G  +   +++  Y  
Sbjct: 387 AHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFE-SMRLNY-- 443

Query: 280 DLYVGTE----LLELYAKSGDIVDAQLFFEEMPKKDVIP-WSLMIA 320
            +  G E    +++L  +SG +  A  F + M  +  I  W  ++ 
Sbjct: 444 GIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLG 489


>Medtr1g103660.1 | PPR containing plant-like protein | HC |
           chr1:46920306-46922872 | 20130731
          Length = 684

 Score =  491 bits (1263), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/660 (39%), Positives = 381/660 (57%), Gaps = 7/660 (1%)

Query: 166 TIHACVYKRGHQAD--AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
           TIHA +  R H     +F+   L++ YS    +++A+ V      + +V+WT ++     
Sbjct: 27  TIHAHII-RTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVH 85

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           N  +  +L  F  MR    +PN++T     K+   ++    GK +HG ALK     D++V
Sbjct: 86  NRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIYDVFV 145

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
           G    ++Y K+G   DA   F+EMP +++  W+  I+   Q  RS + +  F        
Sbjct: 146 GCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHG 205

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            PN+ TF + L AC   + L LG+Q+H+ +++ G   +V V+N L+D Y KCG+I ++ +
Sbjct: 206 EPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEM 265

Query: 404 LFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
           +F      +N V+W +M+   VQ  + E+A  +F   +  +++PT+   SSVL ACA   
Sbjct: 266 VFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQ-VRKEVEPTDFMISSVLSACAELG 324

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            L+ G  VH+L +K    ++I V +AL+D+Y KCG I +A   F ++ +   V+WNAMI 
Sbjct: 325 GLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIG 384

Query: 523 GYSMHGLSTEALNLFNKMQ--QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           GY+  G    AL LF +M       +P+ +T V +LS CS  G +++G  +F+SM  +Y 
Sbjct: 385 GYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYG 444

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           IEP  EH+ C+V LLGR G  D A + I  +P QP++ VW ALLGAC +    +LG+  A
Sbjct: 445 IEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLGACRMHGKTELGKIAA 504

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYF 700
           + + E+   D G HV+LSNM A A RW+    VRK MK  G+KK  G SW+  +  +H F
Sbjct: 505 EKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVF 564

Query: 701 SVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAF 760
              D+SH  N  I AML  L    ++AGYVPD N  L D+ED+EK   +W HSE++ALAF
Sbjct: 565 QAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAF 624

Query: 761 GLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           GL+ +P    IRI KNLRIC DCH+ IK IS +V REI+VRD +RFH F+ G CSC DYW
Sbjct: 625 GLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  224 bits (571), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 238/486 (48%), Gaps = 9/486 (1%)

Query: 50  LLQQAIQNRHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDASKLFDEMPLT 108
           LL+ A+       G+ +H  I++    PL  F  N L+N Y + D L+ A  +     L 
Sbjct: 12  LLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLR 71

Query: 109 NTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIH 168
             +++ +L  GC  + +F  AL     + ++  + N F    + K    M +P     IH
Sbjct: 72  TVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIH 131

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
               K G   D FVG S  D Y   G    A  +FD +  +++ +W   +    ++    
Sbjct: 132 GLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSL 191

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           + +  F +   +   PN+ T  A L +C+ +    +G+ +H   ++  Y +D+ V   L+
Sbjct: 192 DVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLI 251

Query: 289 ELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNN 347
           + Y K GDIV A++ F  +  +K+V+ W  M+    Q+   + A  +F  +R+  V P +
Sbjct: 252 DFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRK-EVEPTD 310

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
           F  +SVL ACA    L LG+ +H+  +K  +  N+FV +AL+D+Y KCG IEN+  +F E
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSE 370

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI--GNDMQPTEVTFSSVLRACAGFAALD 465
            PE N VTWN MI GY   GD + A+ LF  M      ++P+ VT  S+L  C+   A++
Sbjct: 371 LPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVE 430

Query: 466 PGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMIC 522
            G+Q+   +++  Y  +    +   ++D+  + G ++ A      M  +  +S W A++ 
Sbjct: 431 RGIQIFE-SMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLG 489

Query: 523 GYSMHG 528
              MHG
Sbjct: 490 ACRMHG 495



 Score = 94.0 bits (232), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           +S ++ A L   +     N G+QLH  I++ G   D+   N L++FY +   +  A  +F
Sbjct: 208 NSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVF 267

Query: 103 DEMP-LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
             +    N +S+ ++     ++H+ + A  V L++ KE  E   F+ ++++     +   
Sbjct: 268 SRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRKEV-EPTDFMISSVLSACAELGGL 326

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++HA   K   + + FVG++L+D Y  CG+++ A QVF  +   ++V+W  M+G Y
Sbjct: 327 ELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGY 386

Query: 222 AENCFYEESLQLFCQMRV--MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           A     + +L+LF +M +   G RP+  T+ + L  C  + A   G  +   +++  Y  
Sbjct: 387 AHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFE-SMRLNY-- 443

Query: 280 DLYVGTE----LLELYAKSGDIVDAQLFFEEMPKKDVIP-WSLMIA 320
            +  G E    +++L  +SG +  A  F + MP +  I  W  ++ 
Sbjct: 444 GIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLG 489


>Medtr8g105720.1 | PPR containing plant-like protein | HC |
           chr8:44583313-44585824 | 20130731
          Length = 701

 Score =  490 bits (1261), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 239/625 (38%), Positives = 378/625 (60%), Gaps = 17/625 (2%)

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           +W+ ++ CY  +     S   F  MR +   PN +   + LK+   L+   +  S+H C 
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 273 LKACYDQDLYVGTELLELYAK---SGDIVDA------------QLFFEEMPKKDVIPWSL 317
           ++   D DLY+   L+  YAK   +G + D             +  F+ MP +DV+ W+ 
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 318 MIARYAQSDRSKEALELFHCM-RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV 376
           +IA +AQ+    EAL++   M +   + P++FT +S+L   A  V +  GK+IH   ++ 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 377 GLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLF 436
           G D +VF+ ++L+D+YAKC  +E S+  F   P ++ ++WN++I G VQ G+ ++ +  F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 437 SSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
             M+  +++P  V+FSSV+ ACA   AL  G Q+H   ++  ++++  +A++L+DMYAKC
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
           G I  AR  FD++DKR+ V+W A+I G +MHG + +A++LF  M +   +P  + F+ VL
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 557 SACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEI-PFQP 615
           +ACS+AGL+D+G   F SM +D+ I P +EHY  +  LLGR G+ +EA   I  +   QP
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496

Query: 616 SVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRK 675
           +  VW  LL AC   K+++L       +L +   + G +VL+SN+Y+ A+RW + A +R 
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556

Query: 676 NMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNA 735
           +M++KG+KK P  SW+E    VH F  GD SHP    I   L+ L ++    GYV D N 
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616

Query: 736 VLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQ 795
           VL DV+++ K   L  HSERLA+A+G++   +  +IR++KN+R+C DCHT IK I+++V 
Sbjct: 617 VLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVG 676

Query: 796 REIVVRDINRFHHFQHGVCSCGDYW 820
           REI VRD +RFHHF++G CSCGDYW
Sbjct: 677 REITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  153 bits (387), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 191/401 (47%), Gaps = 19/401 (4%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQF-------- 92
           P + H + +LL+ +   +H      LH   ++ G   DL+  N L+N Y +F        
Sbjct: 107 PPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFD 166

Query: 93  -------DCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGH-EVN 144
                    +D   K+FD MP+ + +S+ T+  G +++  +  AL ++  + K G  + +
Sbjct: 167 VFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPD 226

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD 204
            F  ++I+ +       +    IH    + G   D F+G+SLID Y+ C  ++ + + F 
Sbjct: 227 SFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFY 286

Query: 205 GIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV 264
            +  KD +SW  ++    +N  ++  L  F +M     +P   + ++ + +C  L A  +
Sbjct: 287 ILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSL 346

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           G+ +HGC ++  +D + ++ + L+++YAK G+I  A+  F+ + K+D++ W+ +I   A 
Sbjct: 347 GRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAM 406

Query: 325 SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILG-KQIHSNVLKVGLDSNVF 383
              + +A+ LF  M +  V P    F +VL AC+   L+  G +  +S     G+   + 
Sbjct: 407 HGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLE 466

Query: 384 VSNALMDVYAKCGEIENS--MILFMESPEQNEVTWNTMIVG 422
              A+ D+  + G +E +   I  M   +     W+ ++  
Sbjct: 467 HYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAA 507


>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:34908078-34912174 | 20130731
          Length = 1099

 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 269/763 (35%), Positives = 423/763 (55%), Gaps = 9/763 (1%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           NA K+LH  +L  G   ++     L+N YV    +  +   FD +   N  S+ ++    
Sbjct: 36  NATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAY 95

Query: 121 SRSHQFDHALHVILRLFK--EGHEVNP--FVCTTIIKLLVSMDLPHVCWTIHACVYKRGH 176
            R  ++  A++ + +LF    G  + P  +    I+K  VS+        +H CV+K G 
Sbjct: 96  VRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK---KVHCCVFKMGF 152

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           + D FV  SL+  YS  G +D A +VF  +  KD+ SW  M+  + +N     +L +  +
Sbjct: 153 EDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNR 212

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           M+  G + +  T+ + L  C   +    G  +H   LK   D D++V   L+ +Y+K G 
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
           + DAQ+ F++M  +D++ W+ +IA Y Q++    AL  F  M+   + P+  T  S+   
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332

Query: 357 CAAQVLLILGKQIHSNVLKVG-LDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVT 415
            +      + + I   V++   LD +V + NAL+++YAK G +  +  +F + P ++ ++
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           WNT++ GY Q G   +A++ ++ M    D  P + T+ S++ A +   AL  G+++H+  
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
           IK     D+ VA  LID+Y KCGR+ DA   F ++ +   V WNA+I    +HG   EAL
Sbjct: 453 IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEAL 512

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
            LF  M     K + +TFV +LSACS++GL+D+GQ  F  M ++Y I+P ++HY CMV L
Sbjct: 513 QLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDL 572

Query: 595 LGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTH 654
           LGR G  ++A +L+  +P QP   +W ALL AC +  N +LG   +  +LE+   + G +
Sbjct: 573 LGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYY 632

Query: 655 VLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLIC 714
           VLLSN+YA  ++W+ V  VR   + +G++K PG S V        F  G+ +HP    I 
Sbjct: 633 VLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIY 692

Query: 715 AMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRIL 774
             L+ L+ K +  GYVPD + V  D+E+DEKE+ L  HSERLA+AFG++  P    IRI 
Sbjct: 693 KELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIF 752

Query: 775 KNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCG 817
           KNLR+C DCH   K IS + +REIVVRD NRFHHF+ G+CSC 
Sbjct: 753 KNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 183/393 (46%), Gaps = 4/393 (1%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +D+ + A++L    Q+     G  +H  +LK G   D+F  N L+N Y +F  L DA  +
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD+M + + +S+ ++     +++    AL     +   G   +     ++  +   +   
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339

Query: 162 HVCWTIHACVYKRGH-QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            +  +I   V +R     D  +G +L++ Y+  G ++ A  VFD +  KD +SW  +V  
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399

Query: 221 YAENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           Y +N    E++  +  M       PN  T  + + +   + A   G  +H   +K     
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           D++V T L++LY K G + DA   F E+P+   +PW+ +IA      R +EAL+LF  M 
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML 519

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEI 398
              V  ++ TF S+L AC+   L+  G++    + K  G+  ++     ++D+  + G +
Sbjct: 520 AERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYL 579

Query: 399 ENSMILFMESPEQNEVT-WNTMIVGYVQLGDGE 430
           E +  L    P Q + + W  ++      G+ E
Sbjct: 580 EKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612


>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr3:9292413-9288471 | 20130731
          Length = 1125

 Score =  489 bits (1259), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/763 (34%), Positives = 421/763 (55%), Gaps = 11/763 (1%)

Query: 63   GKQLHCDILKRGAPLD-LFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
            G Q+  D++K G     +   N L++ +  +D +++AS++F+ M   +TIS+ ++    +
Sbjct: 369  GYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASA 428

Query: 122  RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLPHVCWT--IHACVYKRGHQA 178
             + +F+ +L     + +  H    ++  TI  LL +     H+ W   +H  + K G ++
Sbjct: 429  HNGRFEESLGHFFWM-RRTHPKTDYI--TISALLPACGSAQHLKWGRGLHGLITKSGLES 485

Query: 179  DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
            +  V  SL+  Y+  G+ + A  VF  +  +D++SW  M+  + E+  Y  ++ L  +M 
Sbjct: 486  NVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEML 545

Query: 239  VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
                  N  T T AL +C  LE     K VH   +      +L +G  L+ +Y K G + 
Sbjct: 546  KTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMD 602

Query: 299  DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC- 357
            +AQ   + MP++DV+ W+ +I  +A        ++ F+ MR+  ++ N  T  ++L  C 
Sbjct: 603  EAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCM 662

Query: 358  AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWN 417
            +   LL  G  IH++++  G + + +V ++L+ +YA+CG++  S  +F     +N  TWN
Sbjct: 663  SPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWN 722

Query: 418  TMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
             +       G GE+A+   + M  + +   + +FS  L        LD G Q+HS  IK 
Sbjct: 723  AIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKL 782

Query: 478  RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
             +  D  V NA +DMY KCG I+D          R + SWN +I   + HG   +A   F
Sbjct: 783  GFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAF 842

Query: 538  NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGR 597
            ++M     KP+ +TFV +LSACS+ GL+D+G   F SM+ ++ +   IEH  C++ LLGR
Sbjct: 843  HEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGR 902

Query: 598  LGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLL 657
             G+  EA   I ++P  P+  VWR+LL AC V  N++LGR  A  + E+   DD  +VL 
Sbjct: 903  SGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLY 962

Query: 658  SNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAML 717
            SN+ A  +RW +V +VRK M+ + +KK+P  SW++ +  V  F +GD  HP +  I A L
Sbjct: 963  SNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKL 1022

Query: 718  EWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNL 777
            E L K TR+ G++PD +  L D ++++KE +LW HSER+ALAFGL+       +RI KNL
Sbjct: 1023 EELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNL 1082

Query: 778  RICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            R+C DCH+V KL+S++V R+IVVRD  RFHHF  G CSC DYW
Sbjct: 1083 RVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  227 bits (578), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 255/512 (49%), Gaps = 13/512 (2%)

Query: 118 QGCSRSHQF-DHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGH 176
           + C + ++F  + +H  +R     +  NP V   + K    +   +V   +HA   K   
Sbjct: 124 ETCVKENEFLSYGIHTFIR-----NHSNPQVSRFLQKGFSEISEGNVGKALHALCVKDVI 178

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           Q + F   +L++ YS  G++  A+ VFD ++ ++  SW  M+  +    +Y +++Q FC 
Sbjct: 179 QQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCH 238

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVG-KSVHGCALKACYDQDLYVGTELLELYAKSG 295
           M   G  P++Y I + + +C        G + +HG  +K     +++VGT LL  Y   G
Sbjct: 239 MFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHG 298

Query: 296 DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQ 355
            + +A   FEE+ + +++ W+ ++  YA +  +KE L ++  +R + ++    T A+V++
Sbjct: 299 SVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358

Query: 356 ACAAQVLLILGKQIHSNVLKVGLD-SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
            C       +G QI  +V+K GLD S+V V+N+L+ ++     +E +  +F    E++ +
Sbjct: 359 TCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTI 418

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           +WN++I      G  E+++  F  M     +   +T S++L AC     L  G  +H L 
Sbjct: 419 SWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLI 478

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
            K+   +++ V N+L+ MYA+ G   DA L F  M  R+ +SWN+M+  +   G  + A+
Sbjct: 479 TKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAI 538

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
            L  +M +T    N +TF   LSAC N   L    +     +  +N+         +V +
Sbjct: 539 LLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIG----NTLVTM 594

Query: 595 LGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            G+ G  DEA K+   +P +  V+ W AL+G 
Sbjct: 595 YGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625



 Score =  221 bits (564), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 251/509 (49%), Gaps = 5/509 (0%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           N GK LH   +K     + F  N L+N Y +F  +  A  +FD+M   N  S+  +  G 
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLL-VSMDLPHVCWTIHACVYKRGHQAD 179
            R   +  A+     +F+ G   + +V  +++     S  +      IH  V K G  ++
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSN 283

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
            FVGTSL+  Y   G+V  A ++F+ I   ++VSWT ++ CYA+N   +E L ++  +R 
Sbjct: 284 VFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRH 343

Query: 240 MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD-QDLYVGTELLELYAKSGDIV 298
            G      T+   +++C       +G  + G  +K+  D   + V   L+ ++     + 
Sbjct: 344 NGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVE 403

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
           +A   F  M ++D I W+ +I   A + R +E+L  F  MR++    +  T +++L AC 
Sbjct: 404 EASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACG 463

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
           +   L  G+ +H  + K GL+SNV V N+L+ +YA+ G  E++ ++F   P ++ ++WN+
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNS 523

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
           M+  +V+ G    A+ L   M+        VTF++ L AC     L     VH+  I   
Sbjct: 524 MMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFA 580

Query: 479 YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
            ++++ + N L+ MY K G +++A+     M +R+ V+WNA+I G++        +  FN
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFN 640

Query: 539 KMQQTNCKPNKLTFVGVLSACSNAGLLDK 567
            M++     N +T V +L  C +   L K
Sbjct: 641 LMRREGLLSNYITIVNLLGTCMSPDYLLK 669



 Score =  192 bits (489), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 240/494 (48%), Gaps = 8/494 (1%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
            P  D  + +ALL      +H   G+ LH  I K G   ++   N LL+ Y Q    +DA
Sbjct: 447 HPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDA 506

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
             +F  MP  + IS+ ++        ++ HA+ +++ + K    +N    TT +    ++
Sbjct: 507 ELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL 566

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
           +   +   +HA V       +  +G +L+  Y   G +D A++V   +  +D+V+W  ++
Sbjct: 567 EKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALI 623

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLE-AFGVGKSVHGCALKACY 277
           G +A++     ++Q F  MR  G   N  TI   L +C+  +     G  +H   + A +
Sbjct: 624 GGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGF 683

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           + D YV + L+ +YA+ GD+  +   F+ +  K+   W+ + +  A     +EAL+    
Sbjct: 684 ELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIAR 743

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           MR   V  + F+F+  L       +L  G+Q+HS ++K+G + + +V NA MD+Y KCGE
Sbjct: 744 MRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGE 803

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           I++   +      +++ +WN +I    + G   +A   F  M+   ++P  VTF S+L A
Sbjct: 804 IDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSA 863

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMD-KREE 514
           C+    +D GL V+  ++ + +    A+ +   +ID+  + GR+ +A    DKM     E
Sbjct: 864 CSHGGLVDEGL-VYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNE 922

Query: 515 VSWNAMICGYSMHG 528
             W +++    +HG
Sbjct: 923 FVWRSLLAACKVHG 936


>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:14398657-14402125 | 20130731
          Length = 960

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 277/811 (34%), Positives = 437/811 (53%), Gaps = 78/811 (9%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPL--TNTISFVTLAQGCSR----SHQFDHALH 131
           ++F  N ++   V    + DA KLFDEMP+   +++S+ T+  G S+    S  F+    
Sbjct: 73  NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132

Query: 132 VILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYS 191
           +I      G   +PF  T+++K   S+    +   +HA V K G   +  +  S++  Y 
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYV 192

Query: 192 VCGNVDAARQVF-----DGIFC--------------------------KDMVSWTGMVGC 220
            CG+VD A  VF       +FC                          +D VSW  ++  
Sbjct: 193 KCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISI 252

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           ++++ F  + L +F +M   G+ PN  T  + L +C        G  +H   L+  +  D
Sbjct: 253 FSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLD 312

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           L  G  L+++YAK G +  A+  F+ + + D I W+ +I         ++AL LF+ MR+
Sbjct: 313 LVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRR 372

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
           SSVV + F   ++L  C+       G+ +H   +K G+ S+  V NA++ +YAKCG+ + 
Sbjct: 373 SSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDK 432

Query: 401 SMILFM-------------------------------ESPEQNEVTWNTMIVGYVQLGDG 429
           + ++F                                  PE+N VTWN+M+  YVQ G  
Sbjct: 433 ADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFS 492

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANAL 489
           E+ + L+ SM  N +QP  +TF++ +RACA  A +  G+QV +   K   + +++VAN++
Sbjct: 493 EEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSI 552

Query: 490 IDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNK 549
           + MY++CG I +A+ TFD +D ++ +SWNAM+  ++ +GL  + ++ F  M +T CKPN 
Sbjct: 553 VTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNH 612

Query: 550 LTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIG 609
           +++V VLS CS+ GL+ +G+  F SM++ + I P  EH++CMV LLGR G  ++A  LI 
Sbjct: 613 ISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIE 672

Query: 610 EIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDN 669
            +PF+P+  VW ALLG+C V  ++ L    A+ ++E+       +VLLSNMY+ +   DN
Sbjct: 673 GMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDN 732

Query: 670 VASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAG- 728
           VA +RK MK KG++   G SW+E    VH F+V +TSHP  K +   LE + K   D G 
Sbjct: 733 VADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGK 792

Query: 729 YVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIK 788
           Y+   ++V          R    HSE+LA AFGLL +PS   I ++KNLR+C DCH VIK
Sbjct: 793 YITVESSV---------HRSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIK 843

Query: 789 LISEVVQREIVVRDINRFHHFQHGVCSCGDY 819
           L+S V  RE+++RD  RFHHF+ G+CSC DY
Sbjct: 844 LLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  194 bits (492), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 230/524 (43%), Gaps = 70/524 (13%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDG--IFCKDMVSWTGMVGCYAENCFYE 228
           V++  H  + F   ++I A      +  A ++FD   +  KD VSWT M+  Y++N F+ 
Sbjct: 65  VFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHS 124

Query: 229 ESLQLFCQM----RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
            S + F  M       G   + ++ T+ +K+C  L    +   +H    K  +  +  + 
Sbjct: 125 RSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQ 184

Query: 285 TELLELYAKSGDIVDAQ----------LF---------------------FEEMPKKDVI 313
             ++ +Y K GD+  A+          LF                     F  MP++D +
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ +I+ ++Q     + L +F  M      PN  T+ SVL ACA+   L  G  +H+ +
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           L++    ++   N L+D+YAKCG ++ +  +F    E + ++WN++I G V  G GE A+
Sbjct: 305 LRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDAL 364

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
            LF+ M  + +   E    ++L  C+G      G  +H  TIK+   +   V NA+I MY
Sbjct: 365 ILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMY 424

Query: 494 AKC-------------------------------GRINDARLTFDKMDKREEVSWNAMIC 522
           AKC                               G I  AR  FD M +R  V+WN+M+ 
Sbjct: 425 AKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLS 484

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
            Y  +G S E L L+  M+    +P+ +TF   + AC++  ++  G  +    ++ + + 
Sbjct: 485 TYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLS 543

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
             +     +V +  R G   EA      I     ++ W A+L A
Sbjct: 544 LNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586



 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 33/408 (8%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +Y ++L           G  LH  IL+    LDL   N L++ Y +  CLD A ++F  +
Sbjct: 280 TYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSL 339

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
              + IS+ +L  G       + AL +  ++ +    ++ F+  TI+ +    D      
Sbjct: 340 REHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGE 399

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV------- 218
            +H    K G  + A VG ++I  Y+ CG+ D A  VF  +  ++ +SWT M+       
Sbjct: 400 LLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSG 459

Query: 219 ------------------------GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALK 254
                                     Y +N F EE L+L+  MR  G +P+  T T +++
Sbjct: 460 DIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIR 519

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP 314
           +C  L    +G  V   A K     ++ V   ++ +Y++ G I +A+  F+ +  KD+I 
Sbjct: 520 ACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLIS 579

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           W+ M+A +AQ+    + ++ F  M ++   PN+ ++ SVL  C+   L+  GK    ++ 
Sbjct: 580 WNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMT 639

Query: 375 KV-GLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
           +V G+       + ++D+  + G +E +  L    P + N   W+ ++
Sbjct: 640 RVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687


>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:13515619-13513589 | 20130731
          Length = 676

 Score =  487 bits (1253), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/657 (38%), Positives = 386/657 (58%), Gaps = 4/657 (0%)

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           ++H  + K G    +F G  LID Y  C  +  AR++FD +  + +V+W  M+  +    
Sbjct: 22  SLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRG 80

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD-QDLYVG 284
             +E+++L+  M   G  P+ YT +A  K+   +     G+  HG A+   ++  D +V 
Sbjct: 81  KTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVA 140

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           T ++++YAK G + DA+  F+ +  KDV+ ++ +I  Y Q     EALE+F  M  S + 
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIK 200

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           PN +T ASVL +C     L+ GK IH  V+K GL+S V    +L+ +Y+KC  +E+S+ +
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F      + VTW + IVG VQ G  E A+++F  MI   + P   TFSS+L AC+  A L
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAML 320

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
           + G Q+H++T+K   + +  V  ALI +Y KCG +  AR  F+ + + + VS N MI  Y
Sbjct: 321 EAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAY 380

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC 584
           + +G   EAL LF +M++   KPN +TF+ +L AC+NAGL+++G  +F  +  +++IE  
Sbjct: 381 AQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
            +HYTCM+ LLGR  +F+EA  LI E    P V+ WR LL AC +   +++     + +L
Sbjct: 441 RDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKML 499

Query: 645 EMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGD 704
           +  P D GTH+LL+N+YA A +WDNV  ++   +   +KK P +SWV+    VH F  GD
Sbjct: 500 DQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGD 559

Query: 705 TSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLR 764
            SHP    I  ML  L +K    GY PD   VL D+E+++K   L+ HSE+LA+AF L +
Sbjct: 560 LSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWK 619

Query: 765 I-PSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
                 +IRI KNLR+C DCH+ IK +S +  R+I+ RD  RFHHF+ G+CSC DYW
Sbjct: 620 TCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  238 bits (607), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 245/499 (49%), Gaps = 9/499 (1%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           Y +L+ Q    +     K LH  ILK G+    F H  L++ Y++   + +A KLFDEMP
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSFFGHK-LIDGYIKCSVITEARKLFDEMP 62

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWT 166
             + +++ ++        +   A+ +   +  EG   + +  + I K    M +      
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 167 IHACVYKRGHQ-ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            H      G + +D FV T ++D Y+  G +  AR VFD +  KD+V +T ++  Y +  
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRG 182

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
              E+L++F  M     +PN YT+ + L SC  L     GK +HG  +K+  +  +   T
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQT 242

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            LL +Y+K   + D+   F  +     + W+  I    Q+ R + AL +F  M + S+ P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISP 302

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N+FTF+S+L AC++  +L  G+QIH+  +K+G+D N +V  AL+ +Y KCG +E +  +F
Sbjct: 303 NHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVF 362

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
               E + V+ NTMI  Y Q G G +A+ LF  M     +P  VTF S+L AC     ++
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVE 422

Query: 466 PGLQVHSLTIKTRYNNDIAVA----NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            G Q+ SL    R N+ I +       +ID+  +  R  +A +  ++    + + W  ++
Sbjct: 423 EGCQIFSL---IRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLL 479

Query: 522 CGYSMHGLSTEALNLFNKM 540
               +HG    A     KM
Sbjct: 480 NACKIHGEVEMAEKFMKKM 498


>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:453448-455881 | 20130731
          Length = 668

 Score =  486 bits (1250), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/582 (43%), Positives = 355/582 (60%), Gaps = 5/582 (0%)

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
            P+       LK C  L     GK VH   + + +  DL +   +L +YAK G +  A+ 
Sbjct: 88  EPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQ 147

Query: 303 FFEEMPKKDVIPWSLMIARYAQ---SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
            F+EM  KDV+ W+ MI  Y+Q   +  +  AL LF  M +  + PN F  +S+++ C  
Sbjct: 148 VFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGF 207

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
               + GKQIH    K G   NVFV ++L+D+YA+CGE+  S ++F E   +NEV+WN +
Sbjct: 208 LGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNAL 267

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           I G+ + G+GE+A+ LF  M       TE T+S++L + +   +L+ G  +H+  +K+  
Sbjct: 268 ISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGK 327

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
                V N L+ MYAK G I DA+  FD++ K + VS N+M+ GY+ HGL  EA+ LF +
Sbjct: 328 KLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEE 387

Query: 540 MQ-QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRL 598
           M      +PN +TF+ VL+ACS+AGLLD+G   F+ M + Y +EP + HYT +V L GR 
Sbjct: 388 MMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRA 446

Query: 599 GKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLS 658
           G  D+A   I E+P +P+  +W ALLGA  + KN ++G + AQ VLE+ P   G H LLS
Sbjct: 447 GLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLS 506

Query: 659 NMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLE 718
           N+YA A +W +VA VRK MK  G+KKEP  SWVE +  VH FS  D SHP    +  M E
Sbjct: 507 NIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWE 566

Query: 719 WLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLR 778
            LN+K ++ GYVPD + V + V+  EKE +L  HSE+LALAF LL       IRI+KN+R
Sbjct: 567 NLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIR 626

Query: 779 ICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           +C DCH+ IK +S VV+REI+VRD NRFHHF+ G CSC DYW
Sbjct: 627 VCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  199 bits (507), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 209/366 (57%), Gaps = 5/366 (1%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H  +     + D  +  S++  Y+ CG+++ ARQVFD +  KD+V+WT M+  Y+++ +
Sbjct: 113 VHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGY 172

Query: 227 YEES---LQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
              +   L LF +M   G RPN + +++ +K C  L +   GK +HGC  K  + ++++V
Sbjct: 173 ASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFV 232

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
           G+ L+++YA+ G++ +++L F+E+  K+ + W+ +I+ +A+    +EAL LF  M++   
Sbjct: 233 GSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGF 292

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
               FT++++L + +    L  GK +H++++K G     +V N L+ +YAK G I ++  
Sbjct: 293 GATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKK 352

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS-MIGNDMQPTEVTFSSVLRACAGFA 462
           +F    + + V+ N+M++GY Q G G++A+ LF   M+  +++P ++TF SVL AC+   
Sbjct: 353 VFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAG 412

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMI 521
            LD GL    L  K      ++    ++D++ + G ++ A+   ++M      + W A++
Sbjct: 413 LLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472

Query: 522 CGYSMH 527
               MH
Sbjct: 473 GASKMH 478



 Score =  155 bits (392), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 143/260 (55%), Gaps = 3/260 (1%)

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           + R + +  S   L +   +   S+ P+   +  +L+ C     L  GK +H++++    
Sbjct: 63  LLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKF 122

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG---DGEKAMNL 435
            +++ + N+++ +YAKCG +E +  +F E   ++ VTW +MI GY Q G       A+ L
Sbjct: 123 RNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVL 182

Query: 436 FSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
           F  M+ + ++P E   SS+++ C    +   G Q+H    K  +  ++ V ++L+DMYA+
Sbjct: 183 FLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYAR 242

Query: 496 CGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGV 555
           CG + ++RL FD+++ + EVSWNA+I G++  G   EAL LF KMQ+      + T+  +
Sbjct: 243 CGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSAL 302

Query: 556 LSACSNAGLLDKGQSLFKSM 575
           L + S  G L++G+ L   M
Sbjct: 303 LCSSSTTGSLEQGKWLHAHM 322



 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 166/360 (46%), Gaps = 20/360 (5%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GKQ+H    K G   ++F  + L++ Y +   L ++  +FDE+   N +S+  L  G +R
Sbjct: 214 GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFAR 273

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTII-KLLVSMDLPHVCWTIHACVYKRGHQADAF 181
             + + AL + +++ +EG     F  + ++     +  L    W +HA + K G +   +
Sbjct: 274 KGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKW-LHAHMMKSGKKLVGY 332

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV-M 240
           VG +L+  Y+  GN+  A++VFD +   D+VS   M+  YA++   +E+++LF +M + +
Sbjct: 333 VGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWV 392

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
              PN+ T  + L +C        G        K   +  L   T +++L+ ++G +  A
Sbjct: 393 EIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQA 452

Query: 301 QLFFEEMP-KKDVIPW-SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
           + F EEMP + +   W +L+ A     +    A      +      P   T  S + A A
Sbjct: 453 KSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASA 512

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF----MESPEQNEV 414
            Q   +      + V K   DS +    A   V     EIENS+ +F    +  P++N+V
Sbjct: 513 GQWKDV------AKVRKEMKDSGLKKEPACSWV-----EIENSVHIFSANDISHPQKNKV 561



 Score = 86.7 bits (213), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 5/186 (2%)

Query: 444 MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDAR 503
           ++P    ++ +L+ C     L  G  VH+  + +++ ND+ + N+++ MYAKCG +  AR
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 504 LTFDKMDKREEVSWNAMICGYSMHGL---STEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
             FD+M  ++ V+W +MI GYS  G    +T AL LF +M +   +PN+     ++  C 
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
             G    G+ +       Y  +  +   + +V +  R G+  E+  +  E+  +  V  W
Sbjct: 207 FLGSCVDGKQI-HGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEV-SW 264

Query: 621 RALLGA 626
            AL+  
Sbjct: 265 NALISG 270


>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:45164389-45168068 | 20130731
          Length = 766

 Score =  484 bits (1246), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/748 (36%), Positives = 413/748 (55%), Gaps = 34/748 (4%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           D+   N  ++ +++    D A  +F+ MP  +++S+  +  G  R+ +F+ A +    LF
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARN----LF 103

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHAC-VYKRGHQADAFVGTSLIDAYSVCGNV 196
            +  E + F    ++   V       C    A  ++    + D     SL+  Y+  G V
Sbjct: 104 DQMPERDLFSWNVMLTGYV-----RNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 197 DAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
           D AR+VFD +  K+ +SW G++  Y  N   EE+  LF          +++ + +   +C
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES-------KSDWDLISW--NC 209

Query: 257 LGLEAFGVGKSVHGCALKACYDQ----DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           L +  F V K   G A +  +D+    D      ++  YA+ G +  A+  F+E P +DV
Sbjct: 210 L-MGGF-VRKKKLGDA-RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV 266

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
             W+ M++ Y Q+    EA   F  M + + V  N   A  +Q     +   L + +   
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCR 326

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
                   N+   N ++  Y + G+I  +   F   P+++ V+W  +I GY Q G  E+A
Sbjct: 327 --------NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDM 492
           +N+F  +  +       TF   L  CA  AAL+ G Q+H   +K  Y     V NAL+ M
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTF 552
           Y KCG I++A  TF+ +++++ VSWN M+ GY+ HG   +AL +F  M+    KP+++T 
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498

Query: 553 VGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP 612
           VGVLSACS+ GLLD+G   F SM++DY + P  +HYTCM+ LLGR G+ +EA  LI  +P
Sbjct: 499 VGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMP 558

Query: 613 FQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVAS 672
           FQP    W ALLGA  +  N +LG   A+ V +M+P + G +VLLSN+YA + RW +   
Sbjct: 559 FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADK 618

Query: 673 VRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPD 732
           +R  M+  GV+K PG SWVE Q  +H FSVGD SHP+ + I A LE L+ K R+ GYV  
Sbjct: 619 MRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSL 678

Query: 733 CNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISE 792
              VL DVE++EKE  L  HSE+LA+AFG+L IP    IR++KNLR+C DCH+ IK IS+
Sbjct: 679 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISK 738

Query: 793 VVQREIVVRDINRFHHFQHGVCSCGDYW 820
           +V R I++RD +RFHHF  G CSCGDYW
Sbjct: 739 IVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  207 bits (526), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 246/537 (45%), Gaps = 48/537 (8%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P   S SY A++   ++N   N  + L   + +R    DLF+ N++L  YV+   L DA 
Sbjct: 76  PRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER----DLFSWNVMLTGYVRNCRLGDAR 131

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLV--- 156
           +LFD MP  + +S+ +L  G +++   D A  V    F    E N      ++   V   
Sbjct: 132 RLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREV----FDNMPEKNSISWNGLLAAYVHNG 187

Query: 157 -----------SMDLPHVCWTIHACVYKRGHQ-------------ADAFVGTSLIDAYSV 192
                        D   + W      + R  +              DA    ++I  Y+ 
Sbjct: 188 RIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQ 247

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G +  AR++FD    +D+ +WT MV  Y +N   +E+   F +M       N  +  A 
Sbjct: 248 GGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAM 303

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           +   +  +   + + +     ++   +++     ++  Y + GDI  A+ FF+ MP++D 
Sbjct: 304 IAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDC 359

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
           + W+ +IA YAQS   +EAL +F  ++Q     N  TF   L  CA    L LGKQIH  
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
            +K+G  +  FV NAL+ +Y KCG I+ +   F    E++ V+WNTM+ GY + G G +A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALID 491
           + +F SM    ++P E+T   VL AC+    LD G +  +S+T              +ID
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539

Query: 492 MYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHG---LSTEALNLFNKMQQTN 544
           +  + GR+ +A+     M  +    SW A++    +HG   L  +A  +  KM+  N
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596



 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 159/351 (45%), Gaps = 30/351 (8%)

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           D D+    + +  + ++G    A   F  MP++  + ++ MI+ Y ++ +   A  LF  
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M +  +   N      ++ C       LG      +  +  + +V   N+L+  YA+ G 
Sbjct: 106 MPERDLFSWNVMLTGYVRNCR------LGDA--RRLFDLMPEKDVVSWNSLLSGYAQNGY 157

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           ++ +  +F   PE+N ++WN ++  YV  G  E+A  LF S    D+    ++++ ++  
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCLM-- 211

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSW 517
             GF           L  K    + I+  N +I  YA+ G ++ AR  FD+   R+  +W
Sbjct: 212 -GGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269

Query: 518 NAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
            AM+ GY  +G+  EA   F++M +     N++++  +++       +D  + LF+SM  
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDIARELFESM-- 323

Query: 578 DYNIEPC--IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
                PC  I  +  M+   G++G   +A K    +P Q   + W A++  
Sbjct: 324 -----PCRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG 368



 Score = 76.6 bits (187), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 43/287 (14%)

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
           D ++   N  +  + + G  ++++ +F   P ++ V++N MI GY++      A NLF  
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGR 498
           M   D+    V  +  +R C     L    ++  L  +     D+   N+L+  YA+ G 
Sbjct: 106 MPERDLFSWNVMLTGYVRNC----RLGDARRLFDLMPE----KDVVSWNSLLSGYAQNGY 157

Query: 499 INDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK-----MQQTNC------KP 547
           +++AR  FD M ++  +SWN ++  Y  +G   EA  LF       +   NC      + 
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK 217

Query: 548 NKL----------------TFVGVLSACSNAGLLDKGQSLF-KSMSQDYNIEPCIEHYTC 590
            KL                ++  ++S  +  G L + + LF +S ++D      +  +T 
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRD------VFTWTA 271

Query: 591 MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGR 637
           MV    + G  DEA     E+P +  V  + A++   V  K +D+ R
Sbjct: 272 MVSGYVQNGMLDEAKTFFDEMPEKNEV-SYNAMIAGYVQTKKMDIAR 317


>Medtr4g113830.1 | organelle transcript processing protein, putative
           | HC | chr4:46849211-46846995 | 20130731
          Length = 738

 Score =  483 bits (1244), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/692 (39%), Positives = 400/692 (57%), Gaps = 38/692 (5%)

Query: 167 IHACVYKRGHQADAFVGTSLID--AYSVCGNVDAARQVFD---GIFCKDMVSWTGMVGCY 221
           IH+ + K G     FV + LI   A S  G++  A  +F+        ++  W  ++  Y
Sbjct: 47  IHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGY 106

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           + +     SL LF +M   G +PN++T     KSC   +A   GK +H  ALK     + 
Sbjct: 107 SLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNP 166

Query: 282 YVGTELLELYAKSGD-------------------------------IVDAQLFFEEMPKK 310
           +V T ++ +YA  G+                               + DA+  F+E+P K
Sbjct: 167 HVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVK 226

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
           DV+ W+ MI+ Y QS R +EA+  F+ M++++V+PN  T   VL AC       LGK I 
Sbjct: 227 DVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIG 286

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGE 430
           S V   G  SN+ ++NAL+D+Y KCGE + +  LF    E++ ++WNTMI GY  L   E
Sbjct: 287 SWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYE 346

Query: 431 KAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT-RYNNDIAVANAL 489
           +A+ LF  M+ ++++P +VTF  +L ACA   ALD G  VH+   K  R +++ ++  +L
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSL 406

Query: 490 IDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC-KPN 548
           IDMYAKCG I  A   F  M  R   SWNAM+ G++MHG +  AL LF++M      +P+
Sbjct: 407 IDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPD 466

Query: 549 KLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLI 608
            +TFVGVLSAC+ AGL+D G   F+SM QDY I P ++HY CM+ LL R  KF+EA  L+
Sbjct: 467 DITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILM 526

Query: 609 GEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWD 668
             +  +P   +W +LL AC     ++ G + A+ + +++P + G  VLLSN+YA A RWD
Sbjct: 527 KNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWD 586

Query: 669 NVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAG 728
           +VA +R  +  KG+KK PG + +E  G VH F VGD  HP+   I  ML  ++K   + G
Sbjct: 587 DVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENG 646

Query: 729 YVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIK 788
           +VP+ + VL D++++ KE  L  HSE+LA++FGL++     +IRI+KNLR+C +CH+  K
Sbjct: 647 FVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATK 706

Query: 789 LISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           LIS++  REI+ RD NRFHHF+ G CSC D W
Sbjct: 707 LISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  192 bits (489), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 211/427 (49%), Gaps = 14/427 (3%)

Query: 109 NTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS---MDLPHVCW 165
           N+ +F  L + C+++        +     K     NP V T++I +  S   MD   +  
Sbjct: 130 NSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARL-- 187

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
                V+ +    DA   T+LI  Y   G +D AR++FD I  KD+VSW  M+  Y ++ 
Sbjct: 188 -----VFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSG 242

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
            +EE++  F +M+     PN  T+   L +C    +  +GK +        +  +L +  
Sbjct: 243 RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTN 302

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            L+++Y K G+   A+  F+ + +KDVI W+ MI  Y+     +EAL LF  M +S+V P
Sbjct: 303 ALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKP 362

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           N+ TF  +L ACA    L LGK +H+ + K +   SN  +  +L+D+YAKCG IE +  +
Sbjct: 363 NDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERV 422

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDM-QPTEVTFSSVLRACAGFAA 463
           F     +N  +WN M+ G+   G  E+A+ LFS M+   + +P ++TF  VL AC     
Sbjct: 423 FRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGL 482

Query: 464 LDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMI 521
           +D G Q   S+      +  +     +ID+ A+  +  +A +    M+   + + W +++
Sbjct: 483 VDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLL 542

Query: 522 CGYSMHG 528
                HG
Sbjct: 543 SACKAHG 549



 Score =  171 bits (433), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 208/455 (45%), Gaps = 74/455 (16%)

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYA--KSGDIVDAQLFFEEMP-- 308
           L+ C  +  F   K +H   +K   +  ++V ++L+   A   SGD+  A   FEE    
Sbjct: 35  LEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91

Query: 309 -KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
            K +V  W+ +I  Y+ S     +L LF  M    V PN+ TF  + ++C        GK
Sbjct: 92  HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGK 151

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGE------------------------------ 397
           Q+H++ LK+ L  N  V  +++ +YA  GE                              
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211

Query: 398 -IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
            ++++  LF E P ++ V+WN MI GYVQ G  E+A+  F  M   ++ P + T   VL 
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS 516
           AC    + + G  + S      + +++ + NALIDMY KCG  + AR  FD +++++ +S
Sbjct: 272 ACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVIS 331

Query: 517 WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ------- 569
           WN MI GYS   L  EAL LF  M ++N KPN +TF+G+L AC+  G LD G+       
Sbjct: 332 WNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYID 391

Query: 570 ---------SLFKSMSQDYNIEPCIE---------------HYTCMVGLLGRLGKFDEAV 605
                    SL+ S+   Y    CIE                +  M+      G  + A+
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERAL 451

Query: 606 KLIGEIP----FQPSVMVWRALLGACVVQKNIDLG 636
            L  E+     F+P  + +  +L AC     +DLG
Sbjct: 452 ALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLG 486



 Score =  157 bits (396), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 220/523 (42%), Gaps = 102/523 (19%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILK-------------------------- 72
           QP  +SH++  L +   + +  + GKQLH   LK                          
Sbjct: 128 QP--NSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFA 185

Query: 73  -----RGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFD 127
                + +  D  +   L+  YV   CLDDA +LFDE+P+ + +S+  +  G  +S +F+
Sbjct: 186 RLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFE 245

Query: 128 HALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT--- 184
            A    +  F E  E N     + + +++S           AC + R  +   ++G+   
Sbjct: 246 EA----IVCFYEMQEANVLPNKSTMVVVLS-----------ACGHTRSGELGKWIGSWVR 290

Query: 185 ------------SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQ 232
                       +LID Y  CG  D AR++FDGI  KD++SW  M+G Y+    YEE+L 
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350

Query: 233 LFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD-QDLYVGTELLELY 291
           LF  M     +PN+ T    L +C  L A  +GK VH    K   +  +  + T L+++Y
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV-PNNFTF 350
           AK G I  A+  F  M  +++  W+ M++ +A    ++ AL LF  M    +  P++ TF
Sbjct: 411 AKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITF 470

Query: 351 ASVLQACAAQVLLILGKQ-IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
             VL AC    L+ LG Q   S +   G+   +     ++D+ A+  + E + IL     
Sbjct: 471 VGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL----- 525

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
                                        M   +M+P    + S+L AC     ++ G  
Sbjct: 526 -----------------------------MKNMEMEPDGAIWGSLLSACKAHGRVEFGEY 556

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRIND-ARLTFDKMDK 511
           V     +    N  A    L ++YA  GR +D AR+     DK
Sbjct: 557 VAERLFQLEPENAGAFV-LLSNIYAGAGRWDDVARIRTRLNDK 598


>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:46998568-47001126 | 20130731
          Length = 782

 Score =  483 bits (1243), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/786 (34%), Positives = 413/786 (52%), Gaps = 78/786 (9%)

Query: 104 EMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLL---VSMDL 160
           E P ++T  FV L Q   +S        +  R+ K G  ++ F+   ++       S + 
Sbjct: 6   ETPKSDT--FVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFND 63

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            H        ++    Q   F   +L+ +Y+  GN++ AR++FD I   D VSWT M+  
Sbjct: 64  AHR-------LFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVG 116

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y +   +  ++  F QM   G  P  +T T  L SC+   +  +GK VH   +K      
Sbjct: 117 YNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGV 176

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM-- 338
           + V   LL +Y KSGD +  +  F+ M  +D   W++MI+ + QS R   AL LF  M  
Sbjct: 177 VPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTD 236

Query: 339 ------------------------------RQSSVVPNNFTFASVLQACAAQVLLILGKQ 368
                                         R SS+ P+ FT  SVL ACA    L LGKQ
Sbjct: 237 RDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQ 296

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS-------------MILFME-------- 407
           IH+ +++  +D +  V NAL+ +YAK G +E +             +I F          
Sbjct: 297 IHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKI 356

Query: 408 ---SPEQ---------NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
              +P +         + V W  MIVGY Q    + A+ LF  MI    +P   T ++VL
Sbjct: 357 GDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVL 416

Query: 456 RACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM-DKREE 514
              +  A+LD G Q+H++ I+ +  + ++V NALI MY+K G I DAR  F+++  +R+ 
Sbjct: 417 SVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDT 476

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           ++W +MI   + HGL  EA+ LF  M + N KP+ +T+VGVLSAC++ GL+++G+  F  
Sbjct: 477 LTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNL 536

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
           M   ++IEP   HY CM+ L GR G  +EA   I  +P +P  + W +LL AC V KN+D
Sbjct: 537 MKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVD 596

Query: 635 LGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
           L +  A+ +L + P++ G +  L+N ++    W+  A VRK M+ + VKKE G SWV+ Q
Sbjct: 597 LAKVAAEKLLLIDPNNSGAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQ 656

Query: 695 GVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSE 754
             VH F V D  HP    I  M+  + K+ +  G+ PD ++VL D++ + KE+ L  HSE
Sbjct: 657 NKVHIFGVEDALHPQRDAIYRMISKIWKEIKKIGFNPDTDSVLHDLDQEVKEQILSHHSE 716

Query: 755 RLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVC 814
           +LA+AF L+  P   ++RI+KNLR+C DCH+ IK IS +V REI+VRD  RFHHF+ G C
Sbjct: 717 KLAIAFALINSPGYTTLRIMKNLRVCNDCHSAIKYISMLVGREIIVRDATRFHHFKDGSC 776

Query: 815 SCGDYW 820
           SC DYW
Sbjct: 777 SCRDYW 782



 Score =  206 bits (525), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 263/583 (45%), Gaps = 99/583 (16%)

Query: 44  SHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA----- 98
           S ++  LLQ AI++R    G+ +H  I+K G  L +F  N LLNFY +    +DA     
Sbjct: 10  SDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFS 69

Query: 99  --------------------------SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHV 132
                                      +LFD++P  +++S+ T+  G ++  +F+ A+H 
Sbjct: 70  EMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHT 129

Query: 133 ILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSV 192
             ++  +G     F  T ++   V+     +   +H+ V K G      V  SL++ Y  
Sbjct: 130 FQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVK 189

Query: 193 CGN-------------------------------VDAARQVFDGIFCKDMVSWTGMVGCY 221
            G+                                D A  +FD +  +D++SW  ++  Y
Sbjct: 190 SGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGY 249

Query: 222 AENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
               +  ++L+ F  M R    +P+ +T+ + L +C  LE+  +GK +H   ++A  D  
Sbjct: 250 CHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDIS 309

Query: 281 LYVGTELLELYAKS---------------------------------GDIVDAQLFFEEM 307
             VG  L+ +YAKS                                 GD+  A+  F+ +
Sbjct: 310 GAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSL 369

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
             +DV+ W+ MI  YAQ+   K+ALELF  M      PN++T A+VL   ++   L  GK
Sbjct: 370 KCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGK 429

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQNEVTWNTMIVGYVQL 426
           Q+H+  +++   S+V V NAL+ +Y+K G I+++  +F +   E++ +TW +MI+   Q 
Sbjct: 430 QLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQH 489

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
           G G +A+ LF  M+  +++P  +T+  VL AC     ++ G +  +L     +       
Sbjct: 490 GLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSH 549

Query: 487 NA-LIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
            A +ID++ + G I +A      M  + + ++W +++    +H
Sbjct: 550 YACMIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVH 592


>Medtr2g101710.1 | PPR containing plant protein | HC |
           chr2:43758970-43756533 | 20130731
          Length = 620

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/578 (40%), Positives = 367/578 (63%), Gaps = 5/578 (0%)

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHG--CALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
            +Y  T+ L+SC+  +A   GK +H     L   Y+QDL   T+L+ LYA S  +++A+ 
Sbjct: 46  THYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDL--ATKLVHLYAVSNSLLNARN 103

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
            F+++PK+++  W+++I  YA +     A+ L+H M    + P+NFT   VL+AC+A   
Sbjct: 104 LFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSA 163

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
           +  G+ IH  V+K G + ++FV  AL+D+YAKCG + ++  +F +   ++ V WN+M+  
Sbjct: 164 IGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAA 223

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
           Y Q G  +++++L   M  N ++PTE T  +V+ + A  A L  G ++H    +  + ++
Sbjct: 224 YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSN 283

Query: 483 IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
             V  ALIDMYAKCG +  A   F+++ ++  VSWNA+I GY+MHGL+  AL+LF+KM++
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRK 343

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
            + +P+ +TFVGVL+ACS   LLD+G++L+  M +DY I P ++HYTCM+ LLG  G+ D
Sbjct: 344 ED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD 402

Query: 603 EAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYA 662
           EA  LI  +  +P   VW ALL +C +  N++L     + ++E++P D G +V+L+NMYA
Sbjct: 403 EAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYA 462

Query: 663 VAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNK 722
            + +W+ V  +R+ M  K +KK    SW+E +  V+ F  GD SH ++  I A L+ L  
Sbjct: 463 QSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEG 522

Query: 723 KTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVD 782
              +AGY PD  +V  DVE+DEK   +  HSERLA+AFGL+       + I KNLRIC D
Sbjct: 523 LMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICED 582

Query: 783 CHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           CH  IK IS++++REI VRD+NR+H F+HG+CSCGD+W
Sbjct: 583 CHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  200 bits (508), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 197/364 (54%), Gaps = 3/364 (0%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HA  Y  G   +  + T L+  Y+V  ++  AR +FD I  +++  W  ++  YA N  
Sbjct: 69  LHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGP 128

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           ++ ++ L+ +M   G RP+N+T+   LK+C  L A G G+S+H   +K+ +++DL+VG  
Sbjct: 129 HDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAA 188

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+++YAK G ++DA   F+++  +D + W+ M+A YAQ+    E++ L   M  + V P 
Sbjct: 189 LIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPT 248

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
             T  +V+ + A    L  G++IH    + G  SN  V  AL+D+YAKCG ++ ++ LF 
Sbjct: 249 EATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFE 308

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
              E+  V+WN +I GY   G    A++LF  M   D +P  +TF  VL AC+    LD 
Sbjct: 309 RLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDE 367

Query: 467 GLQVHSLTIKTR-YNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGY 524
           G  +++L ++       +     +ID+   CG++++A      M  K +   W A++   
Sbjct: 368 GRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSC 427

Query: 525 SMHG 528
            +HG
Sbjct: 428 KIHG 431



 Score =  172 bits (435), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 187/382 (48%), Gaps = 3/382 (0%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P   + Y +LLQ  I ++  N GKQLH      G   +      L++ Y   + L +A  
Sbjct: 44  PTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARN 103

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           LFD++P  N   +  L +G + +   D+A+ +  ++   G   + F    ++K   ++  
Sbjct: 104 LFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSA 163

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
                +IH  V K G + D FVG +LID Y+ CG V  A +VFD I  +D V W  M+  
Sbjct: 164 IGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAA 223

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           YA+N   +ES+ L  +M   G RP   T+   + S   +     G+ +HG   +  +  +
Sbjct: 224 YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSN 283

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
             V T L+++YAK G +  A   FE + +K V+ W+ +I  YA    +  AL+LF  MR+
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRK 343

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIE 399
               P++ TF  VL AC+   LL  G+ +++ +++  G+   V     ++D+   CG+++
Sbjct: 344 ED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD 402

Query: 400 NSMILFME-SPEQNEVTWNTMI 420
            +  L    S + +   W  ++
Sbjct: 403 EAYDLIRNMSVKPDSGVWGALL 424


>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:2848688-2851472 | 20130731
          Length = 873

 Score =  478 bits (1231), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/786 (35%), Positives = 433/786 (55%), Gaps = 19/786 (2%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRG--APLDLFAHNILLNFYVQFDCLDDAS 99
           ++  SY AL++     R    G ++   I K      L +   N+LL+ +V+F  L DA 
Sbjct: 95  VEEDSYIALVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAW 154

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
            +F  MP  N  S+  L  G ++   FD AL++  R+   G  V P V T    L     
Sbjct: 155 YVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVG--VRPDVYTFPCVLRTCGG 212

Query: 160 LPHVC--WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
           +P +     IH  V + G ++D  V  +LI  Y+ CG++D AR VFD +  KD +SW  M
Sbjct: 213 VPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAM 272

Query: 218 V-GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC 276
           + GC+ EN    E L LFC+M      P+  T+T+ + +C  +    +G+ +HG  ++  
Sbjct: 273 IAGCF-ENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTK 331

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH 336
           + +D  V   L+++Y+  G + +A+  F +   +DV+ W+ MI+ Y  +   ++ALE + 
Sbjct: 332 FSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYK 391

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
            M    ++P+  T   VL AC+    L  G  +H    K GL   V V+N L+D+YAKC 
Sbjct: 392 MMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCK 451

Query: 397 EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
            I+ ++ +F    ++N ++W ++I+G         A+  F  M+    +P  VT   VL 
Sbjct: 452 CIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMM-RRQKPNWVTLVCVLS 510

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS 516
           ACA   A   G ++H+  ++T  ++D  + NA++DMY +CGR+  A   F  +D+ +  +
Sbjct: 511 ACARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSIDQ-DVST 569

Query: 517 WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMS 576
           WN ++ GY+  G  T A  LF +M ++N  PN++TF+ +L ACS +G++ +G   + SM 
Sbjct: 570 WNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMK 629

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLG 636
             Y+I+P ++HY C+V LLGR GK ++A + I +IP +P   VW ALL AC + + ++LG
Sbjct: 630 YKYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGALLNACRIHRRVELG 689

Query: 637 RFCAQHVLEMKPHDD----GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
              A+++     HDD    G ++LLSN+YA    WD VA VRK M++ G+  +PG SWVE
Sbjct: 690 ELAAKNIF----HDDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGCSWVE 745

Query: 693 NQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVH 752
           N+G VH F  GD  HP  K I A+LE   +K ++AG +    +  +D+ +  K      H
Sbjct: 746 NKGTVHAFLSGDNFHPQIKEINALLERFYEKMKEAG-IQGPESSHMDIMEASKADIFCGH 804

Query: 753 SERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHG 812
           SER A+ FGL+       I + KNL +C  CH  +K IS+ V+REI VRD  RFHHF+ G
Sbjct: 805 SERFAIGFGLINSAPGMPIWVTKNLYMCQSCHNTVKFISKEVRREISVRDAERFHHFKGG 864

Query: 813 VCSCGD 818
           +CSC D
Sbjct: 865 ICSCMD 870


>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:31582853-31578503 | 20130731
          Length = 1126

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/782 (33%), Positives = 427/782 (54%), Gaps = 4/782 (0%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD+ ++  +L+     +    G ++H   +K G    +F  N L+  Y +   L  A  L
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205

Query: 102 FDE--MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           FD   M   + +S+ ++        +   AL +  R+ + G E N +   + ++      
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
              +   IHA + K  H  D +V  +LI  Y+ CG ++ A +VF  +  KD VSW  ++ 
Sbjct: 266 FIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
              +N  Y +++  F  M+  G +P+  ++   + +         G  VH  A+K   D 
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDS 385

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           ++++G  L+++Y K   +      FE MP+KD+I W+ +IA YAQ++   +AL L   ++
Sbjct: 386 NMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQ 445

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
              +  +     S+L AC+      L K+IH  VLK GL +++ + NA+++VY +   ++
Sbjct: 446 LEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVD 504

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
            +  +F     ++ V+W +MI   V  G   +A+ LF+S+I  +++P  +T  SVL A A
Sbjct: 505 YARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAA 564

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
             ++L  G ++H   I+  +  +  +AN+L+DMYA+CG + +AR  F+ + +R+ + W +
Sbjct: 565 ALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTS 624

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           MI    MHG   +A++LF+KM   N  P+ +TF+ +L ACS++GL+ +G+  F+ M  +Y
Sbjct: 625 MINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEY 684

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFC 639
            +EP  EHY C+V LL R    +EA   +  +P +PS  VW ALLGAC +  N DLG   
Sbjct: 685 KLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVA 744

Query: 640 AQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHY 699
           A+ +L++   + G +VL+SN +A   RW++V  VR  MK   +KK+PG SW+E +  +H 
Sbjct: 745 AKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHT 804

Query: 700 FSVGDTSHPD-NKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLAL 758
           F   D SHP  N +   + ++        GY      V  DV ++EK + L+ HSERLAL
Sbjct: 805 FMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLAL 864

Query: 759 AFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGD 818
            +GLL       +RI KNLRIC DCH   K+ SE+ QR +VVRD +RFHHF+ G+CSCGD
Sbjct: 865 GYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGD 924

Query: 819 YW 820
           +W
Sbjct: 925 FW 926



 Score =  249 bits (635), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/590 (27%), Positives = 296/590 (50%), Gaps = 9/590 (1%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLD-LFAHNILLNFYVQFDCLDDAS 99
           PL   +Y+  L+    ++    G+QLH   LK    LD +F     ++ Y +     DA 
Sbjct: 44  PL-QQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAV 102

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           K+FD+M      ++  +   C  + ++  A+ +   +   G  ++ F    ++K   +  
Sbjct: 103 KVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD-GIFCK-DMVSWTGM 217
              +   IH    K G+    FV  +LI  Y+ CG++  AR +FD G+  K D VSW  +
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           +  +       E+L LF +M+ +G   N YT  +AL++C G     +G+ +H   LK+ +
Sbjct: 223 ISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNH 282

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
             D+YV   L+ +YA  G + DA+  F+ M  KD + W+ +++   Q+D   +A+  F  
Sbjct: 283 FTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQD 342

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M+ S   P+  +  +++ A      L+ G ++H+  +K G+DSN+ + N+L+D+Y KC  
Sbjct: 343 MQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCC 402

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           ++     F   PE++ ++W T+I GY Q      A+NL   +    M    +   S+L A
Sbjct: 403 VKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLA 462

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSW 517
           C+G  +     ++H   +K     DI + NA++++Y +   ++ AR  F+ ++ ++ VSW
Sbjct: 463 CSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSW 521

Query: 518 NAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM-S 576
            +MI     +GL+ EAL LFN + +TN +P+ +T V VL A +    L KG+ +   +  
Sbjct: 522 TSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIR 581

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           + + +E  I +   +V +  R G  + A  +   +  Q  +++W +++ A
Sbjct: 582 KGFFLEGLIAN--SLVDMYARCGTMENARNIFNYVK-QRDLILWTSMINA 628



 Score =  227 bits (579), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 246/468 (52%), Gaps = 12/468 (2%)

Query: 167 IHACVYKRGHQADA-FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           +HA   K  +  D+ F+ T  +  Y  CG+   A +VFD +  + + +W  M+G      
Sbjct: 68  LHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAG 127

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
            Y E+++L+ +MRV+G   + +T    LK+C   +   +G  +HG A+K  Y   ++V  
Sbjct: 128 RYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCN 187

Query: 286 ELLELYAKSGDIVDAQLFFEE--MPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
            L+ +YAK GD+  A++ F+   M K D + W+ +I+ +     S EAL LF  M++  V
Sbjct: 188 ALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGV 247

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
             N +TF S LQAC     + +G+ IH+ +LK    ++V+VSNAL+ +YA CG++E++  
Sbjct: 248 ESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAER 307

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           +F     ++ V+WNT++ G VQ      A+N F  M  +  +P +V+  +++ A    A 
Sbjct: 308 VFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSAN 367

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L  G++VH+  IK   ++++ + N+LIDMY KC  +      F+ M +++ +SW  +I G
Sbjct: 368 LLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAG 427

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           Y+ +    +ALNL  K+Q      + +    +L ACS  GL  K + L K +   Y ++ 
Sbjct: 428 YAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS--GL--KSEKLIKEI-HGYVLKG 482

Query: 584 CIEHY---TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
            +        +V + G L   D A  +   I     ++ W +++  CV
Sbjct: 483 GLADILIQNAIVNVYGELALVDYARHVFESIN-SKDIVSWTSMITCCV 529


>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:7700828-7696262 | 20130731
          Length = 857

 Score =  474 bits (1219), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/702 (36%), Positives = 411/702 (58%), Gaps = 23/702 (3%)

Query: 136 LFKEGHEVNPFV-CTTIIKLLVSMDLPHVCWTIHACVYKRG--HQADAFVGTSLIDAYSV 192
           +  E   +NP    TT++          +  TIHA +   G  ++  +F+  SLI+ YS 
Sbjct: 31  IINEPGSLNPLTNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFL-NSLINMYSK 89

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAE---NCFYEESLQLFCQMRVMGYRPNNYTI 249
           C  +  +R +FD    KD VSW  ++  YA+      Y E  QL  +M   GY  ++YT+
Sbjct: 90  CNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTL 149

Query: 250 TAALKSCLGLEAFGV------GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           ++ L +C     F V      G+ +HG  +K   D ++ V T LL++YAKSG + DA   
Sbjct: 150 SSVLNAC----CFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRV 205

Query: 304 FE--EMPKKDVIPWSLMIARYAQS----DRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
           FE  ++  K+   ++ MIA + +     + ++EA+ +F+ MR+  V  + FTF+SV++AC
Sbjct: 206 FEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKAC 265

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWN 417
                  +G+QIH  VLK  L+ + FV+++L+D+Y+  GEI++ +  F  +P+ + V+W 
Sbjct: 266 VGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWT 325

Query: 418 TMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
           + I G V+ G  E  ++LF   + +  +  E   SSV+ ACA  AA   G Q+    +K 
Sbjct: 326 SAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKF 385

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
              +   V N  I MYAK G I+ AR TF + +K + VSW+ MIC Y+ HG + E+L LF
Sbjct: 386 GVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLF 445

Query: 538 NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGR 597
             M  +   PN++T +GVL+ACS+ GL+D+G   +++M +DY +   ++H  C+V LLGR
Sbjct: 446 ELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGR 505

Query: 598 LGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLL 657
            G+ +EA + I +  F+   ++WRALLGAC V K+ ++G+  A  V+E++PH+  ++VLL
Sbjct: 506 AGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIELEPHEAASYVLL 565

Query: 658 SNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAML 717
            N+Y    +  +   VRK M+ +GVKKEPG+SW+E    VH F V D SHP ++LI + L
Sbjct: 566 YNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRSHPISELIYSRL 625

Query: 718 EWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNL 777
             L  K ++  +  +  A  +   +      +  HSE+LA+ FG++ +P +  +R++KNL
Sbjct: 626 GELLAKIKEISFDNEKLAFYISETEQSGTVRMSHHSEKLAVTFGIISLPISAPVRVMKNL 685

Query: 778 RICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDY 819
           R+C DCHT +KLIS+V +REI++RD  RFHHF+ GVCSC DY
Sbjct: 686 RVCSDCHTTMKLISKVEKREIILRDAIRFHHFKDGVCSCKDY 727



 Score =  179 bits (454), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 241/497 (48%), Gaps = 20/497 (4%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAH-NILLNFYVQFDCLDDASKLFDEMP 106
             LL    + ++   G+ +H  IL  G      +  N L+N Y + + +  +  LFD   
Sbjct: 45  TTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSS 104

Query: 107 LTNTISFVTLAQGCSR---SHQFDHALHVILRLFKEGHEVNPFVCTTIIKL--LVSMDLP 161
           + + +S+ ++    ++      +     ++ R+ + G+  + +  ++++        D  
Sbjct: 105 IKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNC 164

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDG--IFCKDMVSWTGMV- 218
                IH    K G   +  V T+L+D Y+  G +  A +VF+G  +  K+   +  M+ 
Sbjct: 165 FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIA 224

Query: 219 -----GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
                G   EN    E++++F +MR MG + + +T ++ +K+C+G   F VG+ +HG  L
Sbjct: 225 GFLRGGLCCENA--REAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVL 282

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K   + D +V + L++LY+  G+I D    FE  PK DV+ W+  IA   ++ + +  L 
Sbjct: 283 KNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLS 342

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LF+         + F  +SV+ ACA       G+QI    LK G+     V N  + +YA
Sbjct: 343 LFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYA 402

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           K G+I+++   F E+ + + V+W+ MI  Y Q G  ++++ LF  M  + + P ++T   
Sbjct: 403 KSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLG 462

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANA--LIDMYAKCGRINDA-RLTFDKMD 510
           VL AC+    +D GL  +  T+K  Y     V ++  ++D+  + GR+ +A R  +D   
Sbjct: 463 VLTACSHGGLVDEGLGYYE-TMKKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDSGF 521

Query: 511 KREEVSWNAMICGYSMH 527
           + + V W A++    +H
Sbjct: 522 EDDPVLWRALLGACKVH 538



 Score =  107 bits (268), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 136/280 (48%), Gaps = 8/280 (2%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +++++++  + N     G+Q+H  +LK     D F  + L++ Y  F  +DD  + F+  
Sbjct: 257 TFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMT 316

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
           P  + +S+ +   GC ++ +F++ L +  R   +G +++ F+ ++++     M       
Sbjct: 317 PKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGE 376

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            I     K G      V  + I  Y+  G++D+AR  F      D+VSW+ M+  YA++ 
Sbjct: 377 QIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHG 436

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCL--GLEAFGVGKSVHGCALKACYDQDLYV 283
           F +ESL+LF  M V G  PN  T+   L +C   GL   G+G   +   +K  Y     V
Sbjct: 437 FAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLG---YYETMKKDYGMAANV 493

Query: 284 GTE--LLELYAKSGDIVDAQLF-FEEMPKKDVIPWSLMIA 320
                +++L  ++G + +AQ F ++   + D + W  ++ 
Sbjct: 494 KHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLG 533


>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:7700828-7697127 | 20130731
          Length = 774

 Score =  473 bits (1217), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/702 (36%), Positives = 411/702 (58%), Gaps = 23/702 (3%)

Query: 136 LFKEGHEVNPFV-CTTIIKLLVSMDLPHVCWTIHACVYKRG--HQADAFVGTSLIDAYSV 192
           +  E   +NP    TT++          +  TIHA +   G  ++  +F+  SLI+ YS 
Sbjct: 31  IINEPGSLNPLTNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFL-NSLINMYSK 89

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAE---NCFYEESLQLFCQMRVMGYRPNNYTI 249
           C  +  +R +FD    KD VSW  ++  YA+      Y E  QL  +M   GY  ++YT+
Sbjct: 90  CNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTL 149

Query: 250 TAALKSCLGLEAFGV------GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           ++ L +C     F V      G+ +HG  +K   D ++ V T LL++YAKSG + DA   
Sbjct: 150 SSVLNAC----CFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRV 205

Query: 304 FE--EMPKKDVIPWSLMIARYAQS----DRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
           FE  ++  K+   ++ MIA + +     + ++EA+ +F+ MR+  V  + FTF+SV++AC
Sbjct: 206 FEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKAC 265

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWN 417
                  +G+QIH  VLK  L+ + FV+++L+D+Y+  GEI++ +  F  +P+ + V+W 
Sbjct: 266 VGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWT 325

Query: 418 TMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
           + I G V+ G  E  ++LF   + +  +  E   SSV+ ACA  AA   G Q+    +K 
Sbjct: 326 SAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKF 385

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
              +   V N  I MYAK G I+ AR TF + +K + VSW+ MIC Y+ HG + E+L LF
Sbjct: 386 GVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLF 445

Query: 538 NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGR 597
             M  +   PN++T +GVL+ACS+ GL+D+G   +++M +DY +   ++H  C+V LLGR
Sbjct: 446 ELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGR 505

Query: 598 LGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLL 657
            G+ +EA + I +  F+   ++WRALLGAC V K+ ++G+  A  V+E++PH+  ++VLL
Sbjct: 506 AGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIELEPHEAASYVLL 565

Query: 658 SNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAML 717
            N+Y    +  +   VRK M+ +GVKKEPG+SW+E    VH F V D SHP ++LI + L
Sbjct: 566 YNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRSHPISELIYSRL 625

Query: 718 EWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNL 777
             L  K ++  +  +  A  +   +      +  HSE+LA+ FG++ +P +  +R++KNL
Sbjct: 626 GELLAKIKEISFDNEKLAFYISETEQSGTVRMSHHSEKLAVTFGIISLPISAPVRVMKNL 685

Query: 778 RICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDY 819
           R+C DCHT +KLIS+V +REI++RD  RFHHF+ GVCSC DY
Sbjct: 686 RVCSDCHTTMKLISKVEKREIILRDAIRFHHFKDGVCSCKDY 727



 Score =  180 bits (456), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 241/497 (48%), Gaps = 20/497 (4%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAH-NILLNFYVQFDCLDDASKLFDEMP 106
             LL    + ++   G+ +H  IL  G      +  N L+N Y + + +  +  LFD   
Sbjct: 45  TTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSS 104

Query: 107 LTNTISFVTLAQGCSR---SHQFDHALHVILRLFKEGHEVNPFVCTTIIKL--LVSMDLP 161
           + + +S+ ++    ++      +     ++ R+ + G+  + +  ++++        D  
Sbjct: 105 IKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNC 164

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDG--IFCKDMVSWTGMV- 218
                IH    K G   +  V T+L+D Y+  G +  A +VF+G  +  K+   +  M+ 
Sbjct: 165 FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIA 224

Query: 219 -----GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
                G   EN    E++++F +MR MG + + +T ++ +K+C+G   F VG+ +HG  L
Sbjct: 225 GFLRGGLCCENA--REAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVL 282

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K   + D +V + L++LY+  G+I D    FE  PK DV+ W+  IA   ++ + +  L 
Sbjct: 283 KNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLS 342

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LF+         + F  +SV+ ACA       G+QI    LK G+     V N  + +YA
Sbjct: 343 LFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYA 402

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           K G+I+++   F E+ + + V+W+ MI  Y Q G  ++++ LF  M  + + P ++T   
Sbjct: 403 KSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLG 462

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANA--LIDMYAKCGRINDA-RLTFDKMD 510
           VL AC+    +D GL  +  T+K  Y     V ++  ++D+  + GR+ +A R  +D   
Sbjct: 463 VLTACSHGGLVDEGLGYYE-TMKKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDSGF 521

Query: 511 KREEVSWNAMICGYSMH 527
           + + V W A++    +H
Sbjct: 522 EDDPVLWRALLGACKVH 538



 Score =  107 bits (268), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 136/280 (48%), Gaps = 8/280 (2%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +++++++  + N     G+Q+H  +LK     D F  + L++ Y  F  +DD  + F+  
Sbjct: 257 TFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMT 316

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
           P  + +S+ +   GC ++ +F++ L +  R   +G +++ F+ ++++     M       
Sbjct: 317 PKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGE 376

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            I     K G      V  + I  Y+  G++D+AR  F      D+VSW+ M+  YA++ 
Sbjct: 377 QIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHG 436

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCL--GLEAFGVGKSVHGCALKACYDQDLYV 283
           F +ESL+LF  M V G  PN  T+   L +C   GL   G+G   +   +K  Y     V
Sbjct: 437 FAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLG---YYETMKKDYGMAANV 493

Query: 284 GTE--LLELYAKSGDIVDAQLF-FEEMPKKDVIPWSLMIA 320
                +++L  ++G + +AQ F ++   + D + W  ++ 
Sbjct: 494 KHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLG 533


>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:2861060-2858958 | 20130731
          Length = 700

 Score =  473 bits (1216), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/641 (39%), Positives = 375/641 (58%), Gaps = 5/641 (0%)

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           SLI+ Y  C  +  AR +FD +  + +VS+  ++G Y  +  + E ++LF  M    Y+P
Sbjct: 60  SLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQP 119

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFF 304
           N Y  T  L +C        G   HG   K       +V + L+ +Y+K   +  A    
Sbjct: 120 NEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVL 179

Query: 305 EEM-----PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           E          D   ++ ++    +S R  EA+E+   M    VV ++ T+ SV+  C  
Sbjct: 180 ESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQ 239

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
              L LG Q+H+ +LK GL  +VFV + L+D++ KCG++ ++  +F     +N V W ++
Sbjct: 240 IRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSL 299

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           +  Y+Q G+ E+ +NL S M        E TF+ +L A AG AAL  G  +H+   K   
Sbjct: 300 MTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGI 359

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
            N + V NALI+MY+KCG I+ +   F  M  R+ ++WNAMICGYS HGL  +AL LF  
Sbjct: 360 KNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQD 419

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           M      PN +TFVGVLSAC++  L+++G      + + + +EP +EHYTC+V +L R G
Sbjct: 420 MLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAG 479

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN 659
             +EA   +     +  V+ WR LL AC + +N +LG   A+ +L+M P D GT+ LLSN
Sbjct: 480 MLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSN 539

Query: 660 MYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEW 719
           MYA A+ WD+V  +RK M+ + VKKEPG+SW+E +  VH FS   ++HP+   I   ++ 
Sbjct: 540 MYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQL 599

Query: 720 LNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRI 779
           L +  +  GYVP+  AVL DVED++KE +L  HSE+LA+A+GL++IPS   IR++KNLRI
Sbjct: 600 LLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRI 659

Query: 780 CVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           C DCHT +KLIS+V  R I+VRD +RFHHF+ G C+C D+W
Sbjct: 660 CEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  197 bits (501), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 210/424 (49%), Gaps = 13/424 (3%)

Query: 58  RHPNAGKQLHCDILKRGAP--------LDLFAHNILLNFYVQFDCLDDASKLFDEMPLTN 109
           ++ N GK +H  +L R            ++   N L+N YV+   L  A  LFDEM L +
Sbjct: 26  KNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRS 85

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHA 169
            +S+  L  G   S +    + +   +    ++ N +V TT++               H 
Sbjct: 86  VVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHG 145

Query: 170 CVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFC-----KDMVSWTGMVGCYAEN 224
            ++K G     FV +SL+  YS C +VD A QV +          D   +  ++    E+
Sbjct: 146 FLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVES 205

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
               E++++  +M   G   ++ T  + +  C  +   G+G  VH   LK     D++VG
Sbjct: 206 GRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG 265

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           + L++++ K GD++ A+  F+ +  ++V+ W+ ++  Y Q+   +E L L  CM +   +
Sbjct: 266 SMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTM 325

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
            N FTFA +L A A    L  G  +H+ V K+G+ + V V NAL+++Y+KCG I++S  +
Sbjct: 326 SNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDV 385

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F +   ++ +TWN MI GY Q G G++A+ LF  M+     P  VTF  VL ACA  A +
Sbjct: 386 FFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALV 445

Query: 465 DPGL 468
           + G 
Sbjct: 446 NEGF 449



 Score =  129 bits (323), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 7/330 (2%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
           QP  + + +  +L     +     G Q H  + K G     F  + L++ Y +   +D A
Sbjct: 118 QP--NEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLA 175

Query: 99  SKLFDEMPLT-----NTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK 153
            ++ +          +   + ++      S +   A+ V+ R+  EG   +     +++ 
Sbjct: 176 LQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMG 235

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS 213
           L   +    +   +HA + K G   D FVG+ L+D +  CG+V +AR+VFDG+  +++V 
Sbjct: 236 LCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVV 295

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           WT ++  Y +N  +EE+L L   M   G   N +T    L +  G+ A   G  +H    
Sbjct: 296 WTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVE 355

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K      + VG  L+ +Y+K G I  +   F +M  +D+I W+ MI  Y+Q    K+AL 
Sbjct: 356 KLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALL 415

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           LF  M  +   PN+ TF  VL ACA   L+
Sbjct: 416 LFQDMLSAGECPNHVTFVGVLSACAHLALV 445



 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 2/279 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           DS +Y +++    Q R    G Q+H  +LK G   D+F  ++L++ + +   +  A K+F
Sbjct: 226 DSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVF 285

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           D +   N + + +L     ++ +F+  L+++  + +EG   N F    ++     M    
Sbjct: 286 DGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALR 345

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
               +HA V K G +    VG +LI+ YS CG +D++  VF  +  +D+++W  M+  Y+
Sbjct: 346 HGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYS 405

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC-YDQDL 281
           ++   +++L LF  M   G  PN+ T    L +C  L     G       +K    +  L
Sbjct: 406 QHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGL 465

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKK-DVIPWSLMI 319
              T ++ +  ++G + +A+ F      K DV+ W +++
Sbjct: 466 EHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLL 504



 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 25/282 (8%)

Query: 363 LILGKQIHSNVLKVGLDS--------NVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
           L  GK IH+ +L     S        N+   N+L+++Y KC ++  +  LF E   ++ V
Sbjct: 28  LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           ++N ++ GY+  G+  + + LF +M+ +  QP E  F++VL ACA    +  G+Q H   
Sbjct: 88  SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFL 147

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM-----DKREEVSWNAMICGYSMHGL 529
            K        V ++L+ MY+KC  ++ A    +       +  +   +N+++      G 
Sbjct: 148 FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGR 207

Query: 530 STEALNLFNKMQQTNCKPNKLTFVGVLSACSNA-----GLLDKGQSLFKSMSQDYNIEPC 584
             EA+ +  +M       + +T+V V+  C        GL    Q L   ++ D  +   
Sbjct: 208 LGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG-- 265

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
               + +V + G+ G    A K+   +    +V+VW +L+ A
Sbjct: 266 ----SMLVDMFGKCGDVLSARKVFDGLQ-NRNVVVWTSLMTA 302


>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:988953-991582 | 20130731
          Length = 838

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/798 (33%), Positives = 424/798 (53%), Gaps = 49/798 (6%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQF---DCLDDASKLFDEMPLT-------NTISF 113
           KQLHC++LK+G    +F  N L+   VQ    + L+ A   F E   T       NT+  
Sbjct: 49  KQLHCNMLKKG----VFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIR 104

Query: 114 VTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYK 173
              A G  +   F +   +I+      +   PF+ +   K++   +   V    H  V K
Sbjct: 105 GYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV----HGVVVK 160

Query: 174 RGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
            G   D FV  SLI  Y+ CG VD  R+VFD +  +++VSWT ++  Y+     +E++ L
Sbjct: 161 MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCL 220

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
           F +M  +G  PN  T+  A+ +C  L+   +GK V     +     +  V   LL++Y K
Sbjct: 221 FFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMK 280

Query: 294 SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASV 353
            GD+   +  F+E   K+++ ++ +++ Y Q   + E L +   M Q    P+  T  S 
Sbjct: 281 CGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLST 340

Query: 354 LQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC------------------ 395
           + ACA    L +GK  H+ V + GL+    +SNA++D+Y KC                  
Sbjct: 341 IAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTV 400

Query: 396 -------------GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
                        GE+E ++ +F E PE N V+WNTMI   VQ    E+A++L   M   
Sbjct: 401 VTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQ 460

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
            ++   VT   +  AC    ALD    +++   K   + D+ +  AL+DM+++CG   +A
Sbjct: 461 GIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNA 520

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
              F+ M+KR+  +W A I   ++ G +  A+ LF++M + + K +   FV +L+A S+ 
Sbjct: 521 MRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHG 580

Query: 563 GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRA 622
           G +D+G+ LF +M + + + P I HY CMV LLGR G  +EA  L+  +P +P+ ++W +
Sbjct: 581 GYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGS 640

Query: 623 LLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGV 682
            L AC   KN++   +  + + ++ P   G HVLLSN+YA A +W++VA VR  MK KG 
Sbjct: 641 FLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGF 700

Query: 683 KKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVED 742
           +K  G S +E  G++  F+ GD SH +N  I  ML+ +N +    GYVPD   VL+DV++
Sbjct: 701 QKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDE 760

Query: 743 DEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRD 802
            EKE  L  HSE+LA+A+GL+       IR++KNLR+C DCH+  KL+S++  REI VRD
Sbjct: 761 QEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRD 820

Query: 803 INRFHHFQHGVCSCGDYW 820
            NR+H F+ G CSC D+W
Sbjct: 821 NNRYHFFKEGFCSCRDFW 838



 Score =  157 bits (398), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 230/521 (44%), Gaps = 39/521 (7%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+ ++  LL    +    + G Q+H  ++K G   DLF  N L++FY     +D   K+F
Sbjct: 131 DNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVF 190

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           DEM   N +S+ +L  G S  +    A+ +   + + G E NP      I     +    
Sbjct: 191 DEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLE 250

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +   + + G +++  V  +L+D Y  CG++ A R++FD    K++V +  ++  Y 
Sbjct: 251 LGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYV 310

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           ++    E L +  +M   G RP+  T+ + + +C  L    VGKS H    +   ++   
Sbjct: 311 QHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDN 370

Query: 283 VGTELLELYAKSGD--------------------------IVDAQL-----FFEEMPKKD 311
           +   ++++Y K G                           + D +L      F EMP+ +
Sbjct: 371 ISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESN 430

Query: 312 VIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHS 371
           ++ W+ MI    Q+   +EA++L   M+   +  +  T   +  AC     L L K I++
Sbjct: 431 LVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYT 490

Query: 372 NVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEK 431
            + K  +  ++ +  AL+D++++CG+  N+M +F    +++   W   I      G+ + 
Sbjct: 491 YIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKG 550

Query: 432 AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR-YNNDIAVANALI 490
           A+ LF  M+  D++  +  F ++L A +    +D G Q+     K    +  I     ++
Sbjct: 551 AIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMV 610

Query: 491 DMYAKCGRINDARLTFDKMD----KREEVSWNAMICGYSMH 527
           D+  + G + +A   FD M     K  +V W + +     H
Sbjct: 611 DLLGRAGLLEEA---FDLMKSMPIKPNDVIWGSFLAACRKH 648



 Score =  114 bits (285), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 15/233 (6%)

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
           S LQ C   + L   KQ+H N+LK G    VF  N L+    + G  E S+   + + ++
Sbjct: 37  SSLQTCKTLIEL---KQLHCNMLKKG----VFNINKLIAACVQMGTHE-SLNYALNAFKE 88

Query: 412 NE------VTWNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQPTEVTFSSVLRACAGFAAL 464
           +E       T NT+I GY   G  ++A+ ++  M I   + P   TF  +L AC+   A 
Sbjct: 89  DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAF 148

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
             G+QVH + +K     D+ VAN+LI  YA CG+++  R  FD+M +R  VSW ++I GY
Sbjct: 149 SEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY 208

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
           S+  ++ EA+ LF +M +   +PN +T V  +SAC+    L+ G+ +   M++
Sbjct: 209 SVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTE 261


>Medtr7g417770.1 | PPR containing plant-like protein | HC |
           chr7:5697167-5694522 | 20130731
          Length = 881

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/706 (33%), Positives = 402/706 (56%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  ++A +L+          G Q+HC  ++ G   D+     L++ Y     LD A  +F
Sbjct: 169 DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIF 228

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            EMP  N++ +  +  G  R+ +F   L +   +  EG  V+     +  +    +    
Sbjct: 229 CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFE 288

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +HA   K     D  VGT+ +D Y+ C  +  AR+VF+        S   ++  YA
Sbjct: 289 LGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYA 348

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
                 E+L++F  ++      +  +++ AL +C  ++ +  G  +HG A+K   D ++ 
Sbjct: 349 RQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNIC 408

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V   +L++YAK G +++A L F++M  KD + W+ +IA + Q++  +E L LF  M +S+
Sbjct: 409 VANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRST 468

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           + P+++TF SV++ACA +  L  G ++H  V+K G+  + FV +A++D+Y KCG +  + 
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE 528

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            +     E+  V+WN++I G+     GE A++ FS M+   + P   T+++VL  CA  A
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            ++ G Q+H   +K + ++D+ +A+ ++DMY+KCG + D+R+ F+K  KR+ V+W+AMIC
Sbjct: 589 TVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC 648

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
            Y+ HGL  +A+ LF +MQ  N KPN   F+ VL AC++ G +DKG   F+ M   Y ++
Sbjct: 649 AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLD 708

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH 642
           P +EHY+CMV LLGR G+ +EA++LI  +PF+   ++WR LLG C +Q N+++    A  
Sbjct: 709 PQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANS 768

Query: 643 VLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSV 702
           +L++ P D   +VLLSN+YA+A  W  VA +R  MK   +KKEPG SW++ +  VH F V
Sbjct: 769 LLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLV 828

Query: 703 GDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERH 748
           GD +HP ++ I      L  + +  GYVP+ +  LLD E DE++ +
Sbjct: 829 GDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDSY 874



 Score =  277 bits (708), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 186/675 (27%), Positives = 320/675 (47%), Gaps = 71/675 (10%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQ-------FD 93
           P    +++ + Q+    +  N GKQ H  I   G    +F  N LL FY +       F+
Sbjct: 35  PTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFN 94

Query: 94  CLDD------------------------ASKLFDEMPLTNTISFVTLAQGCSRS--HQFD 127
             D                         A  LFD MP  + +S+ ++     ++  H+  
Sbjct: 95  VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154

Query: 128 HALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLI 187
             +   +RL +  H+   F    ++K    ++   +   +H    + G  +D   GT+L+
Sbjct: 155 IEIFTKMRLLEIQHDYATF--AVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALV 212

Query: 188 DAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNY 247
           D YS C  +D A  +F  +  ++ V W+ ++  Y  N  + E L+L+  M   G   +  
Sbjct: 213 DMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQA 272

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           T  +A +SC GL AF +G  +H  ALK  +  D  VGT  L++YAK   +VDA+  F   
Sbjct: 273 TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF 332

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
           P       + +I  YA+ D+  EALE+F  +++S +  +  + +  L AC+A    + G 
Sbjct: 333 PNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGI 392

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           Q+H   +K GLD N+ V+N ++D+YAKCG +  + ++F +   ++ V+WN +I  + Q  
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452

Query: 428 DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN 487
             E+ + LF SM+ + M+P + TF SV++ACAG  AL+ G++VH   IK+    D  V +
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS 512

Query: 488 ALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           A+IDMY KCG + +A    +++++R  VSWN++I G+S       AL+ F++M Q    P
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSM------SQDYNIEPCIEHY------------- 588
           +  T+  VL  C+N   ++ G+ +   +      S  Y     ++ Y             
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMF 632

Query: 589 -----------TCMVGLLGRLGKFDEAVKLIGEIPFQ---PSVMVWRALLGACVVQKNID 634
                      + M+      G  ++A+KL  E+  Q   P+  ++ ++L AC     +D
Sbjct: 633 EKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD 692

Query: 635 LGRFCAQHVLEMKPH 649
            G     +  EM+ H
Sbjct: 693 KG---LHYFREMRSH 704



 Score =  255 bits (652), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 262/511 (51%), Gaps = 13/511 (2%)

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           ++M  T  ++F  + Q CS     +       ++   G     FV   +++         
Sbjct: 31  NQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCK----- 85

Query: 163 VCWTIHAC--VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            C  ++    V+ +  Q D     ++I  Y+  GN++ A+ +FD +  +D+VSW  M+ C
Sbjct: 86  -CLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSC 144

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y +N F+ +S+++F +MR++  + +  T    LK+C G+E +G+G  VH  A++  +D D
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD 204

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           +  GT L+++Y+    +  A   F EMP+++ + WS +IA Y ++DR  E L+L+  M  
Sbjct: 205 VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
             +  +  TFAS  ++CA      LG Q+H+  LK     +  V  A +D+YAKC  + +
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F   P     + N +IVGY +     +A+ +F S+  + +   E++ S  L AC+ 
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
                 G+Q+H L +K   + +I VAN ++DMYAKCG + +A L FD M+ ++ VSWNA+
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS-----NAGLLDKGQSLFKSM 575
           I  +  +    E L LF  M ++  +P+  TF  V+ AC+     N G+   G+ +   M
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
             D+ +   I    C  G+L    K  E ++
Sbjct: 505 GLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535


>Medtr7g017700.1 | PPR containing plant-like protein | HC |
           chr7:5672185-5669078 | 20130731
          Length = 881

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/706 (33%), Positives = 402/706 (56%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  ++A +L+          G Q+HC  ++ G   D+     L++ Y     LD A  +F
Sbjct: 169 DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIF 228

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            EMP  N++ +  +  G  R+ +F   L +   +  EG  V+     +  +    +    
Sbjct: 229 CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFE 288

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +HA   K     D  VGT+ +D Y+ C  +  AR+VF+        S   ++  YA
Sbjct: 289 LGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYA 348

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
                 E+L++F  ++      +  +++ AL +C  ++ +  G  +HG A+K   D ++ 
Sbjct: 349 RQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNIC 408

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V   +L++YAK G +++A L F++M  KD + W+ +IA + Q++  +E L LF  M +S+
Sbjct: 409 VANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRST 468

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           + P+++TF SV++ACA +  L  G ++H  V+K G+  + FV +A++D+Y KCG +  + 
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE 528

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            +     E+  V+WN++I G+     GE A++ FS M+   + P   T+++VL  CA  A
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            ++ G Q+H   +K + ++D+ +A+ ++DMY+KCG + D+R+ F+K  KR+ V+W+AMIC
Sbjct: 589 TVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC 648

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
            Y+ HGL  +A+ LF +MQ  N KPN   F+ VL AC++ G +DKG   F+ M   Y ++
Sbjct: 649 AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLD 708

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH 642
           P +EHY+CMV LLGR G+ +EA++LI  +PF+   ++WR LLG C +Q N+++    A  
Sbjct: 709 PQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANS 768

Query: 643 VLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSV 702
           +L++ P D   +VLLSN+YA+A  W  VA +R  MK   +KKEPG SW++ +  VH F V
Sbjct: 769 LLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLV 828

Query: 703 GDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERH 748
           GD +HP ++ I      L  + +  GYVP+ +  LLD E DE++ +
Sbjct: 829 GDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDSY 874



 Score =  277 bits (708), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 186/675 (27%), Positives = 320/675 (47%), Gaps = 71/675 (10%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQ-------FD 93
           P    +++ + Q+    +  N GKQ H  I   G    +F  N LL FY +       F+
Sbjct: 35  PTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFN 94

Query: 94  CLDD------------------------ASKLFDEMPLTNTISFVTLAQGCSRS--HQFD 127
             D                         A  LFD MP  + +S+ ++     ++  H+  
Sbjct: 95  VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154

Query: 128 HALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLI 187
             +   +RL +  H+   F    ++K    ++   +   +H    + G  +D   GT+L+
Sbjct: 155 IEIFTKMRLLEIQHDYATF--AVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALV 212

Query: 188 DAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNY 247
           D YS C  +D A  +F  +  ++ V W+ ++  Y  N  + E L+L+  M   G   +  
Sbjct: 213 DMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQA 272

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           T  +A +SC GL AF +G  +H  ALK  +  D  VGT  L++YAK   +VDA+  F   
Sbjct: 273 TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF 332

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
           P       + +I  YA+ D+  EALE+F  +++S +  +  + +  L AC+A    + G 
Sbjct: 333 PNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGI 392

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           Q+H   +K GLD N+ V+N ++D+YAKCG +  + ++F +   ++ V+WN +I  + Q  
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452

Query: 428 DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN 487
             E+ + LF SM+ + M+P + TF SV++ACAG  AL+ G++VH   IK+    D  V +
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS 512

Query: 488 ALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           A+IDMY KCG + +A    +++++R  VSWN++I G+S       AL+ F++M Q    P
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSM------SQDYNIEPCIEHY------------- 588
           +  T+  VL  C+N   ++ G+ +   +      S  Y     ++ Y             
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMF 632

Query: 589 -----------TCMVGLLGRLGKFDEAVKLIGEIPFQ---PSVMVWRALLGACVVQKNID 634
                      + M+      G  ++A+KL  E+  Q   P+  ++ ++L AC     +D
Sbjct: 633 EKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD 692

Query: 635 LGRFCAQHVLEMKPH 649
            G     +  EM+ H
Sbjct: 693 KG---LHYFREMRSH 704



 Score =  255 bits (652), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 262/511 (51%), Gaps = 13/511 (2%)

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           ++M  T  ++F  + Q CS     +       ++   G     FV   +++         
Sbjct: 31  NQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCK----- 85

Query: 163 VCWTIHAC--VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            C  ++    V+ +  Q D     ++I  Y+  GN++ A+ +FD +  +D+VSW  M+ C
Sbjct: 86  -CLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSC 144

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y +N F+ +S+++F +MR++  + +  T    LK+C G+E +G+G  VH  A++  +D D
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD 204

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           +  GT L+++Y+    +  A   F EMP+++ + WS +IA Y ++DR  E L+L+  M  
Sbjct: 205 VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
             +  +  TFAS  ++CA      LG Q+H+  LK     +  V  A +D+YAKC  + +
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F   P     + N +IVGY +     +A+ +F S+  + +   E++ S  L AC+ 
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
                 G+Q+H L +K   + +I VAN ++DMYAKCG + +A L FD M+ ++ VSWNA+
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS-----NAGLLDKGQSLFKSM 575
           I  +  +    E L LF  M ++  +P+  TF  V+ AC+     N G+   G+ +   M
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
             D+ +   I    C  G+L    K  E ++
Sbjct: 505 GLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535


>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50487581-50485585 | 20130731
          Length = 630

 Score =  464 bits (1194), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/564 (41%), Positives = 345/564 (61%), Gaps = 8/564 (1%)

Query: 265 GKSVHGCALKACYDQDLYVGTE--------LLELYAKSGDIVDAQLFFEEMPKKDVIPWS 316
            KS    A +AC+ Q + VG E        L+ +Y+K   + DA++ F+EMP K V+ W+
Sbjct: 67  AKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWN 126

Query: 317 LMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV 376
            MI    +  + +EAL LF  M +   + N FT +SVL  CA +  ++   Q+H+  +KV
Sbjct: 127 TMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKV 186

Query: 377 GLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLF 436
            +DSN FV  AL+ VYAKC  I+++  +F   PE N VTW++++ GYVQ G  E A+ LF
Sbjct: 187 SVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLF 246

Query: 437 SSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
                   +      SS + ACAG A L  G QVH+++ K+ + ++I V ++LIDMYAKC
Sbjct: 247 RDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKC 306

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
           G I +A + F   + R  V WNAMI G+  H  + EA+ LF KMQQ    P+ +T+V VL
Sbjct: 307 GCIREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVL 366

Query: 557 SACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPS 616
           +ACS+ GL ++G   F  M +++N+ P + HY+CMV +LGR G   +A  LI  +PF  +
Sbjct: 367 NACSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSAT 426

Query: 617 VMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKN 676
             +W +LL +C +  NI+     A+H+ EM+P + G HVLL+N+YA  K+W+ VA  RK 
Sbjct: 427 SSIWGSLLASCRIHGNIEFAEIAAKHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKL 486

Query: 677 MKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAV 736
           ++   +KK+ G SW+E +  +H F+VG+ +HP    I A L+ L ++     Y  D N  
Sbjct: 487 LRDSELKKDRGTSWIEIKNKIHSFTVGERNHPLINEIYAKLDSLVEELEKLNYKVDTNND 546

Query: 737 LLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQR 796
           L DVE+ +K+  L  HSE+LA+ FGL+ +PS   IRI+KNLRIC DCH  +K + +   R
Sbjct: 547 LHDVEESKKQMLLRHHSEKLAITFGLMCLPSNIPIRIMKNLRICGDCHNFMKFVCKSTSR 606

Query: 797 EIVVRDINRFHHFQHGVCSCGDYW 820
           EI++RD NRFHHF+ G+CSCGD+W
Sbjct: 607 EIIIRDTNRFHHFKDGLCSCGDFW 630



 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 193/375 (51%), Gaps = 2/375 (0%)

Query: 50  LLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTN 109
           +LQ   ++R   AG+  H   +  G   D+   N+L+N Y +   + DA  +FDEMP+ +
Sbjct: 62  ILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKS 121

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHA 169
            +S+ T+    +R  +   AL + +++ +EG   N F  ++++           C  +HA
Sbjct: 122 VVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHA 181

Query: 170 CVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEE 229
              K    ++ FVGT+L+  Y+ C ++  A ++F+ +   + V+W+ ++  Y +N  +E 
Sbjct: 182 FSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEA 241

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
           +L LF   ++MG+  + + I++A+ +C GL     GK VH  + K+ +  ++YV + L++
Sbjct: 242 ALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLID 301

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
           +YAK G I +A + F+    + ++ W+ MI+ + +   + EA+ LF  M+Q  + P++ T
Sbjct: 302 MYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVT 361

Query: 350 FASVLQACAAQVLLILG-KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           + SVL AC+   L   G K     V +  L  +V   + ++D+  + G +  +  L    
Sbjct: 362 YVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERM 421

Query: 409 P-EQNEVTWNTMIVG 422
           P       W +++  
Sbjct: 422 PFSATSSIWGSLLAS 436



 Score =  133 bits (335), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 18/303 (5%)

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
           +S+ V N     ++LQ CA     I G+  H+  + VG ++++  SN L+++Y+KC  + 
Sbjct: 52  ESTRVSN---LQNILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVH 108

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           ++ I+F E P ++ V+WNTMI    ++   ++A+ LF  M+       E T SSVL  CA
Sbjct: 109 DARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECA 168

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
              A+   +Q+H+ +IK   +++  V  AL+ +YAKC  I DA   F+ M +   V+W++
Sbjct: 169 FKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSS 228

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           ++ GY  +GL   AL LF   Q    + +       + AC+    L +G+ +  ++S   
Sbjct: 229 ILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQV-HAISCKS 287

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ----PSVMVWRALLG-----ACVVQ 630
                I   + ++ +  + G   EA      I FQ     S+++W A++      AC ++
Sbjct: 288 GFGSNIYVTSSLIDMYAKCGCIREAY-----IVFQGEELRSIVLWNAMISGFGRHACALE 342

Query: 631 KNI 633
             I
Sbjct: 343 AMI 345


>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:21773208-21775311 | 20130731
          Length = 662

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/657 (37%), Positives = 375/657 (57%), Gaps = 18/657 (2%)

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           ++H  + K G    +F G  LID Y  C  +  AR++FD +  + +V+W  M+  +    
Sbjct: 22  SLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRG 80

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD-QDLYVG 284
             +E+++L+  M   G  P+ YT +A  K+   +     G+  HG A+   ++  D +V 
Sbjct: 81  KTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVA 140

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           T ++++YAK G + DA+  F+ +  KDV+ ++ +I  Y Q     EALE+F  M  S + 
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIK 200

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           PN +T ASVL +C     L+ GK IH  V+K GL+S V    +L+ +Y+KC  +E+S+ +
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F      + VTW + IVG VQ G  E A+++F  M+   + P   T SS+L AC+  A L
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAML 320

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
           + G Q+H++T+K   + +  V  ALI +Y KCG +  AR  FD + + + VS N MI  Y
Sbjct: 321 EAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAY 380

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC 584
           + +G   EAL LF ++++   +PN +TF+ +L AC+NAGL+++G  +F  +  +++IE  
Sbjct: 381 AQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
            +HYTCM+ LLGR  +F+EA  LI E    P V+ WR LL AC +   +++     + +L
Sbjct: 441 RDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKML 499

Query: 645 EMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGD 704
           +  P D GTH+LL+N+YA A +WDNV  ++   +   +KK P +SWV+    VH F  GD
Sbjct: 500 DQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGD 559

Query: 705 TSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLR 764
            SHP    I  ML  L +K    GY PD   VL D+E+++K   L+ HSE+LA+AF L +
Sbjct: 560 LSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWK 619

Query: 765 I-PSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
                 +IRI KNLR+C D               I+ RD  RFHHF+ G+CSC DYW
Sbjct: 620 TCGKNTAIRIFKNLRVCGDY--------------IIARDAKRFHHFKGGICSCKDYW 662



 Score =  238 bits (606), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 245/499 (49%), Gaps = 9/499 (1%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           Y +L+ Q    +     K LH  ILK G+    F H  L++ Y++   + +A KLFDEMP
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHK-LIDGYIKCSVITEARKLFDEMP 62

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWT 166
             + +++ ++        +   A+ +   +  EG   + +  + I K    M +      
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 167 IHACVYKRGHQ-ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            H      G + +D FV T ++D Y+  G +  AR VFD +  KD+V +T ++  Y ++ 
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
              E+L++F  M     +PN YT+ + L SC  L     GK +HG  +K   +  +   T
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            LL +Y+K   + D+   F  +     + W+  I    Q+ R + AL +F  M + S+ P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISP 302

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N+FT +S+L AC++  +L  G+QIH+  +K+G+D N FV  AL+ +Y KCG +E +  +F
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
               E + V+ NTMI  Y Q G G +A+ LF  +    ++P  VTF S+L AC     ++
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422

Query: 466 PGLQVHSLTIKTRYNNDIAVA----NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            G Q+ SL    R N+ I +       +ID+  +  R  +A +  ++    + + W  ++
Sbjct: 423 EGCQIFSL---IRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLL 479

Query: 522 CGYSMHGLSTEALNLFNKM 540
               +HG    A     KM
Sbjct: 480 NACKIHGEVEMAEKFMKKM 498


>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:40268645-40272453 | 20130731
          Length = 678

 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 351/594 (59%)

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           +  ++ L+  M      P+++T +  LK+C  L  F +G  +H    K  +D D++V T 
Sbjct: 85  FNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTN 144

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           ++  Y+K G + DA   F++M  K+V+ W+ MI    +  + +EA++LF  + +S + P+
Sbjct: 145 VVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPD 204

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
            F    VL+ACA    L  G+ I   + + GL  NVFV+ +L+D+Y KCG +E +  +F 
Sbjct: 205 GFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFD 264

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
              E++ V W+ MI GY   G   +A+ LF  M   +++P        L +CA   AL+ 
Sbjct: 265 GMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALEL 324

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G     L     + ++  +  +LID YAKCG + +A   +  M +++ V +NA+I G +M
Sbjct: 325 GNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAM 384

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           +G    A  +F +M +    PN+ TFVG+L  C++AGL+D G+  F SMS D+++ P IE
Sbjct: 385 YGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIE 444

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY CMV LL R G  DEA  LI  +P + +V+VW +LLG C + +   L     + ++E+
Sbjct: 445 HYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIEL 504

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
           +P + G +VLLSN+Y+ ++RWD    +R  +  KG++K PG SWVE  GVVH F VGDTS
Sbjct: 505 EPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTS 564

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIP 766
           HP ++ I   LE L K  ++AGY P    VL DVE++EKE  L  HSE+LA+AF L+   
Sbjct: 565 HPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTG 624

Query: 767 STCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           +   IR++KNLR+C DCH  IK IS+V  REIV+RD NRFH F  G CSC DYW
Sbjct: 625 AKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678



 Score =  200 bits (508), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 233/470 (49%), Gaps = 8/470 (1%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK---LFDEMPL-TNTISFVTLAQG 119
           K  HC +L+     D    +I+L   + F   ++A     +F + P  +NT  + T+ +G
Sbjct: 21  KLAHCRLLRLNLHHDNDLLSIILRSTINFS--NNAQYPILVFHKTPTNSNTFLYNTMIRG 78

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
                +F++A+H+   + K     + F  + ++K    ++L H+   IH+ V+K G   D
Sbjct: 79  MVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCD 138

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
            FV T+++  YS CG +  A +VFD +  K++VSWTGM+    E   + E++ LF  +  
Sbjct: 139 VFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLE 198

Query: 240 MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
            G RP+ + I   L++C  L     G+ +  C  +    ++++V T L+++Y K G + +
Sbjct: 199 SGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEE 258

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A+  F+ M +KD++ WS MI  YA +   +EA+ELF  MR+ +V P+ +     L +CA+
Sbjct: 259 ARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCAS 318

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
              L LG      +      SN  +  +L+D YAKCG +E ++ ++    E++ V +N +
Sbjct: 319 LGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAV 378

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTR 478
           I G    G    A  +F  M    + P E TF  +L  C     +D G    +S++    
Sbjct: 379 ISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFS 438

Query: 479 YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEV-SWNAMICGYSMH 527
               I     ++D+ A+ G +++A      M  +  V  W +++ G  +H
Sbjct: 439 VTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLH 488



 Score =  186 bits (472), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 172/306 (56%), Gaps = 4/306 (1%)

Query: 302 LFFEEMP-KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           L F + P   +   ++ MI      DR   A+ L+  M ++++VP++FTF+ VL+ACA  
Sbjct: 58  LVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARL 117

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
            L  LG  IHS V K G D +VFV   ++  Y+KCG + ++  +F +   +N V+W  MI
Sbjct: 118 NLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMI 177

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
            G ++ G   +A++LF  ++ + ++P       VLRACA    L+ G  +     +   +
Sbjct: 178 CGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS 237

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
            ++ VA +L+DMY KCG + +AR  FD M +++ V W+AMI GY+ +GL  EA+ LF +M
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMS-QDYNIEPCIEHYTCMVGLLGRLG 599
           ++ N +P+    VG LS+C++ G L+ G      M+ +++   P +   T ++    + G
Sbjct: 298 RKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCG 355

Query: 600 KFDEAV 605
             +EA+
Sbjct: 356 SMEEAL 361



 Score =  164 bits (414), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 191/383 (49%), Gaps = 4/383 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           DS +++ +L+   +    + G  +H  + K G   D+F    ++ FY +   L DA K+F
Sbjct: 103 DSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVF 162

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLP 161
           D+M + N +S+  +  GC    +F  A+ +   L + G   + FV   +++    + DL 
Sbjct: 163 DDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLE 222

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
              W I  C+ + G   + FV TSL+D Y+ CG+++ AR VFDG+  KD+V W+ M+  Y
Sbjct: 223 SGRW-IDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGY 281

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A N    E+++LF +MR +  RP+ Y +  AL SC  L A  +G    G      +  + 
Sbjct: 282 ASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNP 341

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            +GT L++ YAK G + +A   ++ M +KD + ++ +I+  A   +   A  +F  M + 
Sbjct: 342 VLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKF 401

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQ-IHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
            + PN  TF  +L  C    L+  G+   +S      +   +     ++D+ A+ G ++ 
Sbjct: 402 GIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDE 461

Query: 401 SMILFMESP-EQNEVTWNTMIVG 422
           +  L    P + N + W +++ G
Sbjct: 462 AHNLIKGMPMKANVIVWGSLLGG 484


>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:45147837-45154874 | 20130731
          Length = 787

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/648 (38%), Positives = 362/648 (55%), Gaps = 24/648 (3%)

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           Q DA     ++  Y   G VD A+ VFD +  KD +SW G++  Y +N   EE+ +LF  
Sbjct: 107 QKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLF-- 164

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYA 292
                       +   L S   L    V + + G A +  +D    ++      ++  YA
Sbjct: 165 ---------ESKVDWELISWNCLMGGYVKRKMLGDA-RRLFDHMPVRNAISWNTMISGYA 214

Query: 293 KSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFAS 352
           + GD++ A+  FEE P +DV  W+ M+  Y QS    EA  +F  M     +  N   A 
Sbjct: 215 RDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAG 274

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN 412
            +Q     +   L + +           NV   N ++  Y + G+I  +  LF    +++
Sbjct: 275 YVQYKKMDMARELFEAMPCR--------NVGSWNTIISGYGQNGDIAQARELFDMMTQRD 326

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
            V+W  +I GY Q G  EK M++   M  +       TF   L  CAG AAL  G QVH 
Sbjct: 327 CVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHG 386

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
             +KT Y+N   V NAL++MY KCG I +A   F++M  ++ +SWN M+ GY+ HG   +
Sbjct: 387 QAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQ 446

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           AL +F+ M+    KP+++T VGVL ACS+ GL D+G   F SMS+DY I P  +HY CM+
Sbjct: 447 ALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMI 506

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            LLGR G  +EA  L+  +PF+P    W ALLGA  +  N +LG   A+ V  M+P++ G
Sbjct: 507 DLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAG 566

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
            +VLLSN+YA   +W +V  +R  M++ G++K PG SWVE Q  +H F+VGD  HP+   
Sbjct: 567 MYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDR 626

Query: 713 ICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIR 772
           I A LE ++ K +  G+V     VL DVE++EK+R L  HSE+LA+AFG+L IP+   IR
Sbjct: 627 IYAYLEEIDLKMKHEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAGRPIR 686

Query: 773 ILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           ++KNLR+C DCH VIK IS++V R I++RD +RFH+   G+CSCGDYW
Sbjct: 687 VMKNLRVCEDCHNVIKYISKIVGRLIILRDSHRFHYVSEGICSCGDYW 734



 Score =  172 bits (436), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 216/471 (45%), Gaps = 47/471 (9%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P  DS S+  LL   +QN      ++L     +     +L + N L+  YV+   L DA 
Sbjct: 137 PYKDSISWNGLLAVYVQNGRLEEARRL----FESKVDWELISWNCLMGGYVKRKMLGDAR 192

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM- 158
           +LFD MP+ N IS+ T+  G +R    D  L    RLF+E    + F  T ++   V   
Sbjct: 193 RLFDHMPVRNAISWNTMISGYAR----DGDLLQARRLFEESPVRDVFTWTAMVFAYVQSG 248

Query: 159 ----------DLP---HVCWTIHACVYKRGHQADAF-----------VGT--SLIDAYSV 192
                     ++P    + + +    Y +  + D             VG+  ++I  Y  
Sbjct: 249 MLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQ 308

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G++  AR++FD +  +D VSW  ++  YA+   YE+ + +  +M+  G   N  T   A
Sbjct: 309 NGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCA 368

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           L +C G+ A  +GK VHG A+K  YD    VG  LLE+Y K G I +A   FE M  KD+
Sbjct: 369 LSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDI 428

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
           I W+ M+A YA+    ++AL +F  M+ +   P+  T   VL AC+   L   G +   +
Sbjct: 429 ISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYS 488

Query: 373 VLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVGYVQLGD-- 428
           + K  G+  N    N ++D+  + G +E +  L    P E +  TW  ++      G+  
Sbjct: 489 MSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAE 548

Query: 429 -GEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
            GEKA    + M+ N M+P       +L     +A L   + V  L +K R
Sbjct: 549 LGEKA----AEMVFN-MEPNNAGMYVLLSNL--YATLGKWVDVGKLRLKMR 592



 Score =  103 bits (257), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 31/316 (9%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           ++L+    +L  Y K+  +VDA+  F+ MP+KD + W++M++ Y +S    EA  +F  M
Sbjct: 77  KNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNM 136

Query: 339 RQSSVVPNNFTFASVLQAC---AAQVLL-------------ILGKQIHSNVLKVGLD--- 379
                +  N   A  +Q      A+ L              ++G  +   +L        
Sbjct: 137 PYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFD 196

Query: 380 ----SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNL 435
                N    N ++  YA+ G++  +  LF ESP ++  TW  M+  YVQ G  ++A  +
Sbjct: 197 HMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRV 256

Query: 436 FSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
           F  M G      E+ ++ ++     +  +D   ++     +     ++   N +I  Y +
Sbjct: 257 FDEMPGK----REMAYNVMIAGYVQYKKMDMAREL----FEAMPCRNVGSWNTIISGYGQ 308

Query: 496 CGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGV 555
            G I  AR  FD M +R+ VSW A+I GY+  G   + +++  KM++     N+ TF   
Sbjct: 309 NGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCA 368

Query: 556 LSACSNAGLLDKGQSL 571
           LS C+    L  G+ +
Sbjct: 369 LSTCAGMAALVLGKQV 384



 Score = 73.6 bits (179), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 34/298 (11%)

Query: 354 LQACAAQVLLIL----------GKQIHSNVLKV--GLDSNVFVSNALMDVYAKCGEIENS 401
            Q+C+AQ   +L          GK +H+    V    D+ +      +  + + G    +
Sbjct: 8   FQSCSAQSSRLLQTMRANYNLRGKHLHNFCFPVQKARDTYIVKCTNSISTHMRNGHCHLA 67

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA-CAG 460
           + +F   P +N  +WN M+ GYV+      A NLF  M   D     V  S  +R+ C  
Sbjct: 68  LRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVD 127

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
            A L        +     Y + I+  N L+ +Y + GR+ +AR  F+     E +SWN +
Sbjct: 128 EAKL--------VFDNMPYKDSIS-WNGLLAVYVQNGRLEEARRLFESKVDWELISWNCL 178

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF-KSMSQDY 579
           + GY    +  +A  LF+ M   N     +++  ++S  +  G L + + LF +S  +D 
Sbjct: 179 MGGYVKRKMLGDARRLFDHMPVRNA----ISWNTMISGYARDGDLLQARRLFEESPVRD- 233

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGR 637
                +  +T MV    + G  DEA ++  E+P +   M +  ++   V  K +D+ R
Sbjct: 234 -----VFTWTAMVFAYVQSGMLDEARRVFDEMPGKRE-MAYNVMIAGYVQYKKMDMAR 285


>Medtr3g052720.1 | organelle transcript processing protein, putative
           | HC | chr3:20868148-20864227 | 20130731
          Length = 1150

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/793 (34%), Positives = 409/793 (51%), Gaps = 81/793 (10%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNF--YVQFDCLDDASKLFDEMPLTNTISFVTLAQ 118
           N  KQ+   ++  G   D +A + L+NF  +  F     + K+F+ +   NT  + T+ +
Sbjct: 58  NQFKQILSQMILTGYITDTYAASRLVNFSTHSNFIPFQYSLKIFNHLHNPNTFIWNTIMR 117

Query: 119 GCSRSHQFDHALHVILRLF-----KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYK 173
                H          +LF        H   P +  +    +   +       IH  V K
Sbjct: 118 SHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARVSEPEGKQ----IHDHVVK 173

Query: 174 RGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
            G  +D +V  +LI+ Y+VCGN+ +A +VF      D+VSW  ++  Y       E+  +
Sbjct: 174 FGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEAECV 233

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
           + +M V     +N  I                                        L+ K
Sbjct: 234 YDKMPVRNTIASNSMIV---------------------------------------LFGK 254

Query: 294 SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASV 353
            G I  A+  F+ +  KD++ WS MI+ Y Q+   +EAL LF  M  + V+ +     S 
Sbjct: 255 EGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSA 314

Query: 354 LQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNE 413
           + AC +   + +G+ +H    K+G+   V + NAL+ +Y+ CGEI ++  +F      + 
Sbjct: 315 ISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDL 374

Query: 414 VTWNTMIVGYVQLGDGEKAMNLFSSMIGND------------------------------ 443
           V+WN+MI GY+  G  E A  LF SM+  D                              
Sbjct: 375 VSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLL 434

Query: 444 -MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
            ++P E    SV+ AC   AALD G  +H+   K  +N ++ +   L+DMY KCG + +A
Sbjct: 435 GIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENA 494

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
              F  M+++   +WNA+I G +M+GL  ++LN+F  M++T   PN++TF+GVL AC + 
Sbjct: 495 LEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHM 554

Query: 563 GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRA 622
           GL+D+G+  F SM+Q++ IEP ++HY CMV LLGR G   EA +LI  +P  P V  W A
Sbjct: 555 GLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGA 614

Query: 623 LLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGV 682
           LLGAC    N ++G    + +++++P  DG HVLLSN+YA    W +V  +R  M + GV
Sbjct: 615 LLGACRKHHNNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHGV 674

Query: 683 KKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVED 742
            K PG S +E  G+VH F  GD +HP  K I  ML  +  K +  GY P  + V LD+++
Sbjct: 675 VKMPGCSMIEANGIVHEFLAGDKTHPQIKDIEHMLNEVAAKLKIEGYAPITSEVSLDIDE 734

Query: 743 DEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRD 802
           +EKE  L+ HSE+LA+AFGL+ IP    IRI+KNLRIC DCHTV+KLIS+   REIVVRD
Sbjct: 735 EEKETALFSHSEKLAVAFGLITIPLPAPIRIIKNLRICNDCHTVVKLISKAFDREIVVRD 794

Query: 803 INRFHHFQHGVCS 815
            +RFHHF+HG CS
Sbjct: 795 RHRFHHFKHGSCS 807



 Score = 87.0 bits (214), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 3/273 (1%)

Query: 51  LQQAIQNRHPNAGKQLHCD-ILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTN 109
           LQ A+ + + N G+ L    I   G  LDL + N +++ Y+    ++DA KLFD M   +
Sbjct: 345 LQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKD 404

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHA 169
            +S+  +  G ++   F  A+ +   +   G   +     ++I     M    +   IHA
Sbjct: 405 VVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHA 464

Query: 170 CVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEE 229
            + K     +  +GT+L+D Y  CG V+ A +VF  +  K + +W  ++   A N   E+
Sbjct: 465 YISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEK 524

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA-CYDQDLYVGTELL 288
           SL +F  M+     PN  T    L +C  +     G+       +    + ++     ++
Sbjct: 525 SLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMV 584

Query: 289 ELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
           +L  ++G + +A+   E MP   DV  W  ++ 
Sbjct: 585 DLLGRAGLLKEAEELIESMPMAPDVATWGALLG 617


>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:37579244-37581349 | 20130731
          Length = 701

 Score =  454 bits (1167), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/726 (34%), Positives = 405/726 (55%), Gaps = 54/726 (7%)

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHAL----HVILRLFKEGHEVNPFVCTTIIKLLV 156
           LF   P +++  +  L   C++S+ F+ A     H+ L+LF+     + F+   ++ L  
Sbjct: 22  LFTRGPASSS-DYTRLVLHCAQSNDFNQAKRLQSHMELQLFQP---TDSFIHNQLLHLYA 77

Query: 157 SMDLPHVCWTIHAC--VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
                  C  I     ++ +  + D +   +L+ AY+  G V+    VFD + C+D VS+
Sbjct: 78  K------CGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSY 131

Query: 215 TGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
             M+ C+A N    ++L+ F +M+  G+RP  Y+   AL++C  L  F +GK +HG  + 
Sbjct: 132 NTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRVVV 191

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
             ++++++V   + +LYAK GDI  A+  F+ M  K+++ W+LMI+ Y +  +  E +  
Sbjct: 192 GEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISF 251

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAK 394
           F+ M+ S + P+  T +SVL A                                   Y +
Sbjct: 252 FNKMQLSGLKPDQVTVSSVLNA-----------------------------------YFQ 276

Query: 395 CGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSV 454
            G ++++  +F +  +++E+ W TMIVGY Q G  E A+ LFS M+  +++P   T S+V
Sbjct: 277 SGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTV 336

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           + +CA  A+L  G  VH   I    ++++ V++AL+DMY KCG   DAR+ F+ M  +  
Sbjct: 337 VSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMPIKNV 396

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           + WN+MI GY+ +G + EAL L+ +M Q N KP+ ++FVGVLSAC N  ++ +G+  F S
Sbjct: 397 IIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEGRKHFDS 456

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
           +S+   + P ++HY CM+ LLGR G  D+A+ LI  +P +P   +W ALL  C  + +I 
Sbjct: 457 ISEQ-GMTPTLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSALLSVC-SKGDIK 514

Query: 635 LGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
                A H+ ++ PH+ G++++LSN+YA   RW +VA VR  MK K  KK    SWVE  
Sbjct: 515 TAEVAANHIFQLDPHNAGSYIMLSNLYAACGRWKDVAVVRSLMKSKNAKKFSAYSWVEIG 574

Query: 695 GVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSE 754
             VH F   D +HP+ + I + L  L    +  GY PD   VL +V ++EK R +  HSE
Sbjct: 575 KKVHRFVSDDHNHPEMEKIYSELNRLIGILQQIGYNPDTGIVLHNVGEEEKLRSISHHSE 634

Query: 755 RLALAFGLLRIPSTCS-IRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGV 813
           +LALAF L++  +  + IRI+KN+RIC DCH  +K  S  + R I++RD +RFHHF  G 
Sbjct: 635 KLALAFSLIKKSNGAAPIRIIKNIRICDDCHEFMKFASIAITRPIIIRDSSRFHHFFGGK 694

Query: 814 CSCGDY 819
           CSC D+
Sbjct: 695 CSCKDH 700



 Score =  202 bits (513), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 216/418 (51%), Gaps = 39/418 (9%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P DS  +  LL    +    +  +QL   + KR    D+++ N LL+ Y +   ++D + 
Sbjct: 63  PTDSFIHNQLLHLYAKCGKISDAQQLFDKMSKR----DIYSWNALLSAYAKVGLVEDLNL 118

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           +FD M   +++S+ T+    + +     AL   +R+ ++G     +     ++    +  
Sbjct: 119 VFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLD 178

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
             +   IH  V     + + FV  ++ D Y+ CG++D AR +FDG+  K++VSW  M+  
Sbjct: 179 FRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISG 238

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y +    +E +  F +M++ G +P+  T+++ L +                         
Sbjct: 239 YVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNA------------------------- 273

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
                     Y +SG + DA+  F+++ KKD I W+ MI  YAQS R ++AL LF  M +
Sbjct: 274 ----------YFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLR 323

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
            +V P++ T ++V+ +CA    L  G+ +H  V+ +G+DSN+ VS+AL+D+Y KCG   +
Sbjct: 324 GNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLD 383

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC 458
           + ++F   P +N + WN+MI+GY Q G+ E+A+ L+  M+  + +P  ++F  VL AC
Sbjct: 384 ARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSAC 441



 Score = 83.2 bits (204), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           +LN Y Q   +DDA  +FD++   + I + T+  G ++S + + AL +   + +     +
Sbjct: 270 VLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPD 329

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD 204
               +T++     +   +    +H  V   G  ++  V ++L+D Y  CG    AR +F+
Sbjct: 330 SHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFE 389

Query: 205 GIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV 264
            +  K+++ W  M+  YA+N   EE+L L+ +M    ++P+N +    L +C+       
Sbjct: 390 TMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKE 449

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIARYA 323
           G+       +      L     ++ L  +SG+I  A    + MP K D   WS +++  +
Sbjct: 450 GRKHFDSISEQGMTPTLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSALLSVCS 509

Query: 324 QSD 326
           + D
Sbjct: 510 KGD 512


>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:11323375-11320804 | 20130731
          Length = 724

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/633 (39%), Positives = 366/633 (57%), Gaps = 14/633 (2%)

Query: 199 ARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLG 258
           A Q+FD I   D+VS+  ++  +A      +++ +F ++R +G   + +T++  + +   
Sbjct: 95  AHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISA--S 152

Query: 259 LEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK--KDVIPWS 316
           +E  G+ + +H  AL   YD    V   +L  Y + G + +A   F EM +  +D++ W+
Sbjct: 153 VEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWN 212

Query: 317 LMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV 376
            MI    Q     +AL LF  M +  +  + FT ASVL A      L  G Q H  ++K 
Sbjct: 213 AMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKS 272

Query: 377 GLDSNVFVSNALMDVYAKC---GEIENSMILFMESPEQNEVTWNTMIVGYVQLGD-GEKA 432
           G   N  V + L+D+Y+KC   G +E  M +F E P+ + V WNTMI G+ Q  D  E A
Sbjct: 273 GFHRNSHVGSGLIDLYSKCAPHGMLE-CMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDA 331

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN-NDIAVANALID 491
           ++ F  M      P + +F  V+ AC+  ++   G QVH+L IK+    N ++V NA + 
Sbjct: 332 LSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVA 391

Query: 492 MYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLT 551
           MY+KCG ++DAR  FD M ++  VS N+MI GY+ HG   E+L LF  M Q    PN +T
Sbjct: 392 MYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNIT 451

Query: 552 FVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEI 611
           F+ VLSAC++ G +D+G+  F  M + + IEP  EHY+CM+ LLGR GK ++A ++I  +
Sbjct: 452 FISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIETM 511

Query: 612 PFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVA 671
           PF P  + W ALLGAC    N++L    A   L+++P++   +V+LSN+YA A RW+  A
Sbjct: 512 PFDPGSIEWAALLGACKKHGNVELAVKAANKFLQLEPYNAAPYVMLSNVYASANRWEEAA 571

Query: 672 SVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
           +V++ M+ +GVKK+PG SW+E    VH F   DTSHP  K I   +  L  K + AGYV 
Sbjct: 572 TVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPRIKEIHTYMSELLMKLKQAGYVA 631

Query: 732 DCNAVLLDVED----DEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVI 787
           D    L+  ED    +EKER LW HSE+LA+AF L+       I ++KNLRIC DCH  I
Sbjct: 632 DIRLALVKDEDVIAIEEKERRLWHHSEKLAIAFALISTEEGAPILVVKNLRICGDCHNAI 691

Query: 788 KLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           KLIS +  REI VRD +RFH F+ G CSC DYW
Sbjct: 692 KLISAISGREITVRDTHRFHCFKEGQCSCRDYW 724



 Score =  199 bits (505), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 265/552 (48%), Gaps = 46/552 (8%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDD- 97
           Q  L   ++  LL+Q I  +    GK LH   +K   P   +  N     Y +F    + 
Sbjct: 5   QCTLHLQTFRTLLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNA 64

Query: 98  ------------------------------ASKLFDEMPLTNTISFVTLAQGCSRSHQFD 127
                                         A +LFDE+P  + +S+ TL    +R  +  
Sbjct: 65  LTAFHFTGYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECG 124

Query: 128 HALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLI 187
            A+ V   + + G  ++ F  + +I    S++   +   +H      G+   A V  +++
Sbjct: 125 QAVSVFKEVREVGLVLDGFTLSGVIS--ASVEDVGLVRQLHCFALLCGYDCYASVCNAVL 182

Query: 188 DAYSVCGNVDAARQVFD--GIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPN 245
             Y   G ++ A +VF   G  C+DMVSW  M+    ++    ++L+LF +M  MG   +
Sbjct: 183 ACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVD 242

Query: 246 NYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSG--DIVDAQLF 303
            +T+ + L +   L+    G   HG  +K+ + ++ +VG+ L++LY+K     +++    
Sbjct: 243 MFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKV 302

Query: 304 FEEMPKKDVIPWSLMIARYAQ-SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
           FEE+PK D++ W+ MI+ ++Q  D  ++AL  F  M++    P++ +F  V+ AC+    
Sbjct: 303 FEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSS 362

Query: 363 LILGKQIHSNVLKVGLDSN-VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
             +GKQ+H+  +K  +  N V V+NA + +Y+KCG + ++  +F   PEQN V+ N+MI 
Sbjct: 363 PSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIA 422

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
           GY Q G   +++ LF  M+   + P  +TF SVL ACA    +D G +  ++ +K ++  
Sbjct: 423 GYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNM-MKEKFGI 481

Query: 482 DIAVA--NALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHG---LSTEALN 535
           +      + +ID+  + G++N A    + M      + W A++     HG   L+ +A N
Sbjct: 482 EPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACKKHGNVELAVKAAN 541

Query: 536 LFNKMQQTNCKP 547
            F +++  N  P
Sbjct: 542 KFLQLEPYNAAP 553



 Score =  154 bits (388), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 195/416 (46%), Gaps = 42/416 (10%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD-------- 299
           T    LK C+  + F  GK++H   +K+      Y+      LY+K G   +        
Sbjct: 12  TFRTLLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFT 71

Query: 300 -----------------------AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH 336
                                  A   F+E+P+ DV+ ++ +IA +A+     +A+ +F 
Sbjct: 72  GYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFK 131

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
            +R+  +V + FT + V+ A    V L+  +Q+H   L  G D    V NA++  Y + G
Sbjct: 132 EVREVGLVLDGFTLSGVISASVEDVGLV--RQLHCFALLCGYDCYASVCNAVLACYGRLG 189

Query: 397 EIENSMILFMESPE--QNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSV 454
            +  +  +F E  E  ++ V+WN MIV   Q  +G KA+ LF  M    ++    T +SV
Sbjct: 190 RLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASV 249

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGR--INDARLTFDKMDKR 512
           L A      L  G+Q H   IK+ ++ +  V + LID+Y+KC    + +    F+++ K 
Sbjct: 250 LTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKP 309

Query: 513 EEVSWNAMICGYSMH-GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           + V WN MI G+S H  L  +AL+ F +MQ+    P+  +FV V+SACSN      G+ +
Sbjct: 310 DLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQV 369

Query: 572 FKSMSQDYNIEPC--IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLG 625
             +++   +I PC  +      V +  + G   +A ++   +P Q +V +   + G
Sbjct: 370 -HALAIKSDI-PCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAG 423


>Medtr8g098250.1 | PPR containing plant-like protein | HC |
           chr8:40970486-40967324 | 20130731
          Length = 998

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/691 (36%), Positives = 390/691 (56%), Gaps = 9/691 (1%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPL 107
           A++++   Q    N   Q+H  ++K G   D++    L++FY +  C+DDA  LFD + +
Sbjct: 145 ASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQV 204

Query: 108 TNTISFVTLAQGCSRSHQFDHALHVILRLF---KEGHEV-NPFVCTTIIKLLVSMDLPHV 163
             + ++ T+  G S+  +      V L+LF   KEGH   + +V ++++   + +     
Sbjct: 205 KTSFTWTTIIAGYSKQGRS----QVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEG 260

Query: 164 CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
              IH  V + G   D  +    ID Y  C  V   R++FD +  K++VSWT ++    +
Sbjct: 261 GKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQ 320

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           N F+ ++L LF +M  MG+ P+ +  T+ L SC  L A   G+ VH  A+K   D D +V
Sbjct: 321 NSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFV 380

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
              L+++YAK   + DA+  F  M   D++ ++ MI  Y++ D+  EAL+LF  MR S  
Sbjct: 381 KNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLS 440

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            P    F S+L   A+   L L  QIH  ++K G+  + F  +AL+DVY+KC  + ++ +
Sbjct: 441 SPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARL 500

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           +F E  +++ V W  M  GY Q  + E+++ L+  +  + ++P E TF++V+ A +  A+
Sbjct: 501 VFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIAS 560

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L  G Q H+  IK  +++D  VAN L+DMYAK G I +A   F   + ++   WN+MI  
Sbjct: 561 LRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIAT 620

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           Y+ HG + +AL +F  M     KPN +TFVGVLSACS+ GLLD G   F SMSQ + IEP
Sbjct: 621 YAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEP 679

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
            IEHY CMV LLGR GK  EA + I ++P + + +VWR+LL AC V  N++LG + A+  
Sbjct: 680 GIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMA 739

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVG 703
           +   P D G++VLLSN++A    W NV  +R+ M   GV KEPG SW+E    +H F   
Sbjct: 740 ISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAK 799

Query: 704 DTSHPDNKLICAMLEWLNKKTRDAGYVPDCN 734
           DT+H D+  I  +L+ L  + +  GY+ + +
Sbjct: 800 DTAHRDSAPISLVLDNLLLQIKGFGYMANTD 830



 Score =  271 bits (693), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 296/570 (51%), Gaps = 5/570 (0%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDA 98
           P ++       L   +Q+ H    K++H  I+  G    D+F  N LL+ Y + + ++ A
Sbjct: 34  PIIEQRKIGRELANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHA 93

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE-VNPFVCTTIIKLLVS 157
           +KLFD M   N +++ ++    +       AL + ++  +  +E  N ++  ++++    
Sbjct: 94  NKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQ 153

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
               +    IH  V K G+  D +V TSLID Y+    +D AR +FDG+  K   +WT +
Sbjct: 154 FGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTI 213

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           +  Y++    + SL+LF QM+     P+ Y +++ L +CL L+    GK +H   L++  
Sbjct: 214 IAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGI 273

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
             D+ +    ++ Y K   +   +  F+ M  K+V+ W+ +IA   Q+   ++AL+LF  
Sbjct: 274 VMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVE 333

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M +    P+ F   SVL +C + V L  G+Q+H+  +KV +D++ FV N L+D+YAKC  
Sbjct: 334 MARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDS 393

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           + ++  +F      + V++N MI GY +     +A++LF  M  +   PT + F S+L  
Sbjct: 394 LTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGV 453

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSW 517
            A    L+   Q+H L IK   + D    +ALID+Y+KC R+ DARL F+++  ++ V W
Sbjct: 454 SASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVW 513

Query: 518 NAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS-MS 576
            AM  GY+    + E+L L+  +Q +  KPN+ TF  V++A SN   L  GQ      + 
Sbjct: 514 TAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIK 573

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
             ++ +P + +   +V +  + G  +EA K
Sbjct: 574 MGFDDDPFVAN--TLVDMYAKSGSIEEAHK 601


>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:27639852-27642151 | 20130731
          Length = 707

 Score =  452 bits (1162), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 403/739 (54%), Gaps = 88/739 (11%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE 142
           N +++ Y +     DA  LFD+MP  NT+SF  +  G  ++     A  V    F    E
Sbjct: 56  NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKV----FDVMPE 111

Query: 143 VNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQV 202
            N    T++++  V   +      +   + +R    +    T +I        +D A+++
Sbjct: 112 RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRR----NVVSWTVMIGGLLKESRIDDAKKL 167

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
           FD I  KD+V  T M+G Y +    +E+ +LF +M+V                       
Sbjct: 168 FDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKV----------------------- 204

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
                           ++++  T ++  YAK+G +  A+  FE MP+++ + W+ M+  Y
Sbjct: 205 ----------------RNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGY 248

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNV 382
            QS R KEA ELF  M    +V           AC            +  +L+ GL    
Sbjct: 249 TQSGRMKEAFELFEAMPVKWIV-----------AC------------NEMILQFGL---- 281

Query: 383 FVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
                        GE+  + ++F    E++E TWN MI  + + G   +A+ LF+ M   
Sbjct: 282 ------------AGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQRE 329

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
            +     +  SVL  CA  A+LD G QVH+  +++ ++ D+ VA+ LI MY KCG +  A
Sbjct: 330 GVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRA 389

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
           +  F++   ++ V WN+MI GYS HGL  EALN+F+ M  +  +P+++TF+GVLSACS +
Sbjct: 390 KGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYS 449

Query: 563 GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRA 622
           G + +G  +F++M   Y +EP IEHY CMV LLGR G+ DEA++L+ ++P +P  +VW A
Sbjct: 450 GKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGA 509

Query: 623 LLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGV 682
           LLGAC     +DL     + + +++P + G +VLLS+MYA   RW +V  +RK + R+ V
Sbjct: 510 LLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR-V 568

Query: 683 KKEPGLSWVENQGVVHYFSVGDT-SHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVE 741
            K PG SW+E +  VH F+ GD+ SHP+  +I  MLE L+   R+AGY PD + VL DV+
Sbjct: 569 IKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVD 628

Query: 742 DDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVR 801
           ++EK   L  HSERLA+A+GLL++P    IR++KNLR+C DCH+ IKLI++V  REI++R
Sbjct: 629 EEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILR 688

Query: 802 DINRFHHFQHGVCSCGDYW 820
           D NRFHHF+ G CSC D+W
Sbjct: 689 DANRFHHFKDGSCSCKDFW 707



 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 51/248 (20%)

Query: 392 YAKCGEIENSMILFMESP--EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEV 449
           Y + G+I N+  +F  +P  ++   +WN M+  Y +      A+ LF  M     Q   V
Sbjct: 29  YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP----QRNTV 84

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           +F                                   N +I  Y K G + DAR  FD M
Sbjct: 85  SF-----------------------------------NGMISGYVKNGMVADARKVFDVM 109

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
            +R  VSW +M+ GY   G+  EA  LF +M + N     +   G+L        +D  +
Sbjct: 110 PERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESR----IDDAK 165

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
            LF     D   E  +   T M+G   ++G+ DEA +L  E+  + +V  W  ++     
Sbjct: 166 KLF-----DMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVR-NVFTWTTMVSGYAK 219

Query: 630 QKNIDLGR 637
              +D+ R
Sbjct: 220 NGRVDVAR 227



 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 13/186 (6%)

Query: 483 IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
           IA  NA++  Y +  +  DA L FD+M +R  VS+N MI GY  +G+  +A  +F+ M +
Sbjct: 52  IASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPE 111

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
            N     +++  ++      G++++ + LF  M +   +      +T M+G L +  + D
Sbjct: 112 RNV----VSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVS-----WTVMIGGLLKESRID 162

Query: 603 EAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYA 662
           +A KL   IP +  V+V   + G C V + +D  R   +   EMK  +  T   + + YA
Sbjct: 163 DAKKLFDMIPEKDVVVVTNMIGGYCQVGR-LDEAR---ELFDEMKVRNVFTWTTMVSGYA 218

Query: 663 VAKRWD 668
              R D
Sbjct: 219 KNGRVD 224



 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)

Query: 487 NALIDMYAKCGRINDARLTFDK--MDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
            + I  Y + G I++AR  FD   + +R   SWNAM+  Y       +AL LF++M Q N
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
                ++F G++S     G++   + +F  M      E  +  +T MV    + G  +EA
Sbjct: 83  T----VSFNGMISGYVKNGMVADARKVFDVMP-----ERNVVSWTSMVRGYVQEGMVEEA 133

Query: 605 VKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNM---Y 661
            KL  E+P + +V+ W  ++G  + +  ID     A+ + +M P  D   V+++NM   Y
Sbjct: 134 EKLFWEMP-RRNVVSWTVMIGGLLKESRID----DAKKLFDMIPEKD--VVVVTNMIGGY 186

Query: 662 AVAKRWDNVASVRKNMKRKGV 682
               R D    +   MK + V
Sbjct: 187 CQVGRLDEARELFDEMKVRNV 207


>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:14788174-14785760 | 20130731
          Length = 804

 Score =  452 bits (1162), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/665 (36%), Positives = 382/665 (57%), Gaps = 5/665 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D H+Y  +L+        + G+++H  + K G   D+F  N LL FY       DA  +F
Sbjct: 133 DDHTYPFVLKACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVF 192

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           DEM   + +S+ T+   CS     + +L     +      V P + T +  L V  D  +
Sbjct: 193 DEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSEN 252

Query: 163 VCWT--IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
           V     +H  V+K G      VG +L+D Y  CG+ +A ++VFD +  ++ VSW  ++  
Sbjct: 253 VVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITG 312

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           ++      ++L  F  M   G RPN  TI++ L     L  F +G  VHG +L+   + D
Sbjct: 313 FSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESD 372

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           +++G  L+++YAKSG    A   F +M  ++++ W+ M+A +AQ+     A+EL   M+ 
Sbjct: 373 IFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQA 432

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
               PNN TF +VL ACA    L +GK+IH+ +++ G  +++F+SNAL D+Y+KCG +  
Sbjct: 433 HGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSL 492

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F  S  +++V++N +I+GY Q  +  +++NLFS M  + M P  V+F  ++ ACA 
Sbjct: 493 ARNVFNVSI-KDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAH 551

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
            +++  G ++H   ++  ++  +  AN+L+D+Y KCGRI+ A   FD++  ++  SWN M
Sbjct: 552 LSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTM 611

Query: 521 ICGYSMHGLSTEALNLFNKMQQ-TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           I GY M G    A+NLF  M++    + + ++++ VLSACS+ GL++KG   FK M QDY
Sbjct: 612 ILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQM-QDY 670

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFC 639
           NIEP   HY CMV LLGR G+ +EA  LI  + F+P   +W ALLGAC +  N++LG + 
Sbjct: 671 NIEPTHTHYACMVDLLGRAGQIEEAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWA 730

Query: 640 AQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHY 699
           A+H+ ++KP   G ++LLSNMYA A RWD    VR+ MK +G KK PG SWV+    VH 
Sbjct: 731 AEHLFKLKPDHCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGCSWVQIGDQVHG 790

Query: 700 FSVGD 704
           F VG+
Sbjct: 791 FLVGE 795



 Score =  229 bits (583), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 206/400 (51%), Gaps = 5/400 (1%)

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGI--FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
           +  SLI  Y+   + + +  +F     F K    W  ++  Y+   F++    ++  M  
Sbjct: 69  ISASLILKYASFRHPETSLILFQNTLPFSKTAFLWNTLIRAYSIAGFFD-GFGVYNTMVR 127

Query: 240 MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
            G +P+++T    LK+C     F  G+ VHG   K  +D+D++VG  LL  Y   G  VD
Sbjct: 128 SGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVD 187

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV--PNNFTFASVLQAC 357
           A   F+EM ++D + W+ +I   +     +E+L  F  M  ++ V  P+  T  SVL  C
Sbjct: 188 AMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVC 247

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWN 417
           A    +++ + +H  V KVGL  +V V NAL+DVY KCG  E    +F E  E+NEV+WN
Sbjct: 248 ADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWN 307

Query: 418 TMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
            +I G+   G    A++ F SMI   M+P  VT SS+L           G++VH  +++ 
Sbjct: 308 AVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRM 367

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
              +DI + N+LIDMYAK G    A   F+KM  R  VSWN+M+  ++ +     A+ L 
Sbjct: 368 GIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELL 427

Query: 538 NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
            +MQ     PN +TF  VL AC+  G L+ G+ +   + Q
Sbjct: 428 RQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQ 467


>Medtr1g059720.1 | organelle transcript processing protein, putative
           | HC | chr1:25973337-25971195 | 20130731
          Length = 574

 Score =  448 bits (1152), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/556 (41%), Positives = 333/556 (59%), Gaps = 2/556 (0%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
           + VH  AL      +L V  +LL  Y +   I DA   F+EMP +D   WS+M+  +++ 
Sbjct: 20  RQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKL 79

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
                    F  + + ++ P+N+T   V++AC  +  + +G+ IH  VLK GL  + FV 
Sbjct: 80  GDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVC 139

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
             L+D+YAKC  IE++  LF     ++ VTW  MI  Y    D  +++ LF  +      
Sbjct: 140 ATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADY-DAYESLVLFDRLREEGFV 198

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLT 505
             +V   +V+ ACA   A+     V+        + D+ +  A+IDMYAKCG ++ AR  
Sbjct: 199 SDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREV 258

Query: 506 FDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLL 565
           FD+M ++  +SW+AMI  Y  HG   EAL+LF+ M      PN++TFV +L ACS++GL 
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLT 318

Query: 566 DKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLG 625
           D+G   F SM +DY + P ++HYTC+V LLGR G+ DEA+KLI  +  +    +W ALLG
Sbjct: 319 DEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLG 378

Query: 626 ACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKE 685
           AC V  N++L    A+ +LE++P + G +VLLSN+YA A +W+ V   R  M ++ +KK 
Sbjct: 379 ACRVHGNMELAGKVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKV 438

Query: 686 PGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEK 745
           PG +W+E     + FSVGD SHP +K I  ML  + KK    GYVPD   VL DVE++ K
Sbjct: 439 PGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLTSVIKKLEMVGYVPDTEFVLQDVEEEVK 498

Query: 746 ERHLWVHSERLALAFGLLRIPSTCS-IRILKNLRICVDCHTVIKLISEVVQREIVVRDIN 804
           +  L+ HSE+LA+AFGL+ IP+    IRI KNLR+C DCHT  K++S+V++R I+VRD N
Sbjct: 499 KEMLYTHSEKLAIAFGLIAIPNKGDPIRISKNLRVCGDCHTFCKMVSDVMKRSIIVRDAN 558

Query: 805 RFHHFQHGVCSCGDYW 820
           RFHHF  G CSCGDYW
Sbjct: 559 RFHHFNEGACSCGDYW 574



 Score =  175 bits (443), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           +Q+H + L  G   +L   N LL+FYVQ   ++DA  LFDEMP  +  ++  +  G S+ 
Sbjct: 20  RQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKL 79

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
             +++       + +     + +    +I+         +   IH  V K G   D FV 
Sbjct: 80  GDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVC 139

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            +L+D Y+ C  ++ AR++FD +  KD+V+WT M+GCYA+   Y ESL LF ++R  G+ 
Sbjct: 140 ATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYDAY-ESLVLFDRLREEGFV 198

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
            +   +   + +C  L A    + V+          D+ +GT ++++YAK G +  A+  
Sbjct: 199 SDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREV 258

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F+ M +K+VI WS MIA Y    + KEAL+LFH M    + PN  TF S+L AC+   L 
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLT 318

Query: 364 ILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQNEVTWNTMIV 421
             G     ++ +  G+  +V     ++D+  + G ++ ++ L    + E++E  W+ ++ 
Sbjct: 319 DEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLG 378

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQP 446
                G+ E A  +  S++  ++QP
Sbjct: 379 ACRVHGNMELAGKVAESLL--ELQP 401



 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 186/364 (51%), Gaps = 3/364 (0%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HA     G   +  V   L+  Y     ++ A  +FD +  +D  +W+ MVG +++   
Sbjct: 22  VHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGD 81

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           Y      F ++      P+NYT+   +++C   +   +G+ +H   LK     D +V   
Sbjct: 82  YNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCAT 141

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+++YAK   I DA+  F+ M  KD++ W++MI  YA  D + E+L LF  +R+   V +
Sbjct: 142 LVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVLFDRLREEGFVSD 200

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
                +V+ ACA    +   + ++  +   GL  +V +  A++D+YAKCG ++++  +F 
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFD 260

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
              E+N ++W+ MI  Y   G G++A++LF  M+   + P  +TF S+L AC+     D 
Sbjct: 261 RMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDE 320

Query: 467 GLQVH-SLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGY 524
           GL    S+        D+     ++D+  + GR+++A    + M+ +++E  W+A++   
Sbjct: 321 GLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGAC 380

Query: 525 SMHG 528
            +HG
Sbjct: 381 RVHG 384



 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 162/362 (44%), Gaps = 45/362 (12%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+++   +++     +    G+ +H  +LK G  LD F    L++ Y +   ++DA KLF
Sbjct: 100 DNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLF 159

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           D M   + +++ T+  GC   +    +L +  RL +EG   +     T++     +   H
Sbjct: 160 DVMVSKDLVTW-TVMIGCYADYDAYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMH 218

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
               ++  +   G   D  +GT++ID Y+ CG VD+AR+VFD +  K+++SW+ M+  Y 
Sbjct: 219 RARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYG 278

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
            +   +E+L LF  M   G  PN  T  + L +C                          
Sbjct: 279 YHGKGKEALDLFHMMLSCGISPNRITFVSLLYAC-------------------------- 312

Query: 283 VGTELLELYAKSGDIVDAQLFFEEM-----PKKDVIPWSLMIARYAQSDRSKEALELFHC 337
                    + SG   +   FF+ M      + DV  ++ ++    ++ R  EAL+L   
Sbjct: 313 ---------SHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIET 363

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M   +V  +   ++++L AC     + L  ++  ++L++    N  +   L ++YAK G+
Sbjct: 364 M---NVEKDERLWSALLGACRVHGNMELAGKVAESLLELQ-PKNPGIYVLLSNIYAKAGK 419

Query: 398 IE 399
            E
Sbjct: 420 WE 421


>Medtr2g018870.1 | PPR containing plant-like protein | HC |
           chr2:6013889-6015841 | 20130731
          Length = 613

 Score =  444 bits (1143), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/534 (41%), Positives = 328/534 (61%)

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           +  + + S  +  A   F  +   +V  W+ MI  YA+SD S  AL L+  M  S V P+
Sbjct: 80  IFTIVSLSAPMSYAHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPD 139

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
             T+  +L+A +  + +  G+ IHS  ++ G +S +FV N+L+ +YA CG+ E++  +F 
Sbjct: 140 THTYPFLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFE 199

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
              E++ V WN++I G+   G   +A++LF  M    ++P   T  S+  ACA   AL+ 
Sbjct: 200 LMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALEL 259

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G +VH   +K     ++ V N+L+D YAKCG I +A+  F +M +R  VSW +++ G ++
Sbjct: 260 GRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAV 319

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           +G   EAL LF +M++    P ++TFVGVL ACS+ G+LD+G + F+ M ++Y I P IE
Sbjct: 320 NGFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIE 379

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY CMV LL R G    A + I  +P QP+ ++WR LLGAC V  ++ LG     H+L++
Sbjct: 380 HYGCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHGDLSLGEIARSHLLKL 439

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
           +P   G +VLLSN+YA  +RW +V +VR++M   GV K PG S VE    V  F++GD S
Sbjct: 440 EPKHSGDYVLLSNLYASERRWSDVQTVRRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRS 499

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIP 766
           HP ++ + A+LE + +  +  GYVP    VL D+E++EKE+ L  HSE++A+AF LL   
Sbjct: 500 HPRSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTA 559

Query: 767 STCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
               IR++KNLR+C DCH  IKLIS+V  REI++RD +RFHHF  G CSC DYW
Sbjct: 560 PGTPIRVIKNLRVCADCHMAIKLISKVYAREIIIRDRSRFHHFSGGSCSCKDYW 613



 Score =  172 bits (436), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 172/341 (50%), Gaps = 4/341 (1%)

Query: 191 SVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTIT 250
           S+   +  A  VF  ++  ++ +W  M+  YAE+     +L L+ +M      P+ +T  
Sbjct: 85  SLSAPMSYAHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYP 144

Query: 251 AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
             LK+         G+ +H   ++  ++  ++V   LL +YA  GD   A   FE M ++
Sbjct: 145 FLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGER 204

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
           D++ W+ +I  +A + +  EAL LF  M    V P+ FT  S+  ACA    L LG+++H
Sbjct: 205 DLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVH 264

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGE 430
             +LKVGL  N+ V+N+L+D YAKCG I  +  +F E  E+N V+W +++VG    G GE
Sbjct: 265 VYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGE 324

Query: 431 KAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN--NDIAVANA 488
           +A+ LF  M    + P E+TF  VL AC+    LD G   +   +K  Y     I     
Sbjct: 325 EALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFN-YFRRMKEEYGIRPRIEHYGC 383

Query: 489 LIDMYAKCGRINDARLTFDKMDKREE-VSWNAMICGYSMHG 528
           ++D+ ++ G +  A      M  +   V W  ++   ++HG
Sbjct: 384 MVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHG 424



 Score =  145 bits (366), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 182/388 (46%), Gaps = 28/388 (7%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           +A  ++  +   +P+ GK L   I+   AP+  +AHN+    Y                 
Sbjct: 60  HAFSIRHNVPLNNPDIGKYLIFTIVSLSAPMS-YAHNVFTLLYN---------------- 102

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN----PFVCTTIIKLLVSMDLPH 162
             N  ++ T+ +G + S     AL +  ++     E +    PF+   I K L   D   
Sbjct: 103 -PNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRD--- 158

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
               IH+   + G ++  FV  SL+  Y+ CG+ ++A +VF+ +  +D+V+W  ++  +A
Sbjct: 159 -GEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFA 217

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
            N    E+L LF +M + G  P+ +T+ +   +C  L A  +G+ VH   LK     +L+
Sbjct: 218 LNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLH 277

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V   LL+ YAK G I +AQ  F EM +++V+ W+ ++   A +   +EAL LF  M +  
Sbjct: 278 VNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQK 337

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENS 401
           +VP   TF  VL AC+   +L  G      +  + G+   +     ++D+ ++ G ++ +
Sbjct: 338 IVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRA 397

Query: 402 MILFMESPEQ-NEVTWNTMIVGYVQLGD 428
                  P Q N V W T++      GD
Sbjct: 398 YEYIQSMPMQPNAVIWRTLLGACTVHGD 425



 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 104/214 (48%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+H+Y  LL+   ++ +   G+ +H   ++ G    +F  N LL+ Y      + A K+F
Sbjct: 139 DTHTYPFLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVF 198

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           + M   + +++ ++  G + + + + AL +   +  +G E + F   ++      +    
Sbjct: 199 ELMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALE 258

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +H  + K G   +  V  SL+D Y+ CG++  A+QVF  +  +++VSWT +V   A
Sbjct: 259 LGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLA 318

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
            N F EE+L LF +M      P   T    L +C
Sbjct: 319 VNGFGEEALGLFKEMERQKIVPREITFVGVLYAC 352


>Medtr7g103230.1 | PPR containing plant-like protein | HC |
           chr7:41735375-41738881 | 20130731
          Length = 970

 Score =  444 bits (1143), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/814 (32%), Positives = 422/814 (51%), Gaps = 56/814 (6%)

Query: 50  LLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTN 109
            L+ +  N++PN  K +H  +LK      L     L++ Y+       A +LF      N
Sbjct: 71  FLRFSSHNKNPNLAKSIHATLLKNHEIHHL--TTALISTYINLRLFSYAHRLFLSQSPPN 128

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRL-----FKEGHEVNPFV---CTTIIKLLVSMDLP 161
            +S+  L    S+S++   +L + L +      +  H     V   CT I+ L   + L 
Sbjct: 129 IVSYSALISAFSKSNREKQSLFLFLHMITVSSLRPNHYTYVAVLTACTRILNLQFGLQL- 187

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
                 HA V K G+    FV  +L+  YS CG    A +VFD +  +D+ SW  ++ C 
Sbjct: 188 ------HAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTVMSCA 241

Query: 222 AENCFYEESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
            +   Y++  +LFC M V+ G + + +T++  L +C        GK VH  A+K   + +
Sbjct: 242 VQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVKVGLEDE 301

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ---------------- 324
           L VG  L+  Y   GDI D    FE M  +DVI W+ M+  Y +                
Sbjct: 302 LNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPE 361

Query: 325 ---------------SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
                          +    +A+ELF  M +  V   +F+ +S + AC+      + +Q+
Sbjct: 362 KNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQM 421

Query: 370 HSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDG 429
           H   +K G  SNVFV  AL+D+Y +CG + ++  ++ E  E + V W +M+ GY + G  
Sbjct: 422 HGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQP 481

Query: 430 EKAMNLFSSMIGND---MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
            +A +LF   +G+    +   EV  +S+L  C      D G Q+H   +K  +++++ V 
Sbjct: 482 REAFSLFH--LGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVG 539

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           N +++MY KCG ++DA   F  M   + VSWN +I GY  H     AL ++ KMQ+   K
Sbjct: 540 NVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEEGIK 599

Query: 547 PNKLTFVGVLSAC--SNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
           P+ +TFV ++SA   ++  L+D  + LF SM   Y+IEP  +HY+  + +LG  G  +EA
Sbjct: 600 PDDITFVLIISAYRQTSLNLVDDCRILFNSMKTVYHIEPTSQHYSSFISVLGHWGLLEEA 659

Query: 605 VKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVA 664
           ++ I ++ F+PS  VWRALL  C + KN  +G+  A+++L ++P+D  T++L+SN+++ +
Sbjct: 660 LETINKMSFKPSAFVWRALLDGCRLHKNTMIGKLAAKNILALEPNDPSTYILVSNLHSSS 719

Query: 665 KRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKT 724
            RWD     R+NM+ KG +K P  SW+  +  +H F   D SH  +K I   LE L  + 
Sbjct: 720 GRWDCSERTRENMREKGFRKHPAQSWIICRKKMHSFYARDRSHQQDKDIYRGLEILILEC 779

Query: 725 RDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCH 784
              GY P+ + VL +VE+ +K++ L+ HS +LA A+GLL       IRI+KN+ +C DCH
Sbjct: 780 LKVGYEPETSFVLHEVEEHQKKKFLFNHSSKLAAAYGLLMTKPGKPIRIVKNILLCGDCH 839

Query: 785 TVIKLISEVVQREIVVRDINRFHHFQHGVCSCGD 818
           T +K  S V +R+I +RD + FH F  G CSC D
Sbjct: 840 TFLKCASFVTKRDIFLRDSSGFHCFSDGQCSCKD 873



 Score =  191 bits (485), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 255/526 (48%), Gaps = 45/526 (8%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           + ++Y A+L    +  +   G QLH  ++K G    +F  N L+ FY +     +A K+F
Sbjct: 164 NHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVF 223

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF-----KEGHEVNPFVCTTIIKLLVS 157
           DEMP  +  S+ T+     +   +D     + RLF      +G +V+ F  +T +    +
Sbjct: 224 DEMPERDIASWNTVMSCAVQEFMYDD----VFRLFCDMLVIDGLKVDYFTLSTFLTACAA 279

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
             L      +HA   K G + +  VG +LI  Y+  G++D    +F+ +  +D+++WT M
Sbjct: 280 SGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEM 339

Query: 218 VGCYAENCFYE-------------------------------ESLQLFCQMRVMGYRPNN 246
           V  Y E  F +                               ++++LF +M   G    +
Sbjct: 340 VRVYMEFGFVDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTD 399

Query: 247 YTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEE 306
           +++++ + +C  L  + V + +HG A+K  +  +++V   LL++Y + G +VDA+  +EE
Sbjct: 400 FSLSSGINACSLLADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEE 459

Query: 307 MPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS-SVVPNNFTFASVLQACAAQVLLIL 365
           + +   + W+ M+  YA++ + +EA  LFH       ++ +     S+L  C       +
Sbjct: 460 LEEVSSVVWTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDM 519

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
           GKQIH  VLK G  SNV V N ++++Y KCG +++++ +F      + V+WNT+I GY+ 
Sbjct: 520 GKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLT 579

Query: 426 LGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA-LDPGLQVHSLTIKTRYNNDIA 484
              G++A+ ++  M    ++P ++TF  ++ A    +  L    ++   ++KT Y+ +  
Sbjct: 580 HRQGDRALEIWLKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRILFNSMKTVYHIEPT 639

Query: 485 VA--NALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
               ++ I +    G + +A  T +KM  K     W A++ G  +H
Sbjct: 640 SQHYSSFISVLGHWGLLEEALETINKMSFKPSAFVWRALLDGCRLH 685


>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:32525227-32527614 | 20130731
          Length = 795

 Score =  444 bits (1143), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/729 (33%), Positives = 385/729 (52%), Gaps = 86/729 (11%)

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDG--IFCKDMVSWTGMVGCYAENCFYEESLQLF 234
           + D    T+L+ AYS  GNV  A+Q+F+   +  +D VS+  M+  Y+       +L LF
Sbjct: 68  KPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLF 127

Query: 235 CQMRVMGYRPNNYTITAALKSC------------LGLEAFGVGK----SVHGCALKACY- 277
            QM+  G+ P+ +T ++ L +             L  E   +G     SV   AL +CY 
Sbjct: 128 VQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTN-ALLSCYV 186

Query: 278 -------------------------DQDLY--VGTELLELYAKSGDIVDAQLFFEEMPKK 310
                                       +Y    T ++  Y ++ D+V A+   + +   
Sbjct: 187 CCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYP 246

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA----QVLLILG 366
             + W+ MI+ Y +    +EA + F  M    +  + +T+ S++ AC +      +   G
Sbjct: 247 IDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCG 306

Query: 367 KQIHSNVLKVGLDSN----VFVSNALMDVYAK---------------------------- 394
           +Q+H  +L+  ++ +    + V+NAL+  Y K                            
Sbjct: 307 RQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSG 366

Query: 395 ---CGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTF 451
                 IE +  +F E PE+N +TW  MI G  Q G GE+ + LF+ M    ++P +  F
Sbjct: 367 YVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAF 426

Query: 452 SSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK 511
           +  + AC+   +LD G Q+HS  I+  +++ ++  NALI MY++CG +  A   F  M  
Sbjct: 427 AGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY 486

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
            + VSWNAMI   + HG   +A+ LF +M + +  P+++TF+ +L+AC++AGL+ +G+  
Sbjct: 487 VDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHY 546

Query: 572 FKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQK 631
           F +M   Y I P  +HY  ++ LL R G F +A  +I  +PF+    +W ALL  C +  
Sbjct: 547 FDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHG 606

Query: 632 NIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
           N++LG   A  +LE+ P  DGT+++LSNMYA   +WD VA VR  M+ +GVKKEPG SWV
Sbjct: 607 NMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWV 666

Query: 692 ENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWV 751
           E + +VH F V D  HP+ + +   L+ L  + +  GYVPD   VL D+E + KE  L  
Sbjct: 667 EVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLST 726

Query: 752 HSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQH 811
           HSE+LA+ +G++++P   +IR+ KNLRIC DCH   K IS+VV+REIVVRD  RFHHF++
Sbjct: 727 HSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKN 786

Query: 812 GVCSCGDYW 820
           G CSCG+YW
Sbjct: 787 GECSCGNYW 795



 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 41/375 (10%)

Query: 89  YVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVC 148
           YV+ D L  A +L D +     +++  +  G  R   ++ A     R+   G + + +  
Sbjct: 227 YVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTY 286

Query: 149 TTIIKLLVS----MDLPHVCWTIHA----CVYKRGHQADAFVGTSLIDAYSVCGNVDAAR 200
           T++I    S    M + +    +H      V +  H     V  +LI  Y+    +  AR
Sbjct: 287 TSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEAR 346

Query: 201 QVFDGIFCKDMVSW-------------------------------TGMVGCYAENCFYEE 229
           +VFD +  +D++SW                               T M+   A+N F EE
Sbjct: 347 RVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
            L+LF QM+  G  P +Y    A+ +C  L +   G+ +H   ++  +D  L  G  L+ 
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALIT 466

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
           +Y++ G +  A+  F  MP  D + W+ MIA  AQ     +A+ELF  M +  ++P+  T
Sbjct: 467 MYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRIT 526

Query: 350 FASVLQACAAQVLLILGKQIHSNV-LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           F ++L AC    L+  G+     +  + G+         L+D+  + G    +  +    
Sbjct: 527 FLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSM 586

Query: 409 P-EQNEVTWNTMIVG 422
           P E     W  ++ G
Sbjct: 587 PFEAGAPIWEALLAG 601



 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 142/356 (39%), Gaps = 88/356 (24%)

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPE------------- 410
           I+ + +H+++L  G   N F+ N L+++Y K   I  +  LF + P+             
Sbjct: 22  IIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAY 81

Query: 411 --------------------QNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
                               ++ V++N MI  Y    DG  A+NLF  M      P   T
Sbjct: 82  SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141

Query: 451 FSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGR---------IN 500
           FSSVL A +  A  +   Q +H   IK       +V NAL+  Y  C           + 
Sbjct: 142 FSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201

Query: 501 DARLTFDKMDKRE---------------------------------EVSWNAMICGYSMH 527
            AR  FD+  K +                                 +V+WNAMI GY   
Sbjct: 202 SARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR 261

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN----AGLLDKGQSLFKSMSQDYNIEP 583
           GL  EA + F +M     + ++ T+  ++SAC +     G+ + G+ +   + +   +EP
Sbjct: 262 GLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTV-VEP 320

Query: 584 CIEHYTCMV--GLLGRLGKFD---EAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
              H+   V   L+    K+D   EA ++  ++P +  ++ W A+L   V  + I+
Sbjct: 321 S-HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIE 374


>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:1841187-1847304 | 20130731
          Length = 880

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/640 (36%), Positives = 369/640 (57%), Gaps = 41/640 (6%)

Query: 221 YAENCFYEESLQLFCQMRVMGY---------RPNNYTITAALKSCLGLEAFGVGKSVHGC 271
           ++E+  +EE ++LFCQ   +           +P+    +  + +CL      +GK VH  
Sbjct: 29  HSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAH 88

Query: 272 ALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK-- 329
              + +   + +   L+ +YAK G +VDAQ+ F+E+P+KD+  W+ MI+ YA   R +  
Sbjct: 89  TKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQA 148

Query: 330 -----------------------------EALELFHCMRQS-SVVPNNFTFASVLQACAA 359
                                        EAL+LF  M+++ S   N FT +S L A AA
Sbjct: 149 RKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAA 208

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
              L  GK+IH  +++ GL+ +  V  AL+D+Y KCG +  +  +F +  +++ V+W TM
Sbjct: 209 ISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTM 268

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           I    + G  ++  +LF  ++G+ ++P E TF+ VL ACA  AA   G +VH    +  Y
Sbjct: 269 IHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGY 328

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
           +     A+AL+ +Y+KCG    AR  F++M + + VSW ++I GY+ +G    AL  F  
Sbjct: 329 DPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFES 388

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           + ++  KP+++TFVGVLSAC++AGL+D G   F S+ + + +    +HY C++ LL R G
Sbjct: 389 LLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSG 448

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN 659
           +F EA  +I  +P +P   +W +LLG C +  NI+L    A+ + E++P +  T++ LSN
Sbjct: 449 RFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSN 508

Query: 660 MYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEW 719
           +YA A  W     VR +M  +G+ K+PG SW+E +  VH F VGDTSHP    I   L  
Sbjct: 509 IYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGE 568

Query: 720 LNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRI 779
           L+KK ++ GYV D N VL DVE+++KE++++ HSE+LA+AFG++       I++ KNLR 
Sbjct: 569 LSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRT 628

Query: 780 CVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDY 819
           CVDCH  +K IS++VQR+I+VRD NRFH F  G CSC DY
Sbjct: 629 CVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  208 bits (529), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 244/491 (49%), Gaps = 24/491 (4%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           ++  + Q + L +A      +P  +   + TL   C R        H  L L K  H  +
Sbjct: 38  IIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLR--------HRKLELGKRVH-AH 88

Query: 145 PFVCTTIIKLLVSMDLPHV---CWTI--HACVYKRGHQADAFVGTSLIDAYSVCGNVDAA 199
                 I  +++S  L H+   C ++     ++    Q D     ++I  Y+  G ++ A
Sbjct: 89  TKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQA 148

Query: 200 RQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV-MGYRPNNYTITAALKSCLG 258
           R++FD +  +D  SW  ++  Y    +Y E+L LF  M+       N +T+++AL +   
Sbjct: 149 RKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAA 208

Query: 259 LEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLM 318
           + +   GK +HG  +++  + D  V T LL+LY K G + +A+  F++M  KD++ W+ M
Sbjct: 209 ISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTM 268

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           I R  +  R KE   LF  +  S V PN +TFA VL ACA      +GK++H  + +VG 
Sbjct: 269 IHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGY 328

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
           D   F ++AL+ VY+KCG  E +  +F + P  + V+W ++IVGY Q G  + A+  F S
Sbjct: 329 DPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFES 388

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCG 497
           ++ +  +P E+TF  VL AC     +D GL+  HS+  K    +       +ID+ A+ G
Sbjct: 389 LLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSG 448

Query: 498 RINDARLTFDKMD-KREEVSWNAMICGYSMHG---LSTEALNLFNKMQQTNCKPNKLTFV 553
           R  +A    D M  K ++  W +++ G  +HG   L+  A     +++      N  T++
Sbjct: 449 RFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPE----NPATYI 504

Query: 554 GVLSACSNAGL 564
            + +  +NAGL
Sbjct: 505 TLSNIYANAGL 515



 Score =  161 bits (408), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 5/349 (1%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           DL + N +++ Y     ++ A KLFDEMP  +  S+  +  G      +  AL  + R+ 
Sbjct: 128 DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALD-LFRMM 186

Query: 138 KEGHEV--NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGN 195
           +E      N F  ++ +    ++        IH  + + G + D  V T+L+D Y  CG+
Sbjct: 187 QENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGS 246

Query: 196 VDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
           ++ AR +FD +  KD+VSWT M+    E+   +E   LF  +   G RPN YT    L +
Sbjct: 247 LNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNA 306

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
           C  L A  +GK VHG   +  YD   +  + L+ +Y+K G+   A+  F +MP+ D++ W
Sbjct: 307 CADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSW 366

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILG-KQIHSNVL 374
           + +I  YAQ+ +   AL+ F  + +S   P+  TF  VL AC    L+ +G +  HS   
Sbjct: 367 TSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKE 426

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVG 422
           K GL         ++D+ A+ G  + +  +    P + ++  W +++ G
Sbjct: 427 KHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG 475



 Score =  110 bits (275), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 14/266 (5%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GK++H  +++ G  LD      LL+ Y +   L++A  +FD+M   + +S+ T+   C  
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
             +      +   L   G   N +    ++     +    +   +H  + + G+   +F 
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
            ++L+  YS CGN + AR+VF+ +   D+VSWT ++  YA+N   + +LQ F  +   G 
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394

Query: 243 RPNNYTITAALKSC-------LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSG 295
           +P+  T    L +C       +GLE F   K  HG    A    D Y    +++L A+SG
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTA----DHYAC--VIDLLARSG 448

Query: 296 DIVDAQLFFEEMP-KKDVIPWSLMIA 320
              +A+   + MP K D   W+ ++ 
Sbjct: 449 RFKEAENIIDNMPMKPDKFLWASLLG 474


>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:30342642-30345393 | 20130731
          Length = 755

 Score =  440 bits (1131), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/713 (33%), Positives = 380/713 (53%), Gaps = 48/713 (6%)

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
            S+  P     +H   +K+G          L+  Y    N+D A ++FD I  K+  +WT
Sbjct: 43  TSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWT 102

Query: 216 GMVGCYAENCFYEE-SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
            ++  +A      E    LF +M+  G  PN YT+++ LK C        GK +H   L+
Sbjct: 103 ILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILR 162

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
                D+ +   +L+LY K  +   A+ FFE M +KDV+ W++MI  Y +    +++LE+
Sbjct: 163 NGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEM 222

Query: 335 FHCMRQSSVVPNN-------------------------------FTFASVLQACAAQVLL 363
           F       VV  N                                TF+  L   ++  L+
Sbjct: 223 FRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLV 282

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME---------------- 407
            +G+Q+H  VL  GL+S+ ++ ++L+++Y KCG ++ +  +  +                
Sbjct: 283 EVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCK 342

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
            P+   V+W++M+ GYV  G  E  M  F SM+   +     T ++++ ACA    L+ G
Sbjct: 343 EPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFG 402

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
            Q+H+   K     D  V ++LIDMY+K G ++DA + F+++ +   V W +MI G ++H
Sbjct: 403 KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALH 462

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           G   EA++LF  M      PN++TFVGVL+ACS+ GL+++G   F+ M   Y+I P +EH
Sbjct: 463 GQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEH 522

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMK 647
           YT MV L GR G   EA   I E        VWR+ L +C + KN ++G+  ++ +L+  
Sbjct: 523 YTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSA 582

Query: 648 PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSH 707
           P D   ++LLSNM +   +WD  A VR  M ++GVKK+PG SWV+ +  +H F+VGD SH
Sbjct: 583 PSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSH 642

Query: 708 PDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPS 767
           P +K I + L+ L  + ++ GY  D   V+ DVE+++ E  +  HSE+LAL F ++    
Sbjct: 643 PQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSP 702

Query: 768 TCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
              IRI+KNLRIC DCH   K  S++++REI+VRD +RFHHF+   CSCG+YW
Sbjct: 703 RTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  196 bits (498), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 245/523 (46%), Gaps = 60/523 (11%)

Query: 60  PNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQG 119
           P + + LH    K+G+   L + N LL  YV+   LD A KLFDE+   NT ++  L  G
Sbjct: 48  PPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISG 107

Query: 120 CSRSHQFDHALHVILRLFKE----GHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRG 175
            +R+     +  ++  LF+E    G   N +  ++++K     +       IHA + + G
Sbjct: 108 FARAAG---SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNG 164

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLF- 234
              D  +  S++D Y  C   + A   F+ +  KD+VSW  M+G Y      E+SL++F 
Sbjct: 165 VGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFR 224

Query: 235 -------------------CQMRVMG-------------YRPNNYTITAALKSCLGLEAF 262
                              C    +              + P  ++I   L S L L   
Sbjct: 225 NFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSL--V 282

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM--------------- 307
            VG+ +HG  L    + D Y+ + L+E+Y K G +  A    +++               
Sbjct: 283 EVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCK 342

Query: 308 -PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILG 366
            PK  ++ WS M++ Y  + + ++ ++ F  M    +V +  T A+++ ACA   +L  G
Sbjct: 343 EPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFG 402

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           KQIH+ + K+GL  + +V ++L+D+Y+K G +++++++F +  E N V W +MI G    
Sbjct: 403 KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALH 462

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY-NNDIAV 485
           G G++A++LF  M+   + P EVTF  VL AC+    ++ G +   +   T + N ++  
Sbjct: 463 GQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEH 522

Query: 486 ANALIDMYAKCGRINDAR-LTFDKMDKREEVSWNAMICGYSMH 527
             +++++Y + G + +A+   F+         W + +    +H
Sbjct: 523 YTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLH 565


>Medtr5g006420.1 | organelle transcript processing protein, putative
           | HC | chr5:911890-915336 | 20130731
          Length = 726

 Score =  438 bits (1126), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/632 (36%), Positives = 363/632 (57%), Gaps = 34/632 (5%)

Query: 222 AENCFYEESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           + + F E+++ L+  +R +  +  + ++  + LK+   + AF  G  +HG A K  +  D
Sbjct: 96  SRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDD 155

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
            ++ T L+ +YA    I+DA+L F++M   D + W+++I  Y Q+    +AL LF  MR 
Sbjct: 156 PFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRS 215

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE--- 397
           S + P++    +VL AC     L  G+ IH  V   G   +  +  AL+++YA CG    
Sbjct: 216 SDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDL 275

Query: 398 ----------------------------IENSMILFMESPEQNEVTWNTMIVGYVQLGDG 429
                                       ++++  +F +  E++ V W+ MI GY +    
Sbjct: 276 ARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQP 335

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANAL 489
           ++A+ LF  M+     P ++T  SV+ AC+   AL     +H+   ++ +   ++V NAL
Sbjct: 336 QEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNAL 395

Query: 490 IDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNK 549
           IDMYAKCG +  AR  F+ M ++  +SW++MI  ++MHG +  A+ LF +M++ N +PN 
Sbjct: 396 IDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455

Query: 550 LTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIG 609
           +TF+GVL AC +AGL+++G+ LF SM  ++ I P  EHY CMV L  R     +A++LI 
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515

Query: 610 EIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDN 669
            +PF P+V++W +L+ AC V    +LG F A+ +LE++P  DG  V+LSN+YA  KRW++
Sbjct: 516 TMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWND 575

Query: 670 VASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGY 729
           V  +RK+M  KG+ KE   S +E    VH F + D  H  +  I   L+ +  K +  GY
Sbjct: 576 VGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGY 635

Query: 730 VPDCNAVLLDV-EDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIK 788
            P  + +L+D+ E+D+KE  LW HSE+LA+ +GL+   +   IRI+KNLRIC DCH+ +K
Sbjct: 636 KPSTSGILIDLEEEDKKELVLW-HSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMK 694

Query: 789 LISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           L+S+V Q EIVVRD  RFHH   G+CSC DYW
Sbjct: 695 LVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  148 bits (374), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 204/427 (47%), Gaps = 43/427 (10%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD  S+ +LL+   +    N G ++H    K G   D F    L+  Y     + DA  L
Sbjct: 119 LDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLL 178

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKE--GHEVNP---FVCTTIIKLLV 156
           FD+M   + +++  +  G  ++  +D AL    RLF++    ++ P    +CT +     
Sbjct: 179 FDKMCHPDAVAWNMIIDGYCQNGHYDDAL----RLFEDMRSSDMKPDSVILCTVLSACGH 234

Query: 157 SMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK------- 209
           + +L +   TIH  V   G+  D+ + T+LI+ Y+ CG +D AR+++DG+  K       
Sbjct: 235 AGNLSY-GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTA 293

Query: 210 ------------------------DMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPN 245
                                   D+V W+ M+  YAE+   +E+L+LF +M      P+
Sbjct: 294 MLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPD 353

Query: 246 NYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFE 305
             T+ + + +C  + A      +H    ++ + + L V   L+++YAK G++V A+  FE
Sbjct: 354 QITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFE 413

Query: 306 EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
            MP+K+VI WS MI  +A    +  A++LF  M++ ++ PN  TF  VL AC    L+  
Sbjct: 414 NMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEE 473

Query: 366 GKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVGY 423
           G+++ S+++ + G+         ++D+Y +   +  ++ L    P   N + W +++   
Sbjct: 474 GEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSAC 533

Query: 424 VQLGDGE 430
              G+ E
Sbjct: 534 QVHGEAE 540



 Score =  147 bits (370), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 34/363 (9%)

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ-SSVVPNNFTFASVLQACAAQVL 362
           F ++P       + ++   ++S   ++ + L+H +R  ++   + F+F S+L+A +    
Sbjct: 77  FSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSA 136

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
              G +IH    K+G   + F+   L+ +YA C  I ++ +LF +    + V WN +I G
Sbjct: 137 FNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDG 196

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
           Y Q G  + A+ LF  M  +DM+P  V   +VL AC     L  G  +H       Y  D
Sbjct: 197 YCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAID 256

Query: 483 IAVANALIDMYAKCGR-------------------------------INDARLTFDKMDK 511
             +  ALI+MYA CG                                + DAR  FD+M +
Sbjct: 257 SHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           R+ V W+AMI GY+      EAL LF++M Q    P+++T + V+SACS+ G L +   +
Sbjct: 317 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWI 376

Query: 572 FKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQK 631
              + +       +     ++ +  + G   +A ++   +P + +V+ W +++ A  +  
Sbjct: 377 HTYVDRS-GFGRALSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHG 434

Query: 632 NID 634
           N D
Sbjct: 435 NAD 437


>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:3530268-3532784 | 20130731
          Length = 696

 Score =  438 bits (1126), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/573 (38%), Positives = 346/573 (60%), Gaps = 1/573 (0%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           T  A + +C+ L +    K V      + ++ DLY+   +L ++ +   + DA+ +F++M
Sbjct: 125 TYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDM 184

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
           P++D   W  MI     S    EA ELF CM +      + TFA++++A A    + +G+
Sbjct: 185 PERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDCIEVGR 244

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           QIH+ +LK  ++ + FV  AL+D+Y+KCG IE++  +F + P++  V WNT+I GY   G
Sbjct: 245 QIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFRG 304

Query: 428 DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN 487
             E+A+ ++  M  +  +    T S V+  CA  A+L+ G Q H+  ++  +  D+   +
Sbjct: 305 FSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGTDLVANS 364

Query: 488 ALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           AL++ Y+K GR+ +AR  FDKM ++  +SWNA+I GY  HG   EA+ +F KM Q N  P
Sbjct: 365 ALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTP 424

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKL 607
           N +TF+ VLSACS +GL ++G  +F+SMSQD+NI+P   HY CM+ LLGR G  DEAV L
Sbjct: 425 NHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYACMIELLGREGLLDEAVAL 484

Query: 608 IGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRW 667
           I   PF P++ +W ALL AC + KN++LG+F A+ +  M+P     +V+L N+Y  + + 
Sbjct: 485 IRNAPFPPTLNMWAALLIACRMHKNLELGKFAAEKLYGMEPEKLCNYVMLLNIYNSSGKL 544

Query: 668 DNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDA 727
              A V + +KRKG++  P  +W+E     H F  GD SH   K I   ++ L  +    
Sbjct: 545 KEAADVLQTLKRKGLRMLPAYTWIEVNKQPHAFLCGDKSHKQTKKIYKKVDSLMVEISRH 604

Query: 728 GYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVI 787
           GYV +   +L DV D+E++R +  HSE+LA+AFG++  P    ++I +  R+C DCH  I
Sbjct: 605 GYVMEKETLLPDV-DEEEQRVIKYHSEKLAIAFGIMNTPDWLPLQITQRHRVCGDCHNAI 663

Query: 788 KLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           KLI+ V  REIV+RD +RFH F++G CSCG+YW
Sbjct: 664 KLITLVTGREIVLRDASRFHRFKNGSCSCGNYW 696



 Score =  182 bits (461), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 175/330 (53%)

Query: 44  SHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFD 103
           + +Y AL+   I+ R     K++   +   G  LDL+  N +L  +VQ + + DA   FD
Sbjct: 123 ASTYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFD 182

Query: 104 EMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV 163
           +MP  ++ S++T+  G   S  +  A  + L +++E +         +++    +D   V
Sbjct: 183 DMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDCIEV 242

Query: 164 CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
              IH C+ KR    D FV  +LID YS CGN++ AR VFD +  K  V W  ++  YA 
Sbjct: 243 GRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAF 302

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
             F EE+L ++ +MR  G + +++TI+  +  C  L +   GK  H   ++  +  DL  
Sbjct: 303 RGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGTDLVA 362

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
            + L+  Y+K G + +A+  F++M +K++I W+ +IA Y    R +EA+E+F  M Q ++
Sbjct: 363 NSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENM 422

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            PN+ TF +VL AC+   L   G +I  ++
Sbjct: 423 TPNHVTFLAVLSACSYSGLSERGWEIFQSM 452


>Medtr4g131300.1 | PPR containing plant-like protein | HC |
           chr4:54775340-54772788 | 20130731
          Length = 734

 Score =  437 bits (1125), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/701 (36%), Positives = 380/701 (54%), Gaps = 9/701 (1%)

Query: 40  PPLDSHSYAALLQQAIQ---NRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLD 96
           P +    +  LLQ  I+   N++   G+ LH  ILK G+   ++  N  LN Y + + L 
Sbjct: 4   PKIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLS 63

Query: 97  DASKLFDEMPLTNT--ISFVTLAQGCSRSHQFDHALHVI--LRLFKEGHEVNPFVCTTII 152
            A  LFD +   +   +S+ +L    S++H    +   I   R     + V P   T   
Sbjct: 64  HALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAG 123

Query: 153 KLLVSMDLPHVCW--TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD 210
               + +L  V      H+   K G   D +VG+SL++ Y   G V  AR++FD +  ++
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERN 183

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHG 270
            VSW  M+  YA +   ++++++F  MR      N + +T+ L +         G+ VH 
Sbjct: 184 TVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS 243

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
            A+K      + V   L+ +YAK G + DA   FE    K+ I WS M+  YAQ   S +
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD 390
           AL+LF+ M  S V+P+ FT   V+ AC+    ++ GKQ+HS   K+G    ++V +A++D
Sbjct: 304 ALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVD 363

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           +YAKCG + ++   F    + + V W ++I GYVQ GD E  +NL+  M    + P E+T
Sbjct: 364 MYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELT 423

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD 510
            +SVLRAC+  AALD G Q+H+  IK  +  ++ + +AL  MY KCG ++D  L F +M 
Sbjct: 424 MASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP 483

Query: 511 KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQS 570
            R+ +SWNAMI G S +G   +AL LF KM     KP+ +TFV +LSACS+ GL+D+G  
Sbjct: 484 SRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWE 543

Query: 571 LFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQ 630
            FK M  ++NI P +EHY CMV +L R GK +EA + I        + +WR LLGAC   
Sbjct: 544 YFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNH 603

Query: 631 KNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSW 690
           +N +LG +  + ++E+   +   +VLLS++Y      +NV  VR+ MK +GV KEPG SW
Sbjct: 604 RNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSW 663

Query: 691 VENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
           +E +G+VH F VGD  HP    I   LE L K   D GY P
Sbjct: 664 IELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704


>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:28741911-28744729 | 20130731
          Length = 786

 Score =  437 bits (1123), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/675 (35%), Positives = 375/675 (55%), Gaps = 37/675 (5%)

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           +G  LI      G+ + ARQ+FD I   D  + + ++     +    E+++++  ++  G
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73

Query: 242 YRPNNYTITAALKSC-LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
            +P+     AA K+C +  +A  V K VH  A +     D++VG  L+  Y K   +  A
Sbjct: 74  IKPDMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           +  F+++  +DV+ W+ + + Y +    ++ +++F  M  S V PN  T +S+L ACA  
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN-------- 412
             L  GK+IH   ++ G+  N+FV +AL+ +YAKC  +  + ++F   P ++        
Sbjct: 193 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 252

Query: 413 ---------------------------EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
                                      E TWN +I G ++ G  E+A+ +F  M     +
Sbjct: 253 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 312

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLT 505
           P E+T SS+L AC+    L  G ++H    +     D+    AL+ MYAKCG +N +R  
Sbjct: 313 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNV 372

Query: 506 FDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLL 565
           FD M +++ V+WN MI   +MHG   EAL LF+KM  +  +PN +TF GVLS CS++ L+
Sbjct: 373 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLV 432

Query: 566 DKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLG 625
           ++G  +F SM +D+ +EP   HY+C+V +  R G+ +EA K I  +P +P+   W ALL 
Sbjct: 433 EEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 492

Query: 626 ACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKE 685
           AC V KN++L +  A+ + E++P++ G +V L N+   AK W   + VR  MK +G+ K 
Sbjct: 493 ACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKT 552

Query: 686 PGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEK 745
           PG SW++    VH F VGD S+ ++  I   L+ L +K + AGY PD + VL D++ +EK
Sbjct: 553 PGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEK 612

Query: 746 ERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINR 805
              L  HSE+LA+AFG+L +    +IR+ KNLRIC DCH  IK +S+VV   IVVRD  R
Sbjct: 613 AESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLR 672

Query: 806 FHHFQHGVCSCGDYW 820
           FHHF++G CSC D W
Sbjct: 673 FHHFKNGNCSCKDLW 687



 Score =  206 bits (524), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 231/465 (49%), Gaps = 39/465 (8%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN-PFVCTTIIK 153
            + A +LFD +P  +  +  TL    +     + A+ +   L + G + + P        
Sbjct: 28  FNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKA 87

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS 213
             VS D   V   +H    + G  +D FVG +LI AY  C  V+ AR+VFD +  +D+VS
Sbjct: 88  CAVSGDALRVK-EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVS 146

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           WT +  CY +  F  + + +F +M   G +PN  T+++ L +C  L+    GK +HG A+
Sbjct: 147 WTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 206

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY----------- 322
           +     +L+V + L+ LYAK   + +A++ F+ MP +DV+ W+ ++  Y           
Sbjct: 207 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFS 266

Query: 323 ------------------------AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
                                    ++ RS+EA+E+F  M++    PN  T +S+L AC+
Sbjct: 267 LFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACS 326

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
               L +GK+IH  V +     ++  + AL+ +YAKCG++  S  +F     ++ V WNT
Sbjct: 327 FSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNT 386

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTIKT 477
           MI+     G+G++A+ LF  M+ + +QP  VTF+ VL  C+    ++ G+Q+ +S+    
Sbjct: 387 MIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDH 446

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMI 521
               D    + ++D+Y++ GR+N+A      M      S W A++
Sbjct: 447 LVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491



 Score =  157 bits (396), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 190/402 (47%), Gaps = 34/402 (8%)

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           ++G  L+ +    GD   A+  F+ +P+ D    S +I+       S EA++++  +++ 
Sbjct: 13  HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            + P+   F +  +ACA     +  K++H +  + G+ S+VFV NAL+  Y KC  +E +
Sbjct: 73  GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F +   ++ V+W ++   YV+ G   K M++F  M  + ++P  +T SS+L ACA  
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
             L  G ++H   ++     ++ V +AL+ +YAKC  + +AR+ FD M  R+ VSWN ++
Sbjct: 193 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 252

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             Y  +    +  +LF KM +   + ++ T+  V+  C   G  ++   +F+ M +    
Sbjct: 253 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK---- 308

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
                                        + F+P+ +   ++L AC   +N+ +G+    
Sbjct: 309 -----------------------------MGFKPNEITISSILPACSFSENLRMGKEIHC 339

Query: 642 HVLE-MKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGV 682
           +V    K  D  +   L  MYA     +   +V   M+RK V
Sbjct: 340 YVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDV 381



 Score =  154 bits (388), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 187/398 (46%), Gaps = 41/398 (10%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K++H D  + G   D+F  N L++ Y +  C++ A ++FD++ + + +S+ +L+    + 
Sbjct: 98  KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 157

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
                 + V   +   G + NP   ++I+     +        IH    + G   + FV 
Sbjct: 158 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVC 217

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFY---------------- 227
           ++L+  Y+ C +V  AR VFD +  +D+VSW G++  Y +N  Y                
Sbjct: 218 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 277

Query: 228 -------------------EESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSV 268
                              EE++++F +M+ MG++PN  TI++ L +C   E   +GK +
Sbjct: 278 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 337

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS 328
           H    +     DL   T LL +YAK GD+  ++  F+ M +KDV+ W+ MI   A     
Sbjct: 338 HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNG 397

Query: 329 KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK---VGLDSNVFVS 385
           KEAL LF  M  S V PN+ TF  VL  C+   L+  G QI +++ +   V  D+N +  
Sbjct: 398 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY-- 455

Query: 386 NALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVG 422
           + ++D+Y++ G +  +       P E     W  ++  
Sbjct: 456 SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493


>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:28350546-28353833 | 20130731
          Length = 770

 Score =  435 bits (1118), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/672 (35%), Positives = 380/672 (56%), Gaps = 26/672 (3%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IH  + K G   D F+ + L+  Y+ CG ++ A+QVFD +  ++ V+WT ++  Y +N  
Sbjct: 100 IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 159

Query: 227 YEESLQLFCQMRVMGY-RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
            + ++ LF +M +     P+NYT+  AL +C  L +  +G+ +H   +K   D D  +G 
Sbjct: 160 PKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGN 219

Query: 286 ELLELYAKSGDIVDAQLF-FEEMPKKDVIPWSLMIARYAQSDRSKEALELF--HCMRQSS 342
            L  LY K G  ++  L  F  + +KDVI W+  I+   +   + + + +F    + +  
Sbjct: 220 ALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQ 279

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           V PN +T  S L  C     L LG Q+H+   K+G +SN+ V N+L+ +Y KCG I  + 
Sbjct: 280 VQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQ 339

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGD-----------GEKAMNLFSSMIGNDMQPTEVTF 451
            LF    + N VTWN MI G+ Q+ +           G +A+NLFS +  + M+P   TF
Sbjct: 340 RLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTF 399

Query: 452 SSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK 511
           SSVL  C+   AL+ G Q+H+ TIKT + +D+ V +++I+MY KCG I  A   F +M  
Sbjct: 400 SSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSI 459

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           R  + W  MI G++ HG S +ALNLF  M+    +PN +TFVGVLSAC +AG++++  + 
Sbjct: 460 RTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNY 519

Query: 572 FKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQK 631
           F+ M ++Y I+P ++HY C+V +L RLG+  EA  LI ++ ++ S  +W  L+  C+ Q 
Sbjct: 520 FEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQG 579

Query: 632 NIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
           N++LG   A+ +L +KP D  T+ LL N Y  A R+D+V+ V   M+ + + +    SW+
Sbjct: 580 NLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWI 639

Query: 692 ENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERH--- 748
             +  V+ F   D +  ++  I   LE L+ K ++ GY      +L  VE  +KE+    
Sbjct: 640 SIKDRVYSFQTNDKADIESS-IGKSLEDLHIKAKNLGY-----EMLEYVEKSDKEKEKTS 693

Query: 749 --LWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRF 806
                HSE+LA+ FGL  +P++  +R++KN  +C D H  +K IS +  REI+V+D  R 
Sbjct: 694 SPTIYHSEKLAITFGLENLPNSSPVRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRL 753

Query: 807 HHFQHGVCSCGD 818
           H F +G CSCG+
Sbjct: 754 HKFVNGQCSCGN 765



 Score =  229 bits (583), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 254/501 (50%), Gaps = 21/501 (4%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +DS  Y  LLQQ ++N   ++ + +HC I+K G+  D F  + L+  Y +   ++ A ++
Sbjct: 76  VDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQV 135

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVI--LRLFKEGHEVNPFVCTTIIKLLVSMD 159
           FD M   N +++  L +G  ++    HA+H+   + L  E +  N +     +    S+ 
Sbjct: 136 FDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSN-YTLAIALNACTSLH 194

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVC-GNVDAARQVFDGIFCKDMVSWTGMV 218
              +   +HA + K     D  +G +L   Y+ C G ++     F  I  KD++SWT  +
Sbjct: 195 SLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAI 254

Query: 219 GCYAENCFYEESLQLFCQMRV--MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC 276
               E     + +++F +M +  +  +PN YT+T+AL  C  ++   +G  VH    K  
Sbjct: 255 SACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLG 314

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS----------- 325
           Y+ +L V   LL LY K G IV+AQ  F+ M   +++ W+ MIA +AQ            
Sbjct: 315 YESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAY 374

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
            +  EAL LF  + +S + P+ FTF+SVL  C+  + L  G+QIH+  +K G  S+V V 
Sbjct: 375 QKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVG 434

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
           ++++++Y KCG IE +  +F+E   +  + W TMI G+ Q G  ++A+NLF  M    ++
Sbjct: 435 SSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIR 494

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDAR 503
           P  VTF  VL AC     ++       + ++  Y     + +   L+DM  + G++ +A 
Sbjct: 495 PNLVTFVGVLSACGSAGMVNEAFNYFEI-MQKEYKIKPVMDHYVCLVDMLVRLGQVQEAF 553

Query: 504 LTFDKMD-KREEVSWNAMICG 523
               KMD K  E  W+ +I G
Sbjct: 554 DLIKKMDYKASEFIWSNLIVG 574



 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           I+ +   +R+ +  E F   ++S+   ++  +  +LQ C         + IH +++K G 
Sbjct: 50  ISTHLDPNRNLKFQEAFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGS 109

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
             + F+S+ L+ VYAKCG +E +  +F     +N V W  ++ GYVQ    + A++LF  
Sbjct: 110 HEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEE 169

Query: 439 M-IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCG 497
           M + ++  P+  T +  L AC    +L  G Q+H+  IK   + D ++ NAL  +Y KCG
Sbjct: 170 MLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCG 229

Query: 498 RINDARLT-FDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM--QQTNCKPNKLTFVG 554
              +  LT F ++ +++ +SW A I      G + + + +F +M   +   +PN+ T   
Sbjct: 230 GKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTS 289

Query: 555 VLSACSNAGLLDKG 568
            LS C     L+ G
Sbjct: 290 ALSQCCEVKCLELG 303


>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:5362710-5366096 | 20130731
          Length = 654

 Score =  434 bits (1117), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/599 (37%), Positives = 351/599 (58%), Gaps = 10/599 (1%)

Query: 228 EESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTEL 287
           ++++QL C        P   T    + SC+   +   G  VH   + +  DQD Y+ T+L
Sbjct: 60  KQAVQLLC----CEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKL 115

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNN 347
           + +Y   G +  A   F+E  +K +  W+ +    A + R ++ L L+  M    +  N 
Sbjct: 116 INMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNR 175

Query: 348 FTFASVLQACAAQVLLIL----GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
           FT+  VL+AC    L I     GK+IH+++L+ G + +V V   L+DVYA+ G +  +  
Sbjct: 176 FTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASS 235

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI--GNDMQPTEVTFSSVLRACAGF 461
           +F   P++N V+W+ MI  Y +     KA+ LF  M+    D  P  +T  SVL+ACA  
Sbjct: 236 VFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASL 295

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
           AAL+ G  VH+  ++   ++ + V N LI MY +CG I+  +  FD M KR+ +SWN++I
Sbjct: 296 AALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLI 355

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             Y MHGL  +A+ +F  M      P+ +TF+ VL ACS+AGL+++ + LF+SM   Y I
Sbjct: 356 SIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRI 415

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
            P +EHY CMV +LGR  + DEA++LI  + F+P   VW +LLG+C +  N++L    + 
Sbjct: 416 HPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASA 475

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
            + E++P + G +VLLS++YA ++ W++V  VRK ++ +G++K P  SW+E +  ++   
Sbjct: 476 MLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLV 535

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
             +  +P  + +CA L  L  + ++ GYVP  N V  D++++EKER +  HS +LA+AFG
Sbjct: 536 SIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFG 595

Query: 762 LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           L+       IRI  NLR+C DCH  +K +S+   REI++RD+NRFH F+ GVCSCGDYW
Sbjct: 596 LINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  140 bits (353), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 165/343 (48%), Gaps = 8/343 (2%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
           +P     ++  L+   I+    + G  +H  ++  G   D +    L+N Y     +D A
Sbjct: 69  EPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHA 128

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
            K+FDE        +  + +  + + + +  L +  ++   G   N F  T ++K  V  
Sbjct: 129 CKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVS 188

Query: 159 DLPHVC-----WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS 213
           +L  +C       IHA + + G++    V T+L+D Y+  G V  A  VF  +  K++VS
Sbjct: 189 ELS-ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVS 247

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMG--YRPNNYTITAALKSCLGLEAFGVGKSVHGC 271
           W+ M+ CYA+N    ++L+LF  M +      PN  T+ + L++C  L A   GK VH  
Sbjct: 248 WSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAY 307

Query: 272 ALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEA 331
            L+   D  L V   L+ +Y + G+I   Q  F+ M K+DVI W+ +I+ Y      K+A
Sbjct: 308 VLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKA 367

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           +++F  M    V P+  TF +VL AC+   L+   K +  ++L
Sbjct: 368 IQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESML 410


>Medtr1g012380.1 | PPR containing plant-like protein | HC |
           chr1:2444546-2447496 | 20130731
          Length = 600

 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/516 (42%), Positives = 325/516 (62%), Gaps = 3/516 (0%)

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFH-CMRQSSVVPNNFTFASVLQACAAQVLLILG 366
           P  D   ++ +I  Y+Q+  SK    LF+  M +  V PN FTF  VL+ CA    L LG
Sbjct: 85  PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGE--IENSMILFMESPEQNEVTWNTMIVGYV 424
           K +H  V+K G + +V V N L+ +Y   GE   E +  +F +SP+ + VTW+ MI G+V
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV 204

Query: 425 QLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
           +LG   +A++LF  M    + P E+T  SVL ACA   AL+ G  V S   K      + 
Sbjct: 205 RLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVE 264

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
           + NALIDM+AKCG ++ A   F +MD R  VSW ++I G +MHG   +A++LF++M +  
Sbjct: 265 LCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENG 324

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
             P+ + F+GVLSACS++GL+DKG+  F SM ++++I P +EHY CMV LL R G   EA
Sbjct: 325 ITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEA 384

Query: 605 VKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVA 664
            + + ++PF+P+ ++WR ++ AC     + LG   ++ +++ +P  +  +VLLSN+YA  
Sbjct: 385 FEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKL 444

Query: 665 KRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKT 724
           ++W+    VR+ M  +G+KK PG + +E    ++ F  GD SH   K I  M++ + ++ 
Sbjct: 445 RQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREI 504

Query: 725 RDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCH 784
           + AGYVP  + VLLD+++++KE  L+ HSE+LA+AF LL  P   SIRI+KNLR+C DCH
Sbjct: 505 KKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCH 564

Query: 785 TVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           +  K IS+V  REIVVRD NRFHHF++G+CSC D+W
Sbjct: 565 SATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600



 Score =  123 bits (309), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 13/270 (4%)

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM-ILFMES-------PEQNEVTWNTM 419
           QIH+ +LK GL +N  +        +    I  +   LF  S       P  +   +NT+
Sbjct: 36  QIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTL 95

Query: 420 IVGYVQLGDGEKAMNLF-SSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
           I  Y Q  D +    LF  +M+   + P + TF  VL+ CAG  +L  G  VH   +K  
Sbjct: 96  IRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFG 155

Query: 479 YNNDIAVANALIDMYAKCGR--INDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
           +  D+ V N LI MY   G      A   FD   K + V+W+AMI G+   G S+ A++L
Sbjct: 156 FEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDL 215

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLG 596
           F +MQ     P+++T V VLSAC++ G L+ G+ + +S  +  NI   +E    ++ +  
Sbjct: 216 FREMQVMGVCPDEITMVSVLSACADLGALELGKWV-ESYVEKKNIPKSVELCNALIDMFA 274

Query: 597 RLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           + G  D+A+KL  ++  + +++ W +++  
Sbjct: 275 KCGNVDKAIKLFRQMDSR-TIVSWTSVIAG 303


>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:27881892-27885186 | 20130731
          Length = 684

 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/581 (39%), Positives = 341/581 (58%), Gaps = 39/581 (6%)

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP----WSLMIARYAQSDRSKEALE 333
           D+D+ V + ++  Y++ G++  A+  F EM K+ V P    W+ MIA +       EA+ 
Sbjct: 26  DRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVR 85

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LFH M     +P+  T + VL        +++GKQ+H  V+K+GL+S+ +V +AL+D+Y 
Sbjct: 86  LFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYG 145

Query: 394 KCG----------EIENSMILFMES-------------------------PEQNEVTWNT 418
           +CG          EI+ + I  + +                          E N VTW +
Sbjct: 146 RCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTS 205

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
           +I   VQ G   +A+ LF  M  + ++P  VT  S++ AC   +AL  G ++H  +++  
Sbjct: 206 IIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKG 265

Query: 479 YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
             +D+ V +ALIDMYA CGRI  ++  FD+M  R  VSWN+++ GY+MHG + E + +F+
Sbjct: 266 IFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFH 325

Query: 539 KMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRL 598
            M Q+  KP+ +TF  VLSAC+  GL ++G   F SMS++Y+++P +EHY CMV LL R+
Sbjct: 326 MMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRV 385

Query: 599 GKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLS 658
           GK +EA  +I E+PF+P   VW ALL +C V  N+ LG   A+ +  ++P + G ++LLS
Sbjct: 386 GKLEEAYSIIKEMPFEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPGNYILLS 445

Query: 659 NMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLE 718
           N+YA    WD    VR  MK KG++K PG SW+E    VH    GD SHP  K I    E
Sbjct: 446 NIYASKGMWDEENRVRDMMKSKGLQKNPGCSWIEIGHRVHTLVSGDKSHPQMKEILEKSE 505

Query: 719 WLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLR 778
            L+ + +++G +P   +VL DVE+ +KE+ L  HSE+LA+  GL+       ++++KNLR
Sbjct: 506 KLSIEIKESGCLPMTKSVLQDVEEQDKEQILCGHSEKLAVVLGLINTSPGQPLQVIKNLR 565

Query: 779 ICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDY 819
           IC DCH VIK+IS +  REI VRD NRFHHF+ GVCSC D+
Sbjct: 566 ICDDCHAVIKVISRLEGREIFVRDTNRFHHFKEGVCSCADF 606



 Score =  173 bits (438), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 191/391 (48%), Gaps = 43/391 (10%)

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVF-----DGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
           D  V +++I  YS  GNVD A++VF     +G+   ++VSW GM+  +     Y+E+++L
Sbjct: 28  DVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE-PNLVSWNGMIAGFGNVGLYDEAVRL 86

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
           F +M   G+ P+  T++  L     LE   +GK VHG  +K   + D YV + LL++Y +
Sbjct: 87  FHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGR 146

Query: 294 SGDIVDAQLFFEEMPKKD-----------------------------------VIPWSLM 318
            G   +    F+E+ + +                                   V+ W+ +
Sbjct: 147 CGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSI 206

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           IA   Q+ +  EALELF  M+   V PN  T  S++ AC     L  GK+IH   L+ G+
Sbjct: 207 IASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGI 266

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
             +V+V +AL+D+YA CG I  S   F E P +N V+WN+++ GY   G  ++ + +F  
Sbjct: 267 FDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHM 326

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCG 497
           M+ +  +P  +TF+SVL AC      + G    +S++ +      +     ++ + ++ G
Sbjct: 327 MLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVG 386

Query: 498 RINDARLTFDKMD-KREEVSWNAMICGYSMH 527
           ++ +A     +M  + +   W A++    +H
Sbjct: 387 KLEEAYSIIKEMPFEPDACVWGALLSSCRVH 417



 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 180/408 (44%), Gaps = 72/408 (17%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           L++ Y++ + +DDA KLFD M   + I +  +  G SR    D A  V   + KEG E N
Sbjct: 4   LVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPN 63

Query: 145 PFVCTTIIKLL---------------------------VSMDLPHVC--------WTIHA 169
                 +I                              VS  LP V           +H 
Sbjct: 64  LVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHG 123

Query: 170 CVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGI----------------------- 206
            V K G ++D +V ++L+D Y  CG      +VFD I                       
Sbjct: 124 YVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDT 183

Query: 207 ----FCK--------DMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALK 254
               F K        ++V+WT ++    +N    E+L+LF  M+  G  PN  TI + + 
Sbjct: 184 ALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIP 243

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP 314
           +C  + A   GK +H  +L+     D+YVG+ L+++YA  G I  +Q  F+EMP ++++ 
Sbjct: 244 ACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVS 303

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           W+ +++ YA   ++KE +E+FH M QS   P++ TF SVL AC    L   G    +++ 
Sbjct: 304 WNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMS 363

Query: 375 K-VGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
           K   +   +     ++ + ++ G++E +  +  E P E +   W  ++
Sbjct: 364 KEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALL 411



 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 36/233 (15%)

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEK-------------- 431
           ++L+ +Y KC  I+++  LF    +++ + W+ MI GY +LG+ ++              
Sbjct: 2   SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61

Query: 432 ---------------------AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV 470
                                A+ LF  M+     P   T S VL        +  G QV
Sbjct: 62  PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQV 121

Query: 471 HSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLS 530
           H   IK    +D  V +AL+DMY +CG   +    FD++D+ E  S NA + G S +GL 
Sbjct: 122 HGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLV 181

Query: 531 TEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
             AL++F K +    + N +T+  ++++C   G   +   LF+ M  D  +EP
Sbjct: 182 DTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQAD-GVEP 233



 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 37/230 (16%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GKQ+H  ++K G   D +  + LL+ Y +  C  + S++FDE+  T   S      G SR
Sbjct: 118 GKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSR 177

Query: 123 SHQFDHALHVILRLFKEGH-EVNPFVCTTIIKLLV-----------------------SM 158
           +   D AL V  + FK G  E+N    T+II   V                       ++
Sbjct: 178 NGLVDTALDV-FKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAV 236

Query: 159 DLPHV---CWTIHACVY---------KRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGI 206
            +P +   C  I A  +         ++G   D +VG++LID Y+ CG +  ++  FD +
Sbjct: 237 TIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEM 296

Query: 207 FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
             +++VSW  ++  YA +   +E++++F  M   G +P++ T T+ L +C
Sbjct: 297 PFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSAC 346


>Medtr3g096420.1 | PPR containing plant-like protein | HC |
           chr3:44072693-44069577 | 20130731
          Length = 705

 Score =  431 bits (1109), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/659 (36%), Positives = 362/659 (54%), Gaps = 75/659 (11%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD--------------GIFCK--- 209
           +HA + K    ++ F+   L+D Y  CG ++ AR+VFD              G   K   
Sbjct: 41  VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA 100

Query: 210 --------------DMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
                         D  SW  MV  +A+   +EE+L+    M    +  N Y+  +AL +
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA 160

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
           C GL    +G  +HG   K+ Y  D+Y+G+ L+++Y+K   +  AQ  F++M  ++++ W
Sbjct: 161 CAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSW 220

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           + +I  Y Q+  + +ALE+F  M    + P+  T ASV  ACA+   +  G QIH+ V+K
Sbjct: 221 NSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMK 280

Query: 376 VGLDSNVFV-SNALMDVYAKCGEIENSMILFMESP------------------------- 409
                N  V  NAL+D+YAKC  +  + ++F   P                         
Sbjct: 281 HDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARL 340

Query: 410 ------EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
                 E+N V+WN +I GY Q G+ E+A+ LF  +    + PT  TF ++L ACA  A 
Sbjct: 341 MFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLAD 400

Query: 464 LDPGLQVHSLTIKTRY------NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSW 517
           L  G Q H+  +K  +      ++DI V N+LIDMY KCG + D RL F++M +R+ VSW
Sbjct: 401 LKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSW 460

Query: 518 NAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
           NAMI GY+ +G  TEAL +F +M  +  +P+ +T +GVLSACS+AGL+++G+  F+SM+ 
Sbjct: 461 NAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTI 520

Query: 578 DYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGR 637
           ++ + P  +HYTCMV LLGR G  DEA  LI  +P +P  +VW +LL AC V  NI LG+
Sbjct: 521 EHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGK 580

Query: 638 FCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVV 697
           + A+ +LE+ P + G +VLLSNMYA   RW +V  VRK M++ GV K+PG SW+  Q  +
Sbjct: 581 YVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHL 640

Query: 698 HYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVE--DDEKERHLWVHSE 754
           H F V D  HP  K I  +L+ L ++ +  GYVP+ +    D E  ++E +  L +HSE
Sbjct: 641 HVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEAD----DDEPYEEESDSELILHSE 695



 Score =  147 bits (372), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 216/498 (43%), Gaps = 72/498 (14%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           L+ +S+ + L         + G Q+H  I K    LD++  + L++ Y +   +  A + 
Sbjct: 149 LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRA 208

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD+M + N +S+ +L     ++     AL V +R+   G E +     ++     S+   
Sbjct: 209 FDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAI 268

Query: 162 HVCWTIHACVYKRG-HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD---------- 210
                IHA V K   ++ D  +G +L+D Y+ C  V+ AR VFD +  +D          
Sbjct: 269 REGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSG 328

Query: 211 ---------------------MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTI 249
                                +VSW  ++  Y +N   EE+++LF  ++     P +YT 
Sbjct: 329 YAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTF 388

Query: 250 TAALKSCLGLEAFGVGKSV------HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
              L +C  L    +G+        HG   K+  D D++VG  L+++Y K G + D +L 
Sbjct: 389 GNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLV 448

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           FE M ++D + W+ MI  YAQ+    EALE+F  M  S   P++ T   VL AC+     
Sbjct: 449 FERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACS----- 503

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
                 H+ +++ G              Y +   IE+ ++     P ++  T    ++G 
Sbjct: 504 ------HAGLVEEG------------RCYFQSMTIEHGLV-----PVKDHYTCMVDLLG- 539

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            + G  ++A NL  +M    M+P  V + S+L AC     +  G  V    ++    N  
Sbjct: 540 -RAGCLDEANNLIQTM---PMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSG 595

Query: 484 AVANALIDMYAKCGRIND 501
                L +MYA+ GR  D
Sbjct: 596 PYV-LLSNMYAELGRWKD 612


>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
           | 20130731
          Length = 596

 Score =  431 bits (1108), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/537 (40%), Positives = 322/537 (59%), Gaps = 4/537 (0%)

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+  Y+K+     +   F + P K    WS +I+ +AQ+D    +L  F  M +  V P+
Sbjct: 61  LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
           +  F S  ++C     L + K +H   LK     ++FV ++++D+YAKCG+I  +  +F 
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQP--TEVTFSSVLRACAGFAAL 464
           E P +N V+W+ +I GYVQLG+ ++++ LF   +  +      + T SSVLR C G   L
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLL 240

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
             G  +H L+ KT +++   VA++LI +Y+KCG + +A   F+++  R    WNAM+   
Sbjct: 241 QMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIAC 300

Query: 525 SMHGLSTEALNLFNKMQQTN-CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           + H  + +   LF+KM+     K N +TF+ VL ACS+AGL++KG+  F+ M +DY IEP
Sbjct: 301 AQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELM-KDYGIEP 359

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
             +HY+ MV LLGR GK ++AVKLI E+P +P+  VW ALL  C +  N  L  + A  V
Sbjct: 360 GTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRV 419

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVG 703
            E+     G HV+LSN YA A RW+  A  RK M+ +G+KKE GLSWVE    +H F+ G
Sbjct: 420 SELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAG 479

Query: 704 DTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLL 763
           D SH  +  I   L+ L ++   AGYV D + VL +V+ +EK R +  HSERLA+AFG +
Sbjct: 480 DRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFI 539

Query: 764 RIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
             P    IR++KNLR+C DCHT IK IS+   R I+VRD NRFH F+ G C+CGDYW
Sbjct: 540 TFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596



 Score =  191 bits (486), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 193/386 (50%), Gaps = 5/386 (1%)

Query: 147 VCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGI 206
           +C T++ L  S  LP     +HA + K G Q    +   LI+ YS      ++ Q+F   
Sbjct: 23  LCNTLLSLTFSRSLPK-GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDS 81

Query: 207 FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGK 266
             K   +W+ ++  +A+N     SL  F  M   G  P+++   +A KSC  L +  V K
Sbjct: 82  PHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAK 141

Query: 267 SVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSD 326
            +H  ALK  Y  D++VG+ ++++YAK GDI  A   F+EMP ++V+ WS +I  Y Q  
Sbjct: 142 MLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLG 201

Query: 327 RSKEALELFH--CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFV 384
              E+L LF    + + +   N+FT +SVL+ C    LL +G+ IH    K   DS+ FV
Sbjct: 202 EDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFV 261

Query: 385 SNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-ND 443
           +++L+ +Y+KCG +E +  +F E   +N   WN M++   Q    +K   LF  M     
Sbjct: 262 ASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGG 321

Query: 444 MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDAR 503
           M+   +TF  VL AC+    ++ G     L             + ++D+  + G++NDA 
Sbjct: 322 MKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAV 381

Query: 504 LTFDKMD-KREEVSWNAMICGYSMHG 528
              ++M  +  E  W A++ G  +HG
Sbjct: 382 KLIEEMPMEPTESVWGALLTGCRLHG 407



 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 191/389 (49%), Gaps = 7/389 (1%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDD 97
           Q PL  +    LL        P  G QLH  I+K G   + L +H+ L+NFY +      
Sbjct: 16  QQPLYRNLCNTLLSLTFSRSLPK-GLQLHAHIIKLGLQTIPLLSHH-LINFYSKTHLPYS 73

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
           + ++F + P  +  ++ ++    +++     +L+    + ++G   +  +  +  K    
Sbjct: 74  SLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGI 133

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
           +    V   +H    K  +  D FVG+S+ID Y+ CG++  A  VFD +  +++VSW+G+
Sbjct: 134 LSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGL 193

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRP--NNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
           +  Y +    +ESL+LF +  V       N++T+++ L+ C G     +G+ +HG + K 
Sbjct: 194 IYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKT 253

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
            +D   +V + L+ LY+K G + +A   FEE+  +++  W+ M+   AQ   + +  ELF
Sbjct: 254 SFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELF 313

Query: 336 HCMRQSSVVPNNF-TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAK 394
             M+    +  NF TF  VL AC+   L+  GK     +   G++      + ++D+  +
Sbjct: 314 DKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGR 373

Query: 395 CGEIENSMILFMESP-EQNEVTWNTMIVG 422
            G++ +++ L  E P E  E  W  ++ G
Sbjct: 374 AGKLNDAVKLIEEMPMEPTESVWGALLTG 402


>Medtr8g105210.1 | PPR containing plant-like protein | HC |
           chr8:44370221-44373841 | 20130731
          Length = 959

 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/668 (35%), Positives = 375/668 (56%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K +H      G  +DLF  + L+  Y     + DA  LFDE+P+ + I +  +  G  ++
Sbjct: 197 KMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKN 256

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
             F+ AL     +     + N      ++ +  +  +      +H  V + G ++D  V 
Sbjct: 257 GDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVA 316

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            ++I  YS CGN+  AR++FD +   D V+W G++  Y +N F +E++ LF  M   G +
Sbjct: 317 NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVK 376

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
            ++ T  + L S L   +    K VH   ++     D+Y+ + L+++Y K GD+  A   
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKT 436

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F++    DV   + MI+ Y  +  + EAL LF  + Q  +VPN  T ASVL ACAA   L
Sbjct: 437 FQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASL 496

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
            LGK++H ++LK GL++   V +++  +YAK G ++ +   F   P ++ V WN MIV +
Sbjct: 497 KLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSF 556

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            Q G  E A++LF  M  +  +   V+ S+ L ACA + AL  G ++H   ++  + +D 
Sbjct: 557 SQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDT 616

Query: 484 AVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT 543
            VA+ LIDMY+KCG++  AR  FD MD + EVSWN++I  Y  HG   E L+LF++M + 
Sbjct: 617 FVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA 676

Query: 544 NCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDE 603
             +P+ +TF+ ++SAC +AGL+D+G   F+ M+++Y I   +EH+ CMV L GR G+  E
Sbjct: 677 GIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHE 736

Query: 604 AVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAV 663
           A   I  +PF P    W +LLGAC +  N++L +  ++H++E+ P++ G +VLLSN++A 
Sbjct: 737 AFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAG 796

Query: 664 AKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKK 723
           A  W++V  VR  MK KGV+K PG SW++  G  H FS  D  HP +  I  +L+ L  +
Sbjct: 797 AGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLE 856

Query: 724 TRDAGYVP 731
            R  GYVP
Sbjct: 857 LRKHGYVP 864



 Score =  247 bits (631), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 264/527 (50%), Gaps = 8/527 (1%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           +S A+L++Q +        +Q+H  +L  G    L   + +L  YV      D   LF  
Sbjct: 85  NSDASLVKQQV--------RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCR 136

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
           + L  ++ +  L +G S    FD AL    R+       + +    +IK    ++   +C
Sbjct: 137 LQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLC 196

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
             +H      G   D F+G+SLI  Y+  G +  A+ +FD +  +D + W  M+  Y +N
Sbjct: 197 KMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKN 256

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
             +  +L  F +MR    +PN+ +    L  C        G  +HG  +++ ++ D  V 
Sbjct: 257 GDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVA 316

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
             ++ +Y+K G++ DA+  F+ MP+ D + W+ +IA Y Q+  + EA+ LF  M  S V 
Sbjct: 317 NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVK 376

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
            ++ TFAS L +      L   K++HS +++ G+  +V++ +AL+D+Y K G++E +   
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKT 436

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F ++   +      MI GYV  G   +A+NLF  +I   M P  +T +SVL ACA  A+L
Sbjct: 437 FQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASL 496

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
             G ++H   +K    N   V +++  MYAK GR++ A   F +M  ++ V WN MI  +
Sbjct: 497 KLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSF 556

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           S +G    A++LF +M  +  K + ++    LSAC+N   L  G+ L
Sbjct: 557 SQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603



 Score =  213 bits (543), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 243/488 (49%), Gaps = 2/488 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           +S S+  LL          AG QLH  +++ G   D    N ++  Y +   L DA K+F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           D MP T+T+++  L  G  ++   D A+ +   +   G +++     + +  ++      
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
            C  +H+ + + G   D ++ ++L+D Y   G+V+ A + F      D+   T M+  Y 
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
            N    E+L LF  +   G  PN  T+ + L +C  L +  +GK +H   LK   +    
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           VG+ +  +YAKSG +  A  FF  MP KD + W+LMI  ++Q+ + + A++LF  M  S 
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
              ++ + ++ L ACA    L  GK++H  V++    S+ FV++ L+D+Y+KCG++  + 
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALAR 636

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            +F     +NEV+WN++I  Y   G   + ++LF  M+   +QP  VTF  ++ AC    
Sbjct: 637 SVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAG 696

Query: 463 ALDPGL-QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEV-SWNAM 520
            +D G+     +T +      +     ++D+Y + GR+++A  T   M    +  +W ++
Sbjct: 697 LVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSL 756

Query: 521 ICGYSMHG 528
           +    +HG
Sbjct: 757 LGACRLHG 764



 Score =  140 bits (352), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 193/417 (46%), Gaps = 33/417 (7%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LDS ++A+ L   +++      K++H  I++ G P D++  + L++ Y +   ++ A K 
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKT 436

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           F +  L +      +  G   +     AL++   L +EG   N     +++    ++   
Sbjct: 437 FQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASL 496

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +   +H  + K+G +    VG+S+   Y+  G +D A Q F  +  KD V W  M+  +
Sbjct: 497 KLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSF 556

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           ++N   E ++ LF QM   G + ++ +++A L +C    A   GK +H   ++  +  D 
Sbjct: 557 SQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDT 616

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           +V + L+++Y+K G +  A+  F+ M  K+ + W+ +IA Y    R +E L+LFH M ++
Sbjct: 617 FVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA 676

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            + P++ TF  ++ AC            H+ +    +D  ++    + + Y  C  +E+ 
Sbjct: 677 GIQPDHVTFLVIMSACG-----------HAGL----VDEGIYYFRCMTEEYGICARMEH- 720

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC 458
                         +  M+  Y + G   +A +   SM      P   T+ S+L AC
Sbjct: 721 --------------FACMVDLYGRAGRLHEAFDTIKSM---PFTPDAGTWGSLLGAC 760


>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:10160876-10157214 | 20130731
          Length = 967

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/817 (29%), Positives = 415/817 (50%), Gaps = 69/817 (8%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
            DS ++  +L+  +  R    G ++H  ++K+G  +D+     L+NFY +   +D A+++
Sbjct: 152 FDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQV 211

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           F E P      + T+     RS ++ +AL +   + ++  +        +++    +   
Sbjct: 212 FHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKAL 271

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD----------------- 204
           +    +H    + G  ++  V  S+I  YS       AR VFD                 
Sbjct: 272 NEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIF 331

Query: 205 -----------------GIFCK----DMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
                            G+ C     D+++W  ++  Y     +E  L  F  +  +G++
Sbjct: 332 SYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFK 391

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P++ ++T+AL++ + L  F +GK +HG  +++  + D+YV T L+++Y K+  +  AQ  
Sbjct: 392 PDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAV 451

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
                 K+V  W+ +I+ Y+   +  EA++L + M +  + P+  T+  ++   + Q  +
Sbjct: 452 LHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRI 511

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
                I + +   G+  NV                               V+W  +I G 
Sbjct: 512 DEALTIINRIKSSGITPNV-------------------------------VSWTALISGC 540

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            Q      A+ +FS M   +++P   T  S+L ACAG + L  G ++H  ++K  + +DI
Sbjct: 541 SQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDI 600

Query: 484 AVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT 543
            VA ALIDMY++ G++  A   F+K+ ++    WN M+ GY++H    E + L++KM++ 
Sbjct: 601 YVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRER 660

Query: 544 NCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDE 603
           + +P+ +TF  +LSAC N+GL+D+G   F SM +DYNI P IEHY CMV LLG+ G  DE
Sbjct: 661 HIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDE 720

Query: 604 AVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAV 663
           A   I  +P +P   +W ALL +C + KNI L    A+ + +M+P++   +VL+ N+Y+ 
Sbjct: 721 ASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSS 780

Query: 664 AKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKK 723
             RW  V  ++ +M    +K  P  SW +    +H FS     HP+   I   L  L  +
Sbjct: 781 LNRWVAVERLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISE 840

Query: 724 TRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDC 783
            R  GY PD N V  +++D+EKE+ L  H+E+LA+ +G++++     IRI+KN RIC DC
Sbjct: 841 IRKLGYAPDLNCVCQNIDDNEKEKILMSHTEKLAMVYGVMKMKGGSPIRIVKNTRICFDC 900

Query: 784 HTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           HTV K IS V +REI++RD  RFHHF++G C+C D W
Sbjct: 901 HTVAKYISLVRKREILLRDGGRFHHFKNGKCACNDRW 937



 Score =  170 bits (431), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 226/506 (44%), Gaps = 48/506 (9%)

Query: 167 IHACVYKRGHQAD-AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG---CYA 222
           +HA + K     + A +  +++  Y   G+  +A ++F   F ++ + W   +     + 
Sbjct: 73  LHAQIIKTPKNYNFATIDGTMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESFG 132

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
            + F  E L +F +M   G   ++   T  LK CL L  F  G  VH C +K  +  D++
Sbjct: 133 GDPF--EILVVFNEMYSKGVEFDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDVH 190

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           +   L+  Y K   I  A   F E P K+   W+ ++    +S+R K ALELF  M++ S
Sbjct: 191 LSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDS 250

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
                 T   +LQAC     L  GKQ+H   L+ GL SN  V N+++ +Y++    + + 
Sbjct: 251 AKATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLAR 310

Query: 403 ILF--MESPEQNE------------------------------------VTWNTMIVGYV 424
            +F  ME   +N                                     +TWN+++ GY+
Sbjct: 311 AVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYL 370

Query: 425 QLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
             G  E  +  F S+     +P   + +S L+A         G ++H   +++  N D+ 
Sbjct: 371 LRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVY 430

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
           V  +L+DMY K   +  A+    +   +   +WN++I GYS  G   EA+ L N+M +  
Sbjct: 431 VCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEG 490

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
             P+ +T+ G++S  S  G +D+  ++   +     I P +  +T ++    +  K+ +A
Sbjct: 491 ITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSS-GITPNVVSWTALISGCSQNEKYMDA 549

Query: 605 VKLIGEIP---FQPSVMVWRALLGAC 627
           +K+  ++     +P+     +LL AC
Sbjct: 550 LKIFSQMQAENVKPNSTTICSLLCAC 575


>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:8840204-8842727 | 20130731
          Length = 623

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/597 (37%), Positives = 359/597 (60%), Gaps = 8/597 (1%)

Query: 228 EESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTEL 287
           + SLQ F  +    + P   T+   LKS     +  + + +H   +K+   +D ++G +L
Sbjct: 31  QTSLQ-FNAISTHHFDPFLSTLILHLKSS---SSVSICRIIHAHVIKSLDYRDGFIGDQL 86

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP-N 346
           +  Y K G   DA L F+EMPKKD + W+ +++  A+  +  E L +F  M+  S +  N
Sbjct: 87  VSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLN 146

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
            FTF SV+ AC ++     G  +H   +K+GL   V V NAL+++Y K G +E++  LF 
Sbjct: 147 EFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFS 206

Query: 407 ESPEQNE--VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           E PE  +  V+WN+++    Q G   +A N F  M  N   P + T  S+L+AC  F   
Sbjct: 207 EMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLG 266

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
                +H +      + ++ +   L+++Y+K GR+N++R  F+++ K ++V+W AM+ GY
Sbjct: 267 RMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGY 326

Query: 525 SMHGLSTEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           +MHG   EA+  F ++ ++   +P+ +TF  +LSACS++GL+ +G+  F+ MS  Y ++P
Sbjct: 327 AMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQP 386

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
            ++HY+CMV LLGR G  D+A +LI  +PF+P+  VW ALLGAC V +NIDLG+  A+++
Sbjct: 387 RLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNL 446

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVG 703
           + + P D   +++LSNMY+ A  W++ + VR  MK K + +  G S++E+   +H F V 
Sbjct: 447 IALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVD 506

Query: 704 DTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLL 763
           D +HPD+  I   LE + KK +D G+V +  ++L DV+++ K   +  HSE++ALA+GLL
Sbjct: 507 DYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHDVDEEVKIDMITKHSEKIALAYGLL 566

Query: 764 RIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
              +   + I+KNLRIC DCH  +K +S V +R I++RD  RFH F  G+CSCGDYW
Sbjct: 567 VTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623



 Score =  176 bits (445), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 193/395 (48%), Gaps = 11/395 (2%)

Query: 141 HEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAAR 200
           H  +PF+ T I+ L  S  +  +C  IHA V K     D F+G  L+  Y   G    A 
Sbjct: 42  HHFDPFLSTLILHLKSSSSVS-ICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAY 100

Query: 201 QVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGL 259
            +FD +  KD VSW  +V   A+     E L +FC+M+     + N +T  + + +C+  
Sbjct: 101 LLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSE 160

Query: 260 EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP--KKDVIPWSL 317
           +A   G  VH CA+K     ++ V   L+ +Y K G +  A   F EMP  +K ++ W+ 
Sbjct: 161 KACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNS 220

Query: 318 MIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG 377
           ++A  AQ+    EA   F  MR +   P++ T  S+LQAC    L  + + +H  +   G
Sbjct: 221 IVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCG 280

Query: 378 LDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFS 437
           LD N+ +   L+++Y+K G + NS  +F E  + ++V W  M+ GY   G G++A+  F 
Sbjct: 281 LDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFE 340

Query: 438 SMIGND-MQPTEVTFSSVLRACAGFAALDPG---LQVHSLTIKTRYNNDIAVANALIDMY 493
            ++  + M+P  VTF+ +L AC+    +  G    +V S   K +   D    + ++D+ 
Sbjct: 341 RIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLD--HYSCMVDLL 398

Query: 494 AKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
            +CG ++DA      M        W A++    +H
Sbjct: 399 GRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVH 433



 Score =  147 bits (371), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 187/366 (51%), Gaps = 16/366 (4%)

Query: 66  LHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQ 125
           +H  ++K     D F  + L++ Y++     DA  LFDEMP  + +S+ +L  G ++  Q
Sbjct: 67  IHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQ 126

Query: 126 FDHALHVILRLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
               L V  ++  +   ++N F   ++I   VS       + +H C  K G   +  V  
Sbjct: 127 LGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVN 186

Query: 185 SLIDAYSVCGNVDAARQVFDGI--FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
           +L++ Y   G V++A ++F  +    K +VSW  +V   A+N    E+   F  MRV G+
Sbjct: 187 ALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGF 246

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSV---HGCALKACYDQDLYVGTELLELYAKSGDIVD 299
            P++ T+ + L++C   E F +G+ V   HG       D++L + T LL LY+K G + +
Sbjct: 247 FPDDATMVSLLQAC---ENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNN 303

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH-CMRQSSVVPNNFTFASVLQACA 358
           ++  FEE+ K D + W+ M+A YA     KEA+E F   +R+  + P++ TF  +L AC+
Sbjct: 304 SRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACS 363

Query: 359 AQVLLILGK---QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEV 414
              L+  GK   ++ S+V KV    + +  + ++D+  +CG ++++  L    P E N  
Sbjct: 364 HSGLVKEGKYFFRVMSDVYKVQPRLDHY--SCMVDLLGRCGLLDDAHELIKNMPFEPNSG 421

Query: 415 TWNTMI 420
            W  ++
Sbjct: 422 VWGALL 427



 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 151/343 (44%), Gaps = 50/343 (14%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           L+  ++ +++   +  +  + G  +HC  +K G   ++   N L+N Y +F  ++ A +L
Sbjct: 145 LNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRL 204

Query: 102 FDEMPLT--NTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           F EMP +  + +S+ ++   C+++   + A +    +   G   +     ++++   +  
Sbjct: 205 FSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFP 264

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
           L  +   +H  ++  G   +  + T+L++ YS  G ++ +R+VF+ I   D V+WT M+ 
Sbjct: 265 LGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLA 324

Query: 220 CYAENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
            YA +   +E+++ F ++ R  G  P++ T T  L +C                      
Sbjct: 325 GYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSAC---------------------- 362

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEM-------PKKDVIPWSLMIARYAQSDRSKEA 331
                        + SG + + + FF  M       P+ D   +S M+    +     +A
Sbjct: 363 -------------SHSGLVKEGKYFFRVMSDVYKVQPRLD--HYSCMVDLLGRCGLLDDA 407

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
            EL   ++     PN+  + ++L AC     + LGK+   N++
Sbjct: 408 HEL---IKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLI 447


>Medtr1g014340.1 | PPR containing plant-like protein | HC |
           chr1:3000992-3003085 | 20130731
          Length = 697

 Score =  427 bits (1098), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/703 (34%), Positives = 385/703 (54%), Gaps = 10/703 (1%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +D+     LL+ ++ ++    GK LH  ++  G   D++    L++ YV  +  D A  +
Sbjct: 1   MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60

Query: 102 FDEMPLTNTISFVT-LAQGCSRSHQFDHALHVILRLF-KEGHEVNPFVCTTIIKLLVSMD 159
           FD +     IS    L  G +R+  +D AL +  +L      + + +   +++K    + 
Sbjct: 61  FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
              +   IH C+ K G   D  VG+SL+  Y+ C   + A ++FD +  KD+  W  ++ 
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           CY ++  +EE+L+ F  MR  G+ P++ TIT A+ SC  L     G+ +H   + + +  
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           D +V   L+++Y K G +  A   FE+MP K V+ W+ MI  Y         ++LF  M 
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY 300

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
              V P   T  S L AC+    L+ GK +H  +++  +  ++F++++LMD+Y KCG++E
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVE 360

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           ++  +F   P+   V+WN MI GYV  G    A+ LF  M  + ++P  +TF+SVL AC+
Sbjct: 361 SAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACS 420

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
             AAL+ G ++H+L ++    N+  V  AL+DMYAKCG + +A   F  + +R+ VSW +
Sbjct: 421 QLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTS 480

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           MI  Y  HG   EAL LF +M Q+N KP+++TF+ +LSACS+AGL+D G   F  M   Y
Sbjct: 481 MITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVY 540

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP-FQPSVMVWRALLGACVVQKNIDLGRF 638
            I P IEHY+C++ LLGR G+  EA +++   P       +   L  AC + KN+DLG  
Sbjct: 541 GIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVE 600

Query: 639 CAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE-NQGVV 697
            A+++++  P D  T+++LSNMYA   +WD V  VR  MK  G+KK PG SW+E N+ +V
Sbjct: 601 IAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIV 660

Query: 698 HYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 740
            +F V D SH   + I  +L +L     D     +C  + + V
Sbjct: 661 PFF-VEDNSHYHLEGIGNILSYLTSHMED-----ECKPIYMSV 697


>Medtr1g014340.2 | PPR containing plant-like protein | HC |
           chr1:3000992-3003085 | 20130731
          Length = 697

 Score =  427 bits (1098), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/703 (34%), Positives = 385/703 (54%), Gaps = 10/703 (1%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +D+     LL+ ++ ++    GK LH  ++  G   D++    L++ YV  +  D A  +
Sbjct: 1   MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60

Query: 102 FDEMPLTNTISFVT-LAQGCSRSHQFDHALHVILRLF-KEGHEVNPFVCTTIIKLLVSMD 159
           FD +     IS    L  G +R+  +D AL +  +L      + + +   +++K    + 
Sbjct: 61  FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
              +   IH C+ K G   D  VG+SL+  Y+ C   + A ++FD +  KD+  W  ++ 
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           CY ++  +EE+L+ F  MR  G+ P++ TIT A+ SC  L     G+ +H   + + +  
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           D +V   L+++Y K G +  A   FE+MP K V+ W+ MI  Y         ++LF  M 
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY 300

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
              V P   T  S L AC+    L+ GK +H  +++  +  ++F++++LMD+Y KCG++E
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVE 360

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           ++  +F   P+   V+WN MI GYV  G    A+ LF  M  + ++P  +TF+SVL AC+
Sbjct: 361 SAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACS 420

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
             AAL+ G ++H+L ++    N+  V  AL+DMYAKCG + +A   F  + +R+ VSW +
Sbjct: 421 QLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTS 480

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           MI  Y  HG   EAL LF +M Q+N KP+++TF+ +LSACS+AGL+D G   F  M   Y
Sbjct: 481 MITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVY 540

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP-FQPSVMVWRALLGACVVQKNIDLGRF 638
            I P IEHY+C++ LLGR G+  EA +++   P       +   L  AC + KN+DLG  
Sbjct: 541 GIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVE 600

Query: 639 CAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE-NQGVV 697
            A+++++  P D  T+++LSNMYA   +WD V  VR  MK  G+KK PG SW+E N+ +V
Sbjct: 601 IAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIV 660

Query: 698 HYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 740
            +F V D SH   + I  +L +L     D     +C  + + V
Sbjct: 661 PFF-VEDNSHYHLEGIGNILSYLTSHMED-----ECKPIYMSV 697


>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:38114703-38117150 | 20130731
          Length = 616

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/606 (38%), Positives = 346/606 (57%), Gaps = 37/606 (6%)

Query: 252 ALKS---CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP 308
           ALKS    LG +   + K +H   +K+  +        L++ Y K G + DA   F+ +P
Sbjct: 11  ALKSQLFSLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALP 70

Query: 309 KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA--AQVLLILG 366
           ++D + W+ +++    S+   +A  +   +    + P++F F+S+++ACA    V + LG
Sbjct: 71  QQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLG 130

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAK-------------------------------C 395
           KQ+H+  L      +  V ++L+D+YAK                                
Sbjct: 131 KQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARS 190

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTE-VTFSSV 454
           G    ++ LF ESP +N   W  +I G VQ G+   A+ LF  M    +   + +  SSV
Sbjct: 191 GRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSV 250

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           + ACA  A  + G QVH + I   Y + + ++NAL+DMYAKC  +  A+  F +M +++ 
Sbjct: 251 VGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDV 310

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           VSW ++I G + HGL+ EAL L++ M     KPN++TFVG++ ACS+ GL+ KG++LFKS
Sbjct: 311 VSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKS 370

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
           M +D+ I P ++HYTC++ L  R G  DEA  LI  +P +P    W ALL AC    N  
Sbjct: 371 MVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTK 430

Query: 635 LGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
           +    A H+L++KP D  +++LLSN+YA A  W+NV+ VRK M  K VKK PG S V+  
Sbjct: 431 MAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLG 490

Query: 695 GVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSE 754
                F  G+ S P    I  ++  L+ + R  GYVPD ++VLLD++  EKER L+ HSE
Sbjct: 491 REFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSE 550

Query: 755 RLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVC 814
           RLALA+GLL+     +IRI+KNLR+C DCHTV+KLIS +  REI VRD+ R+HHF+ G C
Sbjct: 551 RLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKC 610

Query: 815 SCGDYW 820
           SC D+W
Sbjct: 611 SCNDFW 616



 Score =  148 bits (373), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 204/431 (47%), Gaps = 38/431 (8%)

Query: 54  AIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISF 113
           ++  ++P   K+LH  I+K G          L++ Y +   L DA KLFD +P  + +++
Sbjct: 18  SLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAW 77

Query: 114 VTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW--TIHACV 171
            T+   C+ S+    A  + L +  EG + + FV +++IK   ++   HV     +HA  
Sbjct: 78  ATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARF 137

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN------- 224
                  D  V +SL+D Y+     D  R VFD IF    +SWT M+  YA +       
Sbjct: 138 LLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEAL 197

Query: 225 -CFYE-----------------------ESLQLFCQMRVMGYR-PNNYTITAALKSCLGL 259
             F E                       ++L LF +MR  G    +   +++ + +C   
Sbjct: 198 ELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANS 257

Query: 260 EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMI 319
               +GK VH   +   Y+  L++   L+++YAK  D+V A+  F EM +KDV+ W+ +I
Sbjct: 258 AVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSII 317

Query: 320 ARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGL 378
              AQ   ++EAL L+  M  + V PN  TF  ++ AC+   L+  G+ +  ++++  G+
Sbjct: 318 VGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGI 377

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVGYVQLGDGEKAMNLFS 437
             ++     L+D++++ G ++ +  L    P + +E TW  ++      G+ + A+ +  
Sbjct: 378 RPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIAD 437

Query: 438 SMIGNDMQPTE 448
            ++  D++P +
Sbjct: 438 HLL--DLKPED 446


>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr1:15006779-15004629 | 20130731
          Length = 675

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/702 (35%), Positives = 386/702 (54%), Gaps = 85/702 (12%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF----DGIFCKDMVSWTGMVGCYAENCF 226
           VY+R    D     +++  YS  G  + A  +F    + I   D+V+W+ ++  YA+  F
Sbjct: 7   VYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYAQRGF 66

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY-------DQ 279
             E++ +F +M     RPN   + + L +C  + A   GK  H  ++K          + 
Sbjct: 67  GCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDND 126

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEM-PK-KDVIPWSLMIARYAQSDRSKEALELFHC 337
           DL V   L+++YAK   +  A+  F+E+ PK +DV+ W++MI  YAQ   +  AL+LF  
Sbjct: 127 DLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSE 186

Query: 338 MRQ--SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL--DSNVFVSNALMDVYA 393
           M +  + +VPN+FT + VL +CA    LI GK IH+ VL+  L     +FV+N L+D+Y+
Sbjct: 187 MFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYS 246

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGY------------------------------ 423
           K G+++ + ++F    ++N ++W +++ GY                              
Sbjct: 247 KSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWN 306

Query: 424 -VQLGDGEKAMNLFSSM--IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
               GD   A+ LFS M  I N + P + T S VL +CA  +AL  G Q+H+  ++  ++
Sbjct: 307 RFVXGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHS 366

Query: 481 ND--IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
           N   + VAN LIDMY+K G ++ A++ FD M KR  VSW +++ GY MHG S +A  +F+
Sbjct: 367 NSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFD 426

Query: 539 KMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRL 598
           +M++     + +TF+ VL AC                          +HY CMV LLGR 
Sbjct: 427 EMRKEALVLDGITFLVVLYAC--------------------------KHYACMVDLLGRA 460

Query: 599 GKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLS 658
           G+  EA++LI ++P +P+ +VW ALL AC +  N +L  F A+ +LE+K  +DGT+ LLS
Sbjct: 461 GRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLS 520

Query: 659 NMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLE 718
           N+YA A+RW +VA +   MKR G+KK PG SWV+ +  +  F VGD +H  ++ I   L 
Sbjct: 521 NIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLA 580

Query: 719 WLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLR 778
            L K+ +        N  L DV+D+EK   L  HSE+LALA+ +L +P    IRI KNLR
Sbjct: 581 DLIKRIK-------ANFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLR 633

Query: 779 ICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           IC D H+ I  IS +V+ EI++RD +RFH F++G CSC  YW
Sbjct: 634 ICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 675



 Score =  164 bits (414), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 48/292 (16%)

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ----------SSVV---- 344
           DA   +E M  KDV+ W+ M+  Y+Q+ R ++AL LF  MR+          SSV+    
Sbjct: 3   DASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYA 62

Query: 345 ---------------------PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL----- 378
                                PN     S+L ACA+   L+ GK+ H   +K  L     
Sbjct: 63  QRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHN 122

Query: 379 --DSNVFVSNALMDVYAKCGEIENSMILFME--SPEQNEVTWNTMIVGYVQLGDGEKAMN 434
             + ++ V NAL+D+YAKC  +E +  +F E    +++ VTW  MI GY Q GD   A+ 
Sbjct: 123 DDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQ 182

Query: 435 LFSSMIGND--MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR--YNNDIAVANALI 490
           LFS M   D  + P + T S VL +CA  +AL  G  +H+  ++    Y++ + VAN LI
Sbjct: 183 LFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLI 242

Query: 491 DMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
           DMY+K G ++ A++ FD M KR  +SW +++ GY MHG S +A  +F++M++
Sbjct: 243 DMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRK 294



 Score =  109 bits (273), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 143/318 (44%), Gaps = 68/318 (21%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           D+    +++  Y Q+   + A +LF EM                   +FD+ +       
Sbjct: 160 DVVTWTVMIGGYAQYGDANHALQLFSEM------------------FKFDNCI------- 194

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRG--HQADAFVGTSLIDAYSVCGN 195
                 N F  + ++     +        IHA V +R   +    FV   LID YS  G+
Sbjct: 195 ----VPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGD 250

Query: 196 VDAARQVFDGIFCKDMVSWT------GMVGCYAENCF--YEE------------------ 229
           VD A+ VFD +  ++ +SWT      GM GC +E+ F  ++E                  
Sbjct: 251 VDTAQVVFDSMSKRNAISWTSLLTGYGMHGC-SEDAFRVFDEMRKEALSFGNGGSWNRFV 309

Query: 230 ------SLQLFCQMRVMG--YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD- 280
                 +LQLF +M  +     PN++TI+  L SC  L A   GK +H   L+  +    
Sbjct: 310 XGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHSNSD 369

Query: 281 -LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
            L+V   L+++Y+KSGD+  AQ+ F+ M K++ + W+ ++  Y    RS++A  +F  MR
Sbjct: 370 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMR 429

Query: 340 QSSVVPNNFTFASVLQAC 357
           + ++V +  TF  VL AC
Sbjct: 430 KEALVLDGITFLVVLYAC 447



 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 46/77 (59%)

Query: 499 INDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSA 558
           + DA   +++M  ++ V+WNAM+ GYS +G   +AL+LF KM++   + + +T+  V+S 
Sbjct: 1   MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISG 60

Query: 559 CSNAGLLDKGQSLFKSM 575
            +  G   +   +F+ M
Sbjct: 61  YAQRGFGCEAMDVFRKM 77


>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:39629093-39627012 | 20130731
          Length = 626

 Score =  423 bits (1087), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/588 (38%), Positives = 329/588 (55%), Gaps = 39/588 (6%)

Query: 268 VHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDR 327
           +H   ++   D    +  +L   Y+  G +  +   F     +DV  W+ +I  + QS  
Sbjct: 43  IHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKL 102

Query: 328 SKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNA 387
           + +AL  +  M    + PN FTF+S+L     Q +    K IH +V+K GL S+ +V+  
Sbjct: 103 NDQALSYYAQMLTHRIQPNAFTFSSLLNGSTIQPI----KSIHCHVIKFGLCSDTYVATG 158

Query: 388 LMDVYAKCGEIENSMILFMESPEQ--------------------------------NEVT 415
           L+D YA+ G+  ++  LF + PE+                                + V 
Sbjct: 159 LVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVV 218

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           WN MI GY Q G   + + LF  M+   ++P  +T   VL +C    AL+ G  VHS   
Sbjct: 219 WNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIK 278

Query: 476 KTR---YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
             +      ++ V  AL+DMY KCG + DAR  FDK+D ++ V+WN+MI GY+++GLS E
Sbjct: 279 NGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEE 338

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           AL LF++M     +P+ +TF+ +L+AC ++GL+ KG  +F  M  +Y +EP +EH+ CMV
Sbjct: 339 ALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHFGCMV 398

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            LLGR G+  EA  L+  +   P  ++W  LL AC +  NI LG   A+ +L       G
Sbjct: 399 NLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLASSG 458

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
           T+VLLSN+YA A  WD  A VR  MK  GV+KEPG S +E    VH F  GD  HP +K 
Sbjct: 459 TYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEVNNRVHEFIAGDLKHPKSKD 518

Query: 713 ICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIR 772
           I  MLE +N   +  GY P  + VL D+ +++KE  L VHSE+LALAFGL+      +++
Sbjct: 519 IYLMLEEMNSWLKGKGYTPKTDVVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTVK 578

Query: 773 ILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           I+KNLR+C+DCH V+K+IS++  R IV+RD NRFHHF +G CSCGD+W
Sbjct: 579 IVKNLRVCLDCHAVMKMISKITGRRIVMRDRNRFHHFDNGSCSCGDFW 626



 Score =  149 bits (377), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 187/400 (46%), Gaps = 45/400 (11%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA + +R       +   L   YS  G+++ +  +F+    +D+ +WT ++  + ++  
Sbjct: 43  IHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKL 102

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
            +++L  + QM     +PN +T ++ L            KS+H   +K     D YV T 
Sbjct: 103 NDQALSYYAQMLTHRIQPNAFTFSSLLNG----STIQPIKSIHCHVIKFGLCSDTYVATG 158

Query: 287 LLELYAKSGDIVDAQLFFEEMPKK--------------------------------DVIP 314
           L++ YA+ GD + A+  F++MP+K                                DV+ 
Sbjct: 159 LVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVV 218

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           W++MI  YAQ+    E L LF  M    V PN  T   VL +C     L  G+ +HS + 
Sbjct: 219 WNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYI- 277

Query: 375 KVGLD----SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGE 430
           K G D      V V  AL+D+Y KCG +E++  +F +   ++ V WN+MI+GY   G  E
Sbjct: 278 KNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSE 337

Query: 431 KAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--A 488
           +A+ LF  M G  ++P+ VTF ++L AC     +  G ++ +L +K  Y  +  V +   
Sbjct: 338 EALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNL-MKNEYKMEPRVEHFGC 396

Query: 489 LIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
           ++++  + GR+ +A      M    + V W  ++    +H
Sbjct: 397 MVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLH 436



 Score = 86.7 bits (213), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 167/407 (41%), Gaps = 102/407 (25%)

Query: 47  YAALLQQAIQNRHPNAG--------------KQLHCDILKRGAPLDLFAHNILLNFYVQF 92
           YA +L   IQ   PNA               K +HC ++K G   D +    L++ Y + 
Sbjct: 110 YAQMLTHRIQ---PNAFTFSSLLNGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARG 166

Query: 93  DCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN-------- 144
                A KLFD+MP  + ISF T+    ++  +   A     RL  +G E N        
Sbjct: 167 GDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEA-----RLLFDGMEGNRDVVVWNV 221

Query: 145 ----------PFVCTTII-KLLVSMDLPHVCW---TIHAC----VYKRGHQADAFVG--- 183
                     P  C  +  ++LV    P+V      + +C      + G    +++    
Sbjct: 222 MIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGK 281

Query: 184 -----------TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQ 232
                      T+L+D Y  CG+++ AR+VFD I  KD+V+W  M+  YA N   EE+L+
Sbjct: 282 DGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALK 341

Query: 233 LFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYA 292
           LF +M   G RP+  T  A L +C        G S  G   K         G E+  L  
Sbjct: 342 LFHEMHGEGVRPSYVTFIALLTAC--------GHS--GLVTK---------GWEMFNLMK 382

Query: 293 KSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFAS 352
                      ++  P+  V  +  M+    ++ R +EA +L   M+   + P+   + +
Sbjct: 383 NE---------YKMEPR--VEHFGCMVNLLGRAGRLQEAYDLVRSMK---IDPDPVIWGT 428

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSN---VFVSNALMDVYAKCG 396
           +L AC     + LG++I   +L   L S+   V +SN    +YA  G
Sbjct: 429 LLWACRLHNNISLGEEIAEFLLSNDLASSGTYVLLSN----IYAAAG 471


>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:41303481-41301142 | 20130731
          Length = 634

 Score =  421 bits (1083), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/646 (35%), Positives = 356/646 (55%), Gaps = 50/646 (7%)

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE-NCFYEESLQLFC 235
            ++      LI +Y   G++D+A +VF  +      +W  ++G +A+ +  +E + QLF 
Sbjct: 37  HSNVIASNQLIASYVRSGDIDSALRVFHNMTVISTTTWNTILGAFAKKHGNFERARQLFD 96

Query: 236 QMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSG 295
           ++      PN  +    L                     ACY                  
Sbjct: 97  KIP----EPNTVSYNTML---------------------ACYLHHF-------------- 117

Query: 296 DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQ 355
            I +A+ FF+ MP +D   W+ M++ YAQ     EA  L   M + + V    T+++++ 
Sbjct: 118 GIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCV----TWSAMVS 173

Query: 356 ACAAQVLLILGKQ-IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
              A   L    +  ++  +K     +V    A++  Y K G +  + +LF +   +  V
Sbjct: 174 GYVACGDLDAAVECFYAAPMK-----SVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLV 228

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           TWN MI GYV  G  E  + LF +M+   ++P  ++ +SVL  C+  +AL  G QVH L 
Sbjct: 229 TWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLV 288

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
            K+  + D     +LI MY+KCG + D+   F ++ +++ V+WNAMI GY+ HG   +AL
Sbjct: 289 CKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKAL 348

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
           +LF++M+++  KP+ +TFV VL AC++AG++D G   F SM +++ I+   EHY CMV L
Sbjct: 349 HLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDL 408

Query: 595 LGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTH 654
           LGR G+  EAV ++  +PF+P   ++  LLGAC + K++ +  F A+++LE+ P     +
Sbjct: 409 LGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRIHKSMHMAEFAAKNLLELDPTSATGY 468

Query: 655 VLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLIC 714
           V L+N+YA   +W++VA VRK+MK   V K PG SW+E    VH F   D  HP+   I 
Sbjct: 469 VQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYSWIEINNAVHEFRSNDRLHPELVSIH 528

Query: 715 AMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRIL 774
             L+ L  K + AGYVPD    L DV ++ KE+ L  HSE+LA+AFGLL++P    IR+ 
Sbjct: 529 EKLDKLETKMKLAGYVPDLEFALHDVGEELKEQLLLRHSEKLAIAFGLLKVPLGVPIRVF 588

Query: 775 KNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           KNLR+C DCH+ IK IS +  REI+VRD  RFHHF+ G+CSC DYW
Sbjct: 589 KNLRVCGDCHSAIKYISAIEGREIIVRDTTRFHHFKDGLCSCSDYW 634



 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 13/332 (3%)

Query: 81  AHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEG 140
           ++N +L  Y+    + +A   FD MP+ +T S+ T+  G ++    D A     RL    
Sbjct: 105 SYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEAR----RLLVAM 160

Query: 141 HEVNPFVCTTIIKLLVSMDLPHVCWTIHACV--YKRGHQADAFVGTSLIDAYSVCGNVDA 198
            E N    + ++   V+      C  + A V  +           T++I  Y   G V  
Sbjct: 161 PEKNCVTWSAMVSGYVA------CGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGL 214

Query: 199 ARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLG 258
           A  +F  +  K +V+W  M+  Y +N   E  L+LF  M   G +PN  ++T+ L  C  
Sbjct: 215 AEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSD 274

Query: 259 LEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLM 318
           L A   GK VH    K+   +D    T L+ +Y+K GD+ D+   F ++P+KDV+ W+ M
Sbjct: 275 LSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAM 334

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILG-KQIHSNVLKVG 377
           I+ YAQ    ++AL LF  M++S + P+  TF +VL AC    ++ LG K  +S V + G
Sbjct: 335 ISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFG 394

Query: 378 LDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           + +       ++D+  + G +  ++ +    P
Sbjct: 395 IKTRPEHYGCMVDLLGRAGRLSEAVDMVKSMP 426


>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:44985847-44989750 | 20130731
          Length = 912

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/761 (30%), Positives = 417/761 (54%), Gaps = 18/761 (2%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLD-DASKLFDEMP-LTNTISFVTLAQGC 120
           G Q+HC  +K G  ++ F    L+ FY +  C   +A KL   +    + +S+ T+    
Sbjct: 134 GMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSL 193

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
             + ++  A  + +++ + G   N F    ++  + S         +HA +   G + + 
Sbjct: 194 VENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNL 253

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
            + T+++D YS C  +  A +V +     D+  WT ++  + +N    E++ +F  M + 
Sbjct: 254 VLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELS 313

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV-D 299
           G  PNN+T ++ L +   + +  +G+  H   +    + DLY+G  L+++Y K   I  +
Sbjct: 314 GLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTN 373

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A   F E+   +V+ W+ +IA +A+  R +++ +LF  M+ + V PN+FT +++L AC+ 
Sbjct: 374 AVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSK 432

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
              L+    +H +++K  +D ++ V+NAL+D YA  G I+ +  +      ++ +T+  +
Sbjct: 433 TRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCL 492

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
                Q G    A+ +   M  + ++  E + +S L A AG   ++ G Q+H  ++K+ +
Sbjct: 493 AARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGF 552

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
               +V+N+L+ +Y+KCG I+DA   F  + + +  SWN +I G+S +GL + AL+ F+ 
Sbjct: 553 QRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDD 612

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           M+    KP+ +T + ++SACS+ GLL+ G   F SM ++Y+I P ++HY C+V LLGR G
Sbjct: 613 MRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGG 672

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN 659
           + +EA+ +I ++ F+P  ++ + LL AC +  N+ LG   A+  LE+ P D   ++LL+N
Sbjct: 673 RLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLAN 732

Query: 660 MYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEW 719
           +Y  A   D     R+ M+ +G+++ PG  W+E +  VH+FS G+  + D   I   LE+
Sbjct: 733 LYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEKINEDE--ITEKLEF 790

Query: 720 LNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRI 779
           L  + R+  Y           E+++K    + H E+LA+AFG+L  PST  IRI KN  I
Sbjct: 791 LITEFRNRRYQYQ--------ENEDK----FYHPEQLAVAFGVLNAPSTSPIRIYKNSLI 838

Query: 780 CVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           C  CHT I L ++V+ REI++RD  RFH F+ G CSC D +
Sbjct: 839 CSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  259 bits (662), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 164/567 (28%), Positives = 287/567 (50%), Gaps = 12/567 (2%)

Query: 66  LHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQ 125
           +H  I+K G   DL+  N LL+ Y +   +  A  LFDEMP  + +S+ T+    +++  
Sbjct: 36  IHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKH 95

Query: 126 FDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTS 185
              AL +   +   G   N F  ++ ++   ++        IH    K G + + FVGTS
Sbjct: 96  HSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTS 155

Query: 186 LIDAYSVCG--NVDAAR---QVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
           L++ Y+ CG  +V+A +    V DG    D+VSWT M+    EN  + E+ +++ +M   
Sbjct: 156 LVEFYTKCGCCSVEAWKLLSLVKDG---GDVVSWTTMLSSLVENGKWGEAFEIYVKMIES 212

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
           G  PN +T    L +         GK +H   +    + +L + T ++++Y+K   +VDA
Sbjct: 213 GVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDA 272

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
                  P+ DV  W+ +I+ + Q+ + +EA+ +F  M  S ++PNNFT++S+L A ++ 
Sbjct: 273 IKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSI 332

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI-ENSMILFMESPEQNEVTWNTM 419
           + L LG+Q HS V+ VGL+ ++++ NAL+D+Y KC  I  N++ +F E    N + W ++
Sbjct: 333 LSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSL 392

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           I G+ +    E +  LF+ M    ++P   T S++L AC+   +L P + +H   IKT+ 
Sbjct: 393 IAGFAE-KRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKV 451

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
           + DIAVANAL+D YA  G I++A      M+ R+ +++  +    +  G    AL +   
Sbjct: 452 DIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIH 511

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           M     K ++ +    LSA +  G ++ G+ L    S     + C      +V L  + G
Sbjct: 512 MCNDGIKMDEFSLASFLSAAAGLGTMETGKQL-HCYSVKSGFQRCHSVSNSLVHLYSKCG 570

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGA 626
              +A +   +I  +P    W  L+  
Sbjct: 571 SIHDANRAFKDIS-EPDAFSWNGLISG 596



 Score =  177 bits (448), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 187/365 (51%), Gaps = 5/365 (1%)

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           G  +H   +K     DLY+   LL LYAK+  +  A+  F+EMP +DV+ W+ +++ + +
Sbjct: 33  GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTK 92

Query: 325 SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFV 384
           +    +AL+LF  M  S   PN FT +S L++C A      G QIH + +K+GL+ N FV
Sbjct: 93  TKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFV 152

Query: 385 SNALMDVYAKCG--EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
             +L++ Y KCG   +E   +L +     + V+W TM+   V+ G   +A  ++  MI +
Sbjct: 153 GTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIES 212

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
            + P E TF  +L A + F  L  G  +H+  I      ++ +  A++DMY+KC R+ DA
Sbjct: 213 GVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDA 272

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
               +   + +   W  +I G++ +    EA+++F  M+ +   PN  T+  +L+A S+ 
Sbjct: 273 IKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSI 332

Query: 563 GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKF-DEAVKLIGEIPFQPSVMVWR 621
             LD G+  F S      +E  +     +V +  +       AVK+  EI   P+VM W 
Sbjct: 333 LSLDLGEQ-FHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREIT-SPNVMCWT 390

Query: 622 ALLGA 626
           +L+  
Sbjct: 391 SLIAG 395



 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 168/362 (46%), Gaps = 3/362 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCL-DDASKL 101
           ++ +Y++LL  +      + G+Q H  ++  G   DL+  N L++ Y++   +  +A K+
Sbjct: 318 NNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKV 377

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           F E+   N + + +L  G +   + + +  +   +   G   N F  + I+         
Sbjct: 378 FREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSL 436

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
                +H  + K     D  V  +L+D Y+  G +D A  V   +  +D +++T +    
Sbjct: 437 VPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARL 496

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
            +   +  +L++   M   G + + +++ + L +  GL     GK +H  ++K+ + +  
Sbjct: 497 NQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCH 556

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V   L+ LY+K G I DA   F+++ + D   W+ +I+ ++ +     AL  F  MR +
Sbjct: 557 SVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLA 616

Query: 342 SVVPNNFTFASVLQACAAQVLLILG-KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
            V P++ T  S++ AC+   LL LG +  HS   +  +   +     L+D+  + G +E 
Sbjct: 617 GVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEE 676

Query: 401 SM 402
           +M
Sbjct: 677 AM 678



 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 58/109 (53%)

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
           +L  G+ +HS  IK    +D+ + N L+ +YAK   ++ AR  FD+M  R+ VSW  ++ 
Sbjct: 29  SLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILS 88

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
            ++     ++AL LF+ M  +   PN+ T    L +C   G  ++G  +
Sbjct: 89  SHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQI 137


>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:40624011-40626927 | 20130731
          Length = 793

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/694 (32%), Positives = 375/694 (54%), Gaps = 6/694 (0%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
            +  +Y +L+      R  +  K++H  +LK      +   N ++N Y +   + DA K+
Sbjct: 63  FEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKV 122

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD M L N +S+ ++  G S++ Q + A+ + +++ + G   +     ++IK        
Sbjct: 123 FDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDI 182

Query: 162 HVCWTIHACVYKR--GHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
            +   +HA V K   GH   +    +LI  Y+  G ++ A  VF  I  KD++SW  M+ 
Sbjct: 183 DLGRQLHAHVIKSWFGHHLTS--QNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMIT 240

Query: 220 CYAENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
            Y +  +  E+L LF  +   G Y+PN +   +   +C  L     GK VHG  +K    
Sbjct: 241 GYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR 300

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           ++++ G  L ++YAK G +  A++ F ++   D++ W+ +IA +A +  + EA++ F  M
Sbjct: 301 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 360

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
               + P++ T+ S+L  C + V L  G+QIHS ++K+G D  + V N+L+ +Y KC  +
Sbjct: 361 IHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHL 420

Query: 399 ENSMILFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
            +++ +F + S   N V+WN ++   +Q     +   L+  M  +  +P  +T +++L  
Sbjct: 421 HDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGT 480

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSW 517
           CA   +L  G QVH  +IK+    D++V N LIDMYAKCG +  AR  FD     + VSW
Sbjct: 481 CAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSW 540

Query: 518 NAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
           +++I GY+  GL  EALNLF  M     +PN++T++G LSACS+ GL+++G  L+KSM  
Sbjct: 541 SSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMET 600

Query: 578 DYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGR 637
           ++ I P  EH++C+V LL R G   EA   I +      +  W+ LL AC    N+D+  
Sbjct: 601 EHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAE 660

Query: 638 FCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVV 697
             A ++L++ P +    V+L N++A A  W+ VA +RK MK+ GV+K PG SW+E +   
Sbjct: 661 RGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKF 720

Query: 698 HYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
           H F   D+SHP   LI  MLE L  +  D GY P
Sbjct: 721 HIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 754


>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38663296-38660628 | 20130731
          Length = 745

 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/592 (36%), Positives = 340/592 (57%), Gaps = 31/592 (5%)

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK------------------- 293
           ++SC+   +  +GK +H     +    D ++   LL  Y+K                   
Sbjct: 79  IQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNY 138

Query: 294 ------------SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
                        G+I +A+  F+EM +++V  W+ M+    +   ++EAL LF  M   
Sbjct: 139 MSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVL 198

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
             VP+ ++F SVL+ CA    L +G+Q+H+ V K G + N  V  +L  +Y K G + N 
Sbjct: 199 GFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNG 258

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +    P  N V WNT++ G  Q    E  ++ +  M     +P ++TF SV+ +C+  
Sbjct: 259 ERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSEL 318

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
           A L  G Q+H+  IK   ++ ++V ++L+ MY+KCG + D+   F + ++R+ V W++MI
Sbjct: 319 ATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSMI 378

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             Y  HG   +A+ LFN  ++ N   N++TF+ +L ACS++GL DKG   F  M + Y +
Sbjct: 379 AAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGL 438

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           +  +EHYTC+V LLGR G  +EA  +I  +P     ++W+ LL AC + KN ++ R  A+
Sbjct: 439 KARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAE 498

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
            VL + P D  ++VL++ ++A AKRW NV+ VR+ MK K VKKEPG+SWVE +  VH F 
Sbjct: 499 EVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFH 558

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
            GD SHP    I   LE L  + +  GYVPD ++VL D++++EKE +L  HSE+LA+AF 
Sbjct: 559 TGDKSHPKFVEINQYLEELTSEMKMQGYVPDISSVLHDMDNEEKEYNLTHHSEKLAIAFA 618

Query: 762 LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGV 813
           L+ IP    IR++KN+R+C DCH  IK ISE+   EI+VRD +RFHHF++G+
Sbjct: 619 LMTIPKGEPIRVMKNMRVCSDCHVAIKYISEIKNLEIIVRDSSRFHHFKNGL 670



 Score =  173 bits (439), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 2/344 (0%)

Query: 186 LIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPN 245
           +I AY   GN++ A+ +FD +  +++ +W  MV    +    EE+L LF +M V+G+ P+
Sbjct: 144 MIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPD 203

Query: 246 NYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFE 305
            Y+  + L+ C  L A  VG+ VH    K  ++ +  VG  L  +Y K+G + + +   +
Sbjct: 204 EYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIK 263

Query: 306 EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
            MP  +++ W+ ++A  AQ+   +  L+ +  M+ +   P+  TF SV+ +C+    L  
Sbjct: 264 WMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQ 323

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
           GKQIH+ V+K G  S V V ++L+ +Y+KCG +++S+  F+E  E++ V W++MI  Y  
Sbjct: 324 GKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGF 383

Query: 426 LGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI-KTRYNNDIA 484
            G  EKA+ LF+     +M   EVTF S+L AC+     D GL    + + K      + 
Sbjct: 384 HGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLE 443

Query: 485 VANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
               ++D+  + G + +A      M    + + W  ++    +H
Sbjct: 444 HYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIH 487



 Score =  136 bits (342), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 187/407 (45%), Gaps = 33/407 (8%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           ++ L+Q  I     + GKQLH  I   G   D F  N LLNFY +F  L++A KLFD MP
Sbjct: 75  FSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 134

Query: 107 LTNTIS-------FVTLAQGCSRSHQFD------------------------HALHVILR 135
             N +S       ++ +    +  + FD                         AL +  R
Sbjct: 135 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSR 194

Query: 136 LFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGN 195
           +   G   + +   ++++    +    V   +HA V K G + ++ VG SL   Y   G+
Sbjct: 195 MNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGS 254

Query: 196 VDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
           +    ++   +   ++V+W  ++   A+N  +E  L  +C M++ GYRP+  T  + + S
Sbjct: 255 LCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISS 314

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
           C  L     GK +H   +KA     + V + L+ +Y+K G + D+   F E  ++DV+ W
Sbjct: 315 CSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIW 374

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL- 374
           S MIA Y    + ++A++LF+   + ++  N  TF S+L AC+   L   G      ++ 
Sbjct: 375 SSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVE 434

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
           K GL + +     ++D+  + G +E +  +    P   + + W T++
Sbjct: 435 KYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLL 481



 Score =  127 bits (319), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 35/274 (12%)

Query: 329 KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL 388
           K+A E F C     +      F+ ++Q+C     + LGKQ+HS +   G  S+ F+SN L
Sbjct: 58  KKAFESFLC----DIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHL 113

Query: 389 MDVYAKCGE-------------------------------IENSMILFMESPEQNEVTWN 417
           ++ Y+K GE                               IEN+  LF E  E+N  TWN
Sbjct: 114 LNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWN 173

Query: 418 TMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
            M+ G V+ G  E+A+ LFS M      P E +F SVLR CA   AL  G QVH+   K 
Sbjct: 174 AMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKC 233

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
            +  +  V  +L  MY K G + +       M     V+WN ++ G + +      L+ +
Sbjct: 234 GFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHY 293

Query: 538 NKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
             M+    +P+K+TFV V+S+CS    L +G+ +
Sbjct: 294 CMMKMAGYRPDKITFVSVISSCSELATLCQGKQI 327


>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:26032045-26029503 | 20130731
          Length = 633

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/600 (37%), Positives = 337/600 (56%), Gaps = 12/600 (2%)

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           + E+L ++  M    + PN +T    LKSC  L     G  +H   LK     D Y  + 
Sbjct: 40  FMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSS 99

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR-QSSVVP 345
           L+ +Y+K+     A+  F+E P    I ++ MI+ Y  +    EA++LF  M  ++    
Sbjct: 100 LINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFV 159

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N+ T   ++        L LG  +H    K G ++++ V N+ + +Y KCGE+E    +F
Sbjct: 160 NSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVF 219

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM--IGNDMQPTEVTFSSVLRACAGFAA 463
            E   ++ +TWN MI GY Q G   + + ++  M  +G  + P  VT   VL +CA   A
Sbjct: 220 DEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGG-VNPDPVTLLGVLCSCANLGA 278

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE--VSWNAMI 521
              G +V     +  + ++  + NALI+MYA+CG +  AR  FD MD+R +  VSW A+I
Sbjct: 279 QGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAII 338

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY +HG    A+ LF+ M ++  KP++  FV VLSACS+AGL +KG   F  M + Y +
Sbjct: 339 GGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGL 398

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           +P  EHY+C+V LLGR G+  EA+ LI  +  +P   VW ALLGAC + +N++L     Q
Sbjct: 399 QPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVKPDGPVWGALLGACKIHRNVELAEVAFQ 458

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
           HV+E++P + G +VLLSN+Y+  K  + V  VR  M+ + ++K+PG S+VE +G +H F 
Sbjct: 459 HVIELEPTNIGYYVLLSNLYSDTKNLEGVLKVRVMMRDRNLRKDPGCSYVEYKGKMHLFY 518

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDA-GYVPDCNAVLLDVEDDEKERHLWVHSERLALAF 760
            GDTSHP +K I  ML  L    +D  G    C       + +E      VHSE+LA+AF
Sbjct: 519 SGDTSHPQSKEIYRMLNELENLVKDIHGKDHKCQG-----KSEEPLIGAGVHSEKLAIAF 573

Query: 761 GLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
            LL       I ++KNLR+CVDCH   KL+S++V R+ +VRD  RFH F++GVCSC DYW
Sbjct: 574 ALLNTKPGTDITVMKNLRVCVDCHVFFKLVSKIVDRQFIVRDATRFHRFKNGVCSCKDYW 633



 Score =  189 bits (479), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 205/416 (49%), Gaps = 12/416 (2%)

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
           S+  +F  AL V   + +     N F    ++K    + LP     +H+ + K G Q D 
Sbjct: 35  SKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDP 94

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLF----CQ 236
           +  +SLI+ YS       AR+VFD       +S+  M+  Y  N    E+++LF    C+
Sbjct: 95  YTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCE 154

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
            R   +  N+ T+   +   L  E   +G  +HGC  K  ++ DL VG   L +Y K G+
Sbjct: 155 NR---FFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGE 211

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ-SSVVPNNFTFASVLQ 355
           +   +  F+E+  KD+I W+ MI+ YAQ+  ++  LE++  MR+   V P+  T   VL 
Sbjct: 212 VEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLC 271

Query: 356 ACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPEQNE 413
           +CA      +G+++   + + G  SN F+ NAL+++YA+CG +  +  +F  M+   ++ 
Sbjct: 272 SCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSV 331

Query: 414 VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHS 472
           V+W  +I GY   G+GE A+ LF  M+ + ++P    F SVL AC+     + GL+    
Sbjct: 332 VSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDE 391

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
           +  K          + L+D+  + GR+ +A    D M  K +   W A++    +H
Sbjct: 392 MERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVKPDGPVWGALLGACKIH 447



 Score =  169 bits (428), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 203/419 (48%), Gaps = 8/419 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           ++ ++  LL+       P  G QLH  ILK G+  D + H+ L+N Y +      A K+F
Sbjct: 58  NTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVF 117

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE-VNPFVCTTIIKLLVSMDLP 161
           DE P+  TIS+  +  G + +     A+ +  R+  E    VN      ++  ++  +  
Sbjct: 118 DESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKL 177

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            + + +H C +K G + D  VG S +  Y  CG V+  R+VFD I  KD+++W  M+  Y
Sbjct: 178 RLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGY 237

Query: 222 AENCFYEESLQLFCQMR-VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           A+N      L+++ +MR V G  P+  T+   L SC  L A G+G+ V     +  +  +
Sbjct: 238 AQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSN 297

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPK--KDVIPWSLMIARYAQSDRSKEALELFHCM 338
            ++   L+ +YA+ G++V A+  F+ M +  K V+ W+ +I  Y      + A+ELF  M
Sbjct: 298 SFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVM 357

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV-LKVGLDSNVFVSNALMDVYAKCGE 397
            +S V P+   F SVL AC+   L   G +    +  K GL       + L+D+  + G 
Sbjct: 358 VRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGR 417

Query: 398 IENSMILF-MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           ++ +M L  +   + +   W  ++       + E A   F  +I  +++PT + +  +L
Sbjct: 418 LKEAMDLIDLMKVKPDGPVWGALLGACKIHRNVELAEVAFQHVI--ELEPTNIGYYVLL 474



 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 161/324 (49%), Gaps = 4/324 (1%)

Query: 306 EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
           E  +     W+  +   ++  +  EAL ++  M +SS  PN FTF  +L++CA   L   
Sbjct: 18  ESKQNPTTAWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFT 77

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
           G Q+HS++LK G   + +  ++L+++Y+K      +  +F ESP    +++N MI GY  
Sbjct: 78  GSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTN 137

Query: 426 LGDGEKAMNLFSSMI-GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
                +A+ LF  M+  N      VT   ++        L  G  +H    K  + ND++
Sbjct: 138 NMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLS 197

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT- 543
           V N+ + MY KCG +   R  FD++  ++ ++WNAMI GY+ +G +   L ++ +M++  
Sbjct: 198 VGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVG 257

Query: 544 NCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDE 603
              P+ +T +GVL +C+N G    G+ + K + + +           ++ +  R G    
Sbjct: 258 GVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDR-FGFRSNSFLMNALINMYARCGNLVR 316

Query: 604 AVKLIGEIPFQP-SVMVWRALLGA 626
           A ++   +  +  SV+ W A++G 
Sbjct: 317 AREVFDCMDERSKSVVSWTAIIGG 340


>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:21517672-21518970 | 20130731
          Length = 432

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/432 (46%), Positives = 286/432 (66%), Gaps = 2/432 (0%)

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           +YAK G+I  +  +F   PE++ V+   +I GY QLG  E+A+ LF  + G  M+   VT
Sbjct: 1   MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD 510
           ++ VL A +G AALD G QVH+  +++   + + + N+LIDMY+KCG +  +R  FD M 
Sbjct: 61  YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 120

Query: 511 KREEVSWNAMICGYSMHGLSTEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
           +R  +SWNAM+ GYS HG   E L LF  M ++T  KP+ +T + VLS CS+ GL DKG 
Sbjct: 121 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 180

Query: 570 SLFKSMSQ-DYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
           ++F  MS     +EP +EHY C+V LLGR G+ +EA + I ++PF+P+  +W +LLGAC 
Sbjct: 181 NIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 240

Query: 629 VQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGL 688
           V  N+D+G F  Q +LE++P + G +V+LSN+YA A RW++V+S+R  M +K V KEPG 
Sbjct: 241 VHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGR 300

Query: 689 SWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERH 748
           S +E   V+H F   D SHP  + IC  ++ L+   ++ GYVPD + VL DV++++KE+ 
Sbjct: 301 SSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKI 360

Query: 749 LWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHH 808
           L  HSE+LAL+FGL+  P++  IR++KNLRICVDCH   K IS+V  RE+ +RD NRFH 
Sbjct: 361 LLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHR 420

Query: 809 FQHGVCSCGDYW 820
              G CSC DYW
Sbjct: 421 IVGGKCSCEDYW 432



 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 149/287 (51%), Gaps = 7/287 (2%)

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
           +YAK G I +A+  FE +P++DV+  + +I+ YAQ    +EALELF  ++   +  N  T
Sbjct: 1   MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           +  VL A +    L LGKQ+H++VL+  + S V + N+L+D+Y+KCG +  S  +F    
Sbjct: 61  YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 120

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI-GNDMQPTEVTFSSVLRACAGFAALDPGL 468
           E+  ++WN M+VGY + G+G + + LF+ M     ++P  VT  +VL  C+     D GL
Sbjct: 121 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 180

Query: 469 QVHS--LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYS 525
            + +   + K      +     ++D+  + GR+ +A     KM      + W +++    
Sbjct: 181 NIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 240

Query: 526 MHGLSTEALNLFNKMQQTNCKP-NKLTFVGVLSACSNAGLLDKGQSL 571
           +H  S   +  F   Q    +P N   +V + +  ++AG  +   SL
Sbjct: 241 VH--SNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSL 285



 Score =  105 bits (261), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 124/235 (52%), Gaps = 4/235 (1%)

Query: 190 YSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTI 249
           Y+  G +  AR VF+ +  +D+VS T ++  YA+    EE+L+LF +++  G + N  T 
Sbjct: 2   YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61

Query: 250 TAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK 309
           T  L +  GL A  +GK VH   L++     + +   L+++Y+K G++  ++  F+ M +
Sbjct: 62  TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 121

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSS-VVPNNFTFASVLQACAAQVLLILGKQ 368
           + VI W+ M+  Y++    +E L+LF  MR+ + V P++ T  +VL  C+   L   G  
Sbjct: 122 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 181

Query: 369 IHSNVL--KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
           I +++   K+ ++  +     ++D+  + G +E +     + P E     W +++
Sbjct: 182 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 236



 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 3/224 (1%)

Query: 88  FYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFV 147
            Y +   + +A  +F+ +P  + +S   +  G ++    + AL +  RL  EG + N   
Sbjct: 1   MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60

Query: 148 CTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIF 207
            T ++  L  +    +   +H  V +    +   +  SLID YS CGN+  +R++FD ++
Sbjct: 61  YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 120

Query: 208 CKDMVSWTGMVGCYAENCFYEESLQLFCQMR-VMGYRPNNYTITAALKSCL--GLEAFGV 264
            + ++SW  M+  Y+++    E L+LF  MR     +P++ TI A L  C   GLE  G+
Sbjct: 121 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 180

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP 308
                  + K   +  +     +++L  +SG + +A  F ++MP
Sbjct: 181 NIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMP 224


>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:36572831-36570446 | 20130731
          Length = 700

 Score =  408 bits (1048), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/645 (35%), Positives = 347/645 (53%), Gaps = 40/645 (6%)

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
           D     S+I A  +C +   A ++FD +  ++ +SWT ++  +       E+ + F  M 
Sbjct: 93  DTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMP 152

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
            +                                     D+D+     ++  Y  +G + 
Sbjct: 153 YV-------------------------------------DKDVATWNAMVNGYCNNGRVN 175

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ-SSVVPNNFTFASVLQAC 357
           DA   F +MP +DVI W+ +I    ++ +S +AL  F  M   S V  ++ T    L A 
Sbjct: 176 DALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAA 235

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNV--FVSNALMDVYAKCGEIENSMILFMESPEQNEVT 415
           A  +    G QIH  + K G    +  FVS +L+  YA C  + ++  +F E+  +N V 
Sbjct: 236 AKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVV 295

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           W  ++ G        +A+ +FS M+  ++ P E +F+S L +C G   L+ G  +H+  I
Sbjct: 296 WTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGI 355

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           K    N +   N+L+ MY+KCG I DA   F  + ++  VSWN++I G + HG  T AL 
Sbjct: 356 KMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALV 415

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           LF +M +   + +++T  G+LSACS +G+L K +  F   ++  +++  +EHY CMV +L
Sbjct: 416 LFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVL 475

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHV 655
           GR G+ +EA  L   +P + + MVW  LL AC V  ++D+    A+ + EM+P     +V
Sbjct: 476 GRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYV 535

Query: 656 LLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICA 715
           LLSN+YA ++RW  VA +R  MK  G+ K+PG SW+  +G+ H F   D SHP  + I  
Sbjct: 536 LLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYE 595

Query: 716 MLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILK 775
            L WL  K R+ GY+PD    L DVE ++ E  L  HSERLA+AFGLL      +I I+K
Sbjct: 596 KLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMK 655

Query: 776 NLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           NLR+C DCHT I L++++V REIVVRD +RFHHF++G+CSCGDYW
Sbjct: 656 NLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 700



 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 19/351 (5%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           D+   N ++N Y     ++DA +LF +MP  + IS+ ++  G  R+ +   AL     + 
Sbjct: 157 DVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMV 216

Query: 138 KEGHEVNPFVCTTIIKLLVS----MDLPHVCWTIHACVYKRGH--QADAFVGTSLIDAYS 191
             G        TT++  L +    +D  +    IH C++K G     D FV  SL+  Y+
Sbjct: 217 --GFSGVGISSTTLVCGLSAAAKILDF-YAGIQIHCCMFKFGFCCGLDEFVSASLVTFYA 273

Query: 192 VCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITA 251
            C  +  A +VF    CK++V WT ++     N  + E+L++F +M      PN  + T+
Sbjct: 274 SCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTS 333

Query: 252 ALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKD 311
           AL SC+GLE    G+ +H   +K   +  +Y G  L+ +Y+K G I DA   F+ + +K+
Sbjct: 334 ALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKN 393

Query: 312 VIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL-----ILG 366
           V+ W+ +I   AQ      AL LF  M +  V  +  T   +L AC+   +L       G
Sbjct: 394 VVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFG 453

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTW 416
                  +K+ ++        ++DV  +CGE+E +  L    P E N + W
Sbjct: 454 YFARKRSMKLTVEHYA----CMVDVLGRCGEVEEAEALATSMPVEANSMVW 500



 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 165/365 (45%), Gaps = 32/365 (8%)

Query: 293 KSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF-------------HCMR 339
           K+  +  A+  F ++P   V  ++ ++  YA ++   EA+ LF             + + 
Sbjct: 42  KNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVI 101

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG--------------LDSNVFVS 385
           ++S++ N+F  A  L     Q   I    I    L  G              +D +V   
Sbjct: 102 KASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATW 161

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDM 444
           NA+++ Y   G + +++ LF + P ++ ++W ++IVG  + G   +A+  F +M+G + +
Sbjct: 162 NAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGV 221

Query: 445 QPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDA 502
             +  T    L A A       G+Q+H    K  +    D  V+ +L+  YA C R+ DA
Sbjct: 222 GISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDA 281

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
              F +   +  V W A++ G  ++    EAL +F++M + N  PN+ +F   L++C   
Sbjct: 282 CKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGL 341

Query: 563 GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRA 622
             L+KG+ +  +      +E  +     +V +  + G   +A+ +   I  + +V+ W +
Sbjct: 342 EDLEKGR-VIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGIC-EKNVVSWNS 399

Query: 623 LLGAC 627
           ++  C
Sbjct: 400 VIVGC 404



 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 89/198 (44%), Gaps = 4/198 (2%)

Query: 62  AGKQLHCDILKRG--APLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQG 119
           AG Q+HC + K G    LD F    L+ FY     + DA K+F E    N + +  L  G
Sbjct: 243 AGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTG 302

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
           C  + +   AL V   + +     N    T+ +   V ++       IHA   K G +  
Sbjct: 303 CGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENA 362

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG-MVGCYAENCFYEESLQLFCQMR 238
            + G SL+  YS CG +  A  VF GI  K++VSW   +VGC    C    +L LF +M 
Sbjct: 363 VYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGC-GTWALVLFKEML 421

Query: 239 VMGYRPNNYTITAALKSC 256
             G   +  T+T  L +C
Sbjct: 422 REGVESDEITLTGLLSAC 439


>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:20818019-20812038 | 20130731
          Length = 1056

 Score =  405 bits (1040), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/556 (39%), Positives = 326/556 (58%), Gaps = 36/556 (6%)

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSK-EALELFHCM-RQSSVVPNNFTFASVLQAC 357
           A   F+++P+ D+  ++ MI  ++ S  S  +++ +F  + R S   PN ++F     AC
Sbjct: 62  AHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC 121

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE-----------------N 400
              + +  G+Q+ ++ +KVGLD NVFV NAL+ ++ K G +E                 N
Sbjct: 122 GNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWN 181

Query: 401 SMI--------------LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQP 446
           +MI              LF E  E++ V+W+T+I GYVQ+G   +A++ F  M+ ++++P
Sbjct: 182 TMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKP 241

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTF 506
            E T  S L AC+   ALD G  +H    +     +  +  +LIDMYAKCG I+ A   F
Sbjct: 242 NEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVF 301

Query: 507 DKMD-KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLL 565
            +   KR+   WNAMI G++MHG   EA+N+F KM+     PNK+TF+ +L+ACS+  ++
Sbjct: 302 HEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMV 361

Query: 566 DKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLG 625
            +G+S F+ M+ DY I P IEHY CMV LL R G   ++ ++I  +P  P V +W ALL 
Sbjct: 362 KEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLN 421

Query: 626 ACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVR-KNMKRKGVKK 684
           AC + K+++ G    + + E+ P+  G +VLL N+Y+ + RW+    VR KN      KK
Sbjct: 422 ACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKK 481

Query: 685 EPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDE 744
            PG S +E  GV H F VGD SHP ++ I + L+ +  K + AGYVP+   VLLD +D+E
Sbjct: 482 IPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDDEE 541

Query: 745 -KERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDI 803
            KE  L VHSE+LA+AFGL+       IRI+KNLR+C DCH   K IS+V  R I+VRD 
Sbjct: 542 DKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDR 601

Query: 804 NRFHHFQHGVCSCGDY 819
            R+HHF+ G+CSC DY
Sbjct: 602 MRYHHFKDGICSCKDY 617



 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 172/359 (47%), Gaps = 36/359 (10%)

Query: 199 ARQVFDGIFCKDMVSWTGMVGCYAENCF-YEESLQLFCQM-RVMGYRPNNYTITAALKSC 256
           A ++FD I   D+  +  M+  ++ +   Y +S+ +F  + R  GY PN Y+   A  +C
Sbjct: 62  AHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC 121

Query: 257 ------------------LGLEA-----------FGVGKSVHGC--ALKACYDQDLYVGT 285
                             +GL+            FG    V        +  D+D Y   
Sbjct: 122 GNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWN 181

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            ++  Y  SG++V A+  F+EM ++DV+ WS +IA Y Q     EAL+ FH M QS V P
Sbjct: 182 TMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKP 241

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N +T  S L AC+  V L  GK IH  + +  +  N  +  +L+D+YAKCGEI+++  +F
Sbjct: 242 NEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVF 301

Query: 406 MESPEQNEV-TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA-GFAA 463
            E   + +V  WN MI G+   G  E+A+N+F  M    + P +VTF ++L AC+ G+  
Sbjct: 302 HEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMV 361

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMI 521
            +       +      N +I     ++D+ ++ G + D+      M    +V+ W A++
Sbjct: 362 KEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALL 420



 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 204/488 (41%), Gaps = 81/488 (16%)

Query: 61  NAGKQLHCDILKRGA-PLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQG 119
           N  KQ H +++      L + A+  L N  V    L  A KLFD++P  +   + T+ + 
Sbjct: 26  NQIKQTHANLITTAQITLPVIANKFLKN--VALASLTYAHKLFDQIPQPDLFIYNTMIKS 83

Query: 120 CSRS-HQFDHALHVILRLFK-------------------------EGHEV---------- 143
            S S H +  ++ V   L +                         EG +V          
Sbjct: 84  HSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLD 143

Query: 144 -NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQV 202
            N FV   +I +            +      R    D +   ++I AY   GN+  A+++
Sbjct: 144 GNVFVVNALIGMFGKWGRVEDARNVFDSAVDR----DFYSWNTMIGAYVGSGNMVLAKEL 199

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
           FD +  +D+VSW+ ++  Y +   + E+L  F +M     +PN YT+ +AL +C  L A 
Sbjct: 200 FDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVAL 259

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA-QLFFEEMPKKDVIPWSLMIAR 321
             GK +H    +     +  +   L+++YAK G+I  A  +F E   K+ V PW+ MI  
Sbjct: 260 DQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGG 319

Query: 322 YAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDS 380
           +A   + +EA+ +F  M+   V PN  TF ++L AC+   ++  GK     +    G++ 
Sbjct: 320 FAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINP 379

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI 440
            +     ++D+ ++ G +++S  + +  P                               
Sbjct: 380 EIEHYGCMVDLLSRSGHLKDSEEMILSMP------------------------------- 408

Query: 441 GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIN 500
              M P    + ++L AC  +  ++ G ++  + IK    N I     L ++Y+  GR N
Sbjct: 409 ---MAPDVAIWGALLNACRIYKDMERGYRIGRI-IKEIDPNHIGCNVLLGNIYSTSGRWN 464

Query: 501 DARLTFDK 508
           +AR+  +K
Sbjct: 465 EARMVREK 472


>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:1721493-1719058 | 20130731
          Length = 774

 Score =  405 bits (1040), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/669 (35%), Positives = 368/669 (55%), Gaps = 31/669 (4%)

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           Q D F+  +L++ Y  CG++D AR +FD +  ++ VSWT +V  YA+     E   LF  
Sbjct: 112 QNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSG 171

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK-SG 295
           M +  +RPN +   + L +C   +    G  VH  ALK   D  +YV   L+ +Y+K SG
Sbjct: 172 M-LACFRPNEFAFASVLCACEEQDV-KYGLQVHAAALKMSLDFSVYVANALITMYSKCSG 229

Query: 296 DIV--------DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNN 347
                      DA + F+ M  +++I W+ MI+ +       +A+ LF  M  + +  N+
Sbjct: 230 GFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNS 289

Query: 348 FTFASVLQA---CAAQVLLILGK-------QIHSNVLKVGLDSNVFVSNALMDVYAKCG- 396
            T   VL +   C +    I          Q+H   +K GL S V V  AL+  YA  G 
Sbjct: 290 TTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGG 349

Query: 397 EIENSMILFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
            I +   LF++ S E + V+W  +I  + +  D E+A  LF  +   +      TFS  L
Sbjct: 350 HISDCFKLFLDTSGEHDIVSWTAIISVFAE-RDPEQAFLLFCQLHRENFVLDRHTFSIAL 408

Query: 456 RACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEV 515
           +ACA F       +VHS  +K  ++ND  V+NALI  Y + G +  +   F +M   + V
Sbjct: 409 KACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLV 468

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           SWN+M+  Y++HG + +AL+LF +M   +  P+  TFV +L+ACS+AGL+++G  +F SM
Sbjct: 469 SWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSM 525

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDL 635
           ++ + I P ++HY+CMV L GR GK  EA +LI ++P +P  ++W +LLG+C      DL
Sbjct: 526 TESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADL 585

Query: 636 GRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQG 695
            +  A     + P +   ++ +SN+Y+    +     +RK M+   V+K PGLSWVE   
Sbjct: 586 AKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGK 645

Query: 696 VVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSER 755
            VH F+ G   HP  + I + LE L  + ++ GY P+  + L D+E +  E  L+ HSE+
Sbjct: 646 QVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEK 705

Query: 756 LALAFGLLRIP-STCS---IRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQH 811
           +AL F ++    S C+   I+I+KN+RICVDCH  +KL S++ Q+EIVVRD NRFHHF++
Sbjct: 706 MALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKY 765

Query: 812 GVCSCGDYW 820
             CSC DYW
Sbjct: 766 ATCSCNDYW 774



 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 258/568 (45%), Gaps = 46/568 (8%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPL--DLFAHNILLNFYVQFDCLDD 97
           P L    YA L     Q ++   G  LH  IL +   +  D+F  N LLN Y +   LD 
Sbjct: 74  PSLTLQDYAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDY 133

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHV---ILRLFKEGHEVNPFVCTTIIKL 154
           A  LFD+MP  N +S+  L  G ++         +   +L  F+     N F   +++  
Sbjct: 134 ARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLACFRP----NEFAFASVLCA 189

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCG---------NVDAARQVFDG 205
               D+ +    +HA   K       +V  +LI  YS C            D A  VF  
Sbjct: 190 CEEQDVKY-GLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKS 248

Query: 206 IFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS---CLGLEAF 262
           +  ++++SW  M+  +      ++++ LF  M   G R N+ T+   L S   C+     
Sbjct: 249 MEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSD- 307

Query: 263 GVGKSVHGCALKACYD-----------QDLYVGTELLELYAK-SGDIVDA-QLFFEEMPK 309
            +  + H   LK C+             ++ V T L++ YA   G I D  +LF +   +
Sbjct: 308 DINNTHH---LKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGE 364

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
            D++ W+ +I+ +A+ D  ++A  LF  + + + V +  TF+  L+ACA  V      ++
Sbjct: 365 HDIVSWTAIISVFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEV 423

Query: 370 HSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDG 429
           HS V+K G  ++  VSNAL+  Y + G +  S  +F E    + V+WN+M+  Y   G  
Sbjct: 424 HSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRA 483

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTIKTRYNNDIAVANA 488
           + A++LF  M   D+ P   TF ++L AC+    ++ G Q+ +S+T        +   + 
Sbjct: 484 KDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSC 540

Query: 489 LIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           ++D+Y + G+I +A     KM  K + V W++++     HG +  A    +K +  + K 
Sbjct: 541 MVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPK- 599

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           N L ++ + +  S+ G   +   + K M
Sbjct: 600 NSLAYIQMSNIYSSGGSFIEAGLIRKEM 627



 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 7/171 (4%)

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           V+ K   ++N     +  PE      NT I      G+ EKA+    S++  +   T   
Sbjct: 25  VFPKFCILQNLYYASIAQPETIARNVNTQIHTLSLQGNLEKAL----SLVYTNPSLTLQD 80

Query: 451 FSSVLRACAGFAALDPGLQVHS--LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK 508
           ++ +  ACA    +  G+ +H   L    +  NDI + N L++MY KCG ++ AR  FD+
Sbjct: 81  YAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQ 140

Query: 509 MDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSAC 559
           M +R  VSW  ++ GY+  GL  E   LF+ M     +PN+  F  VL AC
Sbjct: 141 MPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLAC-FRPNEFAFASVLCAC 190


>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38735797-38738097 | 20130731
          Length = 766

 Score =  400 bits (1027), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/701 (33%), Positives = 363/701 (51%), Gaps = 13/701 (1%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRG--APLDLFAHNILLNFYVQFDCLD 96
           QP +D      LL+   QN        +H  +LK G     +L   N +++ Y +    D
Sbjct: 67  QPLID------LLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYD 120

Query: 97  DASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLV 156
            A K+FD M   N  S+  +    +    + +AL +   + ++G  ++ F  + +++  V
Sbjct: 121 SARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCV 180

Query: 157 SMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG 216
            +D       +HA V  RG    A VGTSL++ Y+  G  + +  VF+ +   + VSW  
Sbjct: 181 GLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNA 240

Query: 217 MVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC 276
           M+  +  N  Y ++      M   G  PN  T     K+   L        VH  A +  
Sbjct: 241 MISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWG 300

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVI--PWSLMIARYAQSDRSKEALEL 334
            D +  VGT L+ +Y+K G + DA++ F+      ++  PW+ MI  Y+Q+    EALE+
Sbjct: 301 LDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEM 360

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS-NVFVSNALMDVYA 393
           F  M Q+ V P+ +TF  V  + A    L   K+ H   LK G D+  + V NAL D Y 
Sbjct: 361 FTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYV 420

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           KC  +E    +F +  +++ V+W TM+  Y Q  +  KA+ +FS M      P   TFSS
Sbjct: 421 KCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSS 480

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           V+ AC G   L+ G Q+H L  K   + +  + +ALIDMY+KCG + +A+  F+++   +
Sbjct: 481 VITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPD 540

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK 573
            V+W A+I  Y+ HGL  +AL LF KM+Q+  K N +T + +L ACS+ G+++ G  +F 
Sbjct: 541 TVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFN 600

Query: 574 SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI 633
            M   Y + P +EHY C+V LLGR+G+ DEAV  I ++P +P  MVW+ LLGAC +  N 
Sbjct: 601 QMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRIHGNA 660

Query: 634 DLGRFCAQHVLEMKPHDD--GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
           +LG   AQ +L  +P  +   T+VLLSN Y  +   ++   +R  MK +G++KEPG SW+
Sbjct: 661 ELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPGYSWI 720

Query: 692 ENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPD 732
             +G VH F   D  HP    I  MLE L ++ +     P+
Sbjct: 721 SVRGEVHKFYARDQQHPQKDKIYTMLEELTRRIKHMHCEPE 761



 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 4/226 (1%)

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL---DSNVFVSNALMDVYAKCGEIENS 401
           PN      +L++C     L     IH +VLK G    D+ VF+ N ++  Y+KC + +++
Sbjct: 64  PNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFL-NHVVHAYSKCKDYDSA 122

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F    E+N  +W  MIV   + G    A+ LF  M+   +      FS+VL++C G 
Sbjct: 123 RKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGL 182

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            ++  G  VH+  +   +     V  +L+++YAK G    +   F+ M    +VSWNAMI
Sbjct: 183 DSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMI 242

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDK 567
            G++ +GL  +A +    M +    PNK TF+ +  A    G +++
Sbjct: 243 SGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINR 288


>Medtr1g084570.1 | PPR containing plant-like protein | HC |
           chr1:37638715-37636265 | 20130731
          Length = 606

 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/562 (38%), Positives = 325/562 (57%), Gaps = 3/562 (0%)

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           T LI +Y   G+ + A  +FD +  +D+++WT M+  Y     +  +  +F  M   G +
Sbjct: 45  TDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALK-ACYDQDLYVGTELLELYAKSGDIVD-AQ 301
           PN +T++A LK+C  L+A   GK VHG A+K       +YV   L+++YA   D +D A+
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNAR 164

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
           L FE++  K+ + W+ +I  Y     +   L +F  M       + F+F+  + ACA+  
Sbjct: 165 LVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIG 224

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
              LGKQ+H+ V+  G +SN+ V NA++D+Y +C     +  LF E  +++ +TWNT+I 
Sbjct: 225 SSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIA 284

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
           G+  L D  +++ +FS M+     P   TF+SV+ ACA  A L  G Q+H   I    +N
Sbjct: 285 GFETL-DSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDN 343

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           ++ ++NALIDMYAKCG + D+   F  M     VSW +M+ GY  HG   EA++LFN+M 
Sbjct: 344 NLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMV 403

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKF 601
            +  KP+K+ F+ VLSACS+AGL+D+G   F+ M+  YN+ P  + Y C+V LL R G+ 
Sbjct: 404 GSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRV 463

Query: 602 DEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMY 661
            EA +LI  +PF+P   +W ALLGAC   K   + +  A  VLEMKP+  GT+VLLSN  
Sbjct: 464 KEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFS 523

Query: 662 AVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLN 721
           A    W + AS+RK M+    KKE G SW+E +  V  F VGD     NK +C +LE L 
Sbjct: 524 AAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLI 583

Query: 722 KKTRDAGYVPDCNAVLLDVEDD 743
           +  +DAGYV D +    D+ED+
Sbjct: 584 RHMKDAGYVLDLDCSAHDLEDE 605



 Score =  228 bits (582), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 253/484 (52%), Gaps = 11/484 (2%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           L+  Y      ++A  LFDEMP  + I++ ++  G +  +    A +V   + ++G + N
Sbjct: 47  LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPN 106

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA-FVGTSLIDAYSV-CGNVDAARQV 202
            F  + ++K   S+        +H    K G Q  + +V  +L+D Y+  C ++D AR V
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
           F+ I  K+ VSWT ++  Y         L++F QM +     + ++ + A+ +C  + + 
Sbjct: 167 FEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS 226

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
            +GK VH   +   ++ +L V   +L++Y +     +A+  F EM +KD I W+ +IA +
Sbjct: 227 NLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF 286

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNV 382
              D S E+L +F  M      PN FTF SV+ ACA   +L  G+Q+H  ++  GLD+N+
Sbjct: 287 ETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL 345

Query: 383 FVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
            +SNAL+D+YAKCG + +S  +F      N V+W +M++GY   G G++A++LF+ M+G+
Sbjct: 346 ELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGS 405

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN---DIAVANALIDMYAKCGRI 499
            ++P ++ F +VL AC+    +D GL+   L   T Y N   D  +   ++D+ ++ GR+
Sbjct: 406 GIKPDKIVFMAVLSACSHAGLVDEGLRYFRLM--TSYYNVAPDRDIYACVVDLLSRAGRV 463

Query: 500 NDARLTFDKMD-KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSA 558
            +A    + M  K +E  W A++     +     ++     ++    KPNK     +LS 
Sbjct: 464 KEAYELIENMPFKPDESIWVALLGACKKY--KQPSIQKLAALKVLEMKPNKAGTYVLLSN 521

Query: 559 CSNA 562
            S A
Sbjct: 522 FSAA 525



 Score =  147 bits (370), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 180/364 (49%), Gaps = 9/364 (2%)

Query: 63  GKQLHCDILKRGAP-LDLFAHNILLNFYVQF-DCLDDASKLFDEMPLTNTISFVTLAQGC 120
           GK +H   +K G     ++  N L++ Y    D +D+A  +F+++   N +S+ TL  G 
Sbjct: 126 GKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGY 185

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
           +        L V  ++F E  E++PF  +  +    S+   ++   +HA V   G +++ 
Sbjct: 186 THRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNL 245

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
            V  +++D Y  C     A+Q+F  +  KD ++W  ++  + E     ESL +F QM   
Sbjct: 246 PVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF-ETLDSYESLCIFSQMVSE 304

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
           G+ PN +T T+ + +C  L     G+ +HG  +    D +L +   L+++YAK G++ D+
Sbjct: 305 GFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADS 364

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
              F  M   +++ W+ M+  Y      KEA++LF+ M  S + P+   F +VL AC+  
Sbjct: 365 HKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHA 424

Query: 361 VLLILGK---QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTW 416
            L+  G    ++ ++   V  D +++    ++D+ ++ G ++ +  L    P + +E  W
Sbjct: 425 GLVDEGLRYFRLMTSYYNVAPDRDIYA--CVVDLLSRAGRVKEAYELIENMPFKPDESIW 482

Query: 417 NTMI 420
             ++
Sbjct: 483 VALL 486



 Score =  109 bits (273), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 22/306 (7%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           N GKQ+H  ++  G   +L   N +L+ Y +  C  +A +LF EM   +TI++ TL  G 
Sbjct: 227 NLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF 286

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
                ++ +L +  ++  EG   N F  T++I    ++ + +    +H  +  RG   + 
Sbjct: 287 ETLDSYE-SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL 345

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
            +  +LID Y+ CGNV  + ++F G+   ++VSWT M+  Y  +   +E++ LF +M   
Sbjct: 346 ELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGS 405

Query: 241 GYRPNNYTITAALKSCL-------GLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
           G +P+     A L +C        GL  F +  S +  A     D+D+Y    +++L ++
Sbjct: 406 GIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAP----DRDIYAC--VVDLLSR 459

Query: 294 SGDIVDAQLFFEEMP-KKDVIPWSLMIA---RYAQSDRSKEA----LELFHCMRQSSVVP 345
           +G + +A    E MP K D   W  ++    +Y Q    K A    LE+      + V+ 
Sbjct: 460 AGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLL 519

Query: 346 NNFTFA 351
           +NF+ A
Sbjct: 520 SNFSAA 525


>Medtr5g044260.1 | PPR containing plant-like protein | HC |
           chr5:19452918-19451090 | 20130731
          Length = 565

 Score =  398 bits (1022), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/518 (39%), Positives = 318/518 (61%), Gaps = 13/518 (2%)

Query: 315 WSLMIARYAQSDRSKE-ALELFHCM---RQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
           W+++I  Y++S   K+ A+ L+  +   +++ + P+  T+  VL+ACA    L  GKQ+H
Sbjct: 49  WNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFEGKQVH 108

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPE-QNEVTWNTMIVGYVQLGDG 429
           ++VLK+G + + ++ N+L+  YA CG +E +  +F    E +N V+WN MI  Y ++GD 
Sbjct: 109 AHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDY 168

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN---DIAVA 486
           +  + +F  M+    +P   T  SV+RAC G  +L  G+ VH+  +K    N   D+ V 
Sbjct: 169 DIVLIMFCEMM-KVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVN 227

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT-NC 545
             L+DMY KCG +  A+  F+ M  R+  SWN++I G+++HG +  AL+ F +M +    
Sbjct: 228 TCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKI 287

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAV 605
            PN +TFVGVLSAC+++G++D+G   F+ M+++YN+EP + HY C+V L  R G   EA+
Sbjct: 288 VPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEAL 347

Query: 606 KLIGEIPFQPSVMVWRALLGACVVQ-KNIDLGRFCAQHVLEMKPHD-DGTHVLLSNMYAV 663
            ++ E+P +P  ++WR+LL AC  Q  +++L    A+ + E       G +VLLS +YA 
Sbjct: 348 NVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYAS 407

Query: 664 AKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKK 723
           A RW++V  +RK M  KGV K+PG S +E  G  H F  GDT+HP +K I   +  + +K
Sbjct: 408 ASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEK 467

Query: 724 TRDAGYVPD-CNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVD 782
               GY+PD   A L+D  ++ K+  + +HSERLA+AFGLL    +  IR+ KNLR+C D
Sbjct: 468 LESVGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKNLRVCND 527

Query: 783 CHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           CH V KLIS +   EI+VRD  RFHHF+ G CSC DYW
Sbjct: 528 CHKVTKLISRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565



 Score =  133 bits (334), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 177/365 (48%), Gaps = 37/365 (10%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           KQ+H  IL+     + F  NIL+  Y +       S L  +  +    + +T  +     
Sbjct: 31  KQIHAQILRTIHTPNSFTWNILIQSYSK-------STLHKQKAILLYKAIITEQEN---- 79

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
                       LF + H   PFV      L    +   V    HA V K G + D ++ 
Sbjct: 80  -----------ELFPDKHTY-PFVLKACAYLFSLFEGKQV----HAHVLKLGFELDTYIC 123

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFC--KDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
            SLI  Y+ CG ++ AR+VFD + C  +++VSW  M+  YA+   Y+  L +FC+M  + 
Sbjct: 124 NSLIHFYASCGYLETARKVFDRM-CEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV- 181

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ---DLYVGTELLELYAKSGDIV 298
           Y P+ YT+ + +++C GL +  +G  VH   LK C      D+ V T L+++Y K G + 
Sbjct: 182 YEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLE 241

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQAC 357
            A+  FE M  +DV  W+ +I  +A   ++K AL+ F   ++   +VPN+ TF  VL AC
Sbjct: 242 IAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSAC 301

Query: 358 AAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVT 415
               ++  G      + K   ++ ++     L+D+YA+ G I+ ++ +  E P + + V 
Sbjct: 302 NHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVI 361

Query: 416 WNTMI 420
           W +++
Sbjct: 362 WRSLL 366



 Score =  130 bits (327), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 164/334 (49%), Gaps = 16/334 (4%)

Query: 201 QVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR----PNNYTITAALKSC 256
           Q+   I   +  +W  ++  Y+++  +++   L  +  +        P+ +T    LK+C
Sbjct: 36  QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKAC 95

Query: 257 LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK-KDVIPW 315
             L +   GK VH   LK  ++ D Y+   L+  YA  G +  A+  F+ M + ++V+ W
Sbjct: 96  AYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           ++MI  YA+       L +F C       P+ +T  SV++AC     L LG  +H+ VLK
Sbjct: 156 NVMIDSYAKVGDYDIVLIMF-CEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLK 214

Query: 376 VGLDSN----VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEK 431
              D N    V V+  L+D+Y KCG +E +  +F     ++  +WN++I+G+   G  + 
Sbjct: 215 -KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKA 273

Query: 432 AMNLFSSMIG-NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--A 488
           A++ F  M+    + P  +TF  VL AC     +D GL    +  K  YN + ++ +   
Sbjct: 274 ALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTK-EYNVEPSLVHYGC 332

Query: 489 LIDMYAKCGRINDARLTFDKMD-KREEVSWNAMI 521
           L+D+YA+ G I +A     +M  K + V W +++
Sbjct: 333 LVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLL 366



 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 21/296 (7%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D H+Y  +L+          GKQ+H  +LK G  LD +  N L++FY     L+ A K+F
Sbjct: 84  DKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVF 143

Query: 103 DEM-PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           D M    N +S+  +    ++   +D  L +   + K  +E + +   ++I+    +   
Sbjct: 144 DRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGLGSL 202

Query: 162 HVCWTIHACVYKRGHQ---ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
            +   +HA V K+  +    D  V T L+D Y  CG+++ A+QVF+G+  +D+ SW  ++
Sbjct: 203 SLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSII 262

Query: 219 GCYAENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSC-------LGLEAFGVGKSVHG 270
             +A +   + +L  F +M +V    PN+ T    L +C        GL  F +    + 
Sbjct: 263 LGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYN 322

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPW-SLMIARYAQ 324
                  +  L     L++LYA++G I +A     EMP K D + W SL+ A Y Q
Sbjct: 323 V------EPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQ 372


>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38323846-38321575 | 20130731
          Length = 628

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/576 (36%), Positives = 327/576 (56%), Gaps = 11/576 (1%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD--GIFCKDMVSWTGMVGCYAEN 224
           +H  + K G  A     TS+I+ YS C  ++ A +VF+      K++ ++  ++  +  N
Sbjct: 51  LHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSN 110

Query: 225 CFYEESLQLFCQMRVMGYR-PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
              + S  L+ QMR++G   P+ +T    +++C         K +HG   K   + D++V
Sbjct: 111 GLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFV 170

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
           G+ L+  Y K   +VDA   FEE+P +DV+ W+ M+  YAQ    +EAL +F  M ++ V
Sbjct: 171 GSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGV 230

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
           VP  +T   VL   +       G+ +H  + K+G  S+V V NAL+D+Y KC    +++ 
Sbjct: 231 VPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALN 290

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           +F    E++  +WN++I  + + GD    + LF  M+GN +QP  VT ++VL AC   AA
Sbjct: 291 VFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAA 350

Query: 464 LDPGLQVHSLTI-----KTRYNND---IAVANALIDMYAKCGRINDARLTFDKMDKREEV 515
           L  G ++H   I     K   NND   + + NAL+DMYAKCG + DAR+ FD M +++  
Sbjct: 351 LMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVA 410

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           SWN MI GY MHG   EAL+ F +M+Q    PN+++FVG+LSACS+AG++ +G      M
Sbjct: 411 SWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEM 470

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDL 635
              Y + P +EHYTC++ +L R GK  EA  L+  +PF+   + WRALL AC + K+ DL
Sbjct: 471 DSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPVGWRALLAACRIYKDTDL 530

Query: 636 GRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQG 695
               A  V+E++P   G +VL+SN+Y V  R++ V+ +R  M+++ VKK PG SW+E   
Sbjct: 531 AEIAASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMRQQNVKKRPGCSWIELMN 590

Query: 696 VVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
            VH F  GD +HP    I A L  L    ++ GYVP
Sbjct: 591 GVHVFLTGDRTHPQTDFIYAGLNSLTAVLQEQGYVP 626



 Score =  189 bits (479), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 237/486 (48%), Gaps = 17/486 (3%)

Query: 51  LQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPL--- 107
           LQQ  Q  +   GKQLH  +LK G      A   ++N Y +   ++ A K+F+  P    
Sbjct: 36  LQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFN-YPTHHD 94

Query: 108 TNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEV-NPFVCTTIIKLLVSMDLPHVCWT 166
            N  ++  +  G   +    H+  +  ++   G  + + F    +I+             
Sbjct: 95  KNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKK 154

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IH  ++K G + D FVG++L+  Y     V  A +VF+ +  +D+V W  MV  YA+   
Sbjct: 155 IHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGC 214

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           +EE+L +F +M   G  P  YT+T  L     +  F  G++VHG   K  Y   + V   
Sbjct: 215 FEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNA 274

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+++Y K     DA   FE M +KD+  W+ +I+ + +       L+LF  M  + V P+
Sbjct: 275 LIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPD 334

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS--------NVFVSNALMDVYAKCGEI 398
             T  +VL AC     L+ G++IH  ++  GL          +V ++NALMD+YAKCG +
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSM 394

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC 458
            ++ ++F    E++  +WN MI GY   G G++A++ F+ M    + P E++F  +L AC
Sbjct: 395 RDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSAC 454

Query: 459 AGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDAR-LTFDKMDKREEV 515
           +    +  GL+  +  + ++Y    +V +   +IDM  + G++ +A  L      K + V
Sbjct: 455 SHAGMVKEGLEFLA-EMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPV 513

Query: 516 SWNAMI 521
            W A++
Sbjct: 514 GWRALL 519



 Score =  161 bits (407), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 5/332 (1%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           T   +L+ C        GK +H   LK  +       T ++ +Y+K   +++  L     
Sbjct: 31  TCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKC-TLINYALKVFNY 89

Query: 308 PK---KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV-PNNFTFASVLQACAAQVLL 363
           P    K+V  ++ +IA +  +  S+ +  L+  MR   VV P+ FTF  V++AC     +
Sbjct: 90  PTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDV 149

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
              K+IH  + K GL+ +VFV +AL+  Y K   + ++  +F E P ++ V WN+M+ GY
Sbjct: 150 FEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGY 209

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            Q+G  E+A+ +F  M+ N + P   T + VL   +     D G  VH    K  Y++ +
Sbjct: 210 AQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSV 269

Query: 484 AVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT 543
            V NALIDMY KC   +DA   F+ MD+++  SWN++I  +   G     L LF++M   
Sbjct: 270 VVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGN 329

Query: 544 NCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
             +P+ +T   VL AC++   L  G+ +   M
Sbjct: 330 KVQPDLVTVTTVLPACTHLAALMHGREIHGYM 361



 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 6/252 (2%)

Query: 329 KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL 388
           ++ +  FHC   S  +    T  + LQ CA    L  GKQ+H+++LK G  ++     ++
Sbjct: 14  QQQIRSFHCYSASYDIG---TCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSI 70

Query: 389 MDVYAKCGEIENSMILFMESP--EQNEVTWNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQ 445
           +++Y+KC  I  ++ +F      ++N   +N +I G+V  G  + +  L+  M +   + 
Sbjct: 71  INMYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVI 130

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLT 505
           P + TF  V+RAC     +    ++H L  K     D+ V +AL+  Y K   + DA   
Sbjct: 131 PDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEV 190

Query: 506 FDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLL 565
           F+++  R+ V WN+M+ GY+  G   EAL +F +M +    P + T  GVLS  S  G  
Sbjct: 191 FEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDF 250

Query: 566 DKGQSLFKSMSQ 577
           D GQ++   +++
Sbjct: 251 DNGQAVHGFLTK 262


>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
           | HC | chr1:38304139-38306748 | 20130731
          Length = 739

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/648 (32%), Positives = 360/648 (55%), Gaps = 2/648 (0%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           L+N YV F     A   F ++P  + +++  + +    S+ F  ++     + + G   +
Sbjct: 76  LVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPD 135

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD 204
            +    ++K   S+    +   ++  +     +A+ FV  +LID +  C +++ AR+VFD
Sbjct: 136 NYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFD 195

Query: 205 GIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGL-EAFG 263
            +  +D+ +WT ++     N  ++E++ LF +MR+ G + ++  + + L  C  L E   
Sbjct: 196 EMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLK 255

Query: 264 VGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYA 323
           +G ++HGCAL++ +D DLYV   ++++Y K G   +A L F  M  +D++ WS +IA Y+
Sbjct: 256 LGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYS 315

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
           Q+   KE+ EL+  M    +  N    ++VL A     L   GK++H+ VLK GL ++V 
Sbjct: 316 QNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVV 375

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
           V +AL+D+YA CG I+ +  +F    + + + WN++I GY  +GD + A   F  +   +
Sbjct: 376 VGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAE 435

Query: 444 MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDAR 503
            +P  +T  SVL  C    AL  G ++H    ++    +I+V N+LIDMY+KCG +    
Sbjct: 436 HRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGV 495

Query: 504 LTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAG 563
             F++M  +  +++N MI     HGL  + L  + +M +   KPNK+TF+ +LSACS+AG
Sbjct: 496 KVFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAG 555

Query: 564 LLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRAL 623
           L+D+G  L+ SM  DY I+P +EHY+CMV L+GR G  D A K I  +P  P   V  +L
Sbjct: 556 LVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANVLGSL 615

Query: 624 LGACVVQKNIDLG-RFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGV 682
           LGAC +   ++L  +  A+H+ ++   D G +VLLSN+YA  KRW++++ VR  +K KG+
Sbjct: 616 LGACRLHNKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKDKGL 675

Query: 683 KKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYV 730
           +K+PG SW++    +  F      +P+   I   L+ L    ++  Y+
Sbjct: 676 EKKPGSSWIQVGHSIFVFHATSIFYPELAKIEETLDSLFLVMKNEDYI 723



 Score =  216 bits (551), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 239/462 (51%), Gaps = 2/462 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+++Y  +L+     +    G+ ++ +IL      +LF    L++ +V+ + L+DA K+F
Sbjct: 135 DNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVF 194

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS-MDLP 161
           DEM + +  ++  L  G   + ++D A+ +  ++  EG + +  +  +++ +    M+  
Sbjct: 195 DEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGL 254

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +   +H C  + G  +D +V  ++ID Y  CG  D A  VF  +  +D+VSW+ ++  Y
Sbjct: 255 KLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGY 314

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           ++N  Y+ES +L+ +M  MG   N   ++  L +   L+ F  GK +H   LK     D+
Sbjct: 315 SQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDV 374

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            VG+ L+++YA  G I +A+  F  M   D++ W+ +IA Y      + A   F  +  +
Sbjct: 375 VVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVA 434

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              PN+ T  SVL  C     L  GK+IH    + GL  N+ V N+L+D+Y+KCG +E  
Sbjct: 435 EHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELG 494

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
           + +F +   +N +T+NTMI      G GEK +  +  M    M+P +VTF S+L AC+  
Sbjct: 495 VKVFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHA 554

Query: 462 AALDPG-LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
             +D G L  +S+        D+   + ++D+  + G ++ A
Sbjct: 555 GLVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGA 596



 Score =  160 bits (404), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 176/343 (51%), Gaps = 3/343 (0%)

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           + L+  Y   G    A LFF ++P K  + W+ ++     S+    +++ +H M +    
Sbjct: 74  SHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFA 133

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           P+N+T+  VL+AC++   + +G+ ++ N+L     +N+FV  AL+D++ KC  +E++  +
Sbjct: 134 PDNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKV 193

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF-AA 463
           F E   ++  TW  +I G V  G+ ++A+ LF  M    ++   V  +SVL  C      
Sbjct: 194 FDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEG 253

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           L  G+ +H   +++ +++D+ V+NA+IDMY KCG  ++A L F  M  R+ VSW+ +I G
Sbjct: 254 LKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAG 313

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           YS +G+  E+  L+ +M       N++    VL A     L  +G+ +   + +   +  
Sbjct: 314 YSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTD 373

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            +   + +V +    G   EA  +   +     +MVW +L+  
Sbjct: 374 VVVG-SALVDMYANCGSIKEAESIFRNM-LDMDIMVWNSLIAG 414


>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:35446469-35444694 | 20130731
          Length = 591

 Score =  392 bits (1006), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/529 (38%), Positives = 315/529 (59%), Gaps = 2/529 (0%)

Query: 294 SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASV 353
           +G I   +  F  +   D   ++ +I   +Q   S + +  +  M  S   P+++TF SV
Sbjct: 63  AGSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSV 122

Query: 354 LQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNE 413
            +ACA    L +G  +HS+V   G  SN FV  A++  YAK   +  +  +F + P+++ 
Sbjct: 123 FKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSV 182

Query: 414 VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSL 473
           V WNTMI GY   G   +AM LF  M    + P   TF SV  AC+   +L+ G  V+  
Sbjct: 183 VAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDS 242

Query: 474 TIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEA 533
            +      ++ +  +LI+M+++CG +  AR  FD + +   ++W AMI GY MHG   EA
Sbjct: 243 IVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEA 302

Query: 534 LNLFNKMQ-QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           + LF +M+ +    PN +TFV VLSAC++AGL+ +G+ +F SM ++Y + P +EH+ CMV
Sbjct: 303 MELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLEHHVCMV 362

Query: 593 GLLGRLGKFDEAVKLIGEI-PFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDD 651
            +LG+ G   EA + I E+ P +    VW A+LGAC + KN DLG   AQH++ ++P + 
Sbjct: 363 DMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLGVEAAQHLISLEPENP 422

Query: 652 GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNK 711
             +VLLSNMYA+A R D V SVR  M ++G+KK+ G S ++     + F +GD +HP+  
Sbjct: 423 SNYVLLSNMYALAGRMDRVESVRNVMIQRGIKKQAGYSSIDVNNKTYLFRMGDKAHPETN 482

Query: 712 LICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSI 771
            I   L+ L  + ++AGY P   + + ++E++E+E  L  HSE+LA+AFGL++     ++
Sbjct: 483 EIYQYLDGLIWRCKEAGYAPIPESAMHELEEEEREYALRHHSEKLAVAFGLMKTSHGTAL 542

Query: 772 RILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           +I+KNLRIC DCH+ IK IS V  REI++RD  RFHHF+ G CSC DYW
Sbjct: 543 KIVKNLRICEDCHSAIKFISVVTNREIIIRDKLRFHHFREGSCSCLDYW 591



 Score =  160 bits (404), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 195/392 (49%), Gaps = 13/392 (3%)

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAAL 253
           G++   R++F  +   D   +  ++   +++ F  +++  + +M    ++P++YT T+  
Sbjct: 64  GSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVF 123

Query: 254 KSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVI 313
           K+C  L A  +G  +H     + +  + +V   ++  YAKS  +  A+  F++MP++ V+
Sbjct: 124 KACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVV 183

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI+ Y  +  + EA+ LF  M +  V P++ TF SV  AC+    L LG  ++ ++
Sbjct: 184 AWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSI 243

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           +  G+  NV +  +L++++++CG++  +  +F    E N + W  MI GY   G G +AM
Sbjct: 244 VSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAM 303

Query: 434 NLFSSMIG-NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALI 490
            LF  M     + P  VTF +VL ACA    +  G QV + +++  Y     + +   ++
Sbjct: 304 ELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFA-SMREEYGLVPGLEHHVCMV 362

Query: 491 DMYAKCGRINDARLTFDKMDKREEVS--WNAMICGYSMHG---LSTEALNLFNKMQQTNC 545
           DM  K G + +A     ++   E V   W AM+    MH    L  EA      ++  N 
Sbjct: 363 DMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLGVEAAQHLISLEPEN- 421

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
            P+    +  + A   AG +D+ +S+   M Q
Sbjct: 422 -PSNYVLLSNMYAL--AGRMDRVESVRNVMIQ 450



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 162/330 (49%), Gaps = 14/330 (4%)

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFD-HALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
           +LF  +   ++  F +L +  S+ H F    +    R+    H+ + +  T++ K    +
Sbjct: 71  RLFLSVTDPDSFLFNSLIKASSQ-HGFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHL 129

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
               +   +H+ V+  G  +++FV  +++  Y+    +  AR+VFD +  + +V+W  M+
Sbjct: 130 SALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMI 189

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
             Y  N    E++ LF +M  MG  P++ T  +   +C  + +  +G  V+   +     
Sbjct: 190 SGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIR 249

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
            ++ +GT L+ ++++ GD+  A+  F+ + + +VI W+ MI+ Y       EA+ELF+ M
Sbjct: 250 VNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEM 309

Query: 339 -RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV-----LKVGLDSNVFVSNALMDVY 392
            ++  +VPN  TF +VL ACA   L+  G+Q+ +++     L  GL+ +V     ++D+ 
Sbjct: 310 KKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLEHHV----CMVDML 365

Query: 393 AKCGEIENSMILFME--SPEQNEVTWNTMI 420
            K G +  +     E    E     W  M+
Sbjct: 366 GKAGLLTEAYQFIKELCPVEHVPAVWTAML 395



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 131/258 (50%), Gaps = 2/258 (0%)

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           +Q H++++  G   +  +   L+ + +  G I  +  LF+   + +   +N++I    Q 
Sbjct: 35  QQAHAHLIVSGRHRSRALLTKLLTLSSAAGSIAYTRRLFLSVTDPDSFLFNSLIKASSQH 94

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
           G     +  +  M+ +  +P+  TF+SV +ACA  +AL  G  +HS    + + ++  V 
Sbjct: 95  GFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHLSALKIGTILHSHVFVSGFGSNSFVQ 154

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
            A++  YAK   +  AR  FDKM +R  V+WN MI GY  +GL+ EA+ LF KM +    
Sbjct: 155 AAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVC 214

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
           P+  TFV V SACS  G L+ G  ++ S+  +  I   +   T ++ +  R G    A  
Sbjct: 215 PDSATFVSVSSACSQIGSLELGCWVYDSIVSN-GIRVNVILGTSLINMFSRCGDVRRARA 273

Query: 607 LIGEIPFQPSVMVWRALL 624
           +   I  + +V+ W A++
Sbjct: 274 VFDSIS-EGNVIAWTAMI 290



 Score = 94.7 bits (234), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 148/312 (47%), Gaps = 21/312 (6%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G  LH  +   G   + F    ++ FY +   L  A K+FD+MP  + +++ T+  G   
Sbjct: 135 GTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEH 194

Query: 123 SHQFDHALHVILRLFKEG--HEVNPFV-CTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
           +   + A+ +  ++ + G   +   FV  ++    + S++L   CW ++  +   G + +
Sbjct: 195 NGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELG--CW-VYDSIVSNGIRVN 251

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
             +GTSLI+ +S CG+V  AR VFD I   ++++WT M+  Y  + +  E+++LF +M+ 
Sbjct: 252 VILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKK 311

Query: 240 -MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE----LLELYAKS 294
             G  PN  T  A L +C        G+ V     +   +  L  G E    ++++  K+
Sbjct: 312 ERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMRE---EYGLVPGLEHHVCMVDMLGKA 368

Query: 295 GDIVDAQLFFEEMPKKDVIP--WSLMIAR---YAQSDRSKEALELFHCMRQSSVVPNNFT 349
           G + +A  F +E+   + +P  W+ M+     +   D   EA +  H +      P+N+ 
Sbjct: 369 GLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLGVEAAQ--HLISLEPENPSNYV 426

Query: 350 FASVLQACAAQV 361
             S + A A ++
Sbjct: 427 LLSNMYALAGRM 438


>Medtr4g082470.1 | PPR containing plant-like protein | HC |
           chr4:32162319-32165367 | 20130731
          Length = 700

 Score =  391 bits (1004), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/642 (35%), Positives = 341/642 (53%), Gaps = 12/642 (1%)

Query: 58  RHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLA 117
           +HP   K LH  ++  G P D      L++ Y  F  L  A  LF  +P     SF  + 
Sbjct: 51  KHPTTVKTLHASLIISGHPPD----TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLII 106

Query: 118 QGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQ 177
           +    +    H +             N  V  +I+    S     V  T   C   + + 
Sbjct: 107 RWHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNA 166

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
           AD+FV TSL+DAYS CG +  AR+VFD I  + +VSWT M+  Y +N   EE L LF +M
Sbjct: 167 ADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM 226

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
           R      N +T+ + + +C  L     GK VHG  +K   + + Y+ T LL +Y K GDI
Sbjct: 227 REGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDI 286

Query: 298 VDAQLFFEEMP------KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFA 351
            DA+  F+E          D++ W+ MI  Y Q    + ALELF   +   ++PN+ T A
Sbjct: 287 GDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLA 346

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
           S+L ACA    +++GK +H  V+K GLD +  + N+L+D+YAKCG I ++  +F  + ++
Sbjct: 347 SLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDK 405

Query: 412 NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVH 471
           + V+WN++I GY Q G   +A++LF+ M      P  VT   VL ACA   A   GL +H
Sbjct: 406 DVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLH 465

Query: 472 SLTIKTRY-NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLS 530
              +K    ++ I V  AL++ YAKCG    AR+ FD M ++  V+W AMI G  M G  
Sbjct: 466 GFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDG 525

Query: 531 TEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTC 590
             +L LF  M +    PN++ F  +L+ACS++G++++G  +F  M ++ N  P ++HY C
Sbjct: 526 VGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYAC 585

Query: 591 MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHD 650
           MV LL R G   EA+  I ++P QP V V+ A L  C +  N D G    + +LE+ P  
Sbjct: 586 MVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQ 645

Query: 651 DGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
              +VL+SN+YA   RW  V  VR+ +K++G+ K PG+S VE
Sbjct: 646 ACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVE 687



 Score =  234 bits (597), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 253/490 (51%), Gaps = 11/490 (2%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           ++ LL+ A Q R      +LHC+ILK  A  D F    L++ Y +   L DA K+FDE+P
Sbjct: 138 FSILLKTASQLRDIVLTTKLHCNILKSNAA-DSFVLTSLVDAYSKCGKLRDARKVFDEIP 196

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWT 166
             + +S+ ++     ++   +  L +  R+ +   + N F   +++     +   H    
Sbjct: 197 DRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKW 256

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK------DMVSWTGMVGC 220
           +H  V K G + ++++ TSL++ Y  CG++  AR VFD           D+V WT M+  
Sbjct: 257 VHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVG 316

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y +  + + +L+LF   +     PN+ T+ + L +C  LE   +GK +H   +K   D D
Sbjct: 317 YTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-D 375

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
             +   L+++YAK G I DA   F     KDV+ W+ +I+ YAQS  + EAL+LF+ MR 
Sbjct: 376 TSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRM 435

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL-DSNVFVSNALMDVYAKCGEIE 399
            S +P+  T   VL ACA+     +G  +H   LK GL  S+++V  AL++ YAKCG+  
Sbjct: 436 ESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDAT 495

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           ++ ++F    E+N VTW  MI G    GDG  ++ LF  M+  ++ P EV F+++L AC+
Sbjct: 496 SARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACS 555

Query: 460 GFAALDPGLQVHSLTIKT-RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-W 517
               ++ GL +     K   +   +     ++D+ A+ G + +A    DKM  +  V  +
Sbjct: 556 HSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVF 615

Query: 518 NAMICGYSMH 527
            A + G  +H
Sbjct: 616 GAFLHGCGLH 625


>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38635968-38632937 | 20130731
          Length = 694

 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/592 (35%), Positives = 329/592 (55%), Gaps = 54/592 (9%)

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           ++SC+   +  +GK +H     + Y  D ++   LL  Y+K G++ +A   F+ MP+++ 
Sbjct: 85  IQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNY 144

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSV----------------------------- 343
           +  ++MI  Y +    + A  LF  M + +V                             
Sbjct: 145 MSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLFSRMNVLG 204

Query: 344 -VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
            VP+ ++F SVL+ CA           H   L VG    + + N         GE    +
Sbjct: 205 FVPDEYSFGSVLRGCA-----------HLRALSVGDRFTLMLRNV--------GE---RI 242

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
           I +M  P  N V WNT++ G  Q    +  ++ +  M     +P  +TF SV+ +C+  A
Sbjct: 243 IKWM--PNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELA 300

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            L  G Q+H+  IK   ++ + V ++L+ MY+KCG + D+   F + ++R+ V W++MI 
Sbjct: 301 TLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIA 360

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
            Y  HG   +A+ LFN  ++ N   N++TF+ +L ACS++GL DKG   F  M + Y ++
Sbjct: 361 AYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLK 420

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH 642
             +EHYTC+V LLGR G  +EA  +I  +P     ++W+ LL AC + KN ++ R  A+ 
Sbjct: 421 ARLEHYTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEE 480

Query: 643 VLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSV 702
           VL + P D  ++VL++ ++A AKRW NV+ VR+ MK K VKKEPG+SWVE +  VH F +
Sbjct: 481 VLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHM 540

Query: 703 GDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGL 762
           GD SH     I   LE L  + +  GYVPD ++VL D++++EKE +L  HSE+LA+AF L
Sbjct: 541 GDESHSKFVEINQYLEELTSEMKMQGYVPDISSVLHDMDNEEKEYNLTHHSEKLAIAFAL 600

Query: 763 LRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVC 814
           + IP    IR++KN+R+C DCH  IK ISE+   EI+VRD +RFHHF++G C
Sbjct: 601 MTIPKGEPIRVMKNMRVCGDCHVAIKYISEIKNLEIIVRDSSRFHHFKNGRC 652



 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 194/441 (43%), Gaps = 63/441 (14%)

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
           CS+ H     +      F  G    P + + +I+  +  +   +   +H+ ++  G+ +D
Sbjct: 58  CSKGH-----IKKAFESFLYGIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGYSSD 112

Query: 180 AFVGTSL-------------------------------IDAYSVCGNVDAARQVFDGIFC 208
            F+   L                               I AY   GN++ A+ +FD +  
Sbjct: 113 KFISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTE 172

Query: 209 KDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSV 268
           +++ +W  MV    +    EE+L LF +M V+G+ P+ Y+  + L+ C  L A       
Sbjct: 173 RNVATWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRA------- 224

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS 328
                       L VG     +    G+ +      + MP  +++ W+ ++A  AQ+   
Sbjct: 225 ------------LSVGDRFTLMLRNVGERI-----IKWMPNCNLVAWNTLMAGKAQNRCF 267

Query: 329 KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL 388
              L+ +  M+ +   P+  TF SV+ +C+    L  GKQIH+ V+K G  S V V ++L
Sbjct: 268 DGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVTVISSL 327

Query: 389 MDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTE 448
           + +Y+KCG +++S+  F+E  E++ V W++MI  Y   G  EKA+ LF+     +M   E
Sbjct: 328 VSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNE 387

Query: 449 VTFSSVLRACAGFAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFD 507
           VTF S+L AC+     D GL    + + K      +     ++D+  + G + +A     
Sbjct: 388 VTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIR 447

Query: 508 KMD-KREEVSWNAMICGYSMH 527
            M    + + W  ++    +H
Sbjct: 448 SMPVSADAIIWKTLLSACKIH 468



 Score =  130 bits (327), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 179/391 (45%), Gaps = 26/391 (6%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           ++ L+Q  I     + GKQLH  I   G   D F  N LLNFY +F  L++A KLFD MP
Sbjct: 81  FSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 140

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWT 166
             N +S   + +        ++A +    LF E  E N      ++  LV   L      
Sbjct: 141 RRNYMSCNIMIKAYLEMGNIENAKN----LFDEMTERNVATWNAMVTGLVKFGLNE---- 192

Query: 167 IHACVYKR----GHQADAFV------GTSLIDAYSVCGNV-----DAARQVFDGIFCKDM 211
             A ++ R    G   D +       G + + A SV         +   ++   +   ++
Sbjct: 193 -EALLFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERIIKWMPNCNL 251

Query: 212 VSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGC 271
           V+W  ++   A+N  ++  L  +C M++ GYRP+  T  + + SC  L     GK +H  
Sbjct: 252 VAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAE 311

Query: 272 ALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEA 331
            +KA     + V + L+ +Y+K G + D+   F E  ++DV+ WS MIA Y    + ++A
Sbjct: 312 VIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKA 371

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMD 390
           ++LF+   + ++  N  TF S+L AC+   L   G      ++ K GL + +     ++D
Sbjct: 372 IKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVD 431

Query: 391 VYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
           +  + G +E +  +    P   + + W T++
Sbjct: 432 LLGRSGCLEEAETIIRSMPVSADAIIWKTLL 462



 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 56/307 (18%)

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           F+ ++Q+C     + LGKQ+HS +   G  S+ F+SN L++ Y+K GE+ N++ LF   P
Sbjct: 81  FSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 140

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ------------------------ 445
            +N ++ N MI  Y+++G+ E A NLF  M   ++                         
Sbjct: 141 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLFSRM 200

Query: 446 ------PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRI 499
                 P E +F SVLR CA   AL  G      T+  R      V   +I     C   
Sbjct: 201 NVLGFVPDEYSFGSVLRGCAHLRALSVG---DRFTLMLR-----NVGERIIKWMPNCNL- 251

Query: 500 NDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSAC 559
                          V+WN ++ G + +      L+ +  M+    +P+++TFV V+S+C
Sbjct: 252 ---------------VAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSC 296

Query: 560 SNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMV 619
           S    L +G+ +   + +       +   + +V +  + G   +++K   E   +  V++
Sbjct: 297 SELATLCQGKQIHAEVIKA-GASSVVTVISSLVSMYSKCGSLQDSIKAFLECE-ERDVVL 354

Query: 620 WRALLGA 626
           W +++ A
Sbjct: 355 WSSMIAA 361



 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 18/233 (7%)

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
             ++   MP  N +++ TL  G +++  FD  L     +   G+  +     ++I     
Sbjct: 239 GERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVIS--SC 296

Query: 158 MDLPHVCW--TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
            +L  +C    IHA V K G  +   V +SL+  YS CG++  + + F     +D+V W+
Sbjct: 297 SELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWS 356

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC-------LGLEAFGVGKSV 268
            M+  Y  +   E++++LF          N  T  + L +C        GL+ F +    
Sbjct: 357 SMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEK 416

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
           +G  LKA  +      T +++L  +SG + +A+     MP   D I W  +++
Sbjct: 417 YG--LKARLEH----YTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLS 463


>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:17991225-17993175 | 20130731
          Length = 586

 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/560 (35%), Positives = 320/560 (57%), Gaps = 21/560 (3%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKS---GDIVDAQLFFEEMPKKDVIPWSLMIARY 322
           K +    +K  Y  +  V T+ +     +     +  A   F+++ + +++ ++ M   Y
Sbjct: 43  KQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGY 102

Query: 323 AQ-SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
           A+ +D  +       C+R            S ++A A       GKQ+H   +K+G+  N
Sbjct: 103 ARLNDPLRMITHFRRCLR----------LVSKVKALAE------GKQLHCFAVKLGVSDN 146

Query: 382 VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
           ++V   L+++Y  CG+I+ S  +F +  E   V +N +I+   +     +A+ LF  +  
Sbjct: 147 MYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQE 206

Query: 442 NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIND 501
             ++PT+VT   VL +CA   +LD G  +H    K  ++  + V   LIDMYAKCG ++D
Sbjct: 207 IGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDD 266

Query: 502 ARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           A   F  M KR+  +W+A+I  Y+ HG   +A+++ N+M++   +P+++TF+G+L ACS+
Sbjct: 267 AVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSH 326

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
            GL+++G   F  M+ +Y I P I+HY CMV LLGR G+ DEA K I E+P +P+ ++WR
Sbjct: 327 NGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWR 386

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
            LL AC    N+++G+   + + E+     G +V+ SN+ A   +WD+V  +RK M  KG
Sbjct: 387 TLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKG 446

Query: 682 VKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLL-DV 740
             K PG S +E   VVH F  G+  H  +  +   L+ L K+ + AGYVPD + V   D+
Sbjct: 447 AVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADM 506

Query: 741 EDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVV 800
           ED+EKE  L  HSE+LA+ FGLL  P   +IR++KNLR+C DCH   K IS +  R+I++
Sbjct: 507 EDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIIL 566

Query: 801 RDINRFHHFQHGVCSCGDYW 820
           RD+ RFHHF+ G CSCGDYW
Sbjct: 567 RDVQRFHHFKDGKCSCGDYW 586



 Score =  152 bits (385), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 20/367 (5%)

Query: 167 IHACVYKRGHQADAFVGTSLID---AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
           I A   K  +Q +  V T  I+   +     +++ A Q+FD I   ++V +  M   YA 
Sbjct: 45  IQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYAR 104

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
                + L++    R              L+    ++A   GK +H  A+K     ++YV
Sbjct: 105 ---LNDPLRMITHFR------------RCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYV 149

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
              L+ +Y   GDI  ++  F+++ +  V+ ++ +I   A+++R+ EAL LF  +++  +
Sbjct: 150 VPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGL 209

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            P + T   VL +CA    L LG+ +H  V K G D  V V+  L+D+YAKCG +++++ 
Sbjct: 210 KPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVN 269

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           +F + P+++   W+ +IV Y   GDG +A+++ + M    +QP E+TF  +L AC+    
Sbjct: 270 VFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGL 329

Query: 464 LDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMI 521
           ++ G +  H +T +      I     ++D+  + GR+++A    D++  K   + W  ++
Sbjct: 330 VEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLL 389

Query: 522 CGYSMHG 528
              S HG
Sbjct: 390 SACSTHG 396



 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 171/340 (50%), Gaps = 22/340 (6%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL 154
           ++ A +LFD++   N + F T+A+G +R       L+  LR+    H        + +K 
Sbjct: 77  MEHAHQLFDQITQPNIVLFNTMARGYAR-------LNDPLRMIT--HFRRCLRLVSKVKA 127

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
           L      H C+ +     K G   + +V  +LI+ Y+ CG++DA+R+VFD I    +V++
Sbjct: 128 LAEGKQLH-CFAV-----KLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAY 181

Query: 215 TGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
             ++   A N    E+L LF +++ +G +P + T+   L SC  L +  +G+ +H    K
Sbjct: 182 NAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKK 241

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
             +D+ + V T L+++YAK G + DA   F +MPK+D   WS +I  YA      +A+ +
Sbjct: 242 YGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISM 301

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILG-KQIHSNVLKVGLDSNVFVSNALMDVYA 393
            + M++  V P+  TF  +L AC+   L+  G +  H    + G+  ++     ++D+  
Sbjct: 302 LNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLG 361

Query: 394 KCGEIENSMILFMESP-EQNEVTWNTMIV-----GYVQLG 427
           + G ++ +     E P +   + W T++      G V++G
Sbjct: 362 RAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMG 401



 Score = 80.5 bits (197), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 38/278 (13%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GKQLHC  +K G   +++    L+N Y     +D + ++FD++     +++  +    +R
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190

Query: 123 SHQFDHALHVILRLFKEG---HEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
           +++ + AL +   L + G    +V   V  +   LL S+DL    W +H  V K G    
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGR--W-MHEYVKKYGFDRY 247

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
             V T+LID Y+ CG++D A  VF  +  +D  +W+ ++  YA +    +++ +  +M+ 
Sbjct: 248 VKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKK 307

Query: 240 MGYRPNNYTITAALKSCL-------GLEAF-------GVGKSV--HGCALKACYDQDLYV 283
              +P+  T    L +C        G E F       G+  S+  +GC            
Sbjct: 308 EKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGC------------ 355

Query: 284 GTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
              +++L  ++G + +A  F +E+P K   I W  +++
Sbjct: 356 ---MVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLS 390


>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:11375774-11372564 | 20130731
          Length = 938

 Score =  386 bits (992), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/673 (32%), Positives = 373/673 (55%), Gaps = 22/673 (3%)

Query: 66  LHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFD-----EMPLTNTISFVTLAQGC 120
           +H + +K G    ++  + L+N Y + + L DA K+FD      + + NTI  V    GC
Sbjct: 264 VHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGC 323

Query: 121 SRSHQFDHALHVILRLFKE----GHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGH 176
                    L  ++ LF E    G++ + F  ++I+      D   +   +H+ + K+  
Sbjct: 324 ---------LSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRF 374

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
             +  V  +L+D Y+  G +  AR+ F+ +  +D +SW  ++  Y +     E+  +F +
Sbjct: 375 TDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRR 434

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           M   G  P+   + + L +C  ++    G   HG ++K   D +L+ G+ L+++Y+K G 
Sbjct: 435 MNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGG 494

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
           I DA+  +  MP+  V+  + +IA YA  D +KEA+ L H M+   + P+  TFAS++  
Sbjct: 495 IEDARKIYSCMPEWSVVSMNALIAGYAIKD-TKEAINLLHEMQILGLKPSEITFASLIDC 553

Query: 357 CAAQVLLILGKQIHSNVLKVGLD-SNVFVSNALMDVYAKCGEIENSMILFME-SPEQNEV 414
           C     +ILG QIH  +LK GL   + F+  +L+ +Y    ++    ILF E S  ++ V
Sbjct: 554 CKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIV 613

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
            W  +I G+ Q    ++A+NL+  M  N++ P + TF +VLRACA  ++L  G ++HSL 
Sbjct: 614 LWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLI 673

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHGLSTEA 533
             T ++ D   ++AL+DMYAKCG +  A   F+++  K++ +SWN+MI G++ +G +  A
Sbjct: 674 FHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERA 733

Query: 534 LNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVG 593
           L +F++M  ++  P+ +TF+GVL+ACS+AGL+ +G+ +F +M   Y+I P ++H+ CMV 
Sbjct: 734 LKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHHACMVD 793

Query: 594 LLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGT 653
           LLGR G  +EA + I ++  +P+ M+W  LLGAC +  +   G   A+ ++E++P +   
Sbjct: 794 LLGRCGFLEEAEEFIDKLDVEPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEPQNSSP 853

Query: 654 HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLI 713
           +VLL NM+A +  WD   S+R+ M +  V+K PG SW+      + F   D SHP +  I
Sbjct: 854 YVLLYNMHAGSGHWDEAKSLRRTMVQNEVQKTPGCSWIVVDKTTNLFVASDMSHPSSDEI 913

Query: 714 CAMLEWLNKKTRD 726
              L+ L    RD
Sbjct: 914 SHALKHLAALMRD 926



 Score =  259 bits (662), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 301/587 (51%), Gaps = 8/587 (1%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD+ ++ AL+   ++    +   QL  D ++ G  LD      +LN  V    LD A +L
Sbjct: 139 LDTATFTALIGGYVRVGMFDDALQLF-DEMQSGFVLDELVIVTVLNACVNLGKLDHACEL 197

Query: 102 FDEMP-LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           FDEM    N +++  +  G  +      A+    ++   G   +     +++  +  +  
Sbjct: 198 FDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGD 257

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
                 +H    K G ++  +V +SLI+ Y  C  +  A++VFD +  +++V W  ++G 
Sbjct: 258 LGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGV 317

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           YA+N    + ++LF +M   G  P+ +T ++ L SC   +   +G+ +H   +K  +  +
Sbjct: 318 YAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDN 377

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           L V   L+++YAK+G + +A+  FE M  +D I W+ ++  Y Q +   EA  +F  M +
Sbjct: 378 LCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNR 437

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
             VVP+    AS+L AC    +L  G Q H   +K+GLD+N+F  ++L+D+Y+KCG IE+
Sbjct: 438 HGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIED 497

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  ++   PE + V+ N +I GY  + D ++A+NL   M    ++P+E+TF+S++  C  
Sbjct: 498 ARKIYSCMPEWSVVSMNALIAGYA-IKDTKEAINLLHEMQILGLKPSEITFASLIDCCKE 556

Query: 461 FAALDPGLQVHSLTIKTR-YNNDIAVANALIDMYAKCGRINDARLTFDKMDK-REEVSWN 518
              +  G+Q+H   +K         +  +L+ MY    ++ +  + F ++   +  V W 
Sbjct: 557 SPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWT 616

Query: 519 AMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM-SQ 577
           A+I G++ +  S +ALNL+ +M+  N  P++ TFV VL AC+    L  GQ +   +   
Sbjct: 617 ALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHT 676

Query: 578 DYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
            ++++      + +V +  + G    A K+  E+P +  V+ W +++
Sbjct: 677 GFDLDELTS--SALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMI 721



 Score =  253 bits (647), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 295/588 (50%), Gaps = 45/588 (7%)

Query: 45  HSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           +S++  L    +  +   G  +H  I+K G   D      L++FY +  CL+ A  LF+ 
Sbjct: 73  NSFSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNS 132

Query: 105 MPL---TNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DL 160
           +      +T +F  L  G  R   FD AL +   + + G  ++  V  T++   V++  L
Sbjct: 133 VSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEM-QSGFVLDELVIVTVLNACVNLGKL 191

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            H C                     L D    CGNV               V+W  M+  
Sbjct: 192 DHAC--------------------ELFDEMDGCGNV---------------VAWNVMISG 216

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           + +  +++E+++ + +MR+ G   +  T+ + L +  GL   G G  VHG A+K  ++  
Sbjct: 217 HGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVKLGFESS 276

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           +YV + L+ +Y K   + DA+  F+ +  ++V+ W+ ++  YAQ+    + +ELF  M  
Sbjct: 277 VYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMG 336

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
               P+ FT++S+L +CA    L +G+Q+HS ++K     N+ V+NAL+D+YAK G ++ 
Sbjct: 337 CGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKE 396

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +   F     ++ ++WN ++VGYVQ  +  +A N+F  M  + + P EV  +S+L AC  
Sbjct: 397 ARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGN 456

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
              L+ GLQ H L++K   + ++   ++LIDMY+KCG I DAR  +  M +   VS NA+
Sbjct: 457 IKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNAL 516

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           I GY++   + EA+NL ++MQ    KP+++TF  ++  C  +  +  G  +  ++ +  N
Sbjct: 517 IAGYAIKD-TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILK--N 573

Query: 581 IEPCIEHY--TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
              C   +  T ++G+     K  E   L  E+    S+++W AL+  
Sbjct: 574 GLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISG 621


>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:452191-449631 | 20130731
          Length = 827

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 242/797 (30%), Positives = 381/797 (47%), Gaps = 119/797 (14%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           PPL S +Y+ +LQ +        GKQLH   +K G     F    LL  Y      +DA 
Sbjct: 30  PPLTSTTYSTILQSS---NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAW 86

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKE------GHEVNPFVCTTIIK 153
            +FD+M L N  S+  +     R H      +    LF+E      G +++ FV   ++ 
Sbjct: 87  HMFDKMTLKNLHSWTAVL----RLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLN 142

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD--- 210
           +   +    +   +H  V K G   + +VG +LID Y  CG++D A++V +G+  KD   
Sbjct: 143 ICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVS 202

Query: 211 --------------------------------MVSWTGMVGCYAENCFYEESLQLFCQMR 238
                                           +V+W+ ++G ++ N +  ES++LF +M 
Sbjct: 203 WNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMV 262

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
             G  P+  T+ + L +C  ++   VGK +HG  ++     + +V   L+ +Y + GD+ 
Sbjct: 263 GAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMK 322

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV-------------- 344
            A   F +  +K    ++ MI  Y ++    +A ELF+ M Q  V               
Sbjct: 323 SAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHV 382

Query: 345 ---------------------PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
                                P++FT  S+L   A    +  GK+IHS  +  GL SN F
Sbjct: 383 DNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSF 442

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYV---QLG-----------DG 429
           V  AL+++Y KC +I  + + F E  E++  TWN +I GY    Q+G           DG
Sbjct: 443 VGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDG 502

Query: 430 ---------------------EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
                                + AM LF+ M  + ++P   T   +L AC+  A +  G 
Sbjct: 503 FEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGK 562

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           QVH+ +I+  Y++D  +   L+DMYAKCG I      ++K+     V  NAM+  Y+MHG
Sbjct: 563 QVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHG 622

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
              E + +F +M  +  +P+ +TF+ VLS+C +AG +  G   F  M + YNI P ++HY
Sbjct: 623 HGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHY 681

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKP 648
           TCMV LL R GK DEA +LI  +P +   + W ALLG C + K + LG   A+ ++E++P
Sbjct: 682 TCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEP 741

Query: 649 HDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHP 708
            + G +VLL+N+YA A RW ++A  R+ M  KG++K PG SW+E++  VH F   D SH 
Sbjct: 742 SNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQ 801

Query: 709 DNKLICAMLEWLNKKTR 725
             + I  ML+ L K  R
Sbjct: 802 RVEEIYFMLDNLTKFIR 818


>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15028593-15026470 | 20130731
          Length = 571

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/529 (39%), Positives = 311/529 (58%), Gaps = 48/529 (9%)

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
            +VG  L+++YAK G + DA   +E M  KDV+ W+ M+  Y+Q+ R ++AL LF  MR+
Sbjct: 42  FFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMRE 101

Query: 341 ----------SSVV-------------------------PNNFTFASVLQACAAQVLLIL 365
                     SSV+                         PN  T  S+L  CA+   L+ 
Sbjct: 102 ERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLH 161

Query: 366 GKQIHSNVLKVGL-----DSNVFVS--NALMDVYAKCGEIENSMILFME--SPEQNEVTW 416
           GK+ H   +K  L     D N  ++  NAL+D+YAKC  +E +  +F E    +++ VTW
Sbjct: 162 GKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTW 221

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGND--MQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
             MI GY Q GD   A+ LFS M   D  + P + T S VL ACA  AAL  G Q+H+  
Sbjct: 222 TVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYV 281

Query: 475 IK-TRYNNDIA-VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
           ++ +R ++D+  VAN LIDMY+K G ++ A++ FD M KR  +SW +++ GY MHG S +
Sbjct: 282 LRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSED 341

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           A  +F++M++     + +TF+ VL ACS++G++D+G  LF  MS+D+ ++P +EHY CM 
Sbjct: 342 AFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMA 401

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            L GR G+  EA +LI ++  +P+ +VW ALL AC    N++L  F A+ +LE+K  +DG
Sbjct: 402 DLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDG 461

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
           T+ LLSN+YA A+RW +VA +R  MKR G+KK PG SWV+ +  +  F VGD +H  ++ 
Sbjct: 462 TYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQK 521

Query: 713 ICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
           I   L  L ++ +  GYVP  N  L DV+D+EK   L  HSE+LALA+ 
Sbjct: 522 IYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLLEHSEKLALAYA 570



 Score =  161 bits (408), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 60/402 (14%)

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM----------------------- 217
           FVG +L+D Y+ CG ++ A +V++ +  KD+V+W  M                       
Sbjct: 43  FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 102

Query: 218 ------------VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVG 265
                       +  YA+  F  E++ +F QM     RPN  T+ + L  C  + A   G
Sbjct: 103 RIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHG 162

Query: 266 KSVHGCALKACY-------DQDLYVGTELLELYAKSGDIVDAQLFFEEM-PK-KDVIPWS 316
           K  H  ++K          + DL     L+++YAK   +  A+  F+E+ PK +DV+ W+
Sbjct: 163 KETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 222

Query: 317 LMIARYAQSDRSKEALELFHCMRQ--SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           +MI  YAQ   +  AL+LF  M +  + +VPN+FT + VL ACA    L  GKQIH+ VL
Sbjct: 223 VMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVL 282

Query: 375 KVG-LDSNV-FVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
           +   +DS+V FV+N L+D+Y+K G+++ + ++F    ++N ++W +++ GY   G  E A
Sbjct: 283 RRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDA 342

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANA---- 488
             +F  M    +    +TF  VL AC+    +D G+ +       R + D  V       
Sbjct: 343 FRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLF-----YRMSKDFVVDPGVEHY 397

Query: 489 --LIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICGYSMH 527
             + D++ + GR+ +A RL  D   +   V W A++     H
Sbjct: 398 ACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTH 439



 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 51/300 (17%)

Query: 372 NVLKVGLDSNVFVSNALMDVYAKCGEIE-----------------NSMI----------- 403
           N+L V   S  FV NAL+D+YAKCG++E                 N+M+           
Sbjct: 35  NILPV---SGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFED 91

Query: 404 ---LF----MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
              LF     E  E + VTW+++I GY Q G G +AM++F  M G   +P  VT  S+L 
Sbjct: 92  ALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLS 151

Query: 457 ACAGFAALDPGLQVHSLTIK-------TRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
            CA   AL  G + H  +IK          N+D+A  NALIDMYAKC  +  AR  FD++
Sbjct: 152 GCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEI 211

Query: 510 --DKREEVSWNAMICGYSMHGLSTEALNLFNKM-QQTNC-KPNKLTFVGVLSACSNAGLL 565
               R+ V+W  MI GY+ +G +  AL LF++M +  NC  PN  T   VL AC+    L
Sbjct: 212 CPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAAL 271

Query: 566 DKGQSLFKSMSQDYNIEPCIEHYT-CMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
             G+ +   + +   I+  +     C++ +  + G  D A +++ +   + + + W +LL
Sbjct: 272 RFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTA-QVVFDSMSKRNAISWTSLL 330



 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 13/207 (6%)

Query: 63  GKQLHCDILK---RGA----PLDLFAHNILLNFYVQFDCLDDASKLFDEM--PLTNTISF 113
           GK+ HC  +K   +G       DL   N L++ Y +   L+ A  +FDE+     + +++
Sbjct: 162 GKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTW 221

Query: 114 VTLAQGCSRSHQFDHALHVILRLFKEGHEVNP--FVCTTIIKLLVSMDLPHVCWTIHACV 171
             +  G ++    +HAL +   +FK  + + P  F  + ++     +        IHA V
Sbjct: 222 TVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYV 281

Query: 172 YKRGH-QADA-FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEE 229
            +R    +D  FV   LID YS  G+VD A+ VFD +  ++ +SWT ++  Y  +   E+
Sbjct: 282 LRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSED 341

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSC 256
           + ++F +MR      +  T    L +C
Sbjct: 342 AFRVFDEMRKEALVLDGITFLVVLYAC 368


>Medtr4g015760.4 | PPR containing plant-like protein | HC |
           chr4:4765180-4759488 | 20130731
          Length = 703

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/685 (32%), Positives = 350/685 (51%), Gaps = 29/685 (4%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           QLH   LK G   D F    L   Y ++  +  A KLF E P       V L     RS+
Sbjct: 22  QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT----VYLWNALLRSY 77

Query: 125 QFDHALHVILRLFKEGHEVNPFV----------------CTTIIKLLVSMDLPHVCWTIH 168
            F+      L LF++ + V+                   C  + KLL+          IH
Sbjct: 78  CFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGK-------VIH 130

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
             + K     D FVG++LID Y+ CG ++ A +VF      D+V WT ++  Y ++   E
Sbjct: 131 GFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPE 190

Query: 229 ESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTEL 287
            +L  F +M V     P+  T+ +   +C  L  F +G+SVHG   +   D  L +   L
Sbjct: 191 LALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSL 250

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNN 347
           L LY K+G I +A   F EM  KD+I WS M+A YA +    + L+LF+ M    + PN 
Sbjct: 251 LHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNW 310

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
            T  SVL+ACA    L  G +IH   +  G +    VS ALMD+Y KC   E ++ LF  
Sbjct: 311 VTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNR 370

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
            P+++ + W  +  GY   G   ++M +F +M+ +  +P  +    +L   +    L   
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
           + +H+  IK  + N+  +  +LI++YAKC  I DA   F  M  ++ V+W+++I  Y  H
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490

Query: 528 GLSTEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           G   EAL LF +M   ++ KPN +TF+ +LSACS++GL+ +G ++F  M   Y ++P  E
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY  MV LLGR+G+ D A+ +I  +P Q    +W ALLGAC + +NI +G   A+++  +
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
            P+  G ++LLSN+Y+V + W +   +R+ +K K + K  G S VE +  V  F  GD  
Sbjct: 611 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRI 670

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVP 731
           H ++  I  +L  L+ K R+  + P
Sbjct: 671 HDESDHIYEILTKLHAKMREVAFDP 695



 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 235/489 (48%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA K+F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 165

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 166 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ MV CY
Sbjct: 226 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY 285

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 286 ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 345

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A   F  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 346 TVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 405

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L     +H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 406 GTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 465

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+ LF  M   +D +P  VTF S+L AC+ 
Sbjct: 466 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSH 525

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 526 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWG 585

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 586 ALLGACRIH 594


>Medtr4g015760.1 | PPR containing plant-like protein | HC |
           chr4:4766254-4759488 | 20130731
          Length = 703

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/685 (32%), Positives = 350/685 (51%), Gaps = 29/685 (4%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           QLH   LK G   D F    L   Y ++  +  A KLF E P       V L     RS+
Sbjct: 22  QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT----VYLWNALLRSY 77

Query: 125 QFDHALHVILRLFKEGHEVNPFV----------------CTTIIKLLVSMDLPHVCWTIH 168
            F+      L LF++ + V+                   C  + KLL+          IH
Sbjct: 78  CFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGK-------VIH 130

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
             + K     D FVG++LID Y+ CG ++ A +VF      D+V WT ++  Y ++   E
Sbjct: 131 GFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPE 190

Query: 229 ESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTEL 287
            +L  F +M V     P+  T+ +   +C  L  F +G+SVHG   +   D  L +   L
Sbjct: 191 LALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSL 250

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNN 347
           L LY K+G I +A   F EM  KD+I WS M+A YA +    + L+LF+ M    + PN 
Sbjct: 251 LHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNW 310

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
            T  SVL+ACA    L  G +IH   +  G +    VS ALMD+Y KC   E ++ LF  
Sbjct: 311 VTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNR 370

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
            P+++ + W  +  GY   G   ++M +F +M+ +  +P  +    +L   +    L   
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
           + +H+  IK  + N+  +  +LI++YAKC  I DA   F  M  ++ V+W+++I  Y  H
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490

Query: 528 GLSTEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           G   EAL LF +M   ++ KPN +TF+ +LSACS++GL+ +G ++F  M   Y ++P  E
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY  MV LLGR+G+ D A+ +I  +P Q    +W ALLGAC + +NI +G   A+++  +
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
            P+  G ++LLSN+Y+V + W +   +R+ +K K + K  G S VE +  V  F  GD  
Sbjct: 611 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRI 670

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVP 731
           H ++  I  +L  L+ K R+  + P
Sbjct: 671 HDESDHIYEILTKLHAKMREVAFDP 695



 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 235/489 (48%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA K+F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 165

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 166 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ MV CY
Sbjct: 226 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY 285

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 286 ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 345

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A   F  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 346 TVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 405

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L     +H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 406 GTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 465

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+ LF  M   +D +P  VTF S+L AC+ 
Sbjct: 466 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSH 525

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 526 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWG 585

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 586 ALLGACRIH 594


>Medtr2g024080.1 | PPR containing plant-like protein | HC |
           chr2:8563899-8566215 | 20130731
          Length = 767

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/668 (31%), Positives = 357/668 (53%), Gaps = 3/668 (0%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P D++++ +LL+        + G  LH  ++  G   D +  + L+NFYV+F   D A K
Sbjct: 66  PSDAYTFPSLLKACSFLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARK 125

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           +FD MP  N + + T+    S+      A  +  ++  EG  + P   T +  L    ++
Sbjct: 126 VFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEG--IQPSSVTLLSLLFGVSEV 183

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
           P+V   +H C    G  +D  +  S+++ Y  CG+++  R++F+ +  +D+VSW  ++  
Sbjct: 184 PYV-QCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSA 242

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           YA+     E L L  +M++ G  P      + L   +      +G+ VHG  L+  +  D
Sbjct: 243 YAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLD 302

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
            ++ T  + +Y K G+I  A   FE    KDV+ W+ MI+   Q++ + +AL +F  M +
Sbjct: 303 AHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFK 362

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
             + P+  T ASV+ ACA      LGK IH  +L+  L  +    N+L+ +YAKCG ++ 
Sbjct: 363 FGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQ 422

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           S I+F    +++ V+WN ++ GY Q G   KA +LF+ M      P  +T  S+++ CA 
Sbjct: 423 SYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCAS 482

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
              L PG  +H   I+      I V  +L+DMY KCG ++ A+  F+ M  ++ VSW+A+
Sbjct: 483 TGQLHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAI 542

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           I GY  HG    AL L++K  +T  KPN + F+ +LS+CS+ GL+D+G ++++SM++D+ 
Sbjct: 543 IAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFG 602

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
             P +EH+ CMV LL R GK +EA  L   +   P + V   +L AC    N +LG   A
Sbjct: 603 FVPNLEHHACMVDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACRANGNKELGDIIA 662

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYF 700
             +++++P   G +V L++ YA   +W+ V  V  +M+  G++K PG S+++  G +  F
Sbjct: 663 NDIIKLRPMSAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTF 722

Query: 701 SVGDTSHP 708
                SHP
Sbjct: 723 FTDHNSHP 730



 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 177/359 (49%), Gaps = 3/359 (0%)

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           S+  ++  ++    + + L  +  M       + YT  + LK+C  L  F +G S+H   
Sbjct: 36  SYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRV 95

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
           +      D Y+ + L+  Y K G    A+  F+ MP+++V+PW+ +I  Y++    +EA 
Sbjct: 96  IVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAF 155

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVY 392
            LF  MR   + P++ T  S+L   +    +   + +H   +  G  S++ + N+++++Y
Sbjct: 156 SLFRQMRYEGIQPSSVTLLSLLFGVSEVPYV---QCLHGCAIFYGFMSDLNLLNSMVNLY 212

Query: 393 AKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
            KCG IE+   LF     ++ V+WN+++  Y Q+GD  + + L   M    ++P    F 
Sbjct: 213 GKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFG 272

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
           SVL        +  G  VH   ++  +  D  +  + I MY K G IN A   F++   +
Sbjct: 273 SVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDK 332

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           + V W AMI G   +  + +AL +F++M +   KP+  T   V++AC+  G  + G+S+
Sbjct: 333 DVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSI 391



 Score =  144 bits (364), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 171/342 (50%), Gaps = 19/342 (5%)

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           ++ +I R++     ++ L  +  M  +++  + +TF S+L+AC+   L  LG  +H  V+
Sbjct: 37  YNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRVI 96

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
             GL ++ +++++L++ Y K G  + +  +F   PE+N V W T+I  Y ++GD  +A +
Sbjct: 97  VNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFS 156

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMY 493
           LF  M    +QP+ VT  S+L   +      P +Q +H   I   + +D+ + N+++++Y
Sbjct: 157 LFRQMRYEGIQPSSVTLLSLLFGVSEV----PYVQCLHGCAIFYGFMSDLNLLNSMVNLY 212

Query: 494 AKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFV 553
            KCG I D R  F+ MD+R+ VSWN+++  Y+  G   E L L  +M+    +P    F 
Sbjct: 213 GKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFG 272

Query: 554 GVLSACSNA-----GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLI 608
            VLS   +      G L  GQ L      D +IE      T  + +  + G  + A K+ 
Sbjct: 273 SVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIE------TSFIVMYLKGGNINVAFKMF 326

Query: 609 GEIPFQPSVMVWRALLGACVVQKNID--LGRFCAQHVLEMKP 648
            E      V++W A++   V  +N D  L  F       MKP
Sbjct: 327 -ERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKP 367



 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 9/214 (4%)

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
           ++N +I  +   G   + +  ++SM+  ++     TF S+L+AC+       G  +H   
Sbjct: 36  SYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRV 95

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
           I    + D  +A++LI+ Y K G  + AR  FD M +R  V W  +I  YS  G   EA 
Sbjct: 96  IVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAF 155

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD--KGQSLFKSMSQDYNIEPCIEHYTCMV 592
           +LF +M+    +P+ +T + +L   S    +    G ++F     D N+         MV
Sbjct: 156 SLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDLNL------LNSMV 209

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            L G+ G  ++  KL  E   +  V+ W +LL A
Sbjct: 210 NLYGKCGSIEDCRKLF-EFMDRRDVVSWNSLLSA 242


>Medtr3g117150.1 | organelle transcript processing protein, putative
           | HC | chr3:54810037-54807667 | 20130731
          Length = 571

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/537 (38%), Positives = 309/537 (57%), Gaps = 8/537 (1%)

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK---EALELFHCMRQSSV---VP 345
           + SGD+  A+L     P  +   ++ +I  Y+ +       +AL LF  M Q       P
Sbjct: 35  SPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKP 94

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           + FT++  L++C    L    KQ+H  + K+G   ++++ NAL+ +Y++ GE+  +  +F
Sbjct: 95  DTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVF 154

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
                ++ V+W +MI G+V      +A+ LF  M+   +   E T  SVLR CA   AL 
Sbjct: 155 DRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALS 214

Query: 466 PGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYS 525
            G +VH +  +   +    V  ALI MY+KCG +  AR  FD +  R+   W AMI G +
Sbjct: 215 VGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLA 274

Query: 526 MHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCI 585
            HG+  EA+ LF +M+  N KP++ T + VLSA  NAGL+ +G   F  + + Y+++P I
Sbjct: 275 CHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNI 334

Query: 586 EHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH--V 643
           +H+ CMV LL + G  +EA   I  +P +P  ++WR L+ AC V  + +      +H  +
Sbjct: 335 KHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLEL 394

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVG 703
             M  HD G+++L SN+YA   +W + A VR+ M +KG+ K PG S +E  GVVH F +G
Sbjct: 395 QGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMG 454

Query: 704 DTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLL 763
           D  HPD + I   L+ +  K R  GY P  + V+L+++D+EK   L  HSE+LALA+GL+
Sbjct: 455 DYDHPDTEKIFIKLDQMVDKLRKEGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLI 514

Query: 764 RIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           R      IRI+KNLR C DCH  +KLIS+V QR+I+VRD  RFHHF++G CSC DYW
Sbjct: 515 RTCPGSKIRIVKNLRSCEDCHEFMKLISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 571



 Score =  134 bits (336), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 154/302 (50%), Gaps = 4/302 (1%)

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
           +P+ +T + ALKSC  L+     K +HG   K  +  DLY+   L+ +Y++ G++V A+ 
Sbjct: 93  KPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQ 152

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
            F+ M  +DV+ W+ MIA +     + EA++LF  M +  V  N  T  SVL+ CA    
Sbjct: 153 VFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGA 212

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
           L +G+++H  V + G+D    V  AL+ +Y+KCG +E++  +F +  +++   W  MI G
Sbjct: 213 LSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYG 272

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN-- 480
               G  ++A+ LF  M   +++P E T   VL A      +  G    +  ++ RY+  
Sbjct: 273 LACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFN-DVQKRYSMK 331

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHGLSTEALNLFNK 539
            +I     ++D+ AK G + +A    + M  K + V W  +I    +H  +  A  L   
Sbjct: 332 PNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKH 391

Query: 540 MQ 541
           ++
Sbjct: 392 LE 393



 Score =  124 bits (310), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 163/354 (46%), Gaps = 10/354 (2%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRS----HQFDHALHVILRLFKEGHEV---NPFV 147
           L+ A  L +  P  N+  + T+ +  S +    H F  AL + + + +    V   + F 
Sbjct: 40  LNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHF-QALSLFIFMLQPHTNVPKPDTFT 98

Query: 148 CTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIF 207
            +  +K    + L      +H  + K G   D ++  +LI  YS  G +  ARQVFD + 
Sbjct: 99  YSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMS 158

Query: 208 CKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKS 267
            +D+VSWT M+  +  +    E++QLF +M  +G   N  T+ + L+ C    A  VG+ 
Sbjct: 159 HRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRK 218

Query: 268 VHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDR 327
           VHG   +   D    V T L+ +Y+K G +  A+  F+++  +DV  W+ MI   A    
Sbjct: 219 VHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGM 278

Query: 328 SKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSN 386
            KEA+ELF  M   +V P+  T   VL A     L+  G    ++V K   +  N+    
Sbjct: 279 CKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFG 338

Query: 387 ALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
            ++D+ AK G +E +       P + + V W T+I       D E+A  L   +
Sbjct: 339 CMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHL 392



 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 11/329 (3%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P  D+ +Y+  L+   + +     KQLH  I K G   DL+  N L++ Y +   L  A 
Sbjct: 92  PKPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIAR 151

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           ++FD M   + +S+ ++  G    H    A+ +  R+ + G +VN     ++++      
Sbjct: 152 QVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSG 211

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
              V   +H  V ++G    A V T+LI  YS CG +++AR+VFD +  +D+  WT M+ 
Sbjct: 212 ALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIY 271

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC----LGLEAFGVGKSVHGCALKA 275
             A +   +E+++LF +M     +P+  TI   L +     L  E +     V     + 
Sbjct: 272 GLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQK---RY 328

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMI---ARYAQSDRSKEA 331
               ++     +++L AK G + +A+ F   MP K D + W  +I     +A ++R++  
Sbjct: 329 SMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERL 388

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           ++       S+    ++  AS + A   +
Sbjct: 389 MKHLELQGMSAHDSGSYILASNVYASTGK 417


>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:49468862-49466962 | 20130731
          Length = 589

 Score =  377 bits (967), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/558 (36%), Positives = 309/558 (55%), Gaps = 18/558 (3%)

Query: 268 VHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDR 327
            H   +K+    D +    L+  Y K   I  A   F+EM   +V+ WSL++A Y +  +
Sbjct: 45  THANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQ 104

Query: 328 SKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNA 387
              AL LFH M+ + V+PN FTF++++ AC+    L  G++IH+ V   G  S++ V ++
Sbjct: 105 PNIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSS 164

Query: 388 LMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDM-QP 446
           L+D+Y KC  ++ + ++F     +N V+W +MI  Y Q G G  A+ LF       M +P
Sbjct: 165 LIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKP 224

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTF 506
                 S + ACA    L  G   H + I+  ++    VA+AL+DMYAKCG +  +   F
Sbjct: 225 NHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVF 284

Query: 507 DKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD 566
            ++     V + +MI G + +GL T +L LF +M     KPN +TFVGVL          
Sbjct: 285 RRIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVLH--------- 335

Query: 567 KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF--QPSVMVWRALL 624
               LF SM++ Y + P   HYTC+V +LGR+G+ DEA +L   +    +   ++W  LL
Sbjct: 336 ----LFNSMNEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDALLWGTLL 391

Query: 625 GACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKK 684
            A  +   +D+    +  V+E        +V LSN YA+A  W+N  ++R  MKR GV K
Sbjct: 392 SASRLHGRVDIAIEASNRVIESNQQVAAAYVTLSNTYALAGDWENAHNLRSEMKRTGVYK 451

Query: 685 EPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNK-KTRDAGYVP-DCNAVLLDVED 742
           EPG SW+E +   + F  GD S    K     L    + + ++ G+V      V +DVE+
Sbjct: 452 EPGSSWIEIKDSTYLFHAGDLSKCSQKRELLSLLRELEGRMKERGHVGVTTGLVFVDVEE 511

Query: 743 DEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRD 802
           + KE  + +HSE+LALAFGLL  P   +I I+KNLR+C DCH   KLIS++V+RE VVRD
Sbjct: 512 EAKEEIVSLHSEKLALAFGLLNTPKGITIIIMKNLRMCRDCHEAFKLISDIVEREFVVRD 571

Query: 803 INRFHHFQHGVCSCGDYW 820
           +NRFHHF++G C+CGD+W
Sbjct: 572 VNRFHHFKNGSCTCGDFW 589



 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 16/381 (4%)

Query: 168 HACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFY 227
           HA V K G   D F   +LI++Y     +D A ++FD +   ++VSW+ ++  Y      
Sbjct: 46  HANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQP 105

Query: 228 EESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTEL 287
             +L LF QM+     PN +T +  + +C  L     G+ +H       Y  DL V + L
Sbjct: 106 NIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSL 165

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV-VPN 346
           +++Y K   + +AQ+ F+ M  ++V+ W+ MI  Y+Q+ +   AL+LF       +  PN
Sbjct: 166 IDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPN 225

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
           +F   S + ACA+   L  GK  H  V+++G D++  V++AL+D+YAKCG +  S  +F 
Sbjct: 226 HFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFR 285

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
                + V + +MIVG  + G G  ++ LF  M+   ++P  +TF  VL           
Sbjct: 286 RIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVLHL--------- 336

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE---VSWNAMICG 523
               +S+  K     D      ++DM  + GRI++A      +    E   + W  ++  
Sbjct: 337 ---FNSMNEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDALLWGTLLSA 393

Query: 524 YSMHGLSTEALNLFNKMQQTN 544
             +HG    A+   N++ ++N
Sbjct: 394 SRLHGRVDIAIEASNRVIESN 414



 Score =  154 bits (388), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 190/408 (46%), Gaps = 28/408 (6%)

Query: 59  HPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQ 118
           H  +    H +++K G   D F  N L+N Y++   +D A KLFDEM   N +S+  L  
Sbjct: 38  HLPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMA 97

Query: 119 GCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQA 178
           G  R  Q + AL +  ++       N F  +T+I     +        IHA V   G+++
Sbjct: 98  GYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRS 157

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM- 237
           D  V +SLID Y  C  VD A+ +FD ++ +++VSWT M+  Y++N     +LQLF +  
Sbjct: 158 DLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFN 217

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
            +   +PN++ + +A+ +C  L   G GK  HG  ++  +D    V + L+++YAK G +
Sbjct: 218 HIRMNKPNHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCV 277

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQ-- 355
             +   F  +    V+P++ MI   A+      +L LF  M    + PN+ TF  VL   
Sbjct: 278 TYSDKVFRRIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVLHLF 337

Query: 356 ----------------ACAAQVLLILGK-----QIHSNVLKVGLDSNVFVSNALMDVYAK 394
                            C   +L  +G+     Q+  +V +VG + +  +   L+     
Sbjct: 338 NSMNEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSV-QVGSEDDALLWGTLLSASRL 396

Query: 395 CGEIENSMIL---FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
            G ++ ++      +ES +Q    + T+   Y   GD E A NL S M
Sbjct: 397 HGRVDIAIEASNRVIESNQQVAAAYVTLSNTYALAGDWENAHNLRSEM 444



 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 2/164 (1%)

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
           F  L      H+  +K+  +ND    N LI+ Y K  +I+ A   FD+M     VSW+ +
Sbjct: 36  FNHLPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLL 95

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           + GY   G    AL LF++MQ T   PN+ TF  +++ACS    L+ G+ +  ++ + + 
Sbjct: 96  MAGYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRI-HALVEVFG 154

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
               +   + ++ + G+  + DEA ++I +  +  +V+ W +++
Sbjct: 155 YRSDLVVCSSLIDMYGKCNRVDEA-QMIFDFMWVRNVVSWTSMI 197


>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
           scaffold0493:2001-4149 | 20130731
          Length = 611

 Score =  374 bits (959), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/559 (35%), Positives = 308/559 (55%), Gaps = 55/559 (9%)

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAAQ- 360
            F   P  D   ++ +I   + S     +L+ F   +R  +++P++F+FA  L+  A   
Sbjct: 67  LFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDG 126

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWN--- 417
                G Q+HS+  + G D ++FV   L+ +YA+CG  E +  +F E  + N V WN   
Sbjct: 127 CSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVV 186

Query: 418 -----------------------------------TMIVGYVQLGDGEKAMNLFSSMIGN 442
                                              TMIVG+ + G    A   F  ++ +
Sbjct: 187 TACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRD 246

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
             +P+EV+ + VL ACA   A + G  +H    K  +   ++V NALID Y+KCG ++ A
Sbjct: 247 RNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMA 306

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
           +L F+                 +MHG + EA+ +F++M+++  +P+ +TF+ +L ACS++
Sbjct: 307 KLVFN--------------ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHS 352

Query: 563 GLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRA 622
           GL+++G +LF  M   Y IEP IEHY CMV L GR  +  +A + I ++P  P+V++WR 
Sbjct: 353 GLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRT 412

Query: 623 LLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGV 682
           LLGAC +  NI+L       + EM P++ G HVLLSN+YAVA +W +VA +R+ M  + +
Sbjct: 413 LLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSM 472

Query: 683 KKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTR-DAGYVPDCNAVLLDVE 741
           KK PG S +E   V + F  G+  +   K     L  +  + R + GY P   +VL DVE
Sbjct: 473 KKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVE 532

Query: 742 DDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVR 801
           ++EKE  +  HSE+LA AFG+ ++P    +RI+KNLR+C DCHTV+KLIS+V Q EI+VR
Sbjct: 533 EEEKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVR 592

Query: 802 DINRFHHFQHGVCSCGDYW 820
           D +RFH F+ G CSC DYW
Sbjct: 593 DRSRFHSFKGGFCSCRDYW 611



 Score = 98.2 bits (243), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 180/419 (42%), Gaps = 64/419 (15%)

Query: 64  KQLHCDILKRGAPLD-LFAHNILLNFYVQFD--CLDDASKLFDEMPLTNTISFVTLAQGC 120
           KQ+H  +   G      F   +LLN  V      L+ + +LF   P  +T  + TL +  
Sbjct: 27  KQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHFPNPDTFMYNTLIRSL 86

Query: 121 SRSHQFDHALHVILRLFKEGHEV-NPFVCTTIIKLLVSMDLP-HVCWTIHACVYKRGHQA 178
           S S     +L   ++L +    + + F     +K + +          +H+  ++ G   
Sbjct: 87  SHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDD 146

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDG--------------------------------- 205
             FVGT+LI  Y+ CG  + AR+VFD                                  
Sbjct: 147 HIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWRE 206

Query: 206 -IFC----KDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLE 260
            +FC    +D  SW+ M+  +A++  + ++   F ++     RP+  ++T  L +C    
Sbjct: 207 VVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAG 266

Query: 261 AFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIA 320
           AF  GK +HG   KA +   + V   L++ Y+K G++  A+L F           ++ +A
Sbjct: 267 AFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVF-----------NISLA 315

Query: 321 RYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLD 379
            + ++D   EA+ +FH M +S V P+  TF S+L AC+   L+  G  + S +    G++
Sbjct: 316 MHGRAD---EAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIE 372

Query: 380 SNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTM-----IVGYVQLGDGEKA 432
             +     ++D+Y +   ++ +     + P   N + W T+     I G ++L +  KA
Sbjct: 373 PAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKA 431



 Score = 97.1 bits (240), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 173/411 (42%), Gaps = 67/411 (16%)

Query: 167 IHACVYKRG-HQADAFVGTSLID-AYSVCGNV-DAARQVFDGIFCKDMVSWTGMVGCYAE 223
           IH  +Y  G H    F G  L++ A S+  +V + + ++F      D   +  ++   + 
Sbjct: 29  IHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHFPNPDTFMYNTLIRSLSH 88

Query: 224 NCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGK----SVHGCALKACYD 278
           +     SLQ F Q+ R     P++++    LK   G+   G  K     +H  A +  +D
Sbjct: 89  SSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLK---GIANDGCSKRQGIQLHSHAFRHGFD 145

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW----------------------- 315
             ++VGT L+ +YA+ G    A+  F+EM + +V+ W                       
Sbjct: 146 DHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWR 205

Query: 316 ---------------SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
                          S MI  +A+S    +A   F  + +    P+  +   VL ACA  
Sbjct: 206 EVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQA 265

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
                GK +H  + K G    V V+NAL+D Y+KCG ++ + ++F               
Sbjct: 266 GAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN-------------- 311

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
           +     G  ++A+ +F  M  + ++P  VTF S+L AC+    ++ G  + S  ++  Y 
Sbjct: 312 ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFS-KMRNFYG 370

Query: 481 NDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEV-SWNAMICGYSMHG 528
            + A+ +   ++D+Y +  R+  A     +M     V  W  ++   S+HG
Sbjct: 371 IEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHG 421



 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 45/269 (16%)

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM---DVYAKCGEIENSMILFMES 408
           S+L  C     L   KQIH+++   GL ++ F    L+    V      +  S+ LF   
Sbjct: 14  SLLSNC--NTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHF 71

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN-DMQPTEVTFSSVLRACAGFA-ALDP 466
           P  +   +NT+I           ++  F  ++ +  + P   +F+  L+  A    +   
Sbjct: 72  PNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQ 131

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK--------------- 511
           G+Q+HS   +  +++ I V   LI MYA+CG    AR  FD+M +               
Sbjct: 132 GIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFR 191

Query: 512 -----------------------REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPN 548
                                  R++ SW+ MI G++  G   +A   F ++ +   +P+
Sbjct: 192 CGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPS 251

Query: 549 KLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
           +++  GVLSAC+ AG  + G+ L   M +
Sbjct: 252 EVSLTGVLSACAQAGAFEFGKILHGFMEK 280


>Medtr7g113540.1 | PPR containing plant-like protein | HC |
           chr7:46789868-46787166 | 20130731
          Length = 650

 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/597 (34%), Positives = 335/597 (56%), Gaps = 17/597 (2%)

Query: 166 TIHACVYKR-------GHQADA-FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
           +IHA + K+       G Q +A F+  SL+  YS CG    A  VFD +  +D VSW  M
Sbjct: 55  SIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTM 114

Query: 218 VGCYAENCFYEESLQLFCQMRVMGY---RPNNYTITAALKSCLGLEAFGVGKSV----HG 270
           +  +  N  ++ S + F QM        R +  T+T  L  C GL   G+  SV    HG
Sbjct: 115 ISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLR-LGISTSVTQMIHG 173

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
                 +++++ VG  L+  Y K       +  F+EM +++V+ W+ +I+  AQ++  ++
Sbjct: 174 LVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYED 233

Query: 331 ALELFHCMRQ-SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM 389
           +L LF  MR   SV PN  T+ S L AC+   +L  G++IH  + K+G+ S++ + +ALM
Sbjct: 234 SLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALM 293

Query: 390 DVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEV 449
           D+Y+KCG ++ +  +F  + E + V+   ++V + Q G  E+A+ +F+ M+   M+    
Sbjct: 294 DLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDAN 353

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
             S+VL        L  G Q+HSL IK  +  +  V N L++MY+KCG ++D+ L F +M
Sbjct: 354 MVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQM 413

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
            ++  VSWN++I  ++ HG   +AL  + +M+     P  +TF+ +L ACS+AGL++KG 
Sbjct: 414 TQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGM 473

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
            L +SM+ D+ I P  EHY C+V +LGR G  +EA K I  +P    V+VW+ALLGAC +
Sbjct: 474 ELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSI 533

Query: 630 QKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
             + ++G++ A  +    P     +VL++N+Y+    W   AS  K MK  GV KE G+S
Sbjct: 534 HGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGIS 593

Query: 690 WVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKE 746
           W+E +  V+ F VGD  HP+  +I  +L  L K  +D GYVPD   +L  +E D+++
Sbjct: 594 WIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLKDEGYVPDKKFILFYLEQDKED 650



 Score =  238 bits (608), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 262/508 (51%), Gaps = 25/508 (4%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLD--------LFAHNILLNFYVQFD 93
           L+     +LL    ++R+   G  +H  I+K+    D        LF  N LL+ Y +  
Sbjct: 32  LNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCG 91

Query: 94  CLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVC----T 149
              +A  +FD MP+ +T+S+ T+  G  R+  FD +     + FK+  E N   C     
Sbjct: 92  EFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTS----FKFFKQMTESNRVCCRFDKA 147

Query: 150 TIIKLLVSMD------LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF 203
           T+  +L   D         V   IH  V+  G + +  VG +LI +Y  C      R+VF
Sbjct: 148 TLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVF 207

Query: 204 DGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAF 262
           D +  +++V+WT ++   A+N FYE+SL+LF QMR  G   PN  T  ++L +C GL+  
Sbjct: 208 DEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVL 267

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
             G+ +HG   K     DL + + L++LY+K G +  A   FE   + D +  ++++  +
Sbjct: 268 RDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAF 327

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNV 382
           AQ+   +EA+++F  M    +  +    ++VL        L LGKQIHS ++K     N 
Sbjct: 328 AQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENP 387

Query: 383 FVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
           FV N L+++Y+KCG++ +S+++F +  ++N V+WN++I  + + GDG KA+  +  M   
Sbjct: 388 FVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVE 447

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGRIND 501
            + PT+VTF S+L AC+    ++ G++ + S+T     +        ++DM  + G +N+
Sbjct: 448 GVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNE 507

Query: 502 ARLTFDKMDKREEV-SWNAMICGYSMHG 528
           A+   + + +   V  W A++   S+HG
Sbjct: 508 AKKFIEGLPEHGGVLVWQALLGACSIHG 535


>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:18562024-18564318 | 20130731
          Length = 740

 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/500 (38%), Positives = 297/500 (59%), Gaps = 17/500 (3%)

Query: 338 MRQSSVVPNNFTFASVLQACAA-QVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKC 395
           +   ++ PN+FTF S+ +AC + Q     G  +H++VLK +    + FV  +L++ YAK 
Sbjct: 241 LTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKY 300

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQ----------LGDGE---KAMNLFSSMIGN 442
           G++  S  +F    E +  TWN ++  Y +            D +   +++ LF  M   
Sbjct: 301 GKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVI 360

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
            ++P EVT  +++ AC+   A+  G  VH   ++ +   +  V  A +DMY+KCG +N A
Sbjct: 361 GIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLA 420

Query: 503 RLTFDKM--DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
              FDKM  + R+   + AMI G+++HG   +AL L+ KM+     P+  TFV  + ACS
Sbjct: 421 CQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACS 480

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
           + GL+++G  +FKSM + + +EP +EHY C++ LLGR G+  EA + + ++P +P+ ++W
Sbjct: 481 HVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLW 540

Query: 621 RALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRK 680
           R+LLGA  +  N+ +G      ++E++P   G +VLLSNMYA   R ++V  VRK MK  
Sbjct: 541 RSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHH 600

Query: 681 GVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 740
           GV K PG S VE +G +H F  GD SHP +K I   +  +N +  + G+    +  L D+
Sbjct: 601 GVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDL 660

Query: 741 EDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVV 800
           E+++KE  L  HSERLA+AF L+  PS+ +IRI+KNLR+C DCH   KLIS    REI+V
Sbjct: 661 EEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIV 720

Query: 801 RDINRFHHFQHGVCSCGDYW 820
           RD NRFHHF+ G CSC DYW
Sbjct: 721 RDRNRFHHFKDGSCSCLDYW 740



 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 231/531 (43%), Gaps = 60/531 (11%)

Query: 44  SHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFD 103
           +H     LQQ   N   N  KQ+H  I+  G     +  + L+    +F+ L  A K+F+
Sbjct: 148 NHPTLQTLQQKCNNF--NTLKQIHTQIITTGLSFQTYCLSHLIKISSKFN-LPYAFKIFN 204

Query: 104 EMPLTNTISFVTLAQG-CSRSHQFDHALHVILRLFKE-----GHEVNPFVCTTIIKLLVS 157
            +       + TL     ++++Q  + +H+   L+ +       + N F   ++ K   S
Sbjct: 205 YISNPTIFLYNTLISSLINQTNQ--NQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCS 262

Query: 158 -MDLPHVCWTIHACVYKRGHQA-DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
                H    +H  V K      D FV  SL++ Y+  G +  +R +FD I   D+ +W 
Sbjct: 263 NQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWN 322

Query: 216 GMVGCYAENC-------------FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
            ++  YA +              F  ESL LF  M+V+G RPN  TI A + +C  L A 
Sbjct: 323 VILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAV 382

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK--KDVIPWSLMIA 320
             G  VH   L+     + +VGT  +++Y+K G +  A   F++MP+  +D   ++ MI 
Sbjct: 383 SQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIG 442

Query: 321 RYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLD 379
            +A      +ALEL+  M+   +VP++ TF   + AC+   L+  G +I  ++ +V G++
Sbjct: 443 GFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVE 502

Query: 380 SNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVG---YVQLGDGEKAMN- 434
             +     L+D+  + G ++ +     + P + N V W +++     +  LG GE A+  
Sbjct: 503 PKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTK 562

Query: 435 -------------LFSSMIGNDMQPTEVTFSSVL------RACAGFAALDPGLQVHSLTI 475
                        L S+M  +  +  +V     L          GF+ ++    +H    
Sbjct: 563 LIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLT 622

Query: 476 KTRYNN-------DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
             R +         IA  N+ ++ Y    R ++A    ++ DK   +S+++
Sbjct: 623 GDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHS 673


>Medtr5g018370.1 | PPR containing plant-like protein | HC |
           chr5:6845861-6848150 | 20130731
          Length = 714

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/653 (32%), Positives = 357/653 (54%), Gaps = 8/653 (1%)

Query: 63  GKQLHCDILKR---GAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQG 119
            +QLH  +L           F +N +++ Y +   L+DA ++FD+MP    +S+  L   
Sbjct: 27  ARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAA 86

Query: 120 CSRSHQFD--HALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQ 177
            SR  +    +A ++  ++   G   +    T++++         +   +HA   K G  
Sbjct: 87  YSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFL 146

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
            D  V TSL++ YS C ++ +A  VF  +  +D V+W  ++  Y +N   E+ + LF +M
Sbjct: 147 NDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEM 206

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
             +G+ P  YT    L +C  L+ +  G+ +H   +      DL++   L+++Y  +GD 
Sbjct: 207 MWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDT 266

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV-VPNNFTFASVLQA 356
             A + F  M K D++ W+ MI+ Y +++  ++A+ LF  ++      P+++T+A ++ A
Sbjct: 267 QTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISA 326

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
             A      GK +H  V+K G   +VFV + L+ +Y K  E E ++ +F   P ++ + W
Sbjct: 327 TGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILW 386

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
             MI GY ++ DG  A+  FS M     +  +   S VL  CA  A L  G  +H    K
Sbjct: 387 TEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYK 446

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
             Y+ +++V+ +LIDMYAK G +  A L F ++   +   WN+M+ G+S HG+  +AL L
Sbjct: 447 LGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKL 506

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLG 596
           F ++ +    P+++TF+ +LSACS++ L+++G+ L+  MS    + P  +HY+CMV LL 
Sbjct: 507 FEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSS-IGLVPGPKHYSCMVTLLS 565

Query: 597 RLGKFDEAVKLIGEIPF-QPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHV 655
           R    +EA ++I + P+ + +V +WR LL ACV+ KN+ +G   A+ VL     D  T +
Sbjct: 566 RAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLI 625

Query: 656 LLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHP 708
           LLSN+YA A RWD VA +R+NMK   ++KEPGLSW+E +  +H FS GD SHP
Sbjct: 626 LLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGDQSHP 678



 Score =  169 bits (429), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 1/421 (0%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPL 107
            +LLQ A  +     G  LH   LK G   D+     LLN Y     L  A  +F +M  
Sbjct: 118 TSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNE 177

Query: 108 TNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTI 167
            + +++ +L  G  ++ + +  +++ + +   G     +    I+     +        I
Sbjct: 178 RDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLI 237

Query: 168 HACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFY 227
           HA V       D  +  +L+D Y   G+   A  +F  +   D+VSW  M+  Y EN   
Sbjct: 238 HARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDG 297

Query: 228 EESLQLFCQMRVMGY-RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           E+++ LF Q++ + + +P++YT    + +      F  GK +HG  +KA + + ++VG+ 
Sbjct: 298 EKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGST 357

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+ +Y K+ +   A   F  +P KD I W+ MI  Y++      A+  F  M       +
Sbjct: 358 LVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEID 417

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
           ++  + VL  CA   +L  G+ IH    K+G D  + VS +L+D+YAK G +E + ++F 
Sbjct: 418 DYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFS 477

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
           +    +   WN+M+ G+   G  + A+ LF  +I   + P +VTF S+L AC+    ++ 
Sbjct: 478 QVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQ 537

Query: 467 G 467
           G
Sbjct: 538 G 538



 Score = 87.0 bits (214), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 104/217 (47%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P  D ++YA ++         + GK LH  ++K G    +F  + L++ Y +    + A 
Sbjct: 313 PKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAAL 372

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           ++F  +P  + I +  +  G S+      A+     +  E HE++ +V + ++ +   + 
Sbjct: 373 RVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLA 432

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
           +      IH   YK G+  +  V  SLID Y+  GN++AA  VF  +   D+  W  M+G
Sbjct: 433 ILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLG 492

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
            ++ +   +++L+LF ++   G  P+  T  + L +C
Sbjct: 493 GFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSAC 529


>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15020896-15019352 | 20130731
          Length = 514

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/500 (40%), Positives = 303/500 (60%), Gaps = 17/500 (3%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFF----EEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
           +D+     ++  Y+++G   DA   F    EE  + DV+ WS +I+ YAQ     EA+++
Sbjct: 14  KDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDV 73

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL-----DSNVFVS--NA 387
           F  M   S  PN  T  S+L  CA+   L+ GK+ H   +K  L     D N  ++  NA
Sbjct: 74  FRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINA 133

Query: 388 LMDVYAKCGEIENSMILFME--SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-- 443
           L+D+YAKC  +E +  +F E    +++ VTW  MI GY Q GD   A+ LFS M   D  
Sbjct: 134 LIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNC 193

Query: 444 MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK-TRYNNDIA-VANALIDMYAKCGRIND 501
           + P + T S VL ACA  AAL  G Q+H+  ++ +R ++D+  VAN LIDMY+K G ++ 
Sbjct: 194 IVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDT 253

Query: 502 ARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           A++ FD M KR  +SW +++ GY MHG S +A  +F++M++     + +TF+ VL ACS+
Sbjct: 254 AQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSH 313

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
           +G++D+G  LF  MS+D+ ++P +EHY CM  L GR G+  EA +LI ++  +P+ +VW 
Sbjct: 314 SGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWI 373

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           ALL AC    N++L  F A+ +LE+K  +DGT+ LLSN+YA A+RW +VA +R  MKR G
Sbjct: 374 ALLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTG 433

Query: 682 VKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVE 741
           +KK PG SWV+ +  +  F VGD +H  ++ I   L  L ++ +  GYVP  N  L DV+
Sbjct: 434 IKKRPGWSWVQGRKGMETFYVGDRTHSQSQKIYETLADLIQRIKAIGYVPQTNFALHDVD 493

Query: 742 DDEKERHLWVHSERLALAFG 761
           D+EK   L  HSE+LALA+ 
Sbjct: 494 DEEKGDQLLEHSEKLALAYA 513



 Score =  160 bits (404), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 194/381 (50%), Gaps = 29/381 (7%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK----DMVSWTGMVGCYAENCF 226
           VY+R    D     +++  YS  G  + A  +F  +  +    D+V+W+ ++  YA+  F
Sbjct: 7   VYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGF 66

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY-------DQ 279
             E++ +F QM     RPN  T+ + L  C  + A   GK  H  ++K          + 
Sbjct: 67  GCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDND 126

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEM-PK-KDVIPWSLMIARYAQSDRSKEALELFHC 337
           DL     L+++YAK   +  A+  F+E+ PK +DV+ W++MI  YAQ   +  AL+LF  
Sbjct: 127 DLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSE 186

Query: 338 MRQ--SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG-LDSNV-FVSNALMDVYA 393
           M +  + +VPN+FT + VL ACA    L  GKQIH+ VL+   +DS+V FV+N L+D+Y+
Sbjct: 187 MFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYS 246

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           K G+++ + ++F    ++N ++W +++ GY   G  E A  +F  M    +    +TF  
Sbjct: 247 KSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLV 306

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANA------LIDMYAKCGRINDA-RLTF 506
           VL AC+    +D G+ +       R + D  V         + D++ + GR+ +A RL  
Sbjct: 307 VLYACSHSGMVDRGIDLF-----YRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLIN 361

Query: 507 DKMDKREEVSWNAMICGYSMH 527
           D   +   V W A++     H
Sbjct: 362 DMSMEPTPVVWIALLSACRTH 382



 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 13/207 (6%)

Query: 63  GKQLHCDILK---RGA----PLDLFAHNILLNFYVQFDCLDDASKLFDEM--PLTNTISF 113
           GK+ HC  +K   +G       DL   N L++ Y +   L+ A  +FDE+     + +++
Sbjct: 105 GKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTW 164

Query: 114 VTLAQGCSRSHQFDHALHVILRLFKEGHEVNP--FVCTTIIKLLVSMDLPHVCWTIHACV 171
             +  G ++    +HAL +   +FK  + + P  F  + ++     +        IHA V
Sbjct: 165 TVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYV 224

Query: 172 YKRGH-QADA-FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEE 229
            +R    +D  FV   LID YS  G+VD A+ VFD +  ++ +SWT ++  Y  +   E+
Sbjct: 225 LRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSED 284

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSC 256
           + ++F +MR      +  T    L +C
Sbjct: 285 AFRVFDEMRKEALVLDGITFLVVLYAC 311



 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 46/77 (59%)

Query: 499 INDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSA 558
           + DA   +++M  ++ V+WNAM+ GYS +G   +AL+LF KM++   + + +T+  V+S 
Sbjct: 1   MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60

Query: 559 CSNAGLLDKGQSLFKSM 575
            +  G   +   +F+ M
Sbjct: 61  YAQRGFGCEAMDVFRQM 77


>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
           scaffold0013:48776-47089 | 20130731
          Length = 558

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/539 (36%), Positives = 317/539 (58%), Gaps = 4/539 (0%)

Query: 285 TELLELYA--KSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           T+LLEL++   SG++  A   F ++       ++ ++   AQS    +++  +  M    
Sbjct: 21  TKLLELFSVSPSGNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCV 80

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
              +  T +  L+ CA  +      Q+HS VL+ G D++V +   L+DVYAK G I+ + 
Sbjct: 81  QRVDALTCSFALKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYAR 140

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            +F E  +++  +WN MI G  Q    ++A+ LF+ M     +P +VT    L AC+   
Sbjct: 141 KVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLG 200

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE-VSWNAMI 521
           AL  G  VH   +  + + ++ V NA+IDM+AKCG ++ A   F+ M  R+  ++WN MI
Sbjct: 201 ALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMI 260

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             ++M+G   +AL+L ++M      P+ ++++G L AC++AGL+D+G  LF  M     +
Sbjct: 261 MAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVS-GV 319

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           +  ++HY  MV LLGR G+  EA ++I  +P  P V++W++LLGAC    N+++    ++
Sbjct: 320 KLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNVEMAEMASK 379

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
            ++EM  +  G  VLLSN+YA  +RW +V  VR+ M    V+K PG S+ E  G +H F 
Sbjct: 380 KLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFSYTEVDGRIHKFI 439

Query: 702 VGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFG 761
             D SHP++K I A L+ +  + ++ GY+ + N VL D+ D++KE  L  HSE+LA+A+G
Sbjct: 440 NYDQSHPNSKEIYAKLDEIKFRIKEYGYIAETNLVLHDIGDEDKENALNYHSEKLAVAYG 499

Query: 762 LLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           L+       I+++KNLRICVDCH  IK+IS +  REI+VRD  RFH F+ GVCSC DYW
Sbjct: 500 LISTVDGTPIQVIKNLRICVDCHAFIKIISNIYNREIIVRDRARFHRFKDGVCSCRDYW 558



 Score =  148 bits (374), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 178/349 (51%), Gaps = 4/349 (1%)

Query: 184 TSLIDAYSVC--GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           T L++ +SV   GN+  A  +F  I       +  ++   A++    +S+  +  M    
Sbjct: 21  TKLLELFSVSPSGNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCV 80

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            R +  T + ALK C    AF     +H   L+  +D D+ + T LL++YAK+G I  A+
Sbjct: 81  QRVDALTCSFALKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYAR 140

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F+EM K+D+  W+ MI+  AQ  R  EA+ LF+ M++    PN+ T    L AC+   
Sbjct: 141 KVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLG 200

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQNEVTWNTMI 420
            L  G+ +H  VL   LD NV V NA++D++AKCG ++ +  +F   S  ++ +TWNTMI
Sbjct: 201 ALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMI 260

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
           + +   GDG KA++L   M  +   P  V++   L AC     +D G+++  L   +   
Sbjct: 261 MAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVK 320

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMHG 528
            ++    +++D+  + GR+ +A    + M    +V  W +++     +G
Sbjct: 321 LNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYG 369



 Score =  110 bits (274), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 162/342 (47%), Gaps = 12/342 (3%)

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
           A  +F ++    T  +  + +G ++S +   ++     +      V+   C+  +K    
Sbjct: 38  AGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCVQRVDALTCSFALKGCAR 97

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
                    +H+ V + G  AD  + T+L+D Y+  G +D AR+VFD +  +D+ SW  M
Sbjct: 98  ALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAM 157

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           +   A+    +E++ LF +M+  G+RPN+ T+  AL +C  L A   G+ VH   L    
Sbjct: 158 ISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDEKL 217

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIARYAQSDRSKEALELFH 336
           D+++ V   +++++AK G +  A   FE M  +K +I W+ MI  +A +    +AL+L  
Sbjct: 218 DRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGDGYKALDLLD 277

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
            M      P+  ++   L AC    L+  G ++   +   G+  NV    +++D+  + G
Sbjct: 278 RMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVKLNVKHYGSMVDLLGRAG 337

Query: 397 ------EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
                 EI NSM +F      + V W +++      G+ E A
Sbjct: 338 RLKEAYEIINSMPMF-----PDVVLWQSLLGACKTYGNVEMA 374



 Score = 70.5 bits (171), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 145/347 (41%), Gaps = 44/347 (12%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           QLH  +L+ G   D+     LL+ Y +   +D A K+FDEM   +  S+  +  G ++  
Sbjct: 106 QLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGS 165

Query: 125 QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
           + D A+ +  R+ +EG   N       +     +        +H  V       +  V  
Sbjct: 166 RPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCN 225

Query: 185 SLIDAYSVCGNVDAARQVFDGIFC-KDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           ++ID ++ CG VD A  VF+ + C K +++W  M+  +A N    ++L L  +M + G  
Sbjct: 226 AVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTC 285

Query: 244 PNNYTITAALKSC--LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
           P+  +   AL +C   GL   GV                      L +L   SG      
Sbjct: 286 PDAVSYLGALCACNHAGLVDEGV---------------------RLFDLMKVSG------ 318

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
                  K +V  +  M+    ++ R KEA E+ + M    + P+   + S+L AC    
Sbjct: 319 ------VKLNVKHYGSMVDLLGRAGRLKEAYEIINSM---PMFPDVVLWQSLLGACKTYG 369

Query: 362 LLILGKQIHSNVLKVGLDSN---VFVSN--ALMDVYAKCGEIENSMI 403
            + + +     ++++G +S+   V +SN  A    +   G +  +M+
Sbjct: 370 NVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMV 416


>Medtr4g015760.2 | PPR containing plant-like protein | HC |
           chr4:4766254-4759488 | 20130731
          Length = 673

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/660 (32%), Positives = 341/660 (51%), Gaps = 29/660 (4%)

Query: 90  VQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFV-- 147
           +Q+  +  A KLF E P       V L     RS+ F+      L LF++ + V+     
Sbjct: 17  LQYASIHHAHKLFQETPHRT----VYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIE 72

Query: 148 --------------CTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVC 193
                         C  + KLL+          IH  + K     D FVG++LID Y+ C
Sbjct: 73  ERPDNYSVSIALKSCAGLRKLLLGK-------VIHGFLKKVRIDGDMFVGSALIDLYTKC 125

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM-GYRPNNYTITAA 252
           G ++ A +VF      D+V WT ++  Y ++   E +L  F +M V     P+  T+ + 
Sbjct: 126 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 185

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
             +C  L  F +G+SVHG   +   D  L +   LL LY K+G I +A   F EM  KD+
Sbjct: 186 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 245

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
           I WS M+A YA +    + L+LF+ M    + PN  T  SVL+ACA    L  G +IH  
Sbjct: 246 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL 305

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
            +  G +    VS ALMD+Y KC   E ++ LF   P+++ + W  +  GY   G   ++
Sbjct: 306 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHES 365

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDM 492
           M +F +M+ +  +P  +    +L   +    L   + +H+  IK  + N+  +  +LI++
Sbjct: 366 MWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEV 425

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM-QQTNCKPNKLT 551
           YAKC  I DA   F  M  ++ V+W+++I  Y  HG   EAL LF +M   ++ KPN +T
Sbjct: 426 YAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVT 485

Query: 552 FVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEI 611
           F+ +LSACS++GL+ +G ++F  M   Y ++P  EHY  MV LLGR+G+ D A+ +I  +
Sbjct: 486 FISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 545

Query: 612 PFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVA 671
           P Q    +W ALLGAC + +NI +G   A+++  + P+  G ++LLSN+Y+V + W +  
Sbjct: 546 PMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSAT 605

Query: 672 SVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
            +R+ +K K + K  G S VE +  V  F  GD  H ++  I  +L  L+ K R+  + P
Sbjct: 606 KLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVAFDP 665



 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 235/489 (48%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA K+F
Sbjct: 76  DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 135

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 136 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 195

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ MV CY
Sbjct: 196 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY 255

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 256 ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 315

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A   F  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 316 TVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 375

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L     +H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 376 GTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 435

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+ LF  M   +D +P  VTF S+L AC+ 
Sbjct: 436 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSH 495

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 496 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWG 555

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 556 ALLGACRIH 564


>Medtr4g015760.3 | PPR containing plant-like protein | HC |
           chr4:4765180-4759488 | 20130731
          Length = 673

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/660 (32%), Positives = 341/660 (51%), Gaps = 29/660 (4%)

Query: 90  VQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFV-- 147
           +Q+  +  A KLF E P       V L     RS+ F+      L LF++ + V+     
Sbjct: 17  LQYASIHHAHKLFQETPHRT----VYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIE 72

Query: 148 --------------CTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVC 193
                         C  + KLL+          IH  + K     D FVG++LID Y+ C
Sbjct: 73  ERPDNYSVSIALKSCAGLRKLLLGK-------VIHGFLKKVRIDGDMFVGSALIDLYTKC 125

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM-GYRPNNYTITAA 252
           G ++ A +VF      D+V WT ++  Y ++   E +L  F +M V     P+  T+ + 
Sbjct: 126 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 185

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
             +C  L  F +G+SVHG   +   D  L +   LL LY K+G I +A   F EM  KD+
Sbjct: 186 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 245

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
           I WS M+A YA +    + L+LF+ M    + PN  T  SVL+ACA    L  G +IH  
Sbjct: 246 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL 305

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
            +  G +    VS ALMD+Y KC   E ++ LF   P+++ + W  +  GY   G   ++
Sbjct: 306 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHES 365

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDM 492
           M +F +M+ +  +P  +    +L   +    L   + +H+  IK  + N+  +  +LI++
Sbjct: 366 MWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEV 425

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM-QQTNCKPNKLT 551
           YAKC  I DA   F  M  ++ V+W+++I  Y  HG   EAL LF +M   ++ KPN +T
Sbjct: 426 YAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVT 485

Query: 552 FVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEI 611
           F+ +LSACS++GL+ +G ++F  M   Y ++P  EHY  MV LLGR+G+ D A+ +I  +
Sbjct: 486 FISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 545

Query: 612 PFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVA 671
           P Q    +W ALLGAC + +NI +G   A+++  + P+  G ++LLSN+Y+V + W +  
Sbjct: 546 PMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSAT 605

Query: 672 SVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
            +R+ +K K + K  G S VE +  V  F  GD  H ++  I  +L  L+ K R+  + P
Sbjct: 606 KLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVAFDP 665



 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 235/489 (48%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA K+F
Sbjct: 76  DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 135

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 136 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 195

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ MV CY
Sbjct: 196 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY 255

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 256 ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 315

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A   F  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 316 TVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 375

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L     +H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 376 GTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 435

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+ LF  M   +D +P  VTF S+L AC+ 
Sbjct: 436 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSH 495

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 496 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWG 555

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 556 ALLGACRIH 564


>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:21642144-21644166 | 20130731
          Length = 625

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/604 (33%), Positives = 344/604 (56%), Gaps = 15/604 (2%)

Query: 100 KLFDEMPLTNTISFVTLAQGCS---RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLV 156
           KL   +P+  T SF++         ++    HA+H +L   +    + P +  ++++  V
Sbjct: 3   KLHHHLPVKQTHSFISTDSEILHHLKTGSLSHAIH-LLNTSQPTLSLKPVIYASLLQTSV 61

Query: 157 SMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAY---SVCGNVDAARQVFDGIFCKDMVS 213
             +  H   ++HA V K G  +D FVG SL+  Y   +   ++  AR +FD +  KD++S
Sbjct: 62  KTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVIS 121

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           WT ++  Y  +    +S+ LF +M     +PN +T+++ +K+C  L    +G+  H   L
Sbjct: 122 WTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGRCFHSMVL 181

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM-PKKDVIPWSLMIARYAQSDRSKEAL 332
              +D +  V   L+++Y  +  + DA+  F+E+  K DV  W+ +I+ + ++D  KE+L
Sbjct: 182 TRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTRNDMFKESL 241

Query: 333 ELFHCM-RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDV 391
           + F+ M R   VVP+ +TF ++L ACA   LL  GK++H  V+ +G   NV V ++L+D+
Sbjct: 242 KFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDM 301

Query: 392 YAKCGEIENSMILFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           Y KCG + +S I+F   S E+N V+W  M+  Y Q  + +  ++L       D+      
Sbjct: 302 YGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRER--GDLNF--YA 357

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD 510
           F  VLRAC+G AA++ G +VH + ++   + D+ + +AL+D+YAKCG ++ A   F  M+
Sbjct: 358 FGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASME 417

Query: 511 KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQS 570
            R  ++WN+M+ G++ +G   EAL LF  M +   KP+ +TFV VL ACS+AGL+D+G+ 
Sbjct: 418 VRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRK 477

Query: 571 LFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQ 630
           +F  M + Y I+P +EHY CM+ LLGR G  DEA  L+     +    +W ALLGAC   
Sbjct: 478 VFTLMGE-YGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGACTKC 536

Query: 631 KNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSW 690
            +       A+ ++E++P    ++VLL+N+Y    RWD+   +RK M+ +GVKK  G SW
Sbjct: 537 SDYRTAERVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGKSW 596

Query: 691 VENQ 694
           +++Q
Sbjct: 597 IDSQ 600



 Score =  241 bits (615), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/482 (30%), Positives = 253/482 (52%), Gaps = 11/482 (2%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC---LDDASKLFD 103
           YA+LLQ +++    + G  +H  +LK G   D F  N LL  Y + +    L  A  LFD
Sbjct: 53  YASLLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFD 112

Query: 104 EMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV 163
            + + + IS+ +L  G +RS     ++ +   +     + N F  +++IK   +++  ++
Sbjct: 113 SLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNL 172

Query: 164 CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMV-SWTGMVGCYA 222
               H+ V  RG   +  V  SLID Y     VD AR+VFD +F KD V  WT ++ C+ 
Sbjct: 173 GRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFT 232

Query: 223 ENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
            N  ++ESL+ F  M RV G  P+ YT    L +C  L     GK VHG  +   +  ++
Sbjct: 233 RNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNV 292

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
            V + LL++Y K G +  +++ FE +  +K+ + W+ M+  Y Q+   +  L+L   +R+
Sbjct: 293 VVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDL---VRE 349

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
              + N + F  VL+AC+    +  GK++H   ++ G   +V + +AL+D+YAKCG ++ 
Sbjct: 350 RGDL-NFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDF 408

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F     +N +TWN+M+ G+ Q G G +A+ LF  MI   ++P  +TF +VL AC+ 
Sbjct: 409 ACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSH 468

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNA 519
              +D G +V +L  +      +   N +ID+  + G I++A    +  D R + S W A
Sbjct: 469 AGLVDEGRKVFTLMGEYGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAA 528

Query: 520 MI 521
           ++
Sbjct: 529 LL 530


>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:3995998-3993764 | 20130731
          Length = 637

 Score =  370 bits (951), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/616 (37%), Positives = 330/616 (53%), Gaps = 53/616 (8%)

Query: 253 LKSCLGLEAFGVGKSVHGCALKA--CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK- 309
           L+ C    A   G+ +H  A+        + ++   LL LY        A+  F+E+P+ 
Sbjct: 27  LRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQS 86

Query: 310 -KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA--AQVLLILG 366
            KD + ++ +I          E+L+LF  MRQ  +  +       L ACA        +G
Sbjct: 87  HKDSVDYTALIRHCPPF----ESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVG 142

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCG------------------------------ 396
            Q+H  V+K G      V NALM+VY K G                              
Sbjct: 143 SQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKW 202

Query: 397 -EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI-GNDMQPTEVTFSSV 454
             +E+  +LF E PE+NEV W  MIVGYV  G  ++A  L   M+ G   + + VT  SV
Sbjct: 203 ESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSV 262

Query: 455 LRACAGFAALDPGLQVHSLTIKTR-YNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           L AC+    +  G  VH   +K    +  + V  +L+DMYAKCGRIN A   F  M KR 
Sbjct: 263 LSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRN 322

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK 573
            V+WNAM+ G +MHG+   A+++F  M +   KP+ +TF+ +LSACS++GL++KG   F 
Sbjct: 323 VVAWNAMLGGLAMHGMGKIAVDMFPSMVE-EVKPDGVTFMALLSACSHSGLVEKGWDYFH 381

Query: 574 SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI 633
            +   Y I+P IEHY CMVGLLGR G+ +EA  ++  +   P+ +V  +L+G+C     +
Sbjct: 382 DLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRL 441

Query: 634 DLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVEN 693
            LG    + +LEM P +   H++LSNMYA++ + +   S+R+ +K++G+KK PG+S +  
Sbjct: 442 QLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYV 501

Query: 694 QGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLL---DVEDD------E 744
            G +H F  GD SH     I   L+ +  + R AGYVP+ +  +L      DD      E
Sbjct: 502 DGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTSCQVLFGCSNRDDCSESLEE 561

Query: 745 KERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDIN 804
            E+ L+ HSE+LAL FGL+  PS   + I KNLRIC DCH+ IK+ S+V +REIVVRD  
Sbjct: 562 VEQVLFTHSEKLALCFGLMSTPSGSPLHIFKNLRICQDCHSAIKIASKVYKREIVVRDRY 621

Query: 805 RFHHFQHGVCSCGDYW 820
           RFH F+HG CSC DYW
Sbjct: 622 RFHSFKHGSCSCSDYW 637



 Score =  132 bits (332), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 181/391 (46%), Gaps = 52/391 (13%)

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGI--FCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
           F+  +L+  Y  C     AR++FD I    KD V +T ++     +C   ESL+LF QMR
Sbjct: 58  FLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALI----RHCPPFESLKLFIQMR 113

Query: 239 VMGYRPNNYTITAALKSC--LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
                 +   +  AL +C  LG     VG  +H   +K  + +   V   L+ +Y K G 
Sbjct: 114 QFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGL 173

Query: 297 IVDAQ-------------------------------LFFEEMPKKDVIPWSLMIARYAQS 325
           + +A+                               + F+EMP+++ + W++MI  Y  +
Sbjct: 174 VGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGN 233

Query: 326 DRSKEALEL-----FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLD 379
             +KEA  L     F C  + S V    T  SVL AC+    + +G+ +H   +K +GLD
Sbjct: 234 GFTKEAFLLLKEMVFGCGFRLSFV----TLCSVLSACSQSGDVCVGRWVHCYAVKEMGLD 289

Query: 380 SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
             V V  +L+D+YAKCG I  ++ +F    ++N V WN M+ G    G G+ A+++F SM
Sbjct: 290 FGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM 349

Query: 440 IGNDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGR 498
           +  +++P  VTF ++L AC+    ++ G    H L    R   +I     ++ +  + GR
Sbjct: 350 V-EEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGR 408

Query: 499 INDARLTFDKMD-KREEVSWNAMICGYSMHG 528
           + +A +    M     EV   ++I     HG
Sbjct: 409 LEEAEIMVKNMRIPPNEVVLGSLIGSCYAHG 439



 Score =  100 bits (249), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 205/504 (40%), Gaps = 76/504 (15%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRG--APLDLFAHNILLNFYVQFDCLDDASKLFDE 104
           + +LL+Q  +      G+QLH   +  G  +  + F  N LL+ Y        A KLFDE
Sbjct: 23  FRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDE 82

Query: 105 MPLT--NTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           +P +  +++ +  L + C         L + +R F    +    VC       +      
Sbjct: 83  IPQSHKDSVDYTALIRHCPPFESLK--LFIQMRQFDLPLDGVVMVCALNACARLGGGDTK 140

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS--------- 213
           V   +H  V K G      V  +L++ Y   G V  AR++F+GI  + +VS         
Sbjct: 141 VGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLV 200

Query: 214 ----------------------WTGMVGCYAENCFYEESLQLFCQMRV-MGYRPNNYTIT 250
                                 WT M+  Y  N F +E+  L  +M    G+R +  T+ 
Sbjct: 201 KWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLC 260

Query: 251 AALKSCLGLEAFGVGKSVHGCALKAC-YDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK 309
           + L +C       VG+ VH  A+K    D  + VGT L+++YAK G I  A   F  M K
Sbjct: 261 SVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLK 320

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
           ++V+ W+ M+   A     K A+++F  M +  V P+  TF ++L AC+           
Sbjct: 321 RNVVAWNAMLGGLAMHGMGKIAVDMFPSMVE-EVKPDGVTFMALLSACS----------- 368

Query: 370 HSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDG 429
           HS +++ G D      + L  VY    EIE+               +  M+    + G  
Sbjct: 369 HSGLVEKGWD----YFHDLEPVYRIKPEIEH---------------YACMVGLLGRAGRL 409

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTIKTRYNNDIAVANA 488
           E+A  +  +M    + P EV   S++ +C     L  G ++   L      N +  +   
Sbjct: 410 EEAEIMVKNM---RIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHI--V 464

Query: 489 LIDMYAKCGRINDARLTFDKMDKR 512
           L +MYA  G++  A      + KR
Sbjct: 465 LSNMYALSGKVEKANSLRQVLKKR 488



 Score = 57.0 bits (136), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDARLTFDK 508
           F S+LR C+   AL PG Q+H+  I T    + +  + NAL+ +Y  C   + AR  FD+
Sbjct: 23  FRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDE 82

Query: 509 MDK--REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD 566
           + +  ++ V + A+I     H    E+L LF +M+Q +   + +  V  L+AC+  G  D
Sbjct: 83  IPQSHKDSVDYTALI----RHCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGD 138

Query: 567 K--------GQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVM 618
                    G   F  +  D      +  Y    GL+G   K  E +++        SV+
Sbjct: 139 TKVGSQMHVGVVKFGFVKFDKVCNALMNVYV-KFGLVGEARKMFEGIEV-------RSVV 190

Query: 619 VWRALLGACVVQKNIDLGR 637
            W   L   V  ++++ GR
Sbjct: 191 SWSCFLEGLVKWESVESGR 209


>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:35708903-35705786 | 20130731
          Length = 616

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 323/593 (54%), Gaps = 40/593 (6%)

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDI---VDAQLFFEEMPKKDVIPWSLMIAR 321
            K +H    +    Q  YV T LL        I       L F ++   +   +S +I  
Sbjct: 27  AKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRA 86

Query: 322 YAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
           YA++     ++ L+  M  ++V P +FTF+++        L   G Q+H +    G  ++
Sbjct: 87  YARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL---GSQLHLHAFLFGFVND 143

Query: 382 VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
           ++V N ++ +Y K G ++ +  +F E P ++ VTW  +IV Y + GD + A  LF  +  
Sbjct: 144 LYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPV 203

Query: 442 NDM--------------QPT-----------------EVTFSSVLRACAGFAALDPGLQV 470
            DM               P                  E+T    + ACA          +
Sbjct: 204 KDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWI 263

Query: 471 HSLTIKTRYNN--DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
             +   +R+ +  ++ V +ALIDMY+KCG + +A   F  M +    S+++MI G+++HG
Sbjct: 264 REIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHG 323

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
            +  A+ LF +M +   KPN +TFVG+ +ACS+AG++++GQ LF +M + Y + P  +HY
Sbjct: 324 RARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHY 383

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKP 648
            CM  LLGR G  ++A++L+  +P +P+  VW ALLGA  +  N D+    ++ + E++P
Sbjct: 384 ACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEP 443

Query: 649 HDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE-NQGVVHYFSVGDTSH 707
            + G ++LLS  YA+A +WD+V+ VRK M+ K ++K PG SWVE   G++H F  GD  H
Sbjct: 444 DNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKH 503

Query: 708 PDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPS 767
           P+   I   L+ L ++ +  GY P  N+V  D++D+ K   L  HSE+LALA+GLL   +
Sbjct: 504 PEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDA 563

Query: 768 TCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
             +I+I+KNLRIC DCH V+   S++  R+I+VRD  RFHHF +G CSC ++W
Sbjct: 564 GSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616



 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 41/398 (10%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK---LFDEMPLTNTISFVTLA 117
           N  KQLH  I +       +    LL F      +   +    LF ++   N   +  L 
Sbjct: 25  NHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALI 84

Query: 118 QGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQ 177
           +  +R+  F H++ +   +         F  + +  LL +   P +   +H   +  G  
Sbjct: 85  RAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKN---PSLGSQLHLHAFLFGFV 141

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFD-------------------------------GI 206
            D +VG ++I  Y   G +D AR+VFD                               G+
Sbjct: 142 NDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGL 201

Query: 207 FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGK 266
             KDMV+WT MV  Y++N   +++LQ F +MR  G   +  T+  A+ +C  L   G   
Sbjct: 202 PVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYAD 261

Query: 267 SVHGCALKACY--DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
            +   A  + +    +++VG+ L+++Y+K G++ +A   F+ M + +V  +S MI  +A 
Sbjct: 262 WIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAV 321

Query: 325 SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVF 383
             R++ A++LF+ M ++ + PN+ TF  +  AC+   ++  G+Q+   + +  G+     
Sbjct: 322 HGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTAD 381

Query: 384 VSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
               + D+  + G +E ++ L    P E N   W  ++
Sbjct: 382 HYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALL 419


>Medtr3g026690.1 | PPR containing plant-like protein | HC |
           chr3:8195048-8190900 | 20130731
          Length = 944

 Score =  366 bits (940), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/610 (30%), Positives = 341/610 (55%), Gaps = 1/610 (0%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE 142
           N L++ Y +   +  A ++FD M + + +S+ T+  G  ++  +   L ++ ++ +   +
Sbjct: 237 NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVK 296

Query: 143 VNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQV 202
           +N       + ++  M        I+    + G  +D  V T ++  Y+ CG +  AR++
Sbjct: 297 MNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKAREL 356

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
           F  +  +D+V+W+  +    E  +  E L +F  M+  G +P+   ++  +  C  +   
Sbjct: 357 FLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNI 416

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
           G+GK +H  A+KA  + D+ + T L+ +Y +      A   F  M  KD++ W+ +I  +
Sbjct: 417 GLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGF 476

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNV 382
            +      ALE+F+ ++ S ++P++ T   +  ACA    L LG  +H  + K G +S++
Sbjct: 477 TKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDI 536

Query: 383 FVSNALMDVYAKCGEIENSMILFMESPE-QNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
            V  ALMD+YAKCG + +   LF+ +   ++EV+WN MI GY+  G   +A++ F  M  
Sbjct: 537 HVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKL 596

Query: 442 NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIND 501
            +++P  VTF ++L A +  + L   +  H+  I+  + +   + N+LIDMYAKCG++  
Sbjct: 597 ENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRY 656

Query: 502 ARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           +   F +M+ ++ +SWNAM+  Y+MHG    A+ LF+ MQ++N + + ++++ VLSAC +
Sbjct: 657 SEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRH 716

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
           +GL+ +G  +F SM + +++EP +EHY CMV LLG  G FDE + L+ ++  +P   VW 
Sbjct: 717 SGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWG 776

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           ALL AC +  N+ LG     H+L+++P +   HV+LS++YA   RW++    R ++   G
Sbjct: 777 ALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHG 836

Query: 682 VKKEPGLSWV 691
           +KK PG SWV
Sbjct: 837 LKKIPGYSWV 846



 Score =  250 bits (639), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 287/585 (49%), Gaps = 5/585 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  ++  +L+        + G  ++ DI+  G   D++    L++ + +  CLD+A  +F
Sbjct: 98  DKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVF 157

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           D+MP+ + + +  +  G S+S     AL +  R+  EG EV+      +   +  +    
Sbjct: 158 DKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVG 217

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
            C +IH  V +R       V  SLID Y  CG+V +A++VFD +  +D VSW  M+  Y 
Sbjct: 218 CCKSIHGYVVRR--SICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYV 275

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +N  Y E LQL  +MR    + N   +  AL     +     GK ++  AL+     D+ 
Sbjct: 276 KNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIV 335

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V T ++ +YAK G++  A+  F  +  +D++ WS  ++   ++   +E L +F  M+   
Sbjct: 336 VATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEG 395

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           + P+    + ++  C     + LGK +H   +K  ++S++ +   L+ +Y +      +M
Sbjct: 396 LKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAM 455

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            LF     ++ V WNT+I G+ + GD   A+ +F+ +  + + P   T   +  ACA   
Sbjct: 456 TLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMD 515

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRI-NDARLTFDKMDKREEVSWNAMI 521
            LD G  +H    K+ + +DI V  AL+DMYAKCG + +  RL       ++EVSWN MI
Sbjct: 516 DLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMI 575

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY  +G S EA++ F +M+  N +PN +TFV +L A S   +L +  + F +       
Sbjct: 576 AGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMA-FHTCIIRMGF 634

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
             C      ++ +  + G+   + K   E+  + ++  W A+L A
Sbjct: 635 LSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTI-SWNAMLSA 678



 Score =  205 bits (522), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 237/470 (50%), Gaps = 2/470 (0%)

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           F ++   + I + +  +  S+ H F  A+++   + K G + + F    ++K   S    
Sbjct: 56  FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
           H    I+  +   G + D ++GTSLID +   G +D AR VFD +  KD V W  M+   
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           +++    E+L++F +M++ G+  +  +I     +   L   G  KS+HG  ++       
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG-- 233

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V   L+++Y K GD+  AQ  F+ M  +D + W+ M+A Y ++    E L+L H MR+ 
Sbjct: 234 VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRG 293

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
           +V  N     + L   A    L  GK+I++  L++GL S++ V+  ++ +YAKCGE++ +
Sbjct: 294 NVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKA 353

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             LF+    ++ V W+  +   V+ G   + +++F  M    ++P +   S ++  C   
Sbjct: 354 RELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEI 413

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
           + +  G  +H   IK    +DI++   L+ MY +      A   F++M  ++ V WN +I
Sbjct: 414 SNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLI 473

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
            G++ +G    AL +FN++Q +   P+  T VG+ SAC+    LD G  L
Sbjct: 474 NGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCL 523



 Score =  133 bits (334), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 170/328 (51%), Gaps = 10/328 (3%)

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F ++    +I ++  I  Y++     +A+ L+H + +  + P+ FTF  VL+AC + +  
Sbjct: 56  FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
             G  I+ +++  GL+ +V++  +L+D++ K G ++N+  +F + P ++ V WN MI G 
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL-DPGL--QVHSLTIKTRYN 480
            Q  +  +A+ +F  M    M+  EV   S+L      + L D G    +H   ++    
Sbjct: 176 SQSLNPCEALEMFWRM---QMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSIC 232

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
               V+N+LIDMY KCG ++ A+  FD+M  R++VSW  M+ GY  +G   E L L +KM
Sbjct: 233 G--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKM 290

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
           ++ N K NK+  V  L   +    L+KG+ ++    Q   +   I   T +V +  + G+
Sbjct: 291 RRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQ-MGLMSDIVVATPIVCMYAKCGE 349

Query: 601 FDEAVKLIGEIPFQPSVMVWRALLGACV 628
             +A +L   +  +  ++ W A L A V
Sbjct: 350 LKKARELFLSLEGR-DLVAWSAFLSALV 376


>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:18723182-18719939 | 20130731
          Length = 881

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/650 (31%), Positives = 348/650 (53%), Gaps = 5/650 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           +S+++ ++L      +    GK +H   +K GA  D+F    +++ Y +F C+ +A + F
Sbjct: 236 NSYTFPSILTACCALKEMQIGKGVHGLAIKCGAT-DVFVETAIVDLYAKFGCMSEAYRQF 294

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            +M + N +S+  +  G  +      AL +   + + GHE+N +  T+++      +L  
Sbjct: 295 SQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIE 354

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIF-CKDMVSWTGMVGCY 221
               IH+ V K G   +  VG +L++ Y+  G V  +   F  +   KD   W  M+  +
Sbjct: 355 EAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSF 414

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N     +L+LF  M   G +P+ Y I + L     + +  +G  VH   LKA    + 
Sbjct: 415 AQNRNSGRALELFTVMLREGVKPDEYCIGSLLSI---MSSLSLGSQVHSYILKAGLVTNA 471

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            VG  L  +Y+K G + ++   F++   KD + W+ MI+ + +     +AL LF  M   
Sbjct: 472 TVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQ 531

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            VVP++ T  S+L ACA   LL  G++IH +  ++GL +N  V  AL+++Y+KCG +  +
Sbjct: 532 EVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLA 591

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F   P ++    ++++ GY Q G  E++  LF  M+ ND      T +S+L A +  
Sbjct: 592 RKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLL 651

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
              D G Q+H+   K     D++V ++L+ MY+KCG I D R  FD ++K + + W ++I
Sbjct: 652 CQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLI 711

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
             Y+ HG   +AL  +  M+    +P+ +TFVG+LSACS++GL+++      SM +DY I
Sbjct: 712 LSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKI 771

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
            P   HY C+V +LGR G+  EA   I  +P +P+ ++W  LL AC V  + +LG+  A+
Sbjct: 772 TPSHRHYACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACKVHGDFELGKLAAE 831

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
            V+ ++P D G +V  SN+ A  ++W+ V  +R ++ + G+KKEP  S V
Sbjct: 832 KVMGLEPSDVGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEPAWSVV 881



 Score =  236 bits (602), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 262/513 (51%), Gaps = 6/513 (1%)

Query: 64  KQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           K LH  +LK       +F  + L+  Y +   +  A KLFD +   + +S+  +  G  R
Sbjct: 54  KILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVR 113

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
           +  F  +L +  R+   G E + F   +++   V++        + + V K G  +  +V
Sbjct: 114 NSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYV 173

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
            T ++D +    N   A + F+   C ++ SW  ++    +N   + +L LF +M     
Sbjct: 174 QTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASL 233

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
            PN+YT  + L +C  L+   +GK VHG A+K C   D++V T +++LYAK G + +A  
Sbjct: 234 MPNSYTFPSILTACCALKEMQIGKGVHGLAIK-CGATDVFVETAIVDLYAKFGCMSEAYR 292

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
            F +M  ++V+ W+ +I+ + Q D +  AL+LF  MRQ     N +T  SVL ACA   L
Sbjct: 293 QFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPEL 352

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPE-QNEVTWNTMIV 421
           +   KQIHS VLK+GL  NV V  AL+++YAK G +  S + F E    ++   W +M+ 
Sbjct: 353 IEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLS 412

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
            + Q  +  +A+ LF+ M+   ++P E    S+L   +  +      QVHS  +K     
Sbjct: 413 SFAQNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLG---SQVHSYILKAGLVT 469

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           +  V  +L  MY+KCG + ++   F +   ++ VSW +MI G+  HG   +AL LF +M 
Sbjct: 470 NATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEML 529

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
                P+ +T + +L+AC++  LL  G+ +  S
Sbjct: 530 YQEVVPDHITLISILTACADLRLLRTGREIHGS 562



 Score =  225 bits (573), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 290/583 (49%), Gaps = 7/583 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  SY ++L   +  +    G Q+   ++K G     +    +++ + +     +A + F
Sbjct: 135 DEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFF 194

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           ++    N  S+  +     ++ +   AL++   + +     N +   +I+    ++    
Sbjct: 195 NDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEMQ 254

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +H    K G   D FV T+++D Y+  G +  A + F  +  +++VSWT ++  + 
Sbjct: 255 IGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFV 313

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +      +L+LF  MR +G+  N YT+T+ L +C   E     K +H   LK     ++ 
Sbjct: 314 QQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVK 373

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPK-KDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           VG  L+ +YAK G +  ++L F EM   KD   W+ M++ +AQ+  S  ALELF  M + 
Sbjct: 374 VGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLRE 433

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            V P+ +   S+L   ++  L     Q+HS +LK GL +N  V  +L  +Y+KCG +E S
Sbjct: 434 GVKPDEYCIGSLLSIMSSLSLG---SQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEES 490

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F ++  ++ V+W +MI G+V+ G  ++A+ LF  M+  ++ P  +T  S+L ACA  
Sbjct: 491 YEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADL 550

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
             L  G ++H  T +     +  V  AL++MY+KCG ++ AR  FD +  ++  + ++++
Sbjct: 551 RLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLV 610

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY+ +GL  E+  LF+ M + +   +  T   +L A S     D G  L   + +   +
Sbjct: 611 SGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYI-EKLGL 669

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
           +  +   + ++ +  + G  ++  K   ++  +P ++ W +L+
Sbjct: 670 QADVSVGSSLLTMYSKCGSIEDCRKAFDDVE-KPDLIGWTSLI 711



 Score =  204 bits (520), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 253/505 (50%), Gaps = 37/505 (7%)

Query: 167 IHACVYKRGH-QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           +HA + K  + Q+  F   SLI  Y    ++  A ++FD I    +VSW  M+  Y  N 
Sbjct: 56  LHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNS 115

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
            + +SL++FC+M + G+ P+ ++  + L +C+ L+A   G  V    +K  +    YV T
Sbjct: 116 MFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQT 175

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
           ++++++ K+ +  +A  FF +    +V  W+ +I+   ++  ++ AL LF  M ++S++P
Sbjct: 176 QMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMP 235

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N++TF S+L AC A   + +GK +H   +K G  ++VFV  A++D+YAK G +  +   F
Sbjct: 236 NSYTFPSILTACCALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQF 294

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM--IGNDMQPTEVTFSSVLRACAGFAA 463
            +   QN V+W  +I G+VQ  D   A+ LF  M  IG+++    VT  SVL ACA    
Sbjct: 295 SQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVT--SVLSACAKPEL 352

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMIC 522
           ++   Q+HSL +K     ++ V  AL++MYAK G +  + L F +M   ++   W +M+ 
Sbjct: 353 IEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLS 412

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTF-------------VGVLSACSNAGLLDK-- 567
            ++ +  S  AL LF  M +   KP++                  V S    AGL+    
Sbjct: 413 SFAQNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQVHSYILKAGLVTNAT 472

Query: 568 -GQSLFKSMSQDYNIEPCIE-----------HYTCMVGLLGRLGKFDEAVKLIGEIPFQ- 614
            G SLF   S+   +E   E            +  M+      G  D+A++L  E+ +Q 
Sbjct: 473 VGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQE 532

Query: 615 --PSVMVWRALLGACVVQKNIDLGR 637
             P  +   ++L AC   + +  GR
Sbjct: 533 VVPDHITLISILTACADLRLLRTGR 557



 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 242/496 (48%), Gaps = 18/496 (3%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +++++  ++L    +       KQ+H  +LK G  L++     L+N Y +   +  +   
Sbjct: 335 INAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELA 394

Query: 102 FDEMP-LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           F EM  + +   + ++    +++     AL +   + +EG + + +    I  LL  M  
Sbjct: 395 FSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEYC---IGSLLSIMSS 451

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
             +   +H+ + K G   +A VG SL   YS CG ++ + +VF     KD VSW  M+  
Sbjct: 452 LSLGSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISG 511

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           + E+ + +++L+LF +M      P++ T+ + L +C  L     G+ +HG   +     +
Sbjct: 512 FVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTN 571

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
             VG  L+ +Y+K G +  A+  F+ +P KD    S +++ YAQ+   +E+  LFH M +
Sbjct: 572 TVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLR 631

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
           +    + FT  S+L A +      +G Q+H+ + K+GL ++V V ++L+ +Y+KCG IE+
Sbjct: 632 NDETVDAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIED 691

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA- 459
               F +  + + + W ++I+ Y Q G G  A+  +  M    ++P  VTF  +L AC+ 
Sbjct: 692 CRKAFDDVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSH 751

Query: 460 ------GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KR 512
                  F  L+  ++ + +T   R+         ++D+  + GR+ +A    + M  + 
Sbjct: 752 SGLVEEAFFYLNSMIEDYKITPSHRH------YACIVDILGRSGRLREAESFINNMPVEP 805

Query: 513 EEVSWNAMICGYSMHG 528
             + W  ++    +HG
Sbjct: 806 NALIWGTLLAACKVHG 821


>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:44861451-44859606 | 20130731
          Length = 554

 Score =  364 bits (935), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 299/494 (60%), Gaps = 11/494 (2%)

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD 390
           A+ LF  M ++SV  ++FTF  +L+     +L        S + K+G D+N+FV NAL++
Sbjct: 68  AISLFSHMHRNSVPFDHFTFPLILKHHHHHLLH-------SLIFKLGFDTNIFVQNALIN 120

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM-IGN-DMQP-- 446
            Y   G ++ ++ LF E   ++ V+W+T+I   V+     +A+++F  M +G+ D++   
Sbjct: 121 AYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWL 180

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTF 506
                 SV+ A +    ++ G+ VHS  ++      + +  ALI+MY++CG I+ +   F
Sbjct: 181 DRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVF 240

Query: 507 DKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD 566
           D+M +R  V+W A+I G ++HG S EAL +F +M+++  KP+   F+GVL ACS+ GL++
Sbjct: 241 DEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVE 300

Query: 567 KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            G  +F+SM  ++ I+P +EHY CMV LLGR G   EA   + E+P +P+ ++WR LLGA
Sbjct: 301 DGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGA 360

Query: 627 CVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEP 686
           CV   ++ L     + ++E+ P+ DG +VLLSN Y     W   A +R +MK+  + KEP
Sbjct: 361 CVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMKQNRIVKEP 420

Query: 687 GLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKE 746
           GLS+V    VVH F  GD  HP  + I   L  +    +  GY P+ ++VL D++D+EKE
Sbjct: 421 GLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNTSSVLHDIQDEEKE 480

Query: 747 RHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRF 806
             L  HSE+LA+AF LL      +IR++KNLRIC DCH  +K  S +  R+I++RD NRF
Sbjct: 481 HCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHDFMKHASGIFDRDIIIRDRNRF 540

Query: 807 HHFQHGVCSCGDYW 820
           HHF  G+CSC D+W
Sbjct: 541 HHFSKGLCSCQDFW 554



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 148/272 (54%), Gaps = 11/272 (4%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEES 230
           ++K G   + FV  +LI+AY   G++D A ++FD +  +D+VSW+ ++ C  +N    E+
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162

Query: 231 LQLFCQMRVMGYRP-NNYTITAALKSCL-GLEAFGV---GKSVHGCALKACYDQDLYVGT 285
           L +F QM+ MG+R   N+   A + S +  + + GV   G  VH   ++      + +GT
Sbjct: 163 LSVFQQMQ-MGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGT 221

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            L+ +Y++ G I  +   F+EMP+++V+ W+ +I   A   RS+EAL++F+ M++S + P
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKP 281

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           +   F  VL AC+   L+  G ++  ++  + G+   +     ++D+  + G I  +   
Sbjct: 282 DGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDF 341

Query: 405 FMESP-EQNEVTWNTMI---VGYVQLGDGEKA 432
             E P + N V W T++   V +  LG  EKA
Sbjct: 342 VEEMPLKPNSVIWRTLLGACVNHNHLGLAEKA 373



 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 38/273 (13%)

Query: 70  ILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHA 129
           I K G   ++F  N L+N Y     LD A KLFDEM   + +S+ TL     +++    A
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162

Query: 130 LHVILRLFKEGHE-----VNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
           L V  ++ + GH      ++  +  ++I  + S+ +  +   +H+ + + G      +GT
Sbjct: 163 LSVFQQM-QMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGT 221

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           +LI+ YS CG +D + +VFD +  +++V+WT ++   A +    E+L++F +M+  G +P
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKP 281

Query: 245 NNYTITAALKSCL--GL------------EAFGVGKSV--HGCALKACYDQDLYVGTELL 288
           +       L +C   GL            + FG+   +  +GC               ++
Sbjct: 282 DGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGC---------------MV 326

Query: 289 ELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
           +L  ++G I++A  F EEMP K + + W  ++ 
Sbjct: 327 DLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLG 359


>Medtr8g031210.1 | PPR containing plant-like protein | HC |
           chr8:11676602-11671237 | 20130731
          Length = 703

 Score =  364 bits (935), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/678 (32%), Positives = 340/678 (50%), Gaps = 15/678 (2%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           QLH   LK G   D F    L   Y ++  +  A KLF E P       V L     RS+
Sbjct: 22  QLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKT----VYLWNALLRSY 77

Query: 125 QFDHALHVILRLFKEGHEV---------NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRG 175
            F+      L LF +   V         + +  +  +K    +    +   IH  + K  
Sbjct: 78  CFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVR 137

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFC 235
              D FVG++LID Y+ CG ++ A +VF      D+V WT +V  Y ++   E +L  F 
Sbjct: 138 IDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFS 197

Query: 236 QMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKS 294
           +M V     P+  T+ +   +C  L  F +G+SVHG   +   D  L +   LL LY K+
Sbjct: 198 RMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKT 257

Query: 295 GDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
           G I +A   F EM  KD+I WS M A YA +    + L+LF  M    + PN  T  SVL
Sbjct: 258 GSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 317

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
           +ACA    L  G +IH   +  G +    VS ALMD+Y KC   E ++  F   P+++ +
Sbjct: 318 RACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVI 377

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
            W  +  GY   G   ++M +F +M+ +  +P  +    +L   +    L   +  H+  
Sbjct: 378 AWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFV 437

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
           IK  + N+  +  +LI++YAKC  I DA   F  M  ++ V+W+++I  Y  HG   EAL
Sbjct: 438 IKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEAL 497

Query: 535 NLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVG 593
             F +M   ++ KPN +TF+ +LSACS++GL+ +G ++F  M   Y ++P  EHY  MV 
Sbjct: 498 KFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVD 557

Query: 594 LLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGT 653
           LLGR+G+ D A+ LI  +P Q    +W ALLGAC + +NI +G   A+++  +  +  G 
Sbjct: 558 LLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGY 617

Query: 654 HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLI 713
           ++LLSN+Y   + W +   +R+ +K K + K  G S VE +  V  F  GD  H ++  I
Sbjct: 618 YILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHI 677

Query: 714 CAMLEWLNKKTRDAGYVP 731
             +L  L+ K R+  + P
Sbjct: 678 YEILTKLHAKMREVAFDP 695



 Score =  191 bits (484), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 233/489 (47%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA ++F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF 165

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 166 MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ M  CY
Sbjct: 226 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACY 285

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 286 ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 345

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A  FF  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 346 TVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 405

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L      H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 406 GTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 465

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+  F  M   +D +P  VTF S+L AC+ 
Sbjct: 466 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSH 525

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 526 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWG 585

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 586 ALLGACRIH 594


>Medtr8g031210.3 | PPR containing plant-like protein | HC |
           chr8:11673838-11671237 | 20130731
          Length = 703

 Score =  364 bits (935), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/678 (32%), Positives = 340/678 (50%), Gaps = 15/678 (2%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           QLH   LK G   D F    L   Y ++  +  A KLF E P       V L     RS+
Sbjct: 22  QLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKT----VYLWNALLRSY 77

Query: 125 QFDHALHVILRLFKEGHEV---------NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRG 175
            F+      L LF +   V         + +  +  +K    +    +   IH  + K  
Sbjct: 78  CFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVR 137

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFC 235
              D FVG++LID Y+ CG ++ A +VF      D+V WT +V  Y ++   E +L  F 
Sbjct: 138 IDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFS 197

Query: 236 QMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKS 294
           +M V     P+  T+ +   +C  L  F +G+SVHG   +   D  L +   LL LY K+
Sbjct: 198 RMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKT 257

Query: 295 GDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
           G I +A   F EM  KD+I WS M A YA +    + L+LF  M    + PN  T  SVL
Sbjct: 258 GSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 317

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
           +ACA    L  G +IH   +  G +    VS ALMD+Y KC   E ++  F   P+++ +
Sbjct: 318 RACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVI 377

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
            W  +  GY   G   ++M +F +M+ +  +P  +    +L   +    L   +  H+  
Sbjct: 378 AWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFV 437

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
           IK  + N+  +  +LI++YAKC  I DA   F  M  ++ V+W+++I  Y  HG   EAL
Sbjct: 438 IKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEAL 497

Query: 535 NLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVG 593
             F +M   ++ KPN +TF+ +LSACS++GL+ +G ++F  M   Y ++P  EHY  MV 
Sbjct: 498 KFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVD 557

Query: 594 LLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGT 653
           LLGR+G+ D A+ LI  +P Q    +W ALLGAC + +NI +G   A+++  +  +  G 
Sbjct: 558 LLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGY 617

Query: 654 HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLI 713
           ++LLSN+Y   + W +   +R+ +K K + K  G S VE +  V  F  GD  H ++  I
Sbjct: 618 YILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHI 677

Query: 714 CAMLEWLNKKTRDAGYVP 731
             +L  L+ K R+  + P
Sbjct: 678 YEILTKLHAKMREVAFDP 695



 Score =  191 bits (484), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 233/489 (47%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA ++F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF 165

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 166 MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 225

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ M  CY
Sbjct: 226 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACY 285

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 286 ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 345

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A  FF  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 346 TVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 405

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L      H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 406 GTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 465

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+  F  M   +D +P  VTF S+L AC+ 
Sbjct: 466 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSH 525

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 526 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWG 585

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 586 ALLGACRIH 594


>Medtr8g035960.1 | PPR containing plant-like protein | HC |
           chr8:13156718-13159093 | 20130731
          Length = 791

 Score =  364 bits (934), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/680 (32%), Positives = 359/680 (52%), Gaps = 40/680 (5%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G Q+H  ++  G    +   N L+  Y +    + A  +F+ +   + +S+ T+  G  +
Sbjct: 103 GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEK 162

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW--------------TIH 168
           S     AL+    +   G   +P   TT +           CW               +H
Sbjct: 163 SVD---ALNFACFMHLNGVVFDPVTYTTALSF---------CWDRDYWDDHGFLFGLQLH 210

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN--CF 226
           + V K G   + F+G +L+  YS  G +D A +VF+ +  +D+VSW  M+  YA+   C+
Sbjct: 211 SLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECY 270

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
             E++ LF  M   G   ++ ++T A+ +C   +    GK +HG A K  Y   + V   
Sbjct: 271 GLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNV 330

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+  Y+K   + DA+  F++M  ++V+ W+ +I     S   +  + LF+ MR   V PN
Sbjct: 331 LISTYSKCKVLRDAKAVFQDMSARNVVSWTTLI-----SIDEENVVSLFNAMRVDGVYPN 385

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
           + TF  +L A   + ++  G  +H   LK  L S   VSN+L+ +YAK   I+ S  +F 
Sbjct: 386 DVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFE 445

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA--AL 464
           E   Q  ++WN +I GY Q G  ++A   F S I  +++P + TF SVL A A     +L
Sbjct: 446 ELNYQGTISWNALISGYAQNGLCKEAFLTFLSAI-KEIKPNQYTFGSVLNAIAAAEDISL 504

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
             G + HS  IK   N D  VA AL+DMY K G IN+++  F++  ++ + SW  MI  Y
Sbjct: 505 KHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAY 564

Query: 525 SMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC 584
           + HG     ++L+ ++++     + +TF+ VL+AC   G++D G  +F SM + ++IEP 
Sbjct: 565 ARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPT 624

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
            EHY+ MV +LGR+G+ DEA +L+ +IP  P + V ++LLG+C +  N+++       ++
Sbjct: 625 PEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLI 684

Query: 645 EMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGV----VHYF 700
           +M P   G +VL++N+YA    W+ VA VRK M+ +GVKKE G SWV+   V    +H F
Sbjct: 685 QMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFSWVDVANVDSLHLHGF 744

Query: 701 SVGDTSHPDNKLICAMLEWL 720
           S GD SHP+++ I  M E+L
Sbjct: 745 SSGDKSHPESETIDRMAEFL 764



 Score =  162 bits (410), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 191/392 (48%), Gaps = 31/392 (7%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           T+  + K+C G   F +G  +HG  +   +   + V   L+++Y K+G    A   FE +
Sbjct: 88  TLALSFKACRG--EFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGL 145

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL----- 362
              D++ W+ +++ +   ++S +AL     M  + VV +  T+ + L  C  +       
Sbjct: 146 SCPDIVSWNTILSGF---EKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHG 202

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
            + G Q+HS V+K G    VF+ NAL+ +Y++ G ++ +  +F E   ++ V+WN M+ G
Sbjct: 203 FLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSG 262

Query: 423 YVQLGD--GEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
           Y Q G+  G +A+ LF +M+   M    V+ +  + AC     L+ G Q+H L  K  Y 
Sbjct: 263 YAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYG 322

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE-ALNLFNK 539
             +AV N LI  Y+KC  + DA+  F  M  R  VSW  +I       +  E  ++LFN 
Sbjct: 323 THVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLIS------IDEENVVSLFNA 376

Query: 540 MQQTNCKPNKLTFVGVLSACS-----NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
           M+     PN +TF+G+L A +       GL+  G  L   +S + N+         ++ +
Sbjct: 377 MRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVS------NSLITM 430

Query: 595 LGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
             +     E+ K+  E+ +Q ++  W AL+  
Sbjct: 431 YAKFESIQESKKIFEELNYQGTI-SWNALISG 461



 Score =  123 bits (308), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 14/278 (5%)

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN--NFTFASVLQACAAQ 360
            FE++P+ +    +  +  +   +   +AL +F    Q   + N    T A   +AC  +
Sbjct: 40  LFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACRGE 99

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
              ILG QIH  V+  G  S V VSN+LM +Y K G  E ++ +F      + V+WNT++
Sbjct: 100 --FILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTIL 157

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP-----GLQVHSLTI 475
            G+ +  D   A+N    M  N +    VT+++ L  C      D      GLQ+HSL +
Sbjct: 158 SGFEKSVD---ALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVV 214

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG--LSTEA 533
           K  +  ++ + NAL+ MY++ G +++A   F++M  R+ VSWNAM+ GY+  G     EA
Sbjct: 215 KCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEA 274

Query: 534 LNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           + LF  M +     + ++  G +SAC     L+ G+ +
Sbjct: 275 VLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQI 312



 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 182/406 (44%), Gaps = 10/406 (2%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD  S    +      ++   GKQ+H    K G    +   N+L++ Y +   L DA  +
Sbjct: 288 LDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAV 347

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           F +M   N +S+ TL      S   ++ + +   +  +G   N      ++  +   ++ 
Sbjct: 348 FQDMSARNVVSWTTLI-----SIDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMV 402

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
                +H    K    ++  V  SLI  Y+   ++  ++++F+ +  +  +SW  ++  Y
Sbjct: 403 KEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGY 462

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV--GKSVHGCALKACYDQ 279
           A+N   +E+   F    +   +PN YT  + L +    E   +  G+  H   +K   + 
Sbjct: 463 AQNGLCKEAFLTFLSA-IKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNT 521

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           D +V   LL++Y K G+I ++Q  F E P+K    W+ MI+ YA+    +  + L+  + 
Sbjct: 522 DPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIE 581

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIH-SNVLKVGLDSNVFVSNALMDVYAKCGEI 398
           +     ++ TF SVL AC  + ++ +G  I  S V K  ++      + ++D+  + G +
Sbjct: 582 REGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRL 641

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQL-GDGEKAMNLFSSMIGND 443
           + +  L  + P    ++    ++G  +L G+ E A  +  S+I  D
Sbjct: 642 DEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQMD 687


>Medtr3g101700.1 | PPR containing plant-like protein | HC |
           chr3:46826943-46824374 | 20130731
          Length = 729

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/633 (32%), Positives = 342/633 (54%), Gaps = 12/633 (1%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
            +Q+    LKRG    +  H  L++ Y++      A  +FD+M   + +S+  L  G S+
Sbjct: 75  ARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQ 134

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS---MDLPHVCWTIHACVYKRGHQAD 179
           +    HA+ + + + +E  + N    TTI+ LL S    +L     +IH    K G   D
Sbjct: 135 NGYLYHAIQLFVDMLRENFKPNQ---TTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLD 191

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
           + +  +L+  Y+ C +++A++ +FD +  K +VSW  M+G Y +N  +++++  F +M  
Sbjct: 192 SHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLK 251

Query: 240 MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
            G+ P++ TI   + +     AF   ++VH   +K  +  D  V T L+ LYAK G    
Sbjct: 252 EGFHPSSVTIMNLVSA----NAFP--ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNT 305

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A+  ++  P KD+I  + +I+ Y++    + A+E F    Q  + P+      VL     
Sbjct: 306 AKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITN 365

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
                +G   H   +K GL ++  V+N L+ +Y++  EIE ++ LF +  E+  +TWN+M
Sbjct: 366 PSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSM 425

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           I G VQ G    AM LFS M     +P  +T +S+L  C     L  G  +HS  ++   
Sbjct: 426 ISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNV 485

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
             +  +  ALIDMY+KCGR++ A   F  +      +WNA+I GYS++GL   A   ++K
Sbjct: 486 RVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSK 545

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           +Q+   KP+K+TF+GVL+AC++ GL+  G   F  M+++Y + P ++HY C+V LLG+ G
Sbjct: 546 LQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEG 605

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN 659
            F EA++ I ++  QP   VW ALL AC +Q+ + LG   A+ +  +   + G +VL+SN
Sbjct: 606 LFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSN 665

Query: 660 MYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           +YA+  RWD+VA VR+ MK  G     G+S ++
Sbjct: 666 LYAIVGRWDDVARVREMMKDSGGDGCSGVSVID 698



 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 132/242 (54%), Gaps = 10/242 (4%)

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQA---------CAAQVLLILGKQIHSNVLKV 376
           + +  AL +F  + Q++V PN FTF+ +++A         C +   L   +QI +  LK 
Sbjct: 27  NATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKR 85

Query: 377 GLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLF 436
           G++  + V  +L+D+Y K G   ++  +F +   ++ V+WN +I GY Q G    A+ LF
Sbjct: 86  GVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLF 145

Query: 437 SSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
             M+  + +P + T  S+L +C  F  +  G  +H   IK  +  D  + NAL+ MYAKC
Sbjct: 146 VDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKC 205

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
             +  ++L FD+MD++  VSWN MI  Y  +GL  +A+  F +M +    P+ +T + ++
Sbjct: 206 DDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLV 265

Query: 557 SA 558
           SA
Sbjct: 266 SA 267



 Score = 80.1 bits (196), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/325 (20%), Positives = 137/325 (42%), Gaps = 33/325 (10%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+ +   +L       H   G   H   +K G   D    N L++ Y +FD ++ A  LF
Sbjct: 352 DAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLF 411

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            +M     I++ ++  GC ++ +   A+ +   +   G + +     +++     +    
Sbjct: 412 YDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLR 471

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +  T+H+ + +   + + F+GT+LID YS CG +D A +VF  I    + +W  ++  Y+
Sbjct: 472 IGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYS 531

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
                  +   + +++  G +P+  T    L +C            HG          +Y
Sbjct: 532 LYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAAC-----------THGGL--------VY 572

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           +G E   +  K          +  MP   +  ++ ++A   +    KEA+E  + M    
Sbjct: 573 LGLEYFNIMTKE---------YGLMP--SLQHYACIVALLGKEGLFKEAIEFINKME--- 618

Query: 343 VVPNNFTFASVLQACAAQVLLILGK 367
           + P++  + ++L AC  Q  + LG+
Sbjct: 619 IQPDSAVWGALLNACCIQREVKLGE 643


>Medtr3g072900.1 | PPR containing plant-like protein | HC |
           chr3:32815251-32818532 | 20130731
          Length = 745

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/669 (31%), Positives = 363/669 (54%), Gaps = 42/669 (6%)

Query: 55  IQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFV 114
           I+ R     K LH  I+K G    +F  N +++ Y +   + DA  +FDEMP  N +S+ 
Sbjct: 14  IRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWT 73

Query: 115 TLAQGCSRSHQFDHALHVILRLFKEGHE-VNPFVCTTIIK---LLVSMDLPHVCWTIHAC 170
           T+    + S     AL +   + +   E  N F+ + ++K   L+ +++L  +   +H  
Sbjct: 74  TMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKM---VHYH 130

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEES 230
           +++     D  +  +L+D Y  CG++  A++VF  I CK+  SW  ++  YA+    +++
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190

Query: 231 LQLFCQM---------------------RVM---------GYRPNNYTITAALKSCLGLE 260
           ++LF +M                     R +         G + + +T  + LK+C   +
Sbjct: 191 MKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSD 250

Query: 261 AFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP-----W 315
              +G+ +H   +K+ ++   Y  + L+++Y+    + +A   F++  +   +      W
Sbjct: 251 ELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALW 310

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           + M++ +  +    EAL +   M +S V  + +TF+ VL+ C     L L  Q+H  V+ 
Sbjct: 311 NSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVIT 370

Query: 376 VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNL 435
            G + +  V + L+D+YAK G I N++ LF   P+++ V W+++I G  + G  + A +L
Sbjct: 371 SGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSL 430

Query: 436 FSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
           F  MI   +Q      S VL+AC+  A+   G QVHSL +K  Y ++  V  ALIDMYAK
Sbjct: 431 FMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAK 490

Query: 496 CGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGV 555
           CG I DA   F  + + + +SW ++I G + +G + EA++L +KM ++  KPNK+T +GV
Sbjct: 491 CGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGV 550

Query: 556 LSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
           L+AC ++GL+++   +F S+  ++ + PC EHY CMV +LG+ G+F+EAVKLI E+PF+P
Sbjct: 551 LTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKP 610

Query: 616 SVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRK 675
              +W +LLGAC   KN DL    A+H+L   P D   +++LSN+YA    WD+V+ VR+
Sbjct: 611 DKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRE 670

Query: 676 NMKRKGVKK 684
            +K+ G K+
Sbjct: 671 TVKKIGKKR 679



 Score =  217 bits (553), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 169/616 (27%), Positives = 275/616 (44%), Gaps = 81/616 (13%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           Y+A+L+     R+   GK +H  I +    +D+   N LL+ YV+   L DA ++F E+P
Sbjct: 108 YSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIP 167

Query: 107 LTNTISFVTLAQGCSRSHQFD------------------------------HALHVILRL 136
             N  S+ TL  G ++    D                               AL  +  +
Sbjct: 168 CKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMM 227

Query: 137 FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNV 196
             +G +++ F   +++K     D   +   IH  + K G ++  +  ++LID YS C  +
Sbjct: 228 HGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLL 287

Query: 197 DAARQVFDGIFCKDMVS-----WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITA 251
             A ++FD  F    VS     W  M+  +  N  Y E+L +   M   G R + YT + 
Sbjct: 288 SEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSI 347

Query: 252 ALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKD 311
            LK C+  +   +   VHG  + + Y+ D  VG+ L+++YAK G I +A   FE +P KD
Sbjct: 348 VLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKD 407

Query: 312 VIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHS 371
           V+ WS +I   A+    K A  LF  M    +  ++F  + VL+AC++      GKQ+HS
Sbjct: 408 VVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHS 467

Query: 372 NVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEK 431
             LK G +S   V+ AL+D+YAKCG+IE+++ LF    E + ++W ++IVG  Q G  E+
Sbjct: 468 LCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEE 527

Query: 432 AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALID 491
           A++L   MI +  +P ++T   VL AC     ++    V          N I   + LI 
Sbjct: 528 AISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVF---------NSIETNHGLI- 577

Query: 492 MYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLT 551
               C                    +N M+      G   EA+ L ++M     KP+K  
Sbjct: 578 ---PCPE-----------------HYNCMVDILGQAGRFEEAVKLISEMP---FKPDKTI 614

Query: 552 FVGVLSACSNAGLLD----KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKL 607
           +  +L AC      D      + L  +  +D ++   + +    +G+   + K  E VK 
Sbjct: 615 WSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKK 674

Query: 608 IG---------EIPFQ 614
           IG         EIPF+
Sbjct: 675 IGKKRAGKIFYEIPFK 690



 Score =  193 bits (491), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 211/416 (50%), Gaps = 40/416 (9%)

Query: 249 ITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP 308
           I  A + C+   +    KS+H   +K+ +   +++   ++ +Y+K   I+DA+  F+EMP
Sbjct: 6   IQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMP 65

Query: 309 KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV-VPNNFTFASVLQACAAQVLLILGK 367
            ++++ W+ M++    S    EAL L++ M +S +  PN F +++VL+AC     + LGK
Sbjct: 66  HRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGK 125

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
            +H ++ +  LD ++ + NAL+D+Y KCG + ++  +F E P +N  +WNT+I+GY + G
Sbjct: 126 MVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQG 185

Query: 428 DGEKAMNLF------------------------------SSMIGNDMQPTEVTFSSVLRA 457
             + AM LF                              S M G  ++  E TF SVL+A
Sbjct: 186 LIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKA 245

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS- 516
           C     L  G ++H   IK+ + +     +ALIDMY+ C  +++A   FD+  +   VS 
Sbjct: 246 CGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSE 305

Query: 517 ----WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
               WN+M+ G+ ++G   EAL++ + M ++  + +  TF  VL  C N   L     + 
Sbjct: 306 SLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVH 365

Query: 573 K-SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGAC 627
              ++  Y ++  +   + ++ +  + G  + A++L   +P    V+ W +L+  C
Sbjct: 366 GFVITSGYELDCVVG--SILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGC 418



 Score =  159 bits (401), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 231/480 (48%), Gaps = 42/480 (8%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +D  ++ ++L+    +     G+++HC I+K G     +  + L++ Y     L +A+K+
Sbjct: 234 MDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKI 293

Query: 102 FDEMPLTNTIS-----FVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLV 156
           FD+    +++S     + ++  G   +  +  AL +I  + + G   + +  + ++K+ +
Sbjct: 294 FDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICM 353

Query: 157 SMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG 216
           + D   +   +H  V   G++ D  VG+ LID Y+  G+++ A ++F+ +  KD+V+W+ 
Sbjct: 354 NFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSS 413

Query: 217 MVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC 276
           ++   A     + +  LF  M  +G + +++ I+  LK+C  L +   GK VH   LK  
Sbjct: 414 LITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKG 473

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH 336
           Y+ +  V T L+++YAK GDI DA   F  + + D + W+ +I   AQ+ R++EA+ L H
Sbjct: 474 YESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLH 533

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
            M +S   PN  T   VL AC            HS +++   D    V N++        
Sbjct: 534 KMIESGTKPNKITILGVLTACR-----------HSGLVEEAWD----VFNSI-------- 570

Query: 397 EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
           E  + +I     PE     +N M+    Q G  E+A+ L S M     +P +  +SS+L 
Sbjct: 571 ETNHGLI---PCPEH----YNCMVDILGQAGRFEEAVKLISEM---PFKPDKTIWSSLLG 620

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCG---RINDARLTFDKMDKRE 513
           AC  +   D    V    + T    D++V   L ++YA  G    ++  R T  K+ K+ 
Sbjct: 621 ACGTYKNRDLANIVAEHLLATS-PEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKR 679



 Score = 78.6 bits (192), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 36/229 (15%)

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
           D+   ++ F    R C  F ++     +HS  IK+ + N I + N +I +Y+KC  I DA
Sbjct: 2   DLNHIQIAF----RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDA 57

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC-KPNKLTFVGVLSACSN 561
           R  FD+M  R  VSW  M+   +   +  EAL+L+N+M ++   +PN+  +  VL AC  
Sbjct: 58  RNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGL 117

Query: 562 AGLLDKGQSLFKSMSQ---DYNIE-------------------------PCIEHYTCMVG 593
              ++ G+ +   + Q   D +I                          PC    +    
Sbjct: 118 VRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTL 177

Query: 594 LLG--RLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           +LG  + G  D+A+KL  ++P +P ++ W +++   V   +    RF +
Sbjct: 178 ILGYAKQGLIDDAMKLFDKMP-EPDIVSWNSIIAGLVDNASSRALRFVS 225


>Medtr5g043450.1 | PPR containing plant-like protein | HC |
           chr5:19108134-19105482 | 20130731
          Length = 828

 Score =  362 bits (928), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 214/672 (31%), Positives = 353/672 (52%), Gaps = 2/672 (0%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G++LH  ILK G   D      L+  Y +   L DA K+FDEM + + + + ++      
Sbjct: 121 GRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVE 180

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
           +  +   L +   +  EG   +  +  ++ +    +    +  ++H  V + G   D  +
Sbjct: 181 NGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSL 240

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
             SLI  YS CG +  A+++F+ I  +    WT M+  Y +N  +EE+L +F +M+    
Sbjct: 241 SNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEV 300

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALK-ACYDQDLYVGTELLELYAKSGDIVDAQ 301
            PN+ T+ + L SC  L     GKSVH   L+ A     L +G  L++ Y+    +   +
Sbjct: 301 EPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCE 360

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
                +  ++++ W+ +I+ YA+   + EA+  F CM    ++P++F+ AS + A A+  
Sbjct: 361 KLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSG 420

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
            +  G+QIH +V+K G   + FV N+LMD+Y+KCG   ++  +F +   ++ V WN MI 
Sbjct: 421 SIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMIC 479

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
           G+ Q G   +A++LF  M  N ++  +VTF S ++AC+    LD G  +H   I T   N
Sbjct: 480 GFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQN 539

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           D+ +  AL+DMYAKCG +  A+  FD + ++  VSW+ MI  + +HG    A +LF+KM 
Sbjct: 540 DLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMV 599

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKF 601
            +N KPN++TF+ +LSAC +AG + +G+  F +M   Y I P +EH+  +V LL R G  
Sbjct: 600 LSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDI 659

Query: 602 DEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMY 661
           + A ++I  I    +  +W ALL  C +   +D+  + A+ +  +   D G + LLSN+Y
Sbjct: 660 NGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIY 719

Query: 662 AVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLN 721
           A    W     VR  M+  G+KK PG S VE    ++ F  GDTS    K IC  LE   
Sbjct: 720 AEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEICMFLENFQ 779

Query: 722 KKTRDAGYVPDC 733
              ++ G   +C
Sbjct: 780 SLAQEQGSDVEC 791



 Score =  254 bits (649), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 294/587 (50%), Gaps = 33/587 (5%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           QLH  ++      +  A   LL  Y Q   L  +  +F   P  ++  F  L     + H
Sbjct: 19  QLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLI----KCH 74

Query: 125 QFDHALHVILRLFKEGHEVNP-------FVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQ 177
            ++H    +L LF    ++         F+  ++I+ +  +    V   +H  + K G  
Sbjct: 75  LWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFC 134

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
            D  +GTSL+  Y     +  A++VFD +  +D+V W+ ++ CY EN  Y E L++F  M
Sbjct: 135 EDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSM 194

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
              G RP++  + +  ++C  +    + KSVHG  ++     D  +   L+ +Y++ G +
Sbjct: 195 ICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYL 254

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
             A+  FE +  +    W+ MI+ Y Q++  +EAL++F  M+ S V PN+ T  SVL +C
Sbjct: 255 CRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSC 314

Query: 358 AAQVLLILGKQIHSNVLK-----VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN 412
           A    L  GK +H  VL+      GLD    +  AL+D Y+ C ++ +   L      +N
Sbjct: 315 ARLGRLKEGKSVHCFVLRNAMGVTGLD----LGPALIDFYSACWKMSSCEKLLHSIGNEN 370

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
            V+WNT+I  Y + G  ++AM  F+ M+   + P   + +S + A A   ++  G Q+H 
Sbjct: 371 IVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHG 430

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
             +K  + ++  V N+L+DMY+KCG  + A   F+K+  +  V+WN MICG+S +G+S E
Sbjct: 431 HVMKRGFFDEF-VQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVE 489

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM-----SQDYNIEPCIEH 587
           AL+LF++M +   + NK+TF+  + ACSN G LDKG+ +   +       D  I+     
Sbjct: 490 ALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYID----- 544

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
            T +V +  + G    A K+   I  + SV+ W  ++ A  +   I+
Sbjct: 545 -TALVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAAHGIHGQIN 589


>Medtr4g014050.1 | PPR containing plant-like protein | HC |
           chr4:3891221-3897546 | 20130731
          Length = 935

 Score =  360 bits (924), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 210/648 (32%), Positives = 341/648 (52%), Gaps = 6/648 (0%)

Query: 97  DASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF-KEGHEVNPFVCTTIIKLL 155
           +A  +F++M   + IS+  L  G   +   + AL +   ++   G + + FV +  +K  
Sbjct: 102 EARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKAC 161

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
                 +    +H    K G     FV ++L+D Y   G  +    VF+ +  +++VSWT
Sbjct: 162 ALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWT 221

Query: 216 G-MVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
             +VG     C  +  L  F +M       +++T   ALK+         GK++H   +K
Sbjct: 222 AVIVGLVHAGCSLD-GLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIK 280

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
             +++  YV   L  +Y+K          F +M   DV+ W+ +I  Y Q    + AL+ 
Sbjct: 281 QGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDA 340

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAK 394
           F  MR+S V PN +TFASV+ ACA   +   G+QIH + L++GL   + VSN+++ +Y+K
Sbjct: 341 FKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSK 400

Query: 395 CGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSV 454
           CG ++ + ++F     ++ ++W+T+I  Y Q    ++A N  S M     +P E   +SV
Sbjct: 401 CGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASV 460

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           L  C   A L+PG QVH+  +    +++  V +ALI MY++ G + +A   FD +   + 
Sbjct: 461 LSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDI 520

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           VSW AMI GY+ HG S EA++LF  +      P+ +TF+G+L+AC++AGL+D G   +K 
Sbjct: 521 VSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKL 580

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
           M+ +Y I P  EHY C++ LL R G+  EA  ++  +PF    +VW  LL AC    ++D
Sbjct: 581 MTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLD 640

Query: 635 LGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
              + A+ +L + P+  G H+ L+N+Y+ + R +  A VRK MK KGV KEPG SW+ + 
Sbjct: 641 RAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSN 700

Query: 695 GVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVED 742
             ++ F  G  SHP   L  A   +L+ K R A      +  LLD ED
Sbjct: 701 DQLNTFVAGVQSHP---LKDAENTFLSSKKRAAEQELSRDIPLLDEED 745



 Score =  159 bits (402), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 149/285 (52%), Gaps = 1/285 (0%)

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR-QSSVVPN 346
           L+   K G I +A+  F +M  +D I W+ +IA Y  +  S EAL LF  M   S +  +
Sbjct: 91  LKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKD 150

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
            F  +  L+ACA  + +  G+ +H   +K GL ++VFVS+AL+D+Y K G+ E    +F 
Sbjct: 151 QFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFE 210

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
               +N V+W  +IVG V  G     ++ FS M  + +     TF+  L+A A    L  
Sbjct: 211 NMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHY 270

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G  +H+ TIK  +N    V N L  MY+KC + +     F KM   + VSW  +I  Y  
Sbjct: 271 GKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQ 330

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
            G    AL+ F +M++++  PN+ TF  V+SAC+N  +   G+ +
Sbjct: 331 MGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQI 375



 Score =  150 bits (378), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 185/396 (46%), Gaps = 8/396 (2%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           DSH++A  L+ + ++   + GK +H   +K+G     +  N L   Y +    D   +LF
Sbjct: 251 DSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLF 310

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            +M   + +S+  L     +    + AL    R+ K     N +   ++I    ++ +  
Sbjct: 311 GKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITK 370

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
               IH    + G      V  S+I  YS CG +  A  VFDG+  KD++SW+ ++  Y 
Sbjct: 371 WGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYC 430

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +    +E+      M   G +PN + + + L  C  +     GK VH  AL    D +  
Sbjct: 431 QGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETM 490

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V + L+ +Y++SG++ +A   F+ +   D++ W+ MI  YA+   S+EA+ LF  +    
Sbjct: 491 VHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVG 550

Query: 343 VVPNNFTFASVLQACAAQVLLILG---KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
           ++P+  TF  +L AC    L+ LG    ++ +N  ++      +    ++D+  + G + 
Sbjct: 551 LMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY--GCIIDLLCRAGRLS 608

Query: 400 NS--MILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
            +  M+  M  P  ++V W+T++      GD ++A+
Sbjct: 609 EAEHMVRNMPFP-CDDVVWSTLLRACRDHGDLDRAI 643



 Score =  103 bits (257), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 5/241 (2%)

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM-IGNDM 444
           N+ +    K G+I  +  +F +   ++E++W  +I GYV   +  +A+ LFS+M + + +
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147

Query: 445 QPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARL 504
           Q  +   S  L+ACA    +  G  +H  ++K+   N + V++AL+DMY K G+      
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207

Query: 505 TFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGL 564
            F+ M  R  VSW A+I G    G S + L+ F++M ++    +  TF   L A + +GL
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267

Query: 565 LDKGQSLF-KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRAL 623
           L  G+++  +++ Q +N    +     +  +  +  K D  ++L G++   P V+ W  L
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYV--VNTLGTMYSKCRKPDYVMRLFGKMS-TPDVVSWTNL 324

Query: 624 L 624
           +
Sbjct: 325 I 325


>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50925869-50923259 | 20130731
          Length = 710

 Score =  359 bits (922), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 211/650 (32%), Positives = 355/650 (54%), Gaps = 5/650 (0%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           + +LL++   +   +  K+LH  I+  G        + L   Y Q      AS+LFD++P
Sbjct: 15  FESLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKLP 74

Query: 107 LTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEV-NPFVCTTIIKLLVSMDLPHVCW 165
             N  S+ T+ +   +  +   AL++ + +   G  + + F    +IK    +    +  
Sbjct: 75  KRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMGV 134

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV-GCYAEN 224
            +H    K G   ++FV  SL+  Y   G  +AAR VF+ +  + +VSW  ++ G +  N
Sbjct: 135 GVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNN 194

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
           C  E++L+++ +M   G   +  T+ + L++C  L+   +G+ V    L+  Y  ++ V 
Sbjct: 195 C-AEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVR 253

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
             LL++Y K G++ +A+L    M +KDV+ W+ +I  Y  +  ++ AL L   M+   V 
Sbjct: 254 NALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVK 313

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           PN  + AS+L AC   V L  GK +H+  ++  ++S V +  AL+D+YAKC E   S  +
Sbjct: 314 PNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKV 373

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           FM++ ++    WN ++ G+V       A+ LF  M+  ++QP   TF+S+L A A  A L
Sbjct: 374 FMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADL 433

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE--VSWNAMIC 522
              + +H   +K  +   + VA+ L+D+Y+KCG +  A   FD +  +++  + W A+I 
Sbjct: 434 KQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIID 493

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
            Y  HG    A++LFN+M Q+  KPN++TF  VL ACS+AGL+D+G SLF  M + Y + 
Sbjct: 494 AYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVI 553

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH 642
           P ++HYTC+V LLGR G+ ++A  LI  +P   +  VW ALLGACV+ +N++LG   A+ 
Sbjct: 554 PSVDHYTCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACVIHENVELGEIAARW 613

Query: 643 VLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
             E++P + G +VLL+ +YA   RW +   VR  +   G++K P  S VE
Sbjct: 614 TFELEPENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPANSLVE 663


>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:1959596-1956593 | 20130731
          Length = 831

 Score =  358 bits (919), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 199/644 (30%), Positives = 341/644 (52%), Gaps = 47/644 (7%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           N G++ H  +LK G   +++  N LL  Y +    +DA ++F+ +   N ++F T+  G 
Sbjct: 155 NCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGL 214

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC------------WTIH 168
           S+++Q    L +   + ++G  V+    +TI+ +        VC              IH
Sbjct: 215 SQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIH 274

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
               K G + D  +  SL+D Y+  G++D+A  VF+ +    +VSW  M+  Y   C  E
Sbjct: 275 TLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSE 334

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           ++L+ F +M+  GY P++ T    L +C+                               
Sbjct: 335 KALECFQRMQCCGYEPDDVTYINMLTACV------------------------------- 363

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNF 348
               KSGD+   +  F+ M    +I W+ +++ Y QS    EA+ELF  M+     P+  
Sbjct: 364 ----KSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRT 419

Query: 349 TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           T A +L +CA   LL  GKQ+H+   K+G   +V+V+++L++VY+KCG++E S  +F + 
Sbjct: 420 TLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKL 479

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
            E + V WN+MI G+      + A+  F  M      P+E +F+++  +CA  ++L  G 
Sbjct: 480 SELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQ 539

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           Q+H+  IK  Y +++ V ++L++MY KCG +  AR  FD M  +  V+WN MI GY+ +G
Sbjct: 540 QIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNG 599

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
              EA++L+  M  +  KP+ +TFV VL+ACS++ L+D+G  +F SM Q + + P ++HY
Sbjct: 600 YGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHY 659

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKP 648
           TC++  LGR+G+F+E   ++  +P++   +VW  +L +C V  N+ L +  A+ +  + P
Sbjct: 660 TCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNP 719

Query: 649 HDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
            +   +VLL+NMY+   RWD+   VR  M    + K+PG S  E
Sbjct: 720 RNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRSE 763



 Score =  222 bits (565), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 274/573 (47%), Gaps = 79/573 (13%)

Query: 50  LLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTN 109
           LLQ  I N+  ++ K +H  I +     D F  N L++ Y + + +  A  +FD++P  N
Sbjct: 11  LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRL---------------FKEGHEVNPFVCTTIIKL 154
             S+  +     +S+   +A  + L++                K G+E        ++ +
Sbjct: 71  IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130

Query: 155 LVSMDLPHVCWTI-----------------HACVYKRGHQADAFVGTSLIDAYSVCGNVD 197
             S+   H+ +                   H  V K G  ++ +V  +L+  Y+ CG  +
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190

Query: 198 AARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCL 257
            A +VF+GI   + V++T M+G  ++    +E L+LF  M   G   ++ +++  L  C 
Sbjct: 191 DAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICA 250

Query: 258 GLEAFGV------------GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFE 305
              +FGV            GK +H  A+K  +++DL++   LL++YAK+GD+  A+  FE
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310

Query: 306 EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
            + K  V+ W++MI+ Y     S++ALE F  M+     P++ T+ ++L AC     + +
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKV 370

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
           G+QI                         C          M SP    ++WN ++ GY Q
Sbjct: 371 GRQIFD-----------------------C----------MSSPSL--ISWNAILSGYNQ 395

Query: 426 LGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAV 485
             D  +A+ LF  M      P   T + +L +CA    L+ G QVH+++ K  + +D+ V
Sbjct: 396 SADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYV 455

Query: 486 ANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC 545
           A++LI++Y+KCG++  ++  F K+ + + V WN+MI G+S++ L  +AL  F +M+Q   
Sbjct: 456 ASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGF 515

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQD 578
            P++ +F  + S+C+    L +GQ +   + +D
Sbjct: 516 FPSEFSFATIASSCAKLSSLFQGQQIHAQIIKD 548



 Score =  189 bits (481), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 211/432 (48%), Gaps = 52/432 (12%)

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           L+SC+  ++    K +H    +     D ++   L++LY+K   I  A   F+++P K++
Sbjct: 12  LQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNI 71

Query: 313 IPWSLMIARYAQSDRSKEALELFHCM---------------------RQS---------- 341
             ++ +++ + +S+  + A  LF  M                     RQ+          
Sbjct: 72  FSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVY 131

Query: 342 -SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
            SV P++ TFA+V  AC     +  G++ H  VLKVG DSN++VSNAL+ +Y KCG  E+
Sbjct: 132 ESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNED 191

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA- 459
           +  +F    E NEVT+ TM+ G  Q    ++ + LF  M+   +    V+ S++L  CA 
Sbjct: 192 AFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAK 251

Query: 460 -----------GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK 508
                      G +    G Q+H+L +K  +  D+ + N+L+DMYAK G ++ A   F+ 
Sbjct: 252 GVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFEN 311

Query: 509 MDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKG 568
           +DK   VSWN MI GY     S +AL  F +MQ    +P+ +T++ +L+AC  +G +  G
Sbjct: 312 LDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVG 371

Query: 569 QSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ---PSVMVWRALLG 625
           + +F  MS      P +  +  ++    +     EAV+L  ++ FQ   P       +L 
Sbjct: 372 RQIFDCMS-----SPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILS 426

Query: 626 ACVVQKNIDLGR 637
           +C     ++ G+
Sbjct: 427 SCAELGLLEAGK 438



 Score =  177 bits (448), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/532 (24%), Positives = 246/532 (46%), Gaps = 58/532 (10%)

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHA 169
           +++ + L Q C  +     A  +  R+F+     + F+C  +I      DL   C  I +
Sbjct: 5   SLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLI------DLYSKCNQITS 58

Query: 170 C--VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFY 227
              V+ +    + F   +++ A+    N+  A ++F  +  ++ VS   ++    +N + 
Sbjct: 59  AHHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYE 118

Query: 228 EESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
            ++L  +  M V    +P++ T      +C GL+    G+  HG  LK  +D ++YV   
Sbjct: 119 RQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNA 178

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           LL +Y K G   DA   FE + + + + ++ M+   +Q+++ KE LELF  M +  +  +
Sbjct: 179 LLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVD 238

Query: 347 NFTFASVLQACAAQVLLIL------------GKQIHSNVLKVGLDSNVFVSNALMDVYAK 394
           + + +++L  CA  V   +            GKQIH+  +K G + ++ + N+L+D+YAK
Sbjct: 239 SVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAK 298

Query: 395 CGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSV 454
            G+++++  +F    + + V+WN MI GY    D EKA+  F  M     +P +VT+ ++
Sbjct: 299 TGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINM 358

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           L AC                                    K G +   R  FD M     
Sbjct: 359 LTAC-----------------------------------VKSGDVKVGRQIFDCMSSPSL 383

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           +SWNA++ GY+      EA+ LF KMQ     P++ T   +LS+C+  GLL+ G+ +  +
Sbjct: 384 ISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQV-HA 442

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           +SQ       +   + ++ +  + GK + +  +  ++  +  V+ W +++  
Sbjct: 443 VSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLS-ELDVVCWNSMIAG 493



 Score = 94.4 bits (233), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 10/314 (3%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
           Q P D  + A +L    +     AGKQ+H    K G   D++  + L+N Y +   ++ +
Sbjct: 414 QNP-DRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVS 472

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
             +F ++   + + + ++  G S +     AL    R+ + G   + F   TI      +
Sbjct: 473 KHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKL 532

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
                   IHA + K G+  + FVG+SL++ Y  CG+V AAR  FD +  K++V+W  M+
Sbjct: 533 SSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMI 592

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK---A 275
             YA N +  E++ L+  M   G +P++ T  A L +C        G  +    L+    
Sbjct: 593 HGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEV 652

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIAR---YAQSDRSKEA 331
               D Y  T +++   + G   + ++  + MP K D I W ++++    +A    +K A
Sbjct: 653 VPKLDHY--TCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRA 710

Query: 332 LELFHCMRQSSVVP 345
            E  H +   +  P
Sbjct: 711 AEELHRLNPRNSAP 724


>Medtr8g031210.2 | PPR containing plant-like protein | HC |
           chr8:11676602-11671244 | 20130731
          Length = 611

 Score =  353 bits (907), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 195/567 (34%), Positives = 302/567 (53%), Gaps = 2/567 (0%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IH  + K     D FVG++LID Y+ CG ++ A +VF      D+V WT +V  Y ++  
Sbjct: 37  IHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGS 96

Query: 227 YEESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
            E +L  F +M V     P+  T+ +   +C  L  F +G+SVHG   +   D  L +  
Sbjct: 97  PELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLAN 156

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            LL LY K+G I +A   F EM  KD+I WS M A YA +    + L+LF  M    + P
Sbjct: 157 SLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKP 216

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N  T  SVL+ACA    L  G +IH   +  G +    VS ALMD+Y KC   E ++  F
Sbjct: 217 NWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFF 276

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
              P+++ + W  +  GY   G   ++M +F +M+ +  +P  +    +L   +    L 
Sbjct: 277 NRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQ 336

Query: 466 PGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYS 525
             +  H+  IK  + N+  +  +LI++YAKC  I DA   F  M  ++ V+W+++I  Y 
Sbjct: 337 QAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 396

Query: 526 MHGLSTEALNLFNKM-QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC 584
            HG   EAL  F +M   ++ KPN +TF+ +LSACS++GL+ +G ++F  M   Y ++P 
Sbjct: 397 FHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPN 456

Query: 585 IEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVL 644
            EHY  MV LLGR+G+ D A+ LI  +P Q    +W ALLGAC + +NI +G   A+++ 
Sbjct: 457 SEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLF 516

Query: 645 EMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGD 704
            +  +  G ++LLSN+Y   + W +   +R+ +K K + K  G S VE +  V  F  GD
Sbjct: 517 SLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGD 576

Query: 705 TSHPDNKLICAMLEWLNKKTRDAGYVP 731
             H ++  I  +L  L+ K R+  + P
Sbjct: 577 RIHDESDHIYEILTKLHAKMREVAFDP 603



 Score =  221 bits (562), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 187/327 (57%), Gaps = 1/327 (0%)

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
           +P+NY+++ ALKSC GL    +GK +HG   K   D D++VG+ L++LY K G + DA  
Sbjct: 12  KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 71

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS-VVPNNFTFASVLQACAAQV 361
            F E PK DV+ W+ +++ Y QS   + AL  F  M  S  V P+  T  SV  ACA   
Sbjct: 72  VFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 131

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
              LG+ +H  V + GLD+ + ++N+L+ +Y K G I+N+  LF E  +++ ++W+TM  
Sbjct: 132 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFA 191

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
            Y   G     ++LF  M+   ++P  VT  SVLRACA  + L+ G+++H L +   +  
Sbjct: 192 CYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEM 251

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           +  V+ AL+DMY KC     A   F++M K++ ++W  +  GY+ +G+  E++ +F  M 
Sbjct: 252 ETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNML 311

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKG 568
            +  +P+ +  V +L+  S  G+L + 
Sbjct: 312 SSGTRPDAIALVKILTTVSELGILQQA 338



 Score =  191 bits (484), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 233/489 (47%), Gaps = 4/489 (0%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D++S +  L+     R    GK +H  + K     D+F  + L++ Y +   ++DA ++F
Sbjct: 14  DNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF 73

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF-KEGHEVNPFVCTTIIKLLVSMDLP 161
            E P  + + + ++  G  +S   + AL    R+   E    +P    ++      +   
Sbjct: 74  MEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF 133

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +  ++H  V ++G      +  SL+  Y   G++  A  +F  +  KD++SW+ M  CY
Sbjct: 134 KLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACY 193

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
           A+N    + L LF +M     +PN  T+ + L++C  +     G  +H  A+   ++ + 
Sbjct: 194 ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 253

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V T L+++Y K      A  FF  MPKKDVI W+++ + YA +    E++ +F  M  S
Sbjct: 254 TVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 313

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
              P+      +L   +   +L      H+ V+K G ++N F+  +L++VYAKC  IE++
Sbjct: 314 GTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 373

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAG 460
             +F     ++ VTW+++I  Y   G GE+A+  F  M   +D +P  VTF S+L AC+ 
Sbjct: 374 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSH 433

Query: 461 FAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WN 518
              +  G+ +  + + K +   +      ++D+  + G ++ A    + M  +     W 
Sbjct: 434 SGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWG 493

Query: 519 AMICGYSMH 527
           A++    +H
Sbjct: 494 ALLGACRIH 502



 Score =  164 bits (415), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 158/283 (55%), Gaps = 3/283 (1%)

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           P+N++ +  L++CA    L+LGK IH  + KV +D+++FV +AL+D+Y KCG++ +++ +
Sbjct: 13  PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 72

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGFAA 463
           FME P+ + V W +++ GY Q G  E A+  FS M+ ++ + P  VT  SV  ACA  + 
Sbjct: 73  FMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 132

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
              G  VH    +   +N + +AN+L+ +Y K G I +A   F +M  ++ +SW+ M   
Sbjct: 133 FKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFAC 192

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           Y+ +G  T+ L+LF +M     KPN +T V VL AC+    L++G  + + ++ +Y  E 
Sbjct: 193 YADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE-LAVNYGFEM 251

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
                T ++ +  +    ++AV     +P +  V+ W  L   
Sbjct: 252 ETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 293


>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:11695650-11697815 | 20130731
          Length = 446

 Score =  348 bits (893), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 168/446 (37%), Positives = 271/446 (60%), Gaps = 1/446 (0%)

Query: 376 VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNL 435
           +GL+ +V V N+L+++Y KCGEI+N+  +F    E++  +W+ +I  +  +    + + L
Sbjct: 1   MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 60

Query: 436 FSSMIGNDM-QPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYA 494
              M      +  E T  +VL AC    + D G  +H + ++     ++ V  +LIDMY 
Sbjct: 61  LGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYV 120

Query: 495 KCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVG 554
           K G +      F  M ++   S+  MI G ++HG   EAL +F++M +    P+ + +VG
Sbjct: 121 KSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVG 180

Query: 555 VLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ 614
           V SACS+AGL+++G   FKSM  ++ IEP ++HY CMV LLGR G   EA +LI  +  +
Sbjct: 181 VFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIK 240

Query: 615 PSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVR 674
           P+ ++WR+LL AC V  N+++G+  A+++  +  ++ G +++L+NMYA A++WD+VA +R
Sbjct: 241 PNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIR 300

Query: 675 KNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCN 734
             +  + + + PG S +E +  V+ F   D S P   +I  M+  +  + +  GY+PD +
Sbjct: 301 TKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTS 360

Query: 735 AVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVV 794
            VLLDV+D+EK+  L  HS++LA+AFGL+       +RI +NLR+C DCHT  K IS + 
Sbjct: 361 QVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIY 420

Query: 795 QREIVVRDINRFHHFQHGVCSCGDYW 820
           +REI VRD  RFHHF++G CSC DYW
Sbjct: 421 EREITVRDRLRFHHFKNGSCSCKDYW 446



 Score =  105 bits (263), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 35/339 (10%)

Query: 175 GHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLF 234
           G + D  V  SLI+ Y  CG +  A  VF+G+  K + SW+ ++G +A    + E L L 
Sbjct: 2   GLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLL 61

Query: 235 CQMRVMGY-RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
            +M   G  R    T+   L +C  L +  +GK +HG  L+   + ++ V T L+++Y K
Sbjct: 62  GKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVK 121

Query: 294 SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASV 353
           SG +      F+ M +K+   +++MI+  A   R KEAL++F  M +  + P++  +  V
Sbjct: 122 SGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGV 181

Query: 354 LQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNE 413
             AC+           H+ +++ GL    F S                 + F    E   
Sbjct: 182 FSACS-----------HAGLVEEGL--QCFKS-----------------MQFEHKIEPTV 211

Query: 414 VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSL 473
             +  M+    + G  ++A  L  SM    ++P +V + S+L AC     L+ G ++ + 
Sbjct: 212 QHYGCMVDLLGRFGMLKEAYELIKSM---SIKPNDVIWRSLLSACKVHHNLEIG-KIAAE 267

Query: 474 TIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
            +     N+      L +MYAK  + +D      K+ +R
Sbjct: 268 NLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAER 306



 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 3/253 (1%)

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           + D+ V   L+ +Y K G+I +A   F  M +K V  WS +I  +A  +   E L L   
Sbjct: 4   EGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGK 63

Query: 338 MR-QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
           M  +        T  +VL AC       LGK IH  +L+   + NV V  +L+D+Y K G
Sbjct: 64  MSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSG 123

Query: 397 EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
            +E  + +F    E+N  ++  MI G    G G++A+ +FS MI   + P +V +  V  
Sbjct: 124 CLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFS 183

Query: 457 ACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREE 514
           AC+    ++ GLQ   S+  + +    +     ++D+  + G + +A      M  K  +
Sbjct: 184 ACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPND 243

Query: 515 VSWNAMICGYSMH 527
           V W +++    +H
Sbjct: 244 VIWRSLLSACKVH 256



 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 136/344 (39%), Gaps = 39/344 (11%)

Query: 74  GAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVI 133
           G   D+   N L+N Y +   + +A  +F+ M   +  S+  +    +    ++  L ++
Sbjct: 2   GLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLL 61

Query: 134 LRLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSV 192
            ++  EG   V       ++     +  P +   IH  + +   + +  V TSLID Y  
Sbjct: 62  GKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVK 121

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G ++   +VF  +  K+  S+T M+   A +   +E+L++F +M   G  P++      
Sbjct: 122 SGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGV 181

Query: 253 LKSC--LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
             +C   GL   G+           C+                        + FE   + 
Sbjct: 182 FSACSHAGLVEEGL----------QCF----------------------KSMQFEHKIEP 209

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
            V  +  M+    +    KEA EL   M   S+ PN+  + S+L AC     L +GK   
Sbjct: 210 TVQHYGCMVDLLGRFGMLKEAYELIKSM---SIKPNDVIWRSLLSACKVHHNLEIGKIAA 266

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
            N+  +   +N      L ++YAK  + ++   +  +  E+N V
Sbjct: 267 ENLFMLN-QNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLV 309


>Medtr7g093900.2 | PPR containing plant-like protein | HC |
           chr7:37366165-37359102 | 20130731
          Length = 663

 Score =  348 bits (893), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 198/570 (34%), Positives = 301/570 (52%), Gaps = 34/570 (5%)

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAAL 253
           G++  A  +F+ +   +   W  M+  Y        +   F  M  +    ++ +   AL
Sbjct: 92  GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFAL 151

Query: 254 KSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVI 313
           K+C   E    G+SV+    K  +D +L V   L+  YA+ G + +A+  F+E   KDV+
Sbjct: 152 KACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVV 211

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI  YA  D S+EA+E+F  M  S V PN  T  +V+ AC+    L +GK++H  V
Sbjct: 212 TWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 271

Query: 374 LKVGLDSNVFVSNALMDV-------------------------------YAKCGEIENSM 402
            +  +  ++ + NAL+D+                               YAKCG++E++ 
Sbjct: 272 EEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESAR 331

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
             F ++P +N V W+ MI GY Q    ++++ LF  M+   + P E T  SVL AC    
Sbjct: 332 RFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLT 391

Query: 463 ALDPGLQVHSLTIKTRYNN-DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            L+ G  +H   +  +     + + NA++DMYAKCG I+ A   F  M +R  +SWN MI
Sbjct: 392 CLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMI 451

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY+ +G + +A+N+F++M+    +PN +TFV +L+ACS+ GL+ +G+  F +M + Y I
Sbjct: 452 AGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGI 511

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           +P   HY CMV LLGR G  +EA KLI  +P QP    W ALL AC +  N++L R  A 
Sbjct: 512 KPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAH 571

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
           ++L + P D G +VLL+N  A  ++W +V  VR  MK KGVKK PG S +E  G    F 
Sbjct: 572 NLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFL 631

Query: 702 VGDTSHPDNKLICAMLE--WLNKKTRDAGY 729
           V D SHP ++ I  +LE   L  K  D  Y
Sbjct: 632 VADESHPQSEEIYKVLEEILLLSKLEDYSY 661



 Score =  159 bits (401), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 32/366 (8%)

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFA 351
           A SGD+  A   F  + + +   W+ MI  Y  + +   A   F  M Q  V  ++ +F 
Sbjct: 89  AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFV 148

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
             L+AC     +  G+ ++  V K+G D  + V N L+  YA+ G ++N+  +F ES ++
Sbjct: 149 FALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDK 208

Query: 412 NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVH 471
           + VTW TMI GY      E+AM +F  M+ + ++P EVT  +V+ AC+    L+ G +VH
Sbjct: 209 DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVH 268

Query: 472 SLTIKTRYNNDIAVANALIDM-------------------------------YAKCGRIN 500
               +      +++ NAL+DM                               YAKCG + 
Sbjct: 269 EKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLE 328

Query: 501 DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
            AR  FD+  ++  V W+AMI GYS +    E+L LF++M +    P + T V VLSAC 
Sbjct: 329 SARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACG 388

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
               L+ G  + +       I   +     +V +  + G  D A ++   +P + +++ W
Sbjct: 389 QLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP-ERNLISW 447

Query: 621 RALLGA 626
             ++  
Sbjct: 448 NTMIAG 453



 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 34/413 (8%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +DS S+   L+   Q      G+ ++C + K G   +L   N L++FY +   L +A ++
Sbjct: 142 MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 201

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FDE    + +++ T+  G +     + A+ V   +     E N      ++     M   
Sbjct: 202 FDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL 261

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +   +H  V ++  +    +  +L+D Y  C  +  AR++FD +  KD+ SWT MV  Y
Sbjct: 262 EMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGY 321

Query: 222 A-------------------------------ENCFYEESLQLFCQMRVMGYRPNNYTIT 250
           A                               +N   +ESL+LF +M   G  P  +T+ 
Sbjct: 322 AKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLV 381

Query: 251 AALKSCLGLEAFGVGKSVHG-CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK 309
           + L +C  L    +G  +H    +       + +   ++++YAK G I  A   F  MP+
Sbjct: 382 SVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPE 441

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
           +++I W+ MIA YA + R+K+A+ +F  MR     PNN TF S+L AC+   L+  G++ 
Sbjct: 442 RNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREY 501

Query: 370 HSNV-LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN-EVTWNTMI 420
             N+  K G+         ++D+  + G +E +  L    P Q  E  W  ++
Sbjct: 502 FDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALL 554



 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 123/239 (51%), Gaps = 6/239 (2%)

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD--VYAKCGEI 398
           ++V+  N T   ++++C+    L   KQI + +   G+ ++ F  + ++     A  G++
Sbjct: 39  TNVIITNPTLL-IMESCSTMRQL---KQIQARMTLTGIITHAFPVSRVIAFCALAHSGDL 94

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC 458
             +  +F    + N   WNTMI GY        A + F  M    ++    +F   L+AC
Sbjct: 95  HYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKAC 154

Query: 459 AGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWN 518
             F  +  G  V+ +  K  ++ ++ V N LI  YA+ G + +AR  FD+   ++ V+W 
Sbjct: 155 QQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWT 214

Query: 519 AMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
            MI GY+ H  S EA+ +F  M  ++ +PN++T + V+SACS+ G L+ G+ + + + +
Sbjct: 215 TMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEE 273


>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:14170762-14173219 | 20130731
          Length = 503

 Score =  348 bits (893), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/440 (39%), Positives = 267/440 (60%), Gaps = 3/440 (0%)

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI 440
           N+F  N +++   K GE + +  +F + P ++ VTWNT+I GYV+      A+++F  M+
Sbjct: 67  NLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVML 126

Query: 441 GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIN 500
              ++P   TF+SV+  CA   +      VH L ++ +   +  +  AL+DMYAKCGR++
Sbjct: 127 KAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVD 186

Query: 501 DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
            ++  F+ + +     WNAMI G ++HG + +A  +F++M+  N  P+ +TFVG+L  CS
Sbjct: 187 VSKEVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGCS 246

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
           + GL++ G+  F+ M   + I+P ++HY  MV LLGR G  +EA  +I  +  +P V++W
Sbjct: 247 HCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIW 306

Query: 621 RALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRK 680
           R+LL AC +    +LG F   ++  +   + G  VLLSNMY   K W     VR  MK+ 
Sbjct: 307 RSLLSACRIHGKKELGEFAIANISRL---ESGDFVLLSNMYCSFKNWHGAERVRHMMKKG 363

Query: 681 GVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 740
           GV+K+ G SW+E  G +H F+  D SH + K I  +LE L ++ +  G+ P    VL+DV
Sbjct: 364 GVRKKRGKSWIELGGSIHQFNAADQSHAEMKAIYRVLEGLMQRAKLEGFTPLTELVLMDV 423

Query: 741 EDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVV 800
            ++EKE +L  HSE+LALA+G+L+      I I KNLRIC DCH  IK++S ++ REI+V
Sbjct: 424 SEEEKEANLTFHSEKLALAYGVLKSSPGTKITISKNLRICQDCHNWIKIVSRILNREIIV 483

Query: 801 RDINRFHHFQHGVCSCGDYW 820
           RD  RFH F+ G CSCGDYW
Sbjct: 484 RDRIRFHQFEGGCCSCGDYW 503



 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 4/245 (1%)

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           ++E   KSG+   A+  F++MP +DV+ W+ +I  Y ++ R  +AL +F  M ++ V P+
Sbjct: 74  VIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPD 133

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
            FTFASV+  CA        K +H  +++  ++ N  ++ AL+D+YAKCG ++ S  +F 
Sbjct: 134 GFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFE 193

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
                +   WN MI G    G    A  +FS M   ++ P  VTF  +L+ C+    ++ 
Sbjct: 194 CVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEV 253

Query: 467 GLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICG 523
           G +   + ++ R+     +     ++D+  + G + +A      M    +V  W +++  
Sbjct: 254 GRKYFEM-MQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSLLSA 312

Query: 524 YSMHG 528
             +HG
Sbjct: 313 CRIHG 317



 Score = 91.3 bits (225), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 4/238 (1%)

Query: 186 LIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPN 245
           +I++    G  D A++VFD +  +D+V+W  ++G Y +N  + ++L +F  M      P+
Sbjct: 74  VIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPD 133

Query: 246 NYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFE 305
            +T  + +  C  L +F   K VHG  ++   + +  +   L+++YAK G +  ++  FE
Sbjct: 134 GFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFE 193

Query: 306 EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
            + +  V  W+ MI   A    + +A  +F  M   +V+P++ TF  +L+ C+   L+ +
Sbjct: 194 CVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEV 253

Query: 366 GKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIEN--SMILFMESPEQNEVTWNTMI 420
           G++    +  +  +   +     ++D+  + G +E   SMI  M S E + V W +++
Sbjct: 254 GRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAM-SVEPDVVIWRSLL 310



 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 127/277 (45%), Gaps = 12/277 (4%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPL 107
           A+L+      + PN    +   ++      +LF  N+++   V+    D A K+FD+MP+
Sbjct: 43  ASLISTYAHCQQPNIAHHVFSRVM------NLFNMNLVIESLVKSGECDIAKKVFDKMPV 96

Query: 108 TNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DLPHVCWT 166
            + +++ T+  G  ++ +F  AL +   + K   E + F   +++     +    +  W 
Sbjct: 97  RDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNAKW- 155

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H  + ++  + +  +  +L+D Y+ CG VD +++VF+ +    +  W  M+   A +  
Sbjct: 156 VHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGH 215

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL--YVG 284
             ++  +F +M V    P++ T    LK C       VG+          + Q    + G
Sbjct: 216 ALDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYG 275

Query: 285 TELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
           T +++L  ++G + +A    + M  + DV+ W  +++
Sbjct: 276 T-MVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSLLS 311


>Medtr5g008690.1 | PPR containing plant-like protein | HC |
           chr5:1878296-1873339 | 20130731
          Length = 764

 Score =  348 bits (892), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/615 (31%), Positives = 328/615 (53%), Gaps = 37/615 (6%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA +   G   +  + + LI+ Y+    +  A+ V +     D + W  ++  Y +NC 
Sbjct: 114 IHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCL 173

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           +E+++ ++ +M   G  P++YT  + LK+C  L  +  G +VH    ++     L+V   
Sbjct: 174 FEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNA 233

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+ +Y + G +  A+  F+ MP +D + W+ MI+ YA      EA  LF CMR++ +  N
Sbjct: 234 LVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERN 293

Query: 347 NFTFASV----------------------------------LQACAAQVLLILGKQIHSN 372
              + ++                                  L AC+    + LGK+IH +
Sbjct: 294 IIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGH 353

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
            ++   D    V N L+ +Y++C ++ ++ +LF +  E+  +TWN M+ G+  +   E+ 
Sbjct: 354 AVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEV 413

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK--TRYNNDIAVANALI 490
             L   M+   ++P  VT +S+L  CA  A L  G + H   +K   ++   + + N+L+
Sbjct: 414 SFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLV 473

Query: 491 DMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKL 550
           +MY++ G++ +AR  FD + +++EV++ +MI GY + G    AL LF +M++ N KP+ +
Sbjct: 474 EMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHV 533

Query: 551 TFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGE 610
           T V VL ACS++GL+ +GQ LF+ M + Y I+P +EHY+CMV L GR G  D+A ++I  
Sbjct: 534 TMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITG 593

Query: 611 IPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNV 670
           +  +P+  +W  L+GAC +  N  +G + A  +LEMKP   G ++L++NMYA A R D  
Sbjct: 594 MSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKE 653

Query: 671 ASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYV 730
           A  R  M+  G K+ PG +WV+    +  F  GDTS+P +  I  M++ LN   +DAGY 
Sbjct: 654 AEARTYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMKDAGYA 713

Query: 731 PDCNAVLLDVEDDEK 745
           P    V+   ED E+
Sbjct: 714 PS-EGVVSSEEDFEE 727



 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 234/511 (45%), Gaps = 52/511 (10%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA------SKLFDEMPLTNTISFVTL 116
           GKQ+H  I+  G   +    + L+NFY   D L DA      S  FD +     IS    
Sbjct: 111 GKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYV- 169

Query: 117 AQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGH 176
                ++  F+ A+ V  R+  +G   + +   +++K    +        +H  + +   
Sbjct: 170 -----KNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSI 224

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           +   FV  +L+  Y   G ++ AR++FD +  +D VSW  M+ CYA    ++E+ +LF  
Sbjct: 225 KWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGC 284

Query: 237 MRVMGYRPN----------------------------------NYTITAALKSCLGLEAF 262
           MR  G   N                                  +  +   L +C  + A 
Sbjct: 285 MREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAV 344

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
            +GK +HG A++ C+D    V   L+ +Y++  D+  A L F ++ +K +I W+ M++ +
Sbjct: 345 KLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGF 404

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV--GLDS 380
           A  DRS+E   L   M +  V PN  T AS+L  CA    L  GK+ H  ++K       
Sbjct: 405 AHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKG 464

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI 440
            + + N+L+++Y++ G++  +  +F     ++EVT+ +MI+GY   GDGE A+ LF+ M 
Sbjct: 465 YLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMR 524

Query: 441 GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA--NALIDMYAKCGR 498
             +++P  VT  +VL AC+    +  G QV    +   Y  D  V   + ++D++ + G 
Sbjct: 525 RLNIKPDHVTMVAVLIACSHSGLVAQG-QVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGL 583

Query: 499 INDARLTFDKMD-KREEVSWNAMICGYSMHG 528
           ++ A+     M  K     W  +I    +HG
Sbjct: 584 LDKAKEVITGMSCKPTSAIWATLIGACKIHG 614



 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 200/436 (45%), Gaps = 36/436 (8%)

Query: 249 ITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP 308
           I   L  C  L++   GK +H   +     Q+  + ++L+  YA    + DAQ+  E   
Sbjct: 95  IKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSN 154

Query: 309 KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQ 368
             D + W+++I+ Y ++   ++A+ ++  M    V+P+++T+ SVL+AC   +    G  
Sbjct: 155 SFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVA 214

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGD 428
           +H  + +  +  ++FV NAL+ +Y + G++E +  LF   P +++V+WNTMI  Y   G 
Sbjct: 215 VHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGL 274

Query: 429 GEKAMNLFSSMIGNDMQPTEVTFSSV---------------------------------- 454
            ++A  LF  M    ++   + ++++                                  
Sbjct: 275 WDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVG 334

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           L AC+   A+  G ++H   ++T ++    V N LI MY++C  +N A L F K+D++  
Sbjct: 335 LNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGL 394

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           ++WNAM+ G++    S E   L  +M +   +PN +T   +L  C+    L  G+     
Sbjct: 395 ITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCY 454

Query: 575 M-SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV-QKN 632
           M  ++   +  +  +  +V +  R GK  EA K+   +  +  V     ++G  V     
Sbjct: 455 MVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGE 514

Query: 633 IDLGRFCAQHVLEMKP 648
             L  F     L +KP
Sbjct: 515 TALKLFAEMRRLNIKP 530



 Score =  124 bits (310), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 194/416 (46%), Gaps = 38/416 (9%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D ++Y ++L+   +    ++G  +H  I +      LF HN L+  Y +F  L+ A +LF
Sbjct: 192 DDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELF 251

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTI----------- 151
           D MP  + +S+ T+    +    +D A  +   + + G E N  +  TI           
Sbjct: 252 DIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFK 311

Query: 152 --------IKLLVSMDLPHVCWTIHACVY---------KRGHQA----DAF--VGTSLID 188
                   ++ ++ +D   +   ++AC +           GH      D F  V  +LI 
Sbjct: 312 GALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLIT 371

Query: 189 AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYT 248
            YS C +++ A  +F  I  K +++W  M+  +A     EE   L  +M   G  PN  T
Sbjct: 372 MYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVT 431

Query: 249 ITAALKSCLGLEAFGVGKSVHGCALK--ACYDQDLYVGTELLELYAKSGDIVDAQLFFEE 306
           I + L  C  +     GK  H   +K    +   L +   L+E+Y++SG +++A+  F+ 
Sbjct: 432 IASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDS 491

Query: 307 MPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILG 366
           + +KD + ++ MI  Y  S   + AL+LF  MR+ ++ P++ T  +VL AC+   L+  G
Sbjct: 492 LSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQG 551

Query: 367 KQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSM-ILFMESPEQNEVTWNTMI 420
           + +   +++V G+D  V   + ++D++ + G ++ +  ++   S +     W T+I
Sbjct: 552 QVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLI 607


>Medtr1g067280.1 | PPR containing plant-like protein | HC |
           chr1:28986458-28983697 | 20130731
          Length = 684

 Score =  345 bits (886), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 194/606 (32%), Positives = 320/606 (52%), Gaps = 43/606 (7%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HA  +      D F+ T LI  Y+    +  AR VFD I  K+  SW  M+  Y     
Sbjct: 71  LHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSL 130

Query: 227 YEESLQLFCQMRVM---GYRPNNYTITAALKSCLGLEA---FGVGKSVHGCALKACYDQD 280
           + ++L LF            P+N+T+T+ LK+ L L +   +   K +H  AL   +  D
Sbjct: 131 FNDALSLFASFVSSTDNNVSPDNFTMTSILKT-LALSSSVCYKSAKQIHCSALLRGFYSD 189

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM-- 338
           + V   L+  Y + G I  A+  F+EM ++D++ W+ MI  Y+QS   +E   L+  M  
Sbjct: 190 VCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLG 249

Query: 339 -RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
                ++PN  T  SV+QAC     L  G ++H  +   G++++VF+ NA++ +YAKCG 
Sbjct: 250 LEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGS 309

Query: 398 IENSMILFMESPEQNEV-------------------------------TWNTMIVGYVQL 426
           +  +  LF E  E++EV                               TWN +I G VQ 
Sbjct: 310 LNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQN 369

Query: 427 GDGEKAMNLFSSM--IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
              E+A++L   M   G +++P  VT SS++   + F+ L    +VH   I+  Y+ +I 
Sbjct: 370 NQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIY 429

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
           VA A++D YAK G I+ AR  FD+   R  + W ++I  Y+ HG ++ AL L+N+M    
Sbjct: 430 VATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRG 489

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
            +P+ +T   VL+AC+++GL+++   +F +M   + I+P +EHY CMVG+L R GK  EA
Sbjct: 490 IQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMVGVLSRAGKLSEA 549

Query: 605 VKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVA 664
            K I ++PF+P+  VW ALL    +  ++++G+F   H+ E++P   G +++++N+Y+ A
Sbjct: 550 EKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFACDHLFEIEPEHTGNYIIMANLYSRA 609

Query: 665 KRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKT 724
            RW+    +R+ M++ G  K  G SW+E  G +  F   D S+  +  I A+L+ L    
Sbjct: 610 GRWEEARKIRERMEKTGSPKIRGSSWIETSGKLLGFIAKDMSNEMSDEIYALLKGLLGLM 669

Query: 725 RDAGYV 730
           R+ GY+
Sbjct: 670 REEGYI 675



 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 249/531 (46%), Gaps = 47/531 (8%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD  +Y + +Q    +R    GKQLH          D F    L+ FY + + + +A  +
Sbjct: 47  LDIAAYGSAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNV 106

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKE-GHEVNP--FVCTTIIKLLVSM 158
           FD++P  N+ S+ ++    +    F+ AL +         + V+P  F  T+I+K L   
Sbjct: 107 FDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALS 166

Query: 159 DLPHVCWT----IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
               VC+     IH     RG  +D  V  +L+  Y  CG ++ AR+VFD +  +D+V+W
Sbjct: 167 S--SVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTW 224

Query: 215 TGMVGCYAENCFYEESLQLFCQMRVM---GYRPNNYTITAALKSCLGLEAFGVGKSVHGC 271
             M+G Y+++ FYEE  +L+ +M  +   G  PN  TI + +++C   +    G  VH  
Sbjct: 225 NAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRF 284

Query: 272 ALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY--------- 322
                 + D+++   ++ +YAK G +  A+  F+EM +KD + +  +I+ Y         
Sbjct: 285 MKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEA 344

Query: 323 ----------------------AQSDRSKEALELFHCMRQS--SVVPNNFTFASVLQACA 358
                                  Q+++ + AL+L   M     ++ PN  T +S++   +
Sbjct: 345 LDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFS 404

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
               L   K++H   ++   D N++V+ A++D YAK G I  +  +F +S  ++ + W +
Sbjct: 405 YFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTS 464

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTIKT 477
           +I  Y   GD   A+ L++ M+   +QP  VT +SVL ACA    ++    V +++  K 
Sbjct: 465 IIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKH 524

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
                +     ++ + ++ G++++A     KM        W A++ G S++
Sbjct: 525 GIQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIY 575



 Score =  177 bits (450), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 180/354 (50%), Gaps = 13/354 (3%)

Query: 251 AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
           +A++ C        GK +H          D ++ T+L+  YAKS  I +A+  F+++P K
Sbjct: 54  SAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHK 113

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSS---VVPNNFTFASVLQ--ACAAQVLLIL 365
           +   W+ MI  Y       +AL LF     S+   V P+NFT  S+L+  A ++ V    
Sbjct: 114 NSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKS 173

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
            KQIH + L  G  S+V V NAL+  Y +CG IE +  +F E  E++ VTWN MI GY Q
Sbjct: 174 AKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQ 233

Query: 426 LGDGEKAMNLFSSMI---GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
            G  E+   L+  M+   G  + P  VT  SV++AC     L  G++VH          D
Sbjct: 234 SGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETD 293

Query: 483 IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
           + + NA+I MYAKCG +N AR  FD+M +++EVS+ ++I GY ++G   EAL++   ++ 
Sbjct: 294 VFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIEN 353

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ-DYNIEPCIEHYTCMVGLL 595
               P   T+  V+         ++   L + M     N++P +   + ++ L 
Sbjct: 354 ----PGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLF 403



 Score =  137 bits (345), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 23/342 (6%)

Query: 314 PWSLMIARYAQSD--RSKEALELFHCMRQSSVVPNNF-----------TFASVLQACAAQ 360
           P  +++ R A  +  R +  L L    +  S +  N             + S +Q C   
Sbjct: 3   PARIIVLRNAHGEGRRIRNPLALNEQFQTQSTLKTNLLKTHGGGLDIAAYGSAIQHCTNH 62

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
            L+  GKQ+H+      +  + F++  L+  YAK   I N+  +F + P +N  +WN+MI
Sbjct: 63  RLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMI 122

Query: 421 VGYVQLGDGEKAMNLFSSMIG---NDMQPTEVTFSSVLRACAGFAAL--DPGLQVHSLTI 475
           + Y        A++LF+S +    N++ P   T +S+L+  A  +++      Q+H   +
Sbjct: 123 IAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSAL 182

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
              + +D+ V NAL+  Y +CGRI  AR  FD+M +R+ V+WNAMI GYS  G   E   
Sbjct: 183 LRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKR 242

Query: 536 LFNKMQQTNCK---PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           L+ +M     K   PN +T   V+ AC  +  L  G  + + M  D  IE  +     ++
Sbjct: 243 LYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDD-GIETDVFLCNAII 301

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
            +  + G  + A +L  E+  +  V  +R+++   ++   +D
Sbjct: 302 AMYAKCGSLNYARELFDEMGEKDEV-SYRSIISGYMINGFVD 342


>Medtr7g093900.1 | PPR containing plant-like protein | HC |
           chr7:37365900-37360699 | 20130731
          Length = 854

 Score =  345 bits (885), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/552 (34%), Positives = 294/552 (53%), Gaps = 32/552 (5%)

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAAL 253
           G++  A  +F+ +   +   W  M+  Y        +   F  M  +    ++ +   AL
Sbjct: 42  GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFAL 101

Query: 254 KSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVI 313
           K+C   E    G+SV+    K  +D +L V   L+  YA+ G + +A+  F+E   KDV+
Sbjct: 102 KACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVV 161

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ MI  YA  D S+EA+E+F  M  S V PN  T  +V+ AC+    L +GK++H  V
Sbjct: 162 TWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 221

Query: 374 LKVGLDSNVFVSNALMDV-------------------------------YAKCGEIENSM 402
            +  +  ++ + NAL+D+                               YAKCG++E++ 
Sbjct: 222 EEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESAR 281

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
             F ++P +N V W+ MI GY Q    ++++ LF  M+   + P E T  SVL AC    
Sbjct: 282 RFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLT 341

Query: 463 ALDPGLQVHSLTIKTRYNN-DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
            L+ G  +H   +  +     + + NA++DMYAKCG I+ A   F  M +R  +SWN MI
Sbjct: 342 CLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMI 401

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY+ +G + +A+N+F++M+    +PN +TFV +L+ACS+ GL+ +G+  F +M + Y I
Sbjct: 402 AGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGI 461

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           +P   HY CMV LLGR G  +EA KLI  +P QP    W ALL AC +  N++L R  A 
Sbjct: 462 KPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAH 521

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFS 701
           ++L + P D G +VLL+N  A  ++W +V  VR  MK KGVKK PG S +E  G    F 
Sbjct: 522 NLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFL 581

Query: 702 VGDTSHPDNKLI 713
           V D SHP ++ I
Sbjct: 582 VADESHPQSEEI 593



 Score =  159 bits (402), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 32/366 (8%)

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFA 351
           A SGD+  A   F  + + +   W+ MI  Y  + +   A   F  M Q  V  ++ +F 
Sbjct: 39  AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFV 98

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
             L+AC     +  G+ ++  V K+G D  + V N L+  YA+ G ++N+  +F ES ++
Sbjct: 99  FALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDK 158

Query: 412 NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVH 471
           + VTW TMI GY      E+AM +F  M+ + ++P EVT  +V+ AC+    L+ G +VH
Sbjct: 159 DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVH 218

Query: 472 SLTIKTRYNNDIAVANALIDM-------------------------------YAKCGRIN 500
               +      +++ NAL+DM                               YAKCG + 
Sbjct: 219 EKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLE 278

Query: 501 DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
            AR  FD+  ++  V W+AMI GYS +    E+L LF++M +    P + T V VLSAC 
Sbjct: 279 SARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACG 338

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVW 620
               L+ G  + +       I   +     +V +  + G  D A ++   +P + +++ W
Sbjct: 339 QLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP-ERNLISW 397

Query: 621 RALLGA 626
             ++  
Sbjct: 398 NTMIAG 403



 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 34/413 (8%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +DS S+   L+   Q      G+ ++C + K G   +L   N L++FY +   L +A ++
Sbjct: 92  MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 151

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FDE    + +++ T+  G +     + A+ V   +     E N      ++     M   
Sbjct: 152 FDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL 211

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +   +H  V ++  +    +  +L+D Y  C  +  AR++FD +  KD+ SWT MV  Y
Sbjct: 212 EMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGY 271

Query: 222 A-------------------------------ENCFYEESLQLFCQMRVMGYRPNNYTIT 250
           A                               +N   +ESL+LF +M   G  P  +T+ 
Sbjct: 272 AKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLV 331

Query: 251 AALKSCLGLEAFGVGKSVHG-CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK 309
           + L +C  L    +G  +H    +       + +   ++++YAK G I  A   F  MP+
Sbjct: 332 SVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPE 391

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
           +++I W+ MIA YA + R+K+A+ +F  MR     PNN TF S+L AC+   L+  G++ 
Sbjct: 392 RNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREY 451

Query: 370 HSNV-LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN-EVTWNTMI 420
             N+  K G+         ++D+  + G +E +  L    P Q  E  W  ++
Sbjct: 452 FDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALL 504



 Score =  107 bits (266), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 2/213 (0%)

Query: 367 KQIHSNVLKVGLDSNVFVSNALMD--VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYV 424
           KQI + +   G+ ++ F  + ++     A  G++  +  +F    + N   WNTMI GY 
Sbjct: 11  KQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQ 70

Query: 425 QLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA 484
                  A + F  M    ++    +F   L+AC  F  +  G  V+ +  K  ++ ++ 
Sbjct: 71  NARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELL 130

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
           V N LI  YA+ G + +AR  FD+   ++ V+W  MI GY+ H  S EA+ +F  M  ++
Sbjct: 131 VRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSH 190

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
            +PN++T + V+SACS+ G L+ G+ + + + +
Sbjct: 191 VEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEE 223


>Medtr5g071190.1 | PPR containing plant-like protein | HC |
           chr5:30193271-30196237 | 20130731
          Length = 887

 Score =  344 bits (883), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 235/851 (27%), Positives = 393/851 (46%), Gaps = 124/851 (14%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +Y  LLQ  I       GK+LH  I      ++ F    L++ Y +   L  A K+F+EM
Sbjct: 85  TYMNLLQSCIDKDCIFIGKELHSRI-GLVENVNPFVETKLVSMYAKCGLLGMARKVFNEM 143

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
            + N  ++  +  GCSR+  +   + +   + ++G   + F+   +++            
Sbjct: 144 SVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGR 203

Query: 166 TIHACVYKRG-------------------------------HQADAFVGTSLIDAYSVCG 194
            IH+ V +RG                                + D+    ++I  +   G
Sbjct: 204 LIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNG 263

Query: 195 NVDAARQVFDGI---------------------------------------FCKDMVSWT 215
            +  A++ FD +                                          D+ +WT
Sbjct: 264 EIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWT 323

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
            M+  + +      +L L  +M + G   NN TI +A  +C  L++  +G  +H  A+K 
Sbjct: 324 SMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKM 383

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
               ++ VG  L+++Y K GD+  AQ  F+ M ++DV  W+ +I  Y Q+    +A ELF
Sbjct: 384 NLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELF 443

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
             M++S   PN  T+                                   N ++  Y + 
Sbjct: 444 MKMQESDSPPNIITW-----------------------------------NIMITGYMQS 468

Query: 396 GEIENSMILFME-----SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           G  + ++ LF         ++N  +WN++I G+VQ G  +KA+ +F +M    + P  VT
Sbjct: 469 GAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVT 528

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD 510
             S+L  CA   A     ++H   ++    ++++V+N LID YAK G +  ++  F+++ 
Sbjct: 529 ILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELS 588

Query: 511 KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQS 570
            ++ VSWN+M+  Y +HG S  AL+LF +M++   +PN+ TF  +L A  +AG++D+G+S
Sbjct: 589 WKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKS 648

Query: 571 LFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQ 630
           +F  +++DY +   +EHY+ MV LLGR GK  EA+  I  +P +P+  VW ALL AC + 
Sbjct: 649 VFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIH 708

Query: 631 KNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSW 690
           +N  +     + +LE +P ++ T  LLS  Y++  +++           K V K  G SW
Sbjct: 709 RNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEPEG-------EKAVNKPIGQSW 761

Query: 691 VENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLW 750
           +E   VVH F VGD S+P    +  +  WL +   +       N + ++ E+ E      
Sbjct: 762 IERNNVVHTFVVGDQSNP---YLDKLHSWLKRVAVNVKTHVSDNELYIEEEEKENTSS-- 816

Query: 751 VHSERLALAFGLLRIPSTCSI-RILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHF 809
           VHSE+LA AF L+   +   I RI+K LR+C DCH   K IS     EI + D N  HHF
Sbjct: 817 VHSEKLAFAFALIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGCEIYLSDSNCLHHF 876

Query: 810 QHGVCSCGDYW 820
           + G CSC DYW
Sbjct: 877 KGGHCSCRDYW 887



 Score =  183 bits (464), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 251/530 (47%), Gaps = 39/530 (7%)

Query: 90  VQFDCLD------DASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEV 143
            +FDC+       +++ +    P    +    L Q C        A+ ++  L ++G  V
Sbjct: 23  TKFDCISSKRVNANSNNVSTTKPSIRKLIDSQLNQLCING-SLSEAVTILDSLAEQGCRV 81

Query: 144 NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF 203
            P     +++  +  D   +   +H+ +       + FV T L+  Y+ CG +  AR+VF
Sbjct: 82  KPITYMNLLQSCIDKDCIFIGKELHSRI-GLVENVNPFVETKLVSMYAKCGLLGMARKVF 140

Query: 204 DGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFG 263
           + +  +++ +W+ M+G  + N  + E + LF  M   G  P+ + +   L++C       
Sbjct: 141 NEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLE 200

Query: 264 VGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYA 323
            G+ +H   ++       ++   ++ +YAK G++  A+  F+ M ++D + W+ MI+ + 
Sbjct: 201 TGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFC 260

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
           Q+    +A + F  M++  V P+  T+ ++L +C  Q    LG   H + L + L   + 
Sbjct: 261 QNGEIGQAQKYFDAMQKDGVEPSLVTW-NILISCYNQ----LG---HCD-LAIDLMRKME 311

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
                 DVY                      TW +MI G+ Q G    A++L   M    
Sbjct: 312 WFGIAPDVY----------------------TWTSMISGFTQKGRISHALDLLKEMFLAG 349

Query: 444 MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDAR 503
           ++   +T +S   ACA   +L  GL++HS+ +K    +++ V N+LIDMY KCG +  A+
Sbjct: 350 VEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQ 409

Query: 504 LTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAG 563
             FD M +R+  SWN++I GY   G   +A  LF KMQ+++  PN +T+  +++    +G
Sbjct: 410 HIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSG 469

Query: 564 LLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF 613
             D+   LFKS+ +D   +     +  ++    + G+ D+A+++   + F
Sbjct: 470 AEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQF 519



 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 8/273 (2%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D +S+ +++    Q        +L   + +  +P ++   NI++  Y+Q    D A  LF
Sbjct: 419 DVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLF 478

Query: 103 -----DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEV-NPFVCTTIIKLLV 156
                D     N  S+ +L  G  +S Q D AL  I R  +  H + N     +I+ +  
Sbjct: 479 KSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQ-IFRNMQFCHILPNSVTILSILPVCA 537

Query: 157 SMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG 216
           ++        IH    +R   ++  V   LID+Y+  GN+  ++ +F+ +  KD VSW  
Sbjct: 538 NLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNS 597

Query: 217 MVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK-A 275
           M+  Y  +   E +L LF QMR  G +PN  T  + L +         GKSV  C  K  
Sbjct: 598 MLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDY 657

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP 308
              Q +   + ++ L  +SG + +A  F + MP
Sbjct: 658 LVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMP 690


>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
           20130731
          Length = 1026

 Score =  344 bits (883), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/603 (32%), Positives = 317/603 (52%), Gaps = 38/603 (6%)

Query: 167 IHACVYKRGHQADAFVGTSLID--AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
           I A +   G   + F  + L+   A S    +D   ++   I   ++ SW   +  Y E+
Sbjct: 76  IQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVES 135

Query: 225 CFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
              E    L+ +M + G  +P+N+T    LK C G  +  +G  V G  LK  ++ D++V
Sbjct: 136 GDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFV 195

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
               + +    G++  A   F +   +D++ W+ MI    +   + EA++++  M    V
Sbjct: 196 HNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKV 255

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            PN  T   ++ +C+    L LGK+ H  + + GL+  + ++NALMD+Y KCGE+  + +
Sbjct: 256 RPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARV 315

Query: 404 LFMESPEQNEVTWNTMIVGYVQLG-------------------------------DGEKA 432
           LF    ++  V+W TM++GY + G                                G++A
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDM 492
           + LF  M    ++P +VT  + L AC+   ALD G+ +H    + + + D+A+  AL+DM
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDM 435

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTF 552
           YAKCG I  A   F+++ +R  ++W A+ICG ++HG + +AL+ F+KM      P+++TF
Sbjct: 436 YAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITF 495

Query: 553 VGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP 612
           +GVLSAC + GL+++G+  F  MS  +N+ P ++HY+CMV LLGR G  +EA +L+  +P
Sbjct: 496 LGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555

Query: 613 FQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVAS 672
                 V  AL  AC V  N+ +G   A  +LE+ P D G +VLL++MY+ AK W    S
Sbjct: 556 MAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARS 615

Query: 673 VRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKK----TRDAG 728
            RK M  KGV+K PG S VE  G+VH F V D SHP ++ I   L  L K+     R  G
Sbjct: 616 ARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLDVIVRKHG 675

Query: 729 YVP 731
           Y P
Sbjct: 676 YFP 678



 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 181/424 (42%), Gaps = 38/424 (8%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+H+Y  LL+          G  +   +LK G   D+F HN  +   +    L  A  +F
Sbjct: 157 DNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVF 216

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           ++  + + +++ ++  GC +      A+ +   +  E    N      +I     +   +
Sbjct: 217 NKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLN 276

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +    H  + + G +    +  +L+D Y  CG +  AR +FD +  K +VSWT MV  YA
Sbjct: 277 LGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYA 336

Query: 223 ENCFYE-------------------------------ESLQLFCQMRVMGYRPNNYTITA 251
              F +                               E+L LF +M++    P+  T+  
Sbjct: 337 RFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVN 396

Query: 252 ALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKD 311
            L +C  L A  VG  +H    +     D+ +GT L+++YAK G+I  A   FEE+P+++
Sbjct: 397 CLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRN 456

Query: 312 VIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHS 371
            + W+ +I   A    +++AL  F  M    +VP+  TF  VL AC    L+  G++  S
Sbjct: 457 CLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFS 516

Query: 372 NV-LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVT------WNTMIVGYV 424
            +  K  +   +   + ++D+  + G +E +  L    P   +        +   + G V
Sbjct: 517 EMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNV 576

Query: 425 QLGD 428
           Q+G+
Sbjct: 577 QIGE 580


>Medtr2g036960.1 | PPR containing plant-like protein | HC |
           chr2:16044626-16048085 | 20130731
          Length = 702

 Score =  343 bits (880), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 181/507 (35%), Positives = 291/507 (57%), Gaps = 3/507 (0%)

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           Y  +L L+ QM+ +   PNN+T      +C  LE   + +  H    K   D D +    
Sbjct: 98  YPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNS 157

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS-VVP 345
           ++ +Y + G+   A+  F+E+ +KD++ W+ +++ YA+   ++EA+E+F  +R+ S   P
Sbjct: 158 MVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEP 217

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           +  +  SVL AC     L LG+ +   V++ G+  N ++ +AL+ +Y+KCGE+ +S  +F
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
              P ++ +TWN  I  Y Q G  ++A++LF SM  N + P +VT ++VL ACA   ALD
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALD 337

Query: 466 PGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYS 525
            G Q+          +DI VA ALIDMYAKCG +  A+  F+ M ++ + SWNAMI   +
Sbjct: 338 LGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALA 397

Query: 526 MHGLSTEALNLFNKM--QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
            HG + EAL+LF +M  +  + +PN +TFV +LSAC +AGL+D+G  LF  MS  + + P
Sbjct: 398 SHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVP 457

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
            IEHY+CMV LL R G   EA  +I ++P +P  +   AL  AC  +KN+D+G    Q +
Sbjct: 458 KIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQML 517

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVG 703
           LE+ P + G +++ S +Y     WD+ A +R  M+  GV K PG SW+E    +  F  G
Sbjct: 518 LELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSG 577

Query: 704 DTSHPDNKLICAMLEWLNKKTRDAGYV 730
           D    D+  +  +++ L ++ +  GY+
Sbjct: 578 DGLTLDSIDVRNIIDLLYEELKKEGYL 604



 Score =  215 bits (548), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 224/422 (53%), Gaps = 8/422 (1%)

Query: 106 PLTNTISF-VTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC 164
           P  N  +F + L    +  H +   LH+  ++       N F    +     +++   + 
Sbjct: 77  PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136

Query: 165 WTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
              H  V+K G   D     S++  Y  CG    AR+VFD I  KD+VSW  ++  YA+ 
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196

Query: 225 CFYEESLQLFCQMR-VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
            F  E++++F ++R   G+ P+  ++ + L +C  L    +G+ V G  ++     + Y+
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
           G+ L+ +Y+K G++V ++  F+ MP +D I W+  I+ YAQ+  + EA+ LFH M+++ V
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            PN  T  +VL ACA+   L LGKQ+       GL  ++FV+ AL+D+YAKCG +E++  
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQR 376

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI--GNDMQPTEVTFSSVLRACAGF 461
           +F + P +N+ +WN MI      G  ++A++LF  M   G   +P ++TF S+L AC   
Sbjct: 377 VFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHA 436

Query: 462 AALDPGLQVHSLTIKTRYN--NDIAVANALIDMYAKCGRINDARLTFDKM-DKREEVSWN 518
             +D G ++  + + T +     I   + ++D+ ++ G + +A    +KM +K + V+  
Sbjct: 437 GLVDEGYRLFDM-MSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLG 495

Query: 519 AM 520
           A+
Sbjct: 496 AL 497



 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 186/352 (52%), Gaps = 10/352 (2%)

Query: 67  HCDILKRGAPLDLFAHNILLNFYVQFDCLDD--ASKLFDEMPLTNTISFVTLAQGCSRSH 124
           HC++ K G   D    N ++  Y  F C ++  A K+FDE+   + +S+ +L  G ++  
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMY--FRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLG 197

Query: 125 QFDHALHVILRLFKE-GHEVNPFVCTTIIKLLVSM-DLPHVCWTIHACVYKRGHQADAFV 182
               A+ V  RL +E G E +     +++     + DL    W +   V +RG + ++++
Sbjct: 198 FAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRW-VEGFVVERGMKVNSYI 256

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
           G++LI  YS CG + ++R++FDG+  +D ++W   +  YA+N   +E++ LF  M+  G 
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
            PN  T+TA L +C  + A  +GK +   A       D++V T L+++YAK G +  AQ 
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQR 376

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS--SVVPNNFTFASVLQACAAQ 360
            F +MP+K+   W+ MI+  A   ++KEAL LF  M     S  PN+ TF S+L AC   
Sbjct: 377 VFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHA 436

Query: 361 VLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
            L+  G ++   +  + GL   +   + ++D+ ++ G +  +  +  + PE+
Sbjct: 437 GLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488



 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 127/261 (48%), Gaps = 23/261 (8%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G+ +   +++RG  ++ +  + L++ Y +   L  + ++FD MP  + I++       ++
Sbjct: 238 GRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQ 297

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
           +   D A+ +   + + G + N    T ++    S+    +   +      RG Q D FV
Sbjct: 298 NGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFV 357

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG- 241
            T+LID Y+ CG++++A++VF+ +  K+  SW  M+   A +   +E+L LF +M   G 
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417

Query: 242 -YRPNNYTITAALKSCL-------GLEAFGVGKSVHGCALK----ACYDQDLYVGTELLE 289
             RPN+ T  + L +C+       G   F +  ++ G   K    +C          +++
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSC----------MVD 467

Query: 290 LYAKSGDIVDAQLFFEEMPKK 310
           L +++G + +A    E+MP+K
Sbjct: 468 LLSRAGHLYEAWDVIEKMPEK 488


>Medtr5g024100.1 | PPR containing plant-like protein | HC |
           chr5:9654442-9656866 | 20130731
          Length = 754

 Score =  342 bits (878), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 194/654 (29%), Positives = 351/654 (53%), Gaps = 12/654 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQF-DCLDDASKL 101
           + +++A LL+        + G Q+H  +++ G   + FA + L+  Y++  D L DA ++
Sbjct: 107 NENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRV 166

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVC--TTIIKLLVSMD 159
           F  +   + +++  +  G +++  F     ++ RLF E  E         T   LL    
Sbjct: 167 FYGLLERDVVAWNVMISGFAQNGDF----RMVQRLFSEMWEEQGLKPDRITFASLLKCCS 222

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
           + +    IH  VYK G + D  V ++++D Y+ C +V + R++FD +  KD   W+ M+ 
Sbjct: 223 VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMIS 282

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            Y  N   EE++  F  M     + + + +++ LK+C+ +E    G  VHG  +K  +  
Sbjct: 283 GYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQN 342

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS-KEALELFHCM 338
           D +V + LL LYA  G++ D +  F  +  KD++ W+ MI   A+  +     ++LF  +
Sbjct: 343 DCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQEL 402

Query: 339 RQSSVVP-NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           R+++ +     T  +VL++C     L  G+QIHS ++K  L  +  V NAL+ +Y++C +
Sbjct: 403 RRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQ 462

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           I+++   F++   +++ +W+++I    Q     KA+ L   M+   +  T  +    + A
Sbjct: 463 IDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISA 522

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSW 517
           C+    +  G Q+H   IK+ Y+ D+ + +++IDMYAKCG I ++   FD+  K  EV++
Sbjct: 523 CSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTF 582

Query: 518 NAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
           NA+I GY+ HG + +A+ + +K+++    PN +TF+ ++SACS+AG +++   LF  M  
Sbjct: 583 NAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLD 642

Query: 578 DYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGR 637
            Y I+P  EHY+C+V   GR G+ +EA +++ +     S   WR LL AC    N  +G 
Sbjct: 643 KYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHSNRKIGE 699

Query: 638 FCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
             A  ++E+ P D   ++LLSN+Y     W+   + RK M +  VKK+PG SW+
Sbjct: 700 KSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWL 753



 Score =  213 bits (543), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 242/472 (51%), Gaps = 17/472 (3%)

Query: 164 CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
           C  IHA +    + +   +  +L+  YS   N   A ++FD +  +++V+WT ++  + +
Sbjct: 26  CNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLK 85

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
                ++ ++F  MRV   RPN  T    L++C   E + VG  +HG  ++   +++ + 
Sbjct: 86  YGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFA 145

Query: 284 GTELLELYAKSG-DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM-RQS 341
           G+ L+ +Y K G D+ DA   F  + ++DV+ W++MI+ +AQ+   +    LF  M  + 
Sbjct: 146 GSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQ 205

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
            + P+  TFAS+L+ C+   +L    QIH  V K G + +V V +A++D+YAKC ++ + 
Sbjct: 206 GLKPDRITFASLLKCCS---VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSC 262

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             +F    +++   W++MI GY     GE+A+N F  M    ++  +   SS L+AC   
Sbjct: 263 RKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEI 322

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
             L+ G+QVH L IK  + ND  VA+ L+++YA  G + D    F ++D ++ V+WN+MI
Sbjct: 323 EDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMI 382

Query: 522 CGYSMHGLS-TEALNLFNKMQQTN-CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
              +  G      + LF ++++T   +    T V VL +C     L  G+ +   +    
Sbjct: 383 LAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLI---- 438

Query: 580 NIEPCIEHYT----CMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGAC 627
            ++  +  +T     +V +     + D+A K   +I  +     W +++G C
Sbjct: 439 -VKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDI-VRKDDSSWSSIIGTC 488



 Score =  213 bits (542), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 275/551 (49%), Gaps = 15/551 (2%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVI--LRLFKEG 140
           N LL+FY +      A KLFD+MP  N +++ TL     +      A  +   +R+  E 
Sbjct: 46  NTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDER 105

Query: 141 HEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCG-NVDAA 199
              N F    +++   + +L  V   IH  + + G + + F G+SL+  Y   G ++  A
Sbjct: 106 PNENTF--AVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDA 163

Query: 200 RQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLG 258
            +VF G+  +D+V+W  M+  +A+N  +    +LF +M    G +P+  T  + LK C  
Sbjct: 164 LRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSV 223

Query: 259 LEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLM 318
           L        +HG   K   + D+ V + +++LYAK  D+   +  F+ M KKD   WS M
Sbjct: 224 LNEV---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSM 280

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           I+ Y  ++R +EA+  F  M +  V  +    +S L+AC     L  G Q+H  ++K G 
Sbjct: 281 ISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGH 340

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDG-EKAMNLFS 437
            ++ FV++ L+++YA  GE+ +   LF    +++ V WN+MI+   + G G  + M LF 
Sbjct: 341 QNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQ 400

Query: 438 SMIGND-MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
            +     +Q    T  +VL++C   + L  G Q+HSL +K+       V NAL+ MY++C
Sbjct: 401 ELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSEC 460

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
            +I+DA   F  + ++++ SW+++I     + + ++AL L  +M          +    +
Sbjct: 461 KQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCI 520

Query: 557 SACSNAGLLDKGQSLFK-SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
           SACS    + +G+ L   ++   Y+ +  I   + ++ +  + G  +E+ K+  E   +P
Sbjct: 521 SACSQLLTISEGKQLHVFAIKSGYSCDVYIG--SSIIDMYAKCGNIEESEKVFDE-QLKP 577

Query: 616 SVMVWRALLGA 626
           + + + A++  
Sbjct: 578 NEVTFNAIISG 588



 Score =  150 bits (378), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 192/391 (49%), Gaps = 23/391 (5%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD H  ++ L+  ++    N G Q+H  ++K G   D F  ++LLN Y  F  L D  KL
Sbjct: 307 LDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKL 366

Query: 102 FDEMPLTNTISFVTL-------AQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL 154
           F  +   + +++ ++        QGC R  Q    L     L  +G         T++ +
Sbjct: 367 FSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQG--------ATLVAV 418

Query: 155 LVS----MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKD 210
           L S     DLP     IH+ + K        VG +L+  YS C  +D A + F  I  KD
Sbjct: 419 LKSCEKDSDLP-AGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKD 477

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHG 270
             SW+ ++G   +N    ++L+L  +M   G    +Y++   + +C  L     GK +H 
Sbjct: 478 DSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHV 537

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
            A+K+ Y  D+Y+G+ ++++YAK G+I +++  F+E  K + + ++ +I+ YA   ++++
Sbjct: 538 FAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQ 597

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALM 389
           A+E+   + ++ V PN+ TF +++ AC+    +     + + +L K  +       + L+
Sbjct: 598 AIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLV 657

Query: 390 DVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
           D Y + G +E +  +  +  + +E  W T++
Sbjct: 658 DAYGRAGRLEEAYQIVQK--DGSESAWRTLL 686



 Score =  114 bits (284), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 108/202 (53%), Gaps = 2/202 (0%)

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
           ++L    QIH+ ++     S   ++N L+  Y+K      +  LF + P +N VTW T+I
Sbjct: 21  IILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLI 80

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
             +++ G   KA  +F+ M  +D +P E TF+ +LRAC        GLQ+H L ++    
Sbjct: 81  SSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLE 140

Query: 481 NDIAVANALIDMYAKCG-RINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
            +    ++L+ MY K G  + DA   F  + +R+ V+WN MI G++ +G       LF++
Sbjct: 141 REKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSE 200

Query: 540 M-QQTNCKPNKLTFVGVLSACS 560
           M ++   KP+++TF  +L  CS
Sbjct: 201 MWEEQGLKPDRITFASLLKCCS 222


>Medtr2g049310.1 | PPR containing plant-like protein | HC |
           chr2:21732028-21729769 | 20130731
          Length = 717

 Score =  341 bits (875), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 208/666 (31%), Positives = 351/666 (52%), Gaps = 10/666 (1%)

Query: 60  PNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQG 119
           P   +Q+H      G   +    + L++ Y  F  L  + K+F      ++I +    + 
Sbjct: 34  PQYLQQIHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRN 93

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK-LLVSMDLPHVCWTIHACVYKRGHQA 178
                +++  L +   + ++    +   C +++K L        +    H  V K G  A
Sbjct: 94  LFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDA 153

Query: 179 DAFVGTSLIDAYSVC-GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
              VG +LI+ Y    GN    R+         +  W  ++    E+    ES +LFC+M
Sbjct: 154 FDLVGNTLIELYGFLNGNGLVERKS-----VTKLNFWNNLIYEAYESGKIVESFELFCRM 208

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
           R    +PN+ T+   L++ +   +  +GK +H   + +   ++L V T LL +YAK   +
Sbjct: 209 RNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSL 268

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
            DA+L FE+MP+KDV+ W++MI+ Y+ S   KE+LEL +CM +S + P+ FT    + + 
Sbjct: 269 KDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSI 328

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWN 417
                +  GKQ+H+ V++ G D  V V N+L+D+Y+ C ++ ++  +F    ++  V+W+
Sbjct: 329 TKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWS 388

Query: 418 TMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
            MI GY    +  +A++LF  M  +  +   V   ++L A A   AL     +H  ++KT
Sbjct: 389 AMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKT 448

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTF--DKMDKREEVSWNAMICGYSMHGLSTEALN 535
             ++  ++  +L++ YAKCG I  AR  F  +K   ++ V+WN+MI  YS HG   +   
Sbjct: 449 NLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFE 508

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           L+N+++ +  KP+ +TF+G+L+AC N+GL+DKG+ +FK M   Y  +P  EH  CMV LL
Sbjct: 509 LYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLL 568

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQK-NIDLGRFCAQHVLEMKPHDDGTH 654
           GR GK DEA K+I          V+  LL AC +     D     A+ +++M+P +   +
Sbjct: 569 GRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKMEPENPANY 628

Query: 655 VLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLIC 714
           VLLSN++A A +WD  A +R  ++ +G+KK PG SWV   G  H F V D SHP ++ I 
Sbjct: 629 VLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIY 688

Query: 715 AMLEWL 720
           ++L+ L
Sbjct: 689 SVLKVL 694



 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 13/370 (3%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
           QP  +S +   LL+  +++     GK LH  ++      +L  +  LL+ Y + D L DA
Sbjct: 214 QP--NSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDA 271

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
             +F++MP  + + +  +    S S     +L ++  + + G  + P + T I  +    
Sbjct: 272 RLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSG--IRPDMFTAIPAISSIT 329

Query: 159 DLPHVCW--TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG 216
            L  + W   +HA V + G      V  SL+D YS C ++++AR++F  I  + +VSW+ 
Sbjct: 330 KLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSA 389

Query: 217 MVGCYA--ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
           M+  YA  +NC   E+L LF +M++ G + +   +   L +   + A      +HG +LK
Sbjct: 390 MIKGYAMHDNCL--EALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLK 447

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK--KDVIPWSLMIARYAQSDRSKEAL 332
              D    + T LL  YAK G I  A+  F E     KD++ W+ MI  Y+      +  
Sbjct: 448 TNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCF 507

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDV 391
           EL++ ++ S V P++ TF  +L AC    L+  GK+I   ++ + G   +   +  ++D+
Sbjct: 508 ELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDL 567

Query: 392 YAKCGEIENS 401
             + G+I+ +
Sbjct: 568 LGRAGKIDEA 577


>Medtr4g007160.1 | PPR containing plant-like protein | HC |
           chr4:976511-978646 | 20130731
          Length = 595

 Score =  341 bits (875), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 199/555 (35%), Positives = 298/555 (53%), Gaps = 10/555 (1%)

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           +A  F G  + D    C  +      F    C  ++S       Y    F   +++++  
Sbjct: 46  KAANFFGKHVTDIRYPCNFLKQFDWSFSSFPCNLIIS------GYGAGNFPWAAIRIYRW 99

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           +   G+ P+ YT+ A LKSC         K +H  A+K     D++V    + +Y+  GD
Sbjct: 100 VVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGD 159

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
            V A   F+ MP +DV+ W+ +I+ Y ++    +A+ LF  M    V PN  TF S+L A
Sbjct: 160 TVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATFVSILGA 216

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
           C     L LGK IH  V K      + VSN LMD+Y KC  + ++  LF E PE++ V+W
Sbjct: 217 CGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSW 276

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
            +MI G VQ    +++++LF  M+G+  +P  V  +SVL ACA    LD G  VH     
Sbjct: 277 TSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDH 336

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
           +R   D+ +  +LIDMYAKCG I  A+  F+ +  +   +WNA I G +++G   EAL  
Sbjct: 337 SRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQ 396

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM-SQDYNIEPCIEHYTCMVGLL 595
           F  + ++  +PN++TF+ V SAC ++GL+D+G+S FK M S  YN+ P +EHY CMV LL
Sbjct: 397 FGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLL 456

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHV 655
            R    +EA++LI ++P  P V +  ALL A     N++L     + V   +  + G +V
Sbjct: 457 CRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYV 516

Query: 656 LLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICA 715
           LLSN YA  K+W  V SVR+ MK KG+ K PG S +   G  H F VGD +HP ++ I  
Sbjct: 517 LLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIHV 576

Query: 716 MLEWLNKKTRDAGYV 730
           +L  L  +T   G++
Sbjct: 577 LLNILANQTYLEGHI 591



 Score =  145 bits (367), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 181/376 (48%), Gaps = 9/376 (2%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D ++  A+L+   +       KQ+H   +K     D+F  N  ++ Y        ASK+F
Sbjct: 108 DVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVF 167

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCT--TIIKLLVSMDL 160
           D MP+ + +S+  L  G  ++  F+ A+ + LR+     +V P   T  +I+     +  
Sbjct: 168 DFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM-----DVAPNAATFVSILGACGKLGC 222

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            ++   IH  V K  H  +  V  +L+D Y  C +V  A+++FD I  KD+VSWT M+  
Sbjct: 223 LNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISG 282

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
             +    +ESL LF +M   G+ P+   +T+ L +C  L     G+ VH     +    D
Sbjct: 283 LVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWD 342

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           +++GT L+++YAK G I  AQ  F  +P K++  W+  I   A +   +EAL+ F  + +
Sbjct: 343 VHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVE 402

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSN--ALMDVYAKCGEI 398
           S   PN  TF +V  AC    L+  G+     +     + + ++ +   ++D+  +   +
Sbjct: 403 SGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELV 462

Query: 399 ENSMILFMESPEQNEV 414
           E +M L  + P   +V
Sbjct: 463 EEAMELINKMPMPPDV 478


>Medtr1g073160.1 | PPR containing plant-like protein | HC |
           chr1:32444344-32441927 | 20130731
          Length = 627

 Score =  341 bits (874), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 194/577 (33%), Positives = 323/577 (55%), Gaps = 18/577 (3%)

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
           L S+ L   C   H+ +       +AF+ T LI AY+  G+   ++ VFD +  K++  W
Sbjct: 39  LHSLKLTQQC---HSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLW 95

Query: 215 TGMVGCYAENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
             ++  Y +N  ++ ++ LF QM R +   P++YT+    K    ++   +GK +HG +L
Sbjct: 96  NSLINGYVKNHQFDNAIVLFRQMGRCL--LPDDYTLATISKVSGEIQDLVLGKLIHGKSL 153

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL- 332
           +  +  D+ VG  ++ +Y +  +  DA   F+EMP+++V  ++++I+  A       +L 
Sbjct: 154 RIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLY 213

Query: 333 ----ELFHCMRQSSVVPNNFTFASVLQACA-AQVLLILGKQIHSNVLKVGLD----SNVF 383
                 F  M+      + FT AS+L  C  +      G+++H  ++K GLD    S+V 
Sbjct: 214 ADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVH 273

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
           + ++L+D+Y++  ++  S  +F +   +N   W  MI GYVQ G  E A+ LF  M   D
Sbjct: 274 MGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKD 333

Query: 444 -MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
            ++P  V+  SVL AC     L  G QVH+ +IK  +N+ I++ NALIDMYAKCG ++ A
Sbjct: 334 RIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYA 393

Query: 503 RLTFDKMD-KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           R  FD     ++ ++W+++I  Y +HG   EAL  + +M Q   KP+ +T VGVLSAC  
Sbjct: 394 RRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCR 453

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
           +GL+D+G S++ S++ +Y ++P +E   C+V LLGR G+ D+A+  I E+P  P   VW 
Sbjct: 454 SGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWG 513

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           +LL A V+  N        + +LE++P +   ++ LSN YA ++RWD +  VR  MK +G
Sbjct: 514 SLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERG 573

Query: 682 VKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLE 718
           ++K PG+SW+      H+F+V D  HP +  I  ML+
Sbjct: 574 LRKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLD 610



 Score =  181 bits (459), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 246/503 (48%), Gaps = 19/503 (3%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           L  H+   LLQ +I        +Q H  IL      + F    L++ Y  F     +  +
Sbjct: 24  LSPHNLLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLV 83

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD +   N   + +L  G  ++HQFD+A+ V+ R        + +   TI K+   +   
Sbjct: 84  FDSVHTKNVYLWNSLINGYVKNHQFDNAI-VLFRQMGRCLLPDDYTLATISKVSGEIQDL 142

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV-GC 220
            +   IH    + G  +D  VG S++  Y  C     A +VFD +  +++ S+  ++ GC
Sbjct: 143 VLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGC 202

Query: 221 YA----ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEA-FGVGKSVH------ 269
            A    +   Y +    F +M+  GY  + +T+ + L  C   +  F  G+ +H      
Sbjct: 203 AALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKN 262

Query: 270 GCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK 329
           G  LK C   D+++G+ L+++Y++S  +V ++  F++M  +++  W+ MI  Y Q+   +
Sbjct: 263 GLDLKMC--SDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPE 320

Query: 330 EALELFHCM-RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL 388
            AL LF  M R+  + PN  +  SVL AC   V L+ GKQ+H+  +K+  +  + + NAL
Sbjct: 321 GALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNAL 380

Query: 389 MDVYAKCGEIENSMILFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPT 447
           +D+YAKCG ++ +  +F   S  ++ +TW+++I  Y   G G++A+  +  M+   ++P 
Sbjct: 381 IDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPD 440

Query: 448 EVTFSSVLRACAGFAALDPGLQVH-SLTIKTRYNNDIAVANALIDMYAKCGRINDARLTF 506
            +T   VL AC     +D G+ ++ SLT +      + +   ++D+  + G+++ A    
Sbjct: 441 MITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFI 500

Query: 507 DKMDKREEVS-WNAMICGYSMHG 528
            +M      S W +++    +HG
Sbjct: 501 REMPIIPGPSVWGSLLTASVIHG 523


>Medtr5g094220.1 | PPR containing plant-like protein | HC |
           chr5:41149037-41146758 | 20130731
          Length = 759

 Score =  340 bits (873), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/658 (30%), Positives = 355/658 (53%), Gaps = 19/658 (2%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGA-PLDLFAHNILLNFYVQFDCLDDAS 99
           P+ + SYA  +          +G  LH    K G  P +    +  ++ Y + D ++DA 
Sbjct: 114 PMVASSYAHFMM-------IRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAV 166

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN-PFVCTTIIKLLVSM 158
           K+FDE+P+ + +++  L  G  ++ + +  L  I  +++ G +   P   T     L   
Sbjct: 167 KVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACG 226

Query: 159 DLPHVCWT--IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTG 216
           +L  +     +H  V K G      + +S++  Y  CG    A Q F  +  KD++SWT 
Sbjct: 227 NLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTS 286

Query: 217 MVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLG--LEAFGVGKSVHGCALK 274
           M+  YA      + ++ F +M      P+   I   L S  G  ++ +G GK+ HG  ++
Sbjct: 287 MIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCIL-SGFGNSVDVYG-GKAFHGLIIR 344

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
             Y  D  V   LL +Y K G +  A+  F+   +  +  W+ MI  Y +  ++ + ++L
Sbjct: 345 RHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQL 403

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAK 394
           F  M+   +   +    S + +C     + LG+ IH NV+K  +D  + V+N+L+++Y K
Sbjct: 404 FREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGK 463

Query: 395 CGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSV 454
           C ++  S  +F  S E++ + WN +I  ++ +   E+A++LF  MI  D  P   T   V
Sbjct: 464 CDKMNVSWRIFNRS-ERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVV 522

Query: 455 LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           L AC+  A L+ G ++H    +  +  ++ +  AL+DMYAKCG++  +R  FD M +++ 
Sbjct: 523 LSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDV 582

Query: 515 VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
           + WNAMI GY M+G +  A+ +FN M+++N KPN++TF+ +LSAC++AGL+++G+++F  
Sbjct: 583 ICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAK 642

Query: 575 MSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID 634
           M Q Y+++P ++HYTCMV LLGR    +EA +L+  +P  P   VW ALL AC     I+
Sbjct: 643 M-QSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIE 701

Query: 635 LGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMK-RKGVKKEPGLSWV 691
           +G    ++ ++ +P +DG +++++NMY+   RWD   +VR+ MK R  + K+ G S V
Sbjct: 702 MGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 759



 Score =  161 bits (407), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 205/463 (44%), Gaps = 8/463 (1%)

Query: 168 HACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFY 227
           HA     G+  + F+   LI  Y    +  ++  +F  +  KD   W   +        Y
Sbjct: 32  HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 91

Query: 228 EESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK-ACYDQDLYVGTE 286
            + L  +  MR     PN++T      S         G ++H  A K   + ++  VG+ 
Sbjct: 92  PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 151

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ---SSV 343
            + LY++  ++ DA   F+E+P +DV+ W+ ++  Y Q+  S+  LE    M +    S 
Sbjct: 152 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 211

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            PN  T      AC     L+ G+ +H  V+K G+   + + ++++ +Y KCG    +  
Sbjct: 212 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQ 271

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
            F E   ++ ++W +MI  Y + G     +  F  M+ N + P  +    +L        
Sbjct: 272 SFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVD 331

Query: 464 LDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICG 523
           +  G   H L I+  Y  D  V N+L+ MY K G ++ A   F +     E  WN MI G
Sbjct: 332 VYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQGSIEY-WNFMIVG 390

Query: 524 YSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           Y   G + + + LF +MQ    +   +  V  +++C   G ++ G+S+  ++ + + ++ 
Sbjct: 391 YGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF-VDE 449

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            I     ++ + G+  K + + ++      +  V++W AL+ A
Sbjct: 450 TISVTNSLIEMYGKCDKMNVSWRIFNRS--ERDVILWNALISA 490



 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 180/412 (43%), Gaps = 50/412 (12%)

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS 328
           H   +      + ++  +L+ LY        +   F  +P KD   W+  +         
Sbjct: 32  HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 91

Query: 329 KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG-LDSNVFVSNA 387
            + L  +  MR  +V+PN+FTF  V  + A  +++  G  +H+   KVG    N  V ++
Sbjct: 92  PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 151

Query: 388 LMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM--IGNDMQ 445
            + +Y++C E+ +++ +F E P ++ V W  +++GYVQ G+ E  +   S M  +G+D Q
Sbjct: 152 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 211

Query: 446 -PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARL 504
            P   T      AC     L  G  +H L +K      + + ++++ MY KCG   +A  
Sbjct: 212 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQ 271

Query: 505 TFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA-- 562
           +F ++  ++ +SW +MI  Y+  G+ ++ +  F +M +    P+ +    +LS   N+  
Sbjct: 272 SFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVD 331

Query: 563 ---------------------------------GLLDKGQSLFKSMSQDYNIEPCIEHYT 589
                                            G+L   + LF+        +  IE++ 
Sbjct: 332 VYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRS------QGSIEYWN 385

Query: 590 CMVGLLGRLGKFDEAVKLIGEIPF----QPSVMVWRALLGACVVQKNIDLGR 637
            M+   GR+GK  + ++L  E+ +      SV +  A + +C     I+LGR
Sbjct: 386 FMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSA-IASCGQLGEINLGR 436



 Score = 50.8 bits (120), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 1/172 (0%)

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
           L  H++T+ T  + +  +A  LI +Y        +   F  +  ++   WN+ +      
Sbjct: 29  LPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSR 88

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
            L  + L+ ++ M+  N  PN  TF  V S+ ++  ++  G +L     +          
Sbjct: 89  SLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAV 148

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFC 639
            +  V L  R  + ++AVK+  EIP +  V+ W AL+   V     ++G  C
Sbjct: 149 GSSFVSLYSRCDEMNDAVKVFDEIPVR-DVVAWTALVIGYVQNGESEMGLEC 199


>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
           LC | chr8:27704772-27714873 | 20130731
          Length = 1504

 Score =  337 bits (864), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 372/761 (48%), Gaps = 81/761 (10%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDL--FAHNILLNFYVQFDCLDDA 98
           P+    Y  LLQ  +  R  + G Q+H  ++K+G+      F  + L+  Y + +    A
Sbjct: 100 PIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVA 159

Query: 99  SKLF-DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
              F + +   N  S+  +    +R+  +  AL   + + ++G   + FV    +K    
Sbjct: 160 VHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGG 219

Query: 158 MDLPHVCWTIHACVYKRGHQADA--FVGTSLIDAYSVCGNVDAARQVFDGI--FCKDMVS 213
           +        IH  V K G++ D   +V TSL+D Y  CG ++ A +VFD +    ++ V 
Sbjct: 220 LRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVV 279

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVM-GYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           W  M+  Y +N    E++ LF +MR   G  P+  +++    +C  LEA   GK  H   
Sbjct: 280 WNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALV 339

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK-KDVIPWSLMIARYAQSDRSKEA 331
           +   ++ +  +G+ ++  Y+K G I + +L F  M   KD + W+LMI+ Y Q    ++A
Sbjct: 340 ILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKA 399

Query: 332 LELFHCMRQSSVVPNN-FTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD 390
           LE+ H MR+   +  +  T +S+L   A    + LGK++H   ++    S++ V + ++D
Sbjct: 400 LEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLD 459

Query: 391 VYAKCGEIE------------------NSMI--------------LF----MESPEQNEV 414
           +YAKCG ++                  N+M+              LF    MES   N V
Sbjct: 460 MYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVV 519

Query: 415 TWN-----------------------------------TMIVGYVQLGDGEKAMNLFSSM 439
           +WN                                   TMI G  Q G G +A  +F  M
Sbjct: 520 SWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQM 579

Query: 440 IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRI 499
            G  M+P  ++ +S L AC   A L+ G  +H   ++   +  + +  ++IDMYAKCG +
Sbjct: 580 QGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNL 639

Query: 500 NDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSAC 559
           +DA+  F     +E   +NAMI  Y+ HG S EAL LF ++ +    P+ +TF  VLSAC
Sbjct: 640 DDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSAC 699

Query: 560 SNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMV 619
           S+  LL +G  LFK M  +  ++P  +HY C+V LL   G+ DEA+++I  +P  P   +
Sbjct: 700 SHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHI 759

Query: 620 WRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKR 679
             +LL AC      +L  + A+ +L+++P++ G +V LSN+YA   +WD V+++R  MK 
Sbjct: 760 LGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKE 819

Query: 680 KGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWL 720
           KG+KK PG SW+E    ++ F   D SHP+ + I  +L+ L
Sbjct: 820 KGLKKIPGCSWIEVGQELNVFIASDKSHPEKEEIYKILDLL 860


>Medtr8g066250.1 | PPR containing plant-like protein | HC |
           chr8:27517637-27514893 | 20130731
          Length = 728

 Score =  336 bits (861), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 312/572 (54%), Gaps = 11/572 (1%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           I A +   G + + FV  + I   S    +  AR++FD I   +  +W  M   Y +N  
Sbjct: 31  IQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGH 90

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           + +++ LF ++  +   PN +T    +KSC  LE    G+ VH CA K  +  + +V T 
Sbjct: 91  HRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATS 150

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+++Y+K G + DA   F EM +++V+ W+ +I  Y           LF    +  VV  
Sbjct: 151 LIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMW 210

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
           +   +  +++        L  ++         + +    NA+++ YA  GE+E    +F 
Sbjct: 211 SVLISGYIESKNMAAARELFDKMP--------NRDTMSWNAMLNGYAVNGEVEMFEKVFD 262

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQPTEVTFSSVLRACAGFAALD 465
           E PE+N  +WN +I GYV+ G   + +  F  M +   + P + T  +VL AC+   ALD
Sbjct: 263 EMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALD 322

Query: 466 PGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYS 525
            G  VH       Y  ++ V N LIDMYAKCG I +A + F+ +D+++ +SWN +I G +
Sbjct: 323 MGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLA 382

Query: 526 MHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCI 585
           +HG + +AL +F++M+    +P+ +TFVG+LSAC++ GL+  G   FKSM   Y+I P I
Sbjct: 383 IHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQI 442

Query: 586 EHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLE 645
           EHY CMV LLGR G  D+A+  I ++P +P  ++W ALLGAC + KN+++     Q ++E
Sbjct: 443 EHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIE 502

Query: 646 MKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE-NQGVVHYFSVGD 704
           ++P++    V++SN+Y    R ++VA ++  M+  G +K PG S +E N  VV ++S+ D
Sbjct: 503 LEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSL-D 561

Query: 705 TSHPDNKLICAMLEWLNKKTRDAGYVPDCNAV 736
             H + + I  +L+ L    R  GYVP+ + V
Sbjct: 562 ERHSETESIYRVLKGLTMLLRSHGYVPNLSDV 593



 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 13/279 (4%)

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           F ++L++C     L    QI + ++  GL+ N FV+   +   ++   I ++  LF + P
Sbjct: 15  FITLLRSCKNYERL---HQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
           + N  TWN M  GY+Q G     + LF  +      P   TF  ++++C     +  G +
Sbjct: 72  QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEE 131

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGL 529
           VH    K  + ++  VA +LIDMY+K G + DA   F +M +R  V W A+I GY + G 
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191

Query: 530 STEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYT 589
                 LF+   + +     +   G + + + A      + LF  M     +      + 
Sbjct: 192 VVSGRRLFDLAPERDVVMWSVLISGYIESKNMAA----ARELFDKMPNRDTMS-----WN 242

Query: 590 CMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
            M+      G+ +   K+  E+P + +V  W  L+G  V
Sbjct: 243 AMLNGYAVNGEVEMFEKVFDEMP-ERNVFSWNGLIGGYV 280



 Score = 90.9 bits (224), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 14/320 (4%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P  D   ++ L+   I++++  A ++L   +  R    D  + N +LN Y     ++   
Sbjct: 203 PERDVVMWSVLISGYIESKNMAAARELFDKMPNR----DTMSWNAMLNGYAVNGEVEMFE 258

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEV-NPFVCTTIIKLLVSM 158
           K+FDEMP  N  S+  L  G  ++  F   L    R+  EGH + N F    ++     +
Sbjct: 259 KVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRL 318

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
               +   +H      G++ + FVG  LID Y+ CG ++ A  VF+ +  KD++SW  ++
Sbjct: 319 GALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTII 378

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC--LGLEAFGVGKSVHGCALKAC 276
              A +    ++L +F +M+  G  P+  T    L +C  +GL   G           + 
Sbjct: 379 NGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSI 438

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIAR---YAQSDRSKEAL 332
             Q  + G  +++L  ++G +  A  F  +MP + D + W+ ++     Y   + ++ AL
Sbjct: 439 VPQIEHYGC-MVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELAL 497

Query: 333 ELFHCMRQSSVVPNNFTFAS 352
           +    +  ++  P NF   S
Sbjct: 498 QRLIELEPNN--PANFVMVS 515


>Medtr3g098230.1 | PPR containing plant-like protein | HC |
           chr3:44828973-44831769 | 20130731
          Length = 873

 Score =  334 bits (856), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 215/725 (29%), Positives = 361/725 (49%), Gaps = 43/725 (5%)

Query: 44  SHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLD-DASKLF 102
           S + A +L    ++ + N GK +H  ++K G  +D FA N L++ Y +   +  DA  +F
Sbjct: 146 SVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVF 205

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD--L 160
           D +   + +S+  +  G + +     A  +   + K   + N      I+ +  S D  +
Sbjct: 206 DSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENI 265

Query: 161 PHVCW-TIHACVYKRGH-QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
            H C   IH+ V +     AD  V  +L+  Y   G    A  +F  +  +D+VSW  ++
Sbjct: 266 AHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTII 325

Query: 219 GCYAENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
             YA N  + +SL +F  +  +     ++ T+ + L +C  L+    GK VH   L+  +
Sbjct: 326 AGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPF 385

Query: 278 -DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH 336
             +D   G  L+  YAK G I +A   F  + +KD+I W+ ++  + +       L L H
Sbjct: 386 LFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLH 445

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG---LDSNVFVSNALMDVYA 393
            M +  + P++ T  +++  CA+ + +   K+IH   ++ G     +   V NA++D Y+
Sbjct: 446 VMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYS 505

Query: 394 KCGEIENSMILFME-SPEQNEVTWNTMIVGYVQLGD------------------------ 428
           KCG IE +  +F   S ++N VT N++I GYV LG                         
Sbjct: 506 KCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVR 565

Query: 429 -------GEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
                   E+A+ LF  +    M+P  VT  S++  C   A++    Q H   I++ +  
Sbjct: 566 VYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE- 624

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           D+ +   L+D YAKCG I  A   F     ++ V + AMI GY+MHG+S +AL  F+ M 
Sbjct: 625 DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHML 684

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKF 601
               KP+ + F  +LSACS+AG + +G  +F S+ + + ++P IE + C+V LL R G  
Sbjct: 685 NMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHV 744

Query: 602 DEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMY 661
            EA   + +IP + +  +W  LLGAC     ++LGR  A  + +++ +D G +++LSN+Y
Sbjct: 745 SEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLY 804

Query: 662 AVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLN 721
           A   RWD V  VRK M+ K +KK  G SW+E +   + F VGD SHP   LI + L  L+
Sbjct: 805 AADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLD 864

Query: 722 KKTRD 726
           ++ ++
Sbjct: 865 QQVKE 869



 Score =  207 bits (528), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 255/562 (45%), Gaps = 44/562 (7%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D    AA+L+        N GK LH  ++K+G          LLN Y +   LDD  KLF
Sbjct: 42  DHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLF 101

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCT--TIIKLLVSMDL 160
           D+    + + +  +  G SRS + D  +  + R      EV P   T  T++ +      
Sbjct: 102 DQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGN 161

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDA-ARQVFDGIFCKDMVSWTGMVG 219
            +   ++H  V K G + D F G +L+  Y+ CG V   A  VFD I  KD+VSW  M+ 
Sbjct: 162 LNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIA 221

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLE---AFGVGKSVHGCALK-A 275
             AEN   +E+  LF  M     +PN  T+   L  C   +   A   G+ +H   L+  
Sbjct: 222 GLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWP 281

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
               D+ V   LL  Y K G   +A+  F  M  +D++ W+ +IA YA +    ++L +F
Sbjct: 282 ELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVF 341

Query: 336 -HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYA 393
            + +    ++ ++ T  S+L ACA    L  GKQ+H+ +L+   L  +    NAL+  YA
Sbjct: 342 GNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYA 401

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           KCG IE +   F     ++ ++WN+++  + +     + ++L   M+  D++P  VT  +
Sbjct: 402 KCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILT 461

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRY---NNDIAVANALIDMYAKCGRIN---------- 500
           ++  CA    +    ++H  +I++          V NA++D Y+KCG I           
Sbjct: 462 IIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLS 521

Query: 501 ----------------------DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
                                 DA + F  M + +  +WN M+  Y+ +    +AL LF 
Sbjct: 522 EKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFL 581

Query: 539 KMQQTNCKPNKLTFVGVLSACS 560
           K+Q    KP+ +T + ++  C+
Sbjct: 582 KLQTQGMKPDVVTIMSLIPVCT 603



 Score =  206 bits (523), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 231/434 (53%), Gaps = 13/434 (2%)

Query: 137 FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNV 196
           FK  HEV   +  +   LL S    ++   +H+ V K+GH +      +L++ Y+ CG +
Sbjct: 39  FKPDHEVLAAILKSCSALLAS----NLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGML 94

Query: 197 DAARQVFDGIFCKDMVSWTGMVGCYAENCFYE-ESLQLFCQMRVMG-YRPNNYTITAALK 254
           D   ++FD     D V W  ++  Y+ +   + + +++F  M   G   P++ TI   L 
Sbjct: 95  DDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLP 154

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV-DAQLFFEEMPKKDVI 313
            C        GKSVHG  +K+ ++ D + G  L+ +YAK G +  DA   F+ +  KDV+
Sbjct: 155 VCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVV 214

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA---QVLLILGKQIH 370
            W+ MIA  A++   KEA  LF  M + SV PN  T A++L  CA+    +    G+QIH
Sbjct: 215 SWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIH 274

Query: 371 SNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDG 429
           S VL+   L ++V V NAL+  Y K G  + +  LF     ++ V+WNT+I GY   G+ 
Sbjct: 275 SYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEW 334

Query: 430 EKAMNLFSSMIGNDMQPTE-VTFSSVLRACAGFAALDPGLQVHSLTIKTRY-NNDIAVAN 487
            K++++F +++  +M   + VT  S+L ACA    L  G QVH+  ++  +   D +  N
Sbjct: 335 LKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGN 394

Query: 488 ALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           AL+  YAKCG I +A  TF  + +++ +SWN+++  +      +  L+L + M + + +P
Sbjct: 395 ALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRP 454

Query: 548 NKLTFVGVLSACSN 561
           + +T + ++  C++
Sbjct: 455 DSVTILTIIHFCAS 468



 Score =  183 bits (465), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 218/428 (50%), Gaps = 11/428 (2%)

Query: 209 KDMVSWTGMVGCYAENCFYEESLQLF--CQMRVMGYRPNNYTITAALKSCLGLEAFGVGK 266
           ++ ++W   +     +  + E+L  F  C      ++P++  + A LKSC  L A  +GK
Sbjct: 4   RNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGK 63

Query: 267 SVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSD 326
            +H   +K  +         LL +YAK G + D    F++  + D + W+++++ Y++S 
Sbjct: 64  CLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSG 123

Query: 327 RS-KEALELFHCMRQSS-VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFV 384
           ++  + +++F  M  S  V+P++ T A+VL  CA    L  GK +H  V+K G + + F 
Sbjct: 124 KNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFA 183

Query: 385 SNALMDVYAKCGEIE-NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
            NAL+ +YAKCG +  ++  +F     ++ V+WN MI G  + G  ++A +LFS M+   
Sbjct: 184 GNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGS 243

Query: 444 MQPTEVTFSSVLRACAGF---AALDPGLQVHSLTIK-TRYNNDIAVANALIDMYAKCGRI 499
           ++P   T +++L  CA F    A   G Q+HS  ++    + D++V NAL+  Y K GR 
Sbjct: 244 VKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRT 303

Query: 500 NDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF-NKMQQTNCKPNKLTFVGVLSA 558
            +A   F  MD R+ VSWN +I GY+++G   ++L++F N +       + +T V +L A
Sbjct: 304 KEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPA 363

Query: 559 CSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVM 618
           C+    L  G+ +   + +   +         +V    + G  +EA      I  +  ++
Sbjct: 364 CAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMIS-RKDLI 422

Query: 619 VWRALLGA 626
            W ++L A
Sbjct: 423 SWNSILDA 430



 Score =  157 bits (396), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 146/260 (56%), Gaps = 5/260 (1%)

Query: 307 MPKKDVIPWSLMIARYAQSDRSKEALELFH-CMRQSSVV-PNNFTFASVLQACAAQVLLI 364
           M +++ + W+  I       R  EAL  FH C++ S+   P++   A++L++C+A +   
Sbjct: 1   MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN 60

Query: 365 LGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYV 424
           LGK +HS V+K G  S    S AL+++YAKCG +++   LF +    + V WN ++ GY 
Sbjct: 61  LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120

Query: 425 QLGDGEK-AMNLFSSM-IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
           + G  +   M +F +M    ++ P+ VT ++VL  CA    L+ G  VH   IK+ +  D
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD 180

Query: 483 IAVANALIDMYAKCGRIN-DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
               NAL+ MYAKCG +  DA   FD +  ++ VSWNAMI G + +GL  EA +LF+ M 
Sbjct: 181 TFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMM 240

Query: 542 QTNCKPNKLTFVGVLSACSN 561
           + + KPN  T   +L  C++
Sbjct: 241 KGSVKPNYATVANILPVCAS 260



 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 198/424 (46%), Gaps = 53/424 (12%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPL---DLFAHNILLNFYVQFDCLDDA 98
           LDS +  ++L    Q  +  AGKQ+H  IL+   P    D  A N L++FY +   +++A
Sbjct: 352 LDSVTMVSILPACAQLDNLQAGKQVHAYILRH--PFLFEDTSAGNALVSFYAKCGYIEEA 409

Query: 99  SKLFDEMPLTNTISFVTL--AQGCSRSH-QFDHALHVILRLFKEGHEVNPFVCT--TIIK 153
              F  +   + IS+ ++  A G  R H +F   LHV+L+L     ++ P   T  TII 
Sbjct: 410 YHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKL-----DIRPDSVTILTIIH 464

Query: 154 LLVSMDLPHVCWTIHACVYKRGH---QADAFVGTSLIDAYSVCGNVDAARQ--------- 201
              S+        IH    + G         VG +++DAYS CGN++ A +         
Sbjct: 465 FCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKR 524

Query: 202 -----------------------VFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
                                  +F G+   D+ +W  MV  YAEN   E++L+LF +++
Sbjct: 525 NLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQ 584

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
             G +P+  TI + +  C  + +  + +  HG  +++ + +DL++   LL+ YAK G I 
Sbjct: 585 TQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIG 643

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
            A   F+    KD++ ++ MI  YA    S++ALE F  M    + P++  F S+L AC+
Sbjct: 644 YAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACS 703

Query: 359 AQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTW 416
               +  G +I  ++ K+ G+   +     ++D+ A+ G +  +     + P E N   W
Sbjct: 704 HAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIW 763

Query: 417 NTMI 420
            T++
Sbjct: 764 GTLL 767



 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 19/313 (6%)

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND--MQPTEVTFSSVLRACAGFAALDPG 467
           ++N +TW + I          +A++ F   + +    +P     +++L++C+   A + G
Sbjct: 3   QRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLG 62

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
             +HS  +K  + +    + AL++MYAKCG ++D    FD+  + + V WN ++ GYS  
Sbjct: 63  KCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRS 122

Query: 528 GLS-TEALNLFNKMQQTN-CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCI 585
           G +  + + +F  M  +    P+ +T   VL  C+ +G L+ G+S+       Y I+   
Sbjct: 123 GKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSV-----HGYVIKSGF 177

Query: 586 EHYT----CMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           E  T     +V +  + G        + +      V+ W A++    + +N  L    + 
Sbjct: 178 EMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAG--LAENGLLKEAFSL 235

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWD-NVASVRKNMKRKGVKKEPGLSW---VENQGVV 697
             L MK      +  ++N+  V   +D N+A          V + P LS    V N  + 
Sbjct: 236 FSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLS 295

Query: 698 HYFSVGDTSHPDN 710
            Y  VG T   ++
Sbjct: 296 FYLKVGRTKEAES 308


>Medtr5g020650.1 | PPR containing plant-like protein | HC |
           chr5:7912169-7910613 | 20130731
          Length = 518

 Score =  332 bits (852), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 169/476 (35%), Positives = 269/476 (56%), Gaps = 33/476 (6%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYA--KSGDIVDAQLFFEEMPKKDVIPWSLMIARYA 323
           K +HG  LK    +     + LL  YA  +  ++  A++ F+ +   + + W+ MI  Y+
Sbjct: 28  KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYS 87

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
            S+  +EAL L+H M   S+  N +TF  +L+AC+A   L    QIH  ++K G  S V+
Sbjct: 88  NSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVY 147

Query: 384 VSNALMDVYA-------------------------------KCGEIENSMILFMESPEQN 412
            +N+L+ VYA                               KCG +E +  +F   PE+N
Sbjct: 148 ATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKN 207

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
            ++W +MIVG+V+ G  ++A+ L   M+   ++P ++T S  L ACAG  AL+ G  +H+
Sbjct: 208 VISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHT 267

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
              K +   D  +  ALIDMY KCG +  A L F K++K+   +W A+I G+++HG  +E
Sbjct: 268 YIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSE 327

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           AL+ F +MQ+   KP   TF  VL+ACS+ GL+++G+SLF+SMS  YN++P +EHY CMV
Sbjct: 328 ALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMV 387

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            LLGR G   EA + +  +P +P+  +W +LL AC + K+++LG+   + ++E+ P  DG
Sbjct: 388 DLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDG 447

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHP 708
            ++ L++++A A  WD  + VR ++K KG+   PG S +   GV H F  G   HP
Sbjct: 448 RYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHP 503



 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 37/397 (9%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVC--GNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
           IH  + K+G        + L+  Y+     N+  AR VFD I   + V W  M+  Y+ +
Sbjct: 30  IHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNS 89

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
              EE+L L+ QM       N YT    LK+C  L A      +H   +K  +  ++Y  
Sbjct: 90  NDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYAT 149

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
             LL +YA SG I  A + F+ +P +D++ W+ MI  Y +    + A ++F  M + +V+
Sbjct: 150 NSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVI 209

Query: 345 -------------------------------PNNFTFASVLQACAAQVLLILGKQIHSNV 373
                                          P+  T +  L ACA    L  GK IH+ +
Sbjct: 210 SWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYI 269

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
            K  +  +  +  AL+D+Y KCGE++ ++++F +  ++   TW  +I G+   G G +A+
Sbjct: 270 GKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEAL 329

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALID 491
           + F+ M    ++PT  TF++VL AC+    ++ G  +   ++ T YN    + +   ++D
Sbjct: 330 DWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFE-SMSTFYNMKPVMEHYGCMVD 388

Query: 492 MYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
           +  + G + +A+   + M  +   + W +++    +H
Sbjct: 389 LLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLH 425



 Score =  140 bits (354), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 160/339 (47%), Gaps = 33/339 (9%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFY--VQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           KQ+H  +LK+G        + LL  Y  ++F  L  A  +FD +   NT+ + T+ +  S
Sbjct: 28  KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYS 87

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
            S+  + AL +  ++       N +    ++K   ++        IH  + KRG  ++ +
Sbjct: 88  NSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVY 147

Query: 182 VGTSL-------------------------------IDAYSVCGNVDAARQVFDGIFCKD 210
              SL                               ID Y  CGNV+ A ++F  +  K+
Sbjct: 148 ATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKN 207

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHG 270
           ++SWT M+  +     ++E+L L  QM V G +P+  T++ +L +C GL A   GK +H 
Sbjct: 208 VISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHT 267

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
              K     D  +G  L+++Y K G++  A L F ++ KK V  W+ +I  +A   +  E
Sbjct: 268 YIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSE 327

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
           AL+ F  M+++ + P +FTF +VL AC+   L+  GK +
Sbjct: 328 ALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSL 366



 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 144/362 (39%), Gaps = 68/362 (18%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFY----------V 90
           P +++++  LL+            Q+H  I+KRG   +++A N LL  Y          V
Sbjct: 108 PHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHV 167

Query: 91  QFDCLDD---------------------ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHA 129
            FD L                       A K+F  MP  N IS+ ++  G  R+     A
Sbjct: 168 LFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEA 227

Query: 130 LHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDA 189
           L ++ ++   G + +    +  +     +        IH  + K   + D  +G +LID 
Sbjct: 228 LCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDM 287

Query: 190 YSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTI 249
           Y  CG +  A  VF  +  K + +WT ++G +A +    E+L  F QM+  G +P ++T 
Sbjct: 288 YVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTF 347

Query: 250 TAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE--LLELYAKSGDIVDAQLFFEEM 307
           TA L +C        GKS+   ++   Y+    +     +++L  ++G + +A+ F E M
Sbjct: 348 TAVLTACSHTGLVEEGKSLFE-SMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESM 406

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
           P K                                  PN   + S+L AC     L LGK
Sbjct: 407 PIK----------------------------------PNAAIWGSLLNACHLHKHLELGK 432

Query: 368 QI 369
           +I
Sbjct: 433 EI 434


>Medtr5g018690.1 | PPR containing protein | HC |
           chr5:6968759-6971652 | 20130731
          Length = 663

 Score =  332 bits (851), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 192/607 (31%), Positives = 318/607 (52%), Gaps = 35/607 (5%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HA +   G          L+ +     ++  A ++FD I   +   +  ++  Y+ +  
Sbjct: 55  VHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSD 114

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
             +SL L+ +M   G  PN +TI   LK+C     + +G  VH  + K        V   
Sbjct: 115 PIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNA 174

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           +L +Y   G I  A+  F+++ ++ ++ W+ MI  Y++  RS+EA+ +F  M++  + P+
Sbjct: 175 ILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPD 234

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE--------- 397
            FT   +L          LG+ +H +++  G++ +  V+NALMD+YAKCG          
Sbjct: 235 VFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFD 294

Query: 398 ----------------------IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNL 435
                                 I+ ++  F + P +N V+WN++I  +VQ G   +A++L
Sbjct: 295 QMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDL 354

Query: 436 FSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
           F  M  + +   + T  ++L +C+    L  G Q HS            + NA+IDMYAK
Sbjct: 355 FYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAK 414

Query: 496 CGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGV 555
           CG +  A   F  M ++  VSWN +I   ++HG   EA+ +F KMQ +   P+++TF G+
Sbjct: 415 CGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGL 474

Query: 556 LSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
           LSACS++GL+D GQ  F+ M+  + I P +EHY CMV LLGR G   EA+ LI ++P +P
Sbjct: 475 LSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKP 534

Query: 616 SVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRK 675
            V+VW ALLGAC    N+ +G+   + +LE+  ++ G +VLLSNMY+ ++RWD++ ++ K
Sbjct: 535 DVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWK 594

Query: 676 NMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNA 735
            + + G+KK   +S++E  G  + F V D  H  +  I +ML  L    + AGY   C  
Sbjct: 595 ILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLKSAGY--PCKH 652

Query: 736 VLLDVED 742
             LDVE+
Sbjct: 653 --LDVEE 657



 Score =  204 bits (520), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 243/500 (48%), Gaps = 37/500 (7%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K +H  I+  G    +     L++  VQ   L  A KLFD++P  N   F  L +G S S
Sbjct: 53  KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNS 112

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
                +L +  R+  +G   N F    ++K   +     +   +HA  +K G  + A V 
Sbjct: 113 SDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQ 172

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            ++++ Y  CG + +AR+VFD I  + +VSW  M+  Y++    EE++ +F +M+ +G  
Sbjct: 173 NAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLE 232

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P+ +T+   L        F +G+ VH   +    + D  V   L+++YAK G++  A+  
Sbjct: 233 PDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSV 292

Query: 304 FEEMPKKDVIPWSLMIARYA-------------------------------QSDRSKEAL 332
           F++M  KDV+ W+ MI  YA                               Q     EA+
Sbjct: 293 FDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAV 352

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVY 392
           +LF+ M  S V+ N+ T  ++L +C+    L LGKQ HS +    +  +  + NA++D+Y
Sbjct: 353 DLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMY 412

Query: 393 AKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
           AKCG ++ +M +F   PE+N V+WN +I      G G++A+ +F  M  + + P E+TF+
Sbjct: 413 AKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFT 472

Query: 453 SVLRACAGFAALDPG---LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
            +L AC+    +D G    ++ +LT     + D+     ++D+  + G + +A     KM
Sbjct: 473 GLLSACSHSGLVDTGQHYFEIMNLTFGI--SPDVEHYACMVDLLGRRGLLGEAISLIKKM 530

Query: 510 D-KREEVSWNAMICGYSMHG 528
             K + V W+A++     +G
Sbjct: 531 PVKPDVVVWSALLGACRTYG 550



 Score =  134 bits (338), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 208/489 (42%), Gaps = 83/489 (16%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G  +H    K G        N +LN YV    +  A ++FD++     +S+ ++  G S+
Sbjct: 153 GVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSK 212

Query: 123 SHQFDHALHVILRLFKEGHEVN--PFVCTTIIKLLVS-----MDLPHVCWTIHACVYKRG 175
             + + A    + +F+E  EV   P V T +  L VS      DL      +H  +   G
Sbjct: 213 MGRSEEA----VLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRF---VHLHMVVTG 265

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA------------- 222
            + D+ V  +L+D Y+ CGN+  A+ VFD +  KD+VSWT M+  YA             
Sbjct: 266 IEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFN 325

Query: 223 ------------------ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV 264
                             +   Y E++ LF +M   G   N+ T+ A L SC  +    +
Sbjct: 326 QMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLAL 385

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           GK  H             +   ++++YAK G +  A   F  MP+K+ + W+++I   A 
Sbjct: 386 GKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALAL 445

Query: 325 SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV-LKVGLDSNVF 383
               KEA+E+F  M+ S V P+  TF  +L AC+   L+  G+     + L  G+  +V 
Sbjct: 446 HGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVE 505

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
               ++D+  + G +  ++ L  + P                                  
Sbjct: 506 HYACMVDLLGRRGLLGEAISLIKKMP---------------------------------- 531

Query: 444 MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT-RYNNDIAVANALIDMYAKCGRINDA 502
           ++P  V +S++L AC  +  L  G Q+    ++  RYN+ + V   L +MY++  R +D 
Sbjct: 532 VKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYV--LLSNMYSESQRWDDM 589

Query: 503 RLTFDKMDK 511
           +  +  +D+
Sbjct: 590 KNIWKILDQ 598



 Score =  123 bits (308), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 32/297 (10%)

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           K +H+ ++  GL + V     L+    +  ++  +  LF + P+ N+  +N +I GY   
Sbjct: 53  KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNS 112

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
            D  K++ L+  M+ + + P + T   VL+ACA  +    G+ VH+ + K    +   V 
Sbjct: 113 SDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQ 172

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           NA++++Y  CG I  AR  FD + +R  VSWN+MI GYS  G S EA+ +F +MQ+   +
Sbjct: 173 NAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLE 232

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ----------------------------- 577
           P+  T VG+LS  +  G  D G+ +   M                               
Sbjct: 233 PDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSV 292

Query: 578 -DYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI 633
            D  ++  +  +TCM+      G  D A++   ++P + +V+ W +++  C VQ+ +
Sbjct: 293 FDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGK-NVVSWNSIIW-CHVQEGL 347


>Medtr4g087150.1 | PPR containing plant-like protein | HC |
           chr4:34147385-34144072 | 20130731
          Length = 724

 Score =  332 bits (850), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 213/680 (31%), Positives = 339/680 (49%), Gaps = 47/680 (6%)

Query: 76  PLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILR 135
           P  + + NI +  + +   L +A  +FDEMPL    S+ T+  G S+  ++  AL ++  
Sbjct: 34  PPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSF 93

Query: 136 LFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGN 195
           +     + N    +  +          +   IH+ ++K G+Q    VG++L+  Y  C  
Sbjct: 94  MHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCG 153

Query: 196 VDAARQVFDG---------------------------IF----CKDMVSWTGMVGCYA-- 222
           +  A  VF+                            IF     +D+V+WT ++  YA  
Sbjct: 154 IREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR 213

Query: 223 -ENCFYEESLQLF-CQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
            + C  E +L LF C  R     PN +T+   L+ C  L    VGK VHG  +K  +D D
Sbjct: 214 EDGC--ERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFD 271

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWS-LMIARYAQSDRSKEALELFHCMR 339
             V + L E Y  S  + DA+  +E M  +     +  +I       R KEA  +F+ +R
Sbjct: 272 NSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLR 331

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
             +++ NN     +++  A        K++   +    L S     N ++ VY+K GE++
Sbjct: 332 DKTLISNNL----MIKGYAMSGQFKKSKKLFEKMSLKHLTS----LNTMITVYSKNGELD 383

Query: 400 NSMILFMESP-EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC 458
            ++ LF ++  E+N VTWN+M+ GY+  G+  +A+ L+ +M    ++ +  TFS + RAC
Sbjct: 384 EAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRAC 443

Query: 459 AGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWN 518
           A   +   G  +H+   KT Y  ++ V  AL+D Y+KCG + DA+ +F  +      +W 
Sbjct: 444 AYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 503

Query: 519 AMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQD 578
           A+I GY+ HG  +EA++ F  M      PN  TFV VLSACS+AGL+D+G   F SM  +
Sbjct: 504 ALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQIN 563

Query: 579 YNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRF 638
           Y I P IEHYTC+V LLGR G+  EA + I ++P +   ++W ALL A     N++LG  
Sbjct: 564 YRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGER 623

Query: 639 CAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVH 698
            A  +  + P+     V LSNMYA   RW     +RK ++   ++K+ G SW+E    VH
Sbjct: 624 AAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVH 683

Query: 699 YFSVGDTSHPDNKLICAMLE 718
            FSV DT+HP + +I   +E
Sbjct: 684 LFSVEDTTHPYSDVIYKTVE 703



 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 5/115 (4%)

Query: 479 YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
           Y   +   N  I  +AK G++ +AR  FD+M  R   SWN MI GYS  G  TEAL L +
Sbjct: 33  YPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS 92

Query: 539 KMQQTNCKPNKLTFVGVLSACSNAGLLDKGQS----LFKSMSQDYN-IEPCIEHY 588
            M  +  K N+++F   LSAC+  G L  G+     LFKS  Q +  +   + HY
Sbjct: 93  FMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHY 147


>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:43569310-43567382 | 20130731
          Length = 526

 Score =  332 bits (850), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 176/482 (36%), Positives = 270/482 (56%), Gaps = 62/482 (12%)

Query: 365 LGKQIHSNVLKVGLDSNVFVSNALM----------------------DV---------YA 393
           +G Q+H  V+K G  S+  V  +L+                      DV         Y 
Sbjct: 1   MGMQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYF 60

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           KCG+++++  LF   P +N VTW+TMI GY++    +KA+ +F  +I   +   EV    
Sbjct: 61  KCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEV---G 117

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
            + ACA   AL  G + +   I+   + ++ +  A++DMYA+CG +  A   F++M +++
Sbjct: 118 AVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKD 177

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK 573
            +SW ++I G +MHG + EAL  F  M +    P  +TF  VL A S+ GL++KGQ +F+
Sbjct: 178 VISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFE 237

Query: 574 SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI 633
           SM +DY +EP +EHY CMV LLGR GK +EA   I E+P +P+                 
Sbjct: 238 SMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKPNA---------------- 281

Query: 634 DLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVEN 693
                       MKP   G + LLSN+YA   +W +   +R+ MK KGV+K+PG S +E 
Sbjct: 282 -----------PMKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYSLIEI 330

Query: 694 QGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHS 753
            G  H F++G+  HP+   I  M E + +K + AGY+ + +  L D++++EKE  L  HS
Sbjct: 331 DGKTHEFTIGNKRHPEIDKIERMWEKILQKIKLAGYMGNTSEALFDIDEEEKEDALHRHS 390

Query: 754 ERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHF-QHG 812
           E+LA+A+G+++I +  +IRI+KNLR+C DCHT  K IS+V   E++VRD NRFHHF ++ 
Sbjct: 391 EKLAIAYGIMKIQAPGTIRIVKNLRVCEDCHTATKFISKVFDVELIVRDRNRFHHFKKYH 450

Query: 813 VC 814
           VC
Sbjct: 451 VC 452



 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 137/241 (56%), Gaps = 4/241 (1%)

Query: 170 CVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEE 229
           C++K   + D    T +I  Y  CG+VD+AR++FD +  K++V+W+ M+  Y  N  +++
Sbjct: 39  CIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDK 98

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
           ++++F  +   G   N      A+ +C  L A   G+  +  A++   D ++ +GT +++
Sbjct: 99  AVEIFEILIDEGLVANE---VGAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVD 155

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
           +YA+ G++  A   FEEM +KDVI W+ +I+  A    ++EALE F+ M ++ +VP + T
Sbjct: 156 MYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDIT 215

Query: 350 FASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           F +VL+A +   L+  G++I  ++ +   L+  +     ++D+  + G++E +    +E 
Sbjct: 216 FTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEM 275

Query: 409 P 409
           P
Sbjct: 276 P 276



 Score =  120 bits (302), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 127/233 (54%), Gaps = 4/233 (1%)

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
           C  K     D+   T +++ Y K GD+  A+  F+ MP K+++ WS MI  Y +++   +
Sbjct: 39  CIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDK 98

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD 390
           A+E+F  +    +V N       + ACA    L  G++ + + +++ LD NV +  A++D
Sbjct: 99  AVEIFEILIDEGLVANE---VGAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVD 155

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           +YA+CG +E ++ +F E  E++ ++W ++I G    G  E+A+  F  M+ N + P ++T
Sbjct: 156 MYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDIT 215

Query: 451 FSSVLRACAGFAALDPGLQV-HSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
           F++VL+A +    ++ G ++  S+    R    +     ++D+  + G++ +A
Sbjct: 216 FTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEA 268



 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 46/300 (15%)

Query: 70  ILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHA 129
           I K     D+ +   ++  Y +   +D A KLFD MP+ N +++ T+  G  R++ FD A
Sbjct: 40  IFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKA 99

Query: 130 LHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQA----------- 178
           + +   L  EG              LV+ ++  V    H      G +A           
Sbjct: 100 VEIFEILIDEG--------------LVANEVGAVSACAHLGALAAGEKAYEHAIRINLDL 145

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
           +  +GT+++D Y+ CGNV+ A +VF+ +  KD++SWT ++   A + + EE+L+ F  M 
Sbjct: 146 NVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMV 205

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVH-GCALKACYDQDLYVGTEL------LELY 291
             G  P + T TA LK      A+  G  V  G  +     +D  +   L      ++L 
Sbjct: 206 KNGIVPRDITFTAVLK------AYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLL 259

Query: 292 AKSGDIVDAQLFFEEMPKKDVIP--------WSLMIARYAQSDRSKEALELFHCMRQSSV 343
            ++G + +A+ F  EMP K   P        ++L+   YA++++ K+A  +   M++  V
Sbjct: 260 GRAGKLEEAENFILEMPIKPNAPMKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGV 319


>Medtr8g028890.1 | PPR containing plant-like protein | HC |
           chr8:11200768-11198782 | 20130731
          Length = 655

 Score =  331 bits (849), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 184/556 (33%), Positives = 304/556 (54%), Gaps = 18/556 (3%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM----VGCYA 222
           +HA + K G      +   ++  Y  C   + A+++F+ +  +++VSW  M    VG   
Sbjct: 82  LHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRND 141

Query: 223 EN-------CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
           EN       CF       F +M +    P++ T    +  C       +G  +H   +K 
Sbjct: 142 ENESSGMRLCF-----SYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKV 196

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
            +D D +VG  L+ LYAK G + +A+  F ++  +D++ W++M++ Y  +   +EA  +F
Sbjct: 197 GFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVF 256

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLI--LGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           + MR   V  + FTF+S+L   +   L     GKQ+HS VL+   DS+V V++AL+++YA
Sbjct: 257 NSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYA 316

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           K   I ++  +F E   +N V WNTMIVG+   GDG + M L   M+     P E+T SS
Sbjct: 317 KSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISS 376

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           ++ +C   +A+   LQVH+  +K    + ++VAN+LI  Y+KCG I  A   F+   + +
Sbjct: 377 IISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPD 436

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK 573
            V+W ++I  Y+ HGL+ ++  +F KM     KP+++ F+GVLSAC++ GL+ KG   FK
Sbjct: 437 LVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFK 496

Query: 574 SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI 633
            M+  Y I P  EHYTC+V LLGR G  +EA +++  +P +       A +G+C +  N+
Sbjct: 497 LMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNM 556

Query: 634 DLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVEN 693
           +L +  A+ +  ++P     + ++SN++A  K W +V  +RK M+ K   K PG SW+E 
Sbjct: 557 ELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEI 616

Query: 694 QGVVHYFSVGDTSHPD 709
              +H F   D SHP+
Sbjct: 617 GNQIHSFVSNDKSHPN 632



 Score =  217 bits (552), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 228/454 (50%), Gaps = 19/454 (4%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISF-VTLAQGCS 121
           GKQLH  ++K G    L   N +L+ Y++    +DA KLF+E+P+ N +S+ + +     
Sbjct: 79  GKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVG 138

Query: 122 RSHQ---------FDHALHVILRLFKEGH-EVNPFVCTTIIKLLVSMDLPHVCWTIHACV 171
           R+ +         F +   ++L +    H   N  +C       + M +   C+T+    
Sbjct: 139 RNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTV---- 194

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESL 231
            K G   D FVG +L+  Y+ CG V+ AR+VF  + C+D+V W  MV CY  N   EE+ 
Sbjct: 195 -KVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAF 253

Query: 232 QLFCQMRVMGYRPNNYTITAALK--SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
           ++F  MR+     + +T ++ L   S   LE +  GK VH   L+  +D D+ V + L+ 
Sbjct: 254 RVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALIN 313

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
           +YAKS +I+DA+  F+EM  ++V+ W+ MI  +       E ++L   M +   +P+  T
Sbjct: 314 MYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELT 373

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
            +S++ +C     +    Q+H+  +K+     + V+N+L+  Y+KCG I ++   F  + 
Sbjct: 374 ISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTS 433

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
           + + VTW ++I  Y   G  EK+  +F  M+   ++P  + F  VL ACA    +  GL 
Sbjct: 434 QPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLH 493

Query: 470 VHSL-TIKTRYNNDIAVANALIDMYAKCGRINDA 502
              L T   +   D      L+D+  + G IN+A
Sbjct: 494 YFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEA 527



 Score =  111 bits (277), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 170/372 (45%), Gaps = 7/372 (1%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  ++  L+    Q      G QLHC  +K G  LD F    L+  Y +   +++A ++F
Sbjct: 166 DHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVF 225

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
            ++   + + +  +      +   + A  V   +  +    + F  ++++ ++    L +
Sbjct: 226 CDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEY 285

Query: 163 VCW--TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
             +   +H+ V ++   +D  V ++LI+ Y+   N+  AR+VFD +  +++V+W  M+  
Sbjct: 286 YDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVG 345

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           +  +    E ++L  +M   G+ P+  TI++ + SC    A      VH  A+K      
Sbjct: 346 FGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDF 405

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           L V   L+  Y+K G I  A   FE   + D++ W+ +I  YA    ++++ E+F  M  
Sbjct: 406 LSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLS 465

Query: 341 SSVVPNNFTFASVLQACAAQVLLILGK---QIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
             + P+   F  VL ACA   L+  G    ++ +N  ++  DS  +    L+D+  + G 
Sbjct: 466 YGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYT--CLVDLLGRYGL 523

Query: 398 IENSMILFMESP 409
           I  +  +    P
Sbjct: 524 INEAFEILRSMP 535


>Medtr5g098860.1 | PPR containing plant-like protein | HC |
           chr5:43289378-43292142 | 20130731
          Length = 828

 Score =  330 bits (846), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 205/717 (28%), Positives = 367/717 (51%), Gaps = 16/717 (2%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDL----FAHNILLNFYVQFDCLDD 97
            D +++++ L+     +    GK +H   L+  +  +       +N LLN Y    C  +
Sbjct: 115 FDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYA--SCQHE 172

Query: 98  -ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLV 156
            A  +FD M   N +++ TL     + +++  A+     +  +    +P     +   L 
Sbjct: 173 YALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALS 232

Query: 157 SMDLPHVCWTIHACVYKRGHQ--ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
            +         +  + K G Q  +D FV +S I  +S  G +D AR VFD    K+   W
Sbjct: 233 KLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIW 292

Query: 215 TGMVGCYAENCFYEESLQLFCQ-MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
             M+  Y +N    E++ +F Q +       ++ T+ + L +   L+   + +  H   +
Sbjct: 293 NTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVI 352

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K+     + +   ++ +Y++   +  +   F++M ++D + W+ +I+ + Q+   +EAL 
Sbjct: 353 KSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALM 412

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           L   M++   + ++ T  ++L A +    L +GKQ H+ +++ G+      S  L+D+YA
Sbjct: 413 LVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMES-YLIDMYA 471

Query: 394 KCGEIENSMILFME--SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTF 451
           K G I  + +LF +  S ++++ TWN +I GY Q G  EKA+ L   M+  ++ P  VT 
Sbjct: 472 KSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTL 531

Query: 452 SSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK 511
           +S+L AC+   ++    Q+H  +I+     ++ V  +L D Y+KCG I+ A   F +  +
Sbjct: 532 ASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPE 591

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           +  V++  M+  Y  HG+   AL L++ M ++  +P+ +TFV +LSAC+ +GL+D+G  +
Sbjct: 592 KNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQI 651

Query: 572 FKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVM-VWRALLGACVVQ 630
           F+SM + + I+P IEHY C+  +LGR+G+  EA + +  +    + M +W +LLG+C   
Sbjct: 652 FESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNH 711

Query: 631 KNIDLGRFCAQHVLE--MKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGL 688
            + +LG+  A+ +L   M     G HVLLSN+YA    W+ V  VRK MK KG+ KE G 
Sbjct: 712 GHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGC 771

Query: 689 SWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEK 745
           SWVE  G V+ F   D  HP +  I  ML+ L    + AGY P  +  L  + D ++
Sbjct: 772 SWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYSLNLNTILDSDE 828



 Score =  107 bits (268), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 143/268 (53%), Gaps = 12/268 (4%)

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP--NNFTFASVLQACAAQ 360
             + +P+   + W+ +I  +  ++   +AL L+  MR +S     + +TF+S L+ACA  
Sbjct: 71  LLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALT 130

Query: 361 VLLILGKQIHSNVLKVGLDSNV----FVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
             ++ GK IHS+ L+   ++N      V N+L+++YA C + E ++ +F     +N V W
Sbjct: 131 KDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC-QHEYALNVFDVMRRRNVVAW 189

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
           NT+I+ +V++    +A+  F++MI   + P+ VTF ++  A +           +    K
Sbjct: 190 NTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRK 249

Query: 477 --TRYNNDIAVANALIDMYAKCGRINDARLTFDK-MDKREEVSWNAMICGYSMHGLSTEA 533
              +Y +D+ V ++ I M++  G ++ AR+ FD+ ++K  E+ WN MI  Y  +    EA
Sbjct: 250 FGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEI-WNTMIVAYVQNNCPVEA 308

Query: 534 LNLF-NKMQQTNCKPNKLTFVGVLSACS 560
           +++F   ++      + +T + VL+A S
Sbjct: 309 IDVFIQALESEEGVCDDVTLLSVLTAVS 336



 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 7/161 (4%)

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPT--EVTFSSVLRACAGFAALDP 466
           P  + V WN++I+G++      +A+ L++ M  N    T    TFSS L+ACA    +  
Sbjct: 76  PRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILT 135

Query: 467 GLQVHSLTIKTRYNNDIA----VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
           G  +HS  +++  N +      V N+L++MYA C     A   FD M +R  V+WN +I 
Sbjct: 136 GKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLIL 194

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAG 563
            +       +A+  F  M   +  P+ +TFV +  A S  G
Sbjct: 195 SFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLG 235


>Medtr8g063450.1 | PPR containing plant-like protein | HC |
           chr8:26602939-26605163 | 20130731
          Length = 699

 Score =  330 bits (845), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 199/658 (30%), Positives = 341/658 (51%), Gaps = 22/658 (3%)

Query: 67  HCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQF 126
           HC  +K G+  DL+  N L+  Y +   L  A +LFD+MP  +T+S+  +  G   +   
Sbjct: 22  HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADL 81

Query: 127 DHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSL 186
           D    ++  +   GH  +     + +K +       +   +H+ + K     + F G++L
Sbjct: 82  DSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSAL 141

Query: 187 IDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNN 246
           +D Y+ CG VD A  VF  +   + VSW  ++  Y+     + +  L     + G   ++
Sbjct: 142 LDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDD 201

Query: 247 YTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFE- 305
            T++  L    G+  + +   +H   +K   +    V   ++  Y++   + DA+  F  
Sbjct: 202 GTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVG 261

Query: 306 --EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
              +  +D++ W+ M+A Y    +   A ++F  M+     P+++++  V+  C+ +   
Sbjct: 262 AVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHK 321

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYA----KCGEIENSMILFMESPEQNEVTWNTM 419
             G+ +H  V+K G + +V VSNAL+ +Y     +C  +E+++ +F     ++  TWN++
Sbjct: 322 SRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTWNSV 379

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           + GYVQ+G  E A+ LF  +    ++  + TFS+V+R C+  A L  G QVH L++K  +
Sbjct: 380 LAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGF 439

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
           + +  V               DA+  F+       + WN++I GY+ HG    AL LF  
Sbjct: 440 DTNKYVGK-------------DAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYL 486

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           M++   KP+ +TFV VL+ACS+ GL+++G+ + +SM  D+ I   +EHY C V L GR G
Sbjct: 487 MREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAG 546

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN 659
             +E   L+  +PF+P  MV R LLGAC    NI+L    A+ +L ++P D  T+VLLS+
Sbjct: 547 YLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSD 606

Query: 660 MYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAML 717
           +Y   K WD  ASV + M+ +GVKK PG SW+E +  VH F+  D SHP +K I  +L
Sbjct: 607 LYGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYELL 664



 Score =  196 bits (498), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 237/475 (49%), Gaps = 21/475 (4%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
            D+H++ + L+   + +    G+QLH  ++K     ++F+ + LL+ Y +   +DDA  +
Sbjct: 98  FDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVV 157

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           F  MP  N +S+ TL  G SR    D A  ++     EG  ++    + ++ LL  +   
Sbjct: 158 FRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFY 217

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDG---IFCKDMVSWTGMV 218
            +   +H  + K G +A   V  ++I AYS C ++  A +VF G   + C+D+V+W  M+
Sbjct: 218 SLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSML 277

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
             Y  +     +  +F +M+  G+ P++Y+ T  +  C   E    G+S+HG  +K   +
Sbjct: 278 AAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAE 337

Query: 279 QDLYVGTELLELYAKSGD--IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH 336
             + V   L+ +Y    +  + DA   F  M  KD   W+ ++A Y Q  RS++AL LF 
Sbjct: 338 VSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFV 397

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
            +R   V  +++TF++V++ C+    L LG+Q+H   LKVG D+N +V         KC 
Sbjct: 398 QVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTNKYVGKDA----KKC- 452

Query: 397 EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
                   F  +   N + WN++I GY Q G G  A+ LF  M    ++P  +TF +VL 
Sbjct: 453 --------FETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLT 504

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKM 509
           AC+    ++ G ++   ++++ +   + + +    +D+Y + G + + +   + M
Sbjct: 505 ACSHNGLVEEGRKIIQ-SMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETM 558



 Score =  170 bits (431), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 164/309 (53%), Gaps = 3/309 (0%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
           ++ H  A+K+    DLY    L+  Y+K   +  A   F++MP++D + W+ +I+ Y  +
Sbjct: 19  QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
                  +L + MR S    +N TF S L+  A    L LG+Q+HS ++K+ L+ NVF  
Sbjct: 79  ADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSG 138

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
           +AL+D+YAKCG +++++++F   PE N V+WNT+I GY ++GD + A  L        + 
Sbjct: 139 SALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVG 198

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLT 505
             + T S +L    G       +Q+H   +K        V NA+I  Y++C  + DA   
Sbjct: 199 IDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERV 258

Query: 506 F---DKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA 562
           F     +  R+ V+WN+M+  Y +H     A ++F +MQ    +P+  ++ GV+S CS  
Sbjct: 259 FVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIK 318

Query: 563 GLLDKGQSL 571
               +G+SL
Sbjct: 319 EHKSRGESL 327


>Medtr6g066360.1 | PPR containing plant-like protein | HC |
           chr6:24701161-24699312 | 20130731
          Length = 563

 Score =  329 bits (844), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 300/543 (55%), Gaps = 11/543 (2%)

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
           + +PH    +H  V++ G QAD FV TSL+D YS C  +++AR+VFD +  + +VSW  +
Sbjct: 24  LSIPHGT-MLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSL 82

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALK----SCLGLEAFGVGKSVHGCAL 273
           +  Y      E++L L  +M V+G++P++ T  + L     +    E    G S+H   +
Sbjct: 83  ISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVI 142

Query: 274 K---ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
           K    C++  L     L+ +YA+ G + +A+  F+ M +K ++ W+ ++  Y +   S E
Sbjct: 143 KLGLVCFEVSL--DNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVE 200

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD 390
           A++LF+ M+  ++  +   F +++  C      +L   +HS VLK G      + N L+ 
Sbjct: 201 AVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLT 260

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           +YA+CG + ++ I+F     ++ ++W +MI GY      ++A++LF  M+  +++P   T
Sbjct: 261 MYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRAT 320

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD 510
            ++VL ACA   +L  G ++     +  +  D+ V  +L+ MY+KCG IN AR  F++++
Sbjct: 321 LATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVE 380

Query: 511 KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN-CKPNKLTFVGVLSACSNAGLLDKGQ 569
            ++   W++MI  Y +HG+  EA++LF KM      KP+ + +  +L ACS++GL++ G 
Sbjct: 381 NKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGL 440

Query: 570 SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
             FKSM  D+ I P  EHYTC+V LL R+G+ D A+  I  +P          LL AC +
Sbjct: 441 KYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDTIEAMPTDVQAEALSPLLSACRI 500

Query: 630 QKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
             NI+LG   A  +L++ P    ++V ++N+Y    +W    ++R  +  KG+ KE G S
Sbjct: 501 HGNIELGELVAAKLLDVSPKSSSSYVGVANLYNSVGKWKEANTMRNMIDGKGMVKECGWS 560

Query: 690 WVE 692
            V+
Sbjct: 561 QVQ 563



 Score =  188 bits (477), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 230/455 (50%), Gaps = 9/455 (1%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G  LH  + + G   D F    L++ Y +   ++ A K+FDEMP  + +S+ +L      
Sbjct: 29  GTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCH 88

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS-MDLPHVCW---TIHACVYKRGHQA 178
               + AL +I  +   G + +     +I+    S ++     W   ++H  V K G   
Sbjct: 89  ESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVC 148

Query: 179 -DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
            +  +  SL+  Y+  G +D AR+VFD +  K +VSWT ++G Y +     E+++LF +M
Sbjct: 149 FEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEM 208

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK-ACYDQDLYVGTELLELYAKSGD 296
           +      +       +  C+ L    +  SVH   LK  C+++D  +   LL +YA+ G+
Sbjct: 209 QHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEED-SIKNLLLTMYARCGN 267

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
           +  A++ F+ + +K V+ W+ MIA YA S R KEAL+LF  M  + + PN  T A+VL A
Sbjct: 268 LTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSA 327

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
           CA    L +G++I     + G ++++ V  +L+ +Y+KCG I  +  +F     ++   W
Sbjct: 328 CADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLW 387

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGFAALDPGLQ-VHSLT 474
           ++MI  Y   G G +A++LF  M   + ++P  + ++S+L AC+    ++ GL+   S+ 
Sbjct: 388 SSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQ 447

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
                         L+D+ A+ G+++ A  T + M
Sbjct: 448 TDFGITPTKEHYTCLVDLLARVGQLDLALDTIEAM 482



 Score =  184 bits (468), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 204/387 (52%), Gaps = 7/387 (1%)

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFF 304
           N +T     KSC  L +   G  +HG   +  +  D +V T L+++Y+K   I  A+  F
Sbjct: 9   NTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVF 68

Query: 305 EEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV--- 361
           +EMP++ V+ W+ +I+ Y      ++AL L   M      P++ TF S+L   ++ +   
Sbjct: 69  DEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSF 128

Query: 362 -LLILGKQIHSNVLKVGLDS-NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
             L  G  +H  V+K+GL    V + N+LM +YA+ G+++ +  +F    E+  V+W T+
Sbjct: 129 EFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTI 188

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           + GYV++G   +A+ LF+ M   ++    + F +++  C           VHSL +K   
Sbjct: 189 MGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGC 248

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
           + + ++ N L+ MYA+CG +  AR+ FD + ++  +SW +MI GY+      EAL+LF +
Sbjct: 249 HEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRR 308

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           M  T  KPN+ T   VLSAC++ G L  G+ + +  + +   E  ++  T +V +  + G
Sbjct: 309 MVMTEIKPNRATLATVLSACADLGSLCIGEEI-EQYAFENGFETDLQVQTSLVHMYSKCG 367

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGA 626
             ++A ++   +     + +W +++ +
Sbjct: 368 NINKAREVFERVE-NKDLTLWSSMINS 393



 Score =  144 bits (364), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 132/227 (58%), Gaps = 5/227 (2%)

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M  SSV  N FT+  + ++CA  + +  G  +H +V ++G  ++ FV  +L+D+Y+KC  
Sbjct: 1   MHHSSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSV 60

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           IE++  +F E PE++ V+WN++I  Y      EKA++L   M+    +P+  TF S+L  
Sbjct: 61  IESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSG 120

Query: 458 CA----GFAALDPGLQVHSLTIKTRYN-NDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
            +     F  L  G+ +H   IK      ++++ N+L+ MYA+ G++++AR  FD MD++
Sbjct: 121 YSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEK 180

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSAC 559
             VSW  ++ GY   G S EA+ LFN+MQ  N   + + FV ++S C
Sbjct: 181 TIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGC 227



 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 9/185 (4%)

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           T+  + ++CA   ++  G  +H    +  +  D  V  +L+DMY+KC  I  AR  FD+M
Sbjct: 12  TYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEM 71

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
            +R  VSWN++I  Y    +  +AL+L  +M     KP+  TFV +LS  S+   L+  +
Sbjct: 72  PERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSN--LNSFE 129

Query: 570 SLFKSMSQD-YNIE---PCIEHY--TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRAL 623
            L++ MS   + I+    C E      ++G+  + G+ DEA K+  +   + +++ W  +
Sbjct: 130 FLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVF-DFMDEKTIVSWTTI 188

Query: 624 LGACV 628
           +G  V
Sbjct: 189 MGGYV 193



 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 5/218 (2%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD   +  L+   IQ R       +H  +LK G   +    N+LL  Y +   L  A  +
Sbjct: 215 LDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARII 274

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD +   + +S+ ++  G + S +   AL +  R+     E+ P   T    L    DL 
Sbjct: 275 FDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMT--EIKPNRATLATVLSACADLG 332

Query: 162 HVCW--TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
            +C    I    ++ G + D  V TSL+  YS CGN++ AR+VF+ +  KD+  W+ M+ 
Sbjct: 333 SLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMIN 392

Query: 220 CYAENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSC 256
            Y  +    E++ LF +M      +P+    T+ L +C
Sbjct: 393 SYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLFAC 430


>Medtr2g021710.1 | PPR containing plant-like protein | HC |
           chr2:7399056-7396074 | 20130731
          Length = 727

 Score =  329 bits (843), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 197/620 (31%), Positives = 305/620 (49%), Gaps = 99/620 (15%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNV------------------------------ 196
           IH+ ++K G   + F+  SLI+ Y+ CG++                              
Sbjct: 75  IHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQ 134

Query: 197 -DAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
            D AR++FD +  K  VS+T M+  + +N F+ E+L++F  MR  G  PN+ T+   + +
Sbjct: 135 IDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISA 194

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK------ 309
           C  L      + VHG  +K      + V T L+  Y     + +A+  F+EMP+      
Sbjct: 195 CSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTW 254

Query: 310 -------------------------KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
                                    KDVI W  MI  Y Q  R +EALE++  M Q+   
Sbjct: 255 NVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHG 314

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE------- 397
           PN     +++ AC     ++ G Q+H  V+K G D   F+   ++  YA CG        
Sbjct: 315 PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQ 374

Query: 398 -------------------IENSMI-----LFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
                              I+N M+      F +   ++  +W+TMI GY Q    + A+
Sbjct: 375 FEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMAL 434

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
            LF  M+   ++P EVT  SV  A A    L  G   H          +  +  ALIDMY
Sbjct: 435 ELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMY 494

Query: 494 AKCGRINDARLTFDKMDKREEVS----WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNK 549
           AKCG IN A   F+++  R+EVS    WNA+ICG + HG ++  L +F+ MQ+ + KPN 
Sbjct: 495 AKCGSINSALQFFNQI--RDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNP 552

Query: 550 LTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIG 609
           +TF+GVLSAC +AGL++ G+ +FK+M   YN+EP I+HY CM+ +LGR G  +EA ++I 
Sbjct: 553 ITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIR 612

Query: 610 EIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDN 669
            +P +  +++W  LL AC    N+++G   A+++  + P   G  VLLSN+YA A +W+ 
Sbjct: 613 SMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEE 672

Query: 670 VASVRKNMKRKGVKKEPGLS 689
           V+ VR  M+ + + +EPG S
Sbjct: 673 VSFVRSVMQGQTMDREPGYS 692



 Score =  184 bits (468), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 235/550 (42%), Gaps = 69/550 (12%)

Query: 47  YAALLQQAIQNRHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +   +Q ++ N +   G   +  +L  G A LD  + NI+++ YV+   +D+A KLFD M
Sbjct: 86  FNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVM 145

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
           P    +S+ T+  G  ++  F  AL V   +   G   N      +I     +     C 
Sbjct: 146 PNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCR 205

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVC-------------------------------G 194
            +H  V K        V T+L+ AY +C                               G
Sbjct: 206 MVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTG 265

Query: 195 NVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALK 254
            VD AR++FDGI  KD++SW  M+  Y +     E+L+++  M   G+ PN   I   + 
Sbjct: 266 LVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVS 325

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYA---------------------- 292
           +C    A   G  +HG  +K  +D   ++ T ++  YA                      
Sbjct: 326 ACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLES 385

Query: 293 ---------KSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
                    K+G +  A   F++M  +DV  WS MI+ YAQS+  K ALELFH M    +
Sbjct: 386 WNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGI 445

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMI 403
            PN  T  SV  A A    L  GK  H  +    +  N  +  AL+D+YAKCG I +++ 
Sbjct: 446 KPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQ 505

Query: 404 LFME-SPEQNEVT-WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
            F +   E + V+ WN +I G    G     + +FS M    ++P  +TF  VL AC   
Sbjct: 506 FFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHA 565

Query: 462 AALDPGLQVHSLTIKTRYN--NDIAVANALIDMYAKCGRINDARLTFDKMDKREE-VSWN 518
             ++ G ++   T+K+ YN   DI     +ID+  + G + +A      M    + V W 
Sbjct: 566 GLVESGKRIFK-TMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWG 624

Query: 519 AMICGYSMHG 528
            ++     HG
Sbjct: 625 TLLAACRTHG 634



 Score =  166 bits (421), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 199/470 (42%), Gaps = 95/470 (20%)

Query: 249 ITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEE-- 306
           + +ALKSC  L     G+ +H    K     + ++   L+ +YAK GDI +AQL F+   
Sbjct: 56  LVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFA 115

Query: 307 -----------------------------MPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
                                        MP K  + ++ MI  + Q+   +EALE+F  
Sbjct: 116 TLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKD 175

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           MR   VVPN+ T  +V+ AC+    ++  + +H  V+K+ +   V VS  LM  Y  C  
Sbjct: 176 MRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSG 235

Query: 398 IENSMILFMESPEQNEVTWN-------------------------------TMIVGYVQL 426
           +  +  LF E PE+N VTWN                               TMI GY+Q 
Sbjct: 236 VREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQK 295

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
           G   +A+ ++ +M+     P EV   +++ AC    A+  G Q+H   +K  ++    + 
Sbjct: 296 GRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQ 355

Query: 487 NALIDMYAKCGRINDARL-------------------------------TFDKMDKREEV 515
             +I  YA CG ++ A L                               TFDKM  R+  
Sbjct: 356 TTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVF 415

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           SW+ MI GY+       AL LF+KM     KPN++T V V SA +  G L +G+   + M
Sbjct: 416 SWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM 475

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ-PSVMVWRALL 624
             + +I         ++ +  + G  + A++   +I  +  SV  W A++
Sbjct: 476 RSE-SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAII 524



 Score =  120 bits (300), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 35/263 (13%)

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           +     S L++C++   +  G+QIHS + K+GL  N F+ N+L+++YAKCG+I+N+ +LF
Sbjct: 52  SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111

Query: 406 -----MES--------------------------PEQNEVTWNTMIVGYVQLGDGEKAMN 434
                ++S                          P +  V++ TMI+G+VQ G   +A+ 
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYA 494
           +F  M    + P ++T  +V+ AC+    +     VH L +K      + V+  L+  Y 
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231

Query: 495 KCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVG 554
            C  + +AR  FD+M +R  V+WN M+ GY+  GL  EA  LF+ +    C  + +++  
Sbjct: 232 LCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGI----CDKDVISWGT 287

Query: 555 VLSACSNAGLLDKGQSLFKSMSQ 577
           ++      G L +   ++++M Q
Sbjct: 288 MIDGYIQKGRLREALEIYRAMLQ 310


>Medtr7g082690.1 | PPR containing plant-like protein | HC |
           chr7:31706993-31708834 | 20130731
          Length = 503

 Score =  328 bits (842), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 175/505 (34%), Positives = 285/505 (56%), Gaps = 6/505 (1%)

Query: 190 YSVCGNVDAARQVFDGIFCKDMVSWTG-MVGCYAENCFYEESLQLFCQMRVMGY-RPNNY 247
           Y  C ++ +A Q+FD +  +++VSW+  M GC   N    ++L LF  M   G+ +PN +
Sbjct: 2   YIKCKDLTSALQLFDEMPERNVVSWSSVMTGC-VHNGGASDALSLFSCMHREGFVKPNEF 60

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           T  +AL++C   E       ++   +++  + ++++    L    ++G + +A   FE  
Sbjct: 61  TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 120

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAAQVLLILG 366
           P +D + W+ M+  Y +   S E + +F   M +  V P+ FTFAS L   A    L +G
Sbjct: 121 PIRDTVTWNTMMGGYLE--FSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMG 178

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
            Q+H+ +++ G   ++ V N+L+D+Y K  ++E     F E P ++  +W  M  G +Q 
Sbjct: 179 MQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQW 238

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
           G+   A+ + + M    ++P + T ++ L ACA  A+++ G Q H L IK   + D+ V 
Sbjct: 239 GEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVD 298

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           NAL+DMYAKCG ++ A   F   + R  VSW  MI   + +G   EAL +F++M++T+ +
Sbjct: 299 NALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVE 358

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
           PN +TF+ VL ACS  G +D+G     SM +DY I P  +HY CMV +LGR G   EA +
Sbjct: 359 PNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKE 418

Query: 607 LIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKR 666
           LI  +PF P V VW+ LL AC +  +++ G+  A+H ++   +D  ++VLLSNM A    
Sbjct: 419 LILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSN 478

Query: 667 WDNVASVRKNMKRKGVKKEPGLSWV 691
           WD V S+R+ M+ + VKK PG SW+
Sbjct: 479 WDCVVSLRELMETRNVKKVPGSSWI 503



 Score =  192 bits (487), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 220/450 (48%), Gaps = 16/450 (3%)

Query: 88  FYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGH-EVNPF 146
            Y++   L  A +LFDEMP  N +S+ ++  GC  +     AL +   + +EG  + N F
Sbjct: 1   MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60

Query: 147 VCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGI 206
              + ++     +     + I++ V + G + + F+  + + A    G +  A Q+F+  
Sbjct: 61  TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 120

Query: 207 FCKDMVSWTGMVGCYAENCFYEESLQLFCQ-MRVMGYRPNNYTITAALKSCLGLEAFGVG 265
             +D V+W  M+G Y E  F  E + +F + M   G +P+ +T  +AL     + +  +G
Sbjct: 121 PIRDTVTWNTMMGGYLE--FSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMG 178

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
             VH   +++ Y  D+ VG  L+++Y K+  + +    F+E+P KDV  W+ M     Q 
Sbjct: 179 MQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQW 238

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
              + AL +   M++  V PN FT A+ L ACA    +  GKQ H   +K+G D +V V 
Sbjct: 239 GEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVD 298

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
           NAL+D+YAKCG ++++  +F  +  ++ V+W TMI+   Q G   +A+ +F  M    ++
Sbjct: 299 NALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVE 358

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANA------LIDMYAKCGRI 499
           P  +TF  VL AC+    +D G +  S       + D  +         ++ +  + G I
Sbjct: 359 PNYITFICVLYACSQGGFVDEGWKYLS-----SMDKDYGIIPGEDHYICMVSILGRAGLI 413

Query: 500 NDARLTFDKMDKREEVS-WNAMICGYSMHG 528
            +A+    +M     V  W  ++    +HG
Sbjct: 414 KEAKELILRMPFHPGVRVWQTLLSACQIHG 443



 Score =  185 bits (469), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 184/340 (54%), Gaps = 6/340 (1%)

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM-RQSSVVPNNF 348
           +Y K  D+  A   F+EMP+++V+ WS ++     +  + +AL LF CM R+  V PN F
Sbjct: 1   MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60

Query: 349 TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           TF S LQAC+    +    QI+S V++ GL+ NVF+ NA +    + G++  ++ +F  S
Sbjct: 61  TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 120

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
           P ++ VTWNTM+ GY++    E+    +  M    ++P E TF+S L   A  ++L  G+
Sbjct: 121 PIRDTVTWNTMMGGYLEF-SSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM 179

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           QVH+  +++ Y +DI V N+L+DMY K  ++ +    FD++  ++  SW  M  G    G
Sbjct: 180 QVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWG 239

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK-SMSQDYNIEPCIEH 587
               AL +  KM++   KPNK T    L+AC+    +++G+      +    +++ C+++
Sbjct: 240 EPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDN 299

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGAC 627
              ++ +  + G  D A  +      + SV+ W  ++ AC
Sbjct: 300 --ALLDMYAKCGCMDSAWTVFRSTNSR-SVVSWTTMIMAC 336



 Score =  137 bits (344), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 186/395 (47%), Gaps = 13/395 (3%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           +  ++ + LQ    + +     Q++  +++ G   ++F  N  L   V+   L +A ++F
Sbjct: 58  NEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIF 117

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF-KEGHEVNPFVCTTIIKLLVSMDLP 161
           +  P+ +T+++ T+  G          + V  R   +EG + + F   + +  L ++   
Sbjct: 118 ETSPIRDTVTWNTMMGGYLEFSS--EQIPVFWRYMNREGVKPDEFTFASALTGLATISSL 175

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            +   +HA + + G+  D  VG SL+D Y     ++   + FD I  KD+ SWT M    
Sbjct: 176 KMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQM---- 231

Query: 222 AENCFY----EESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           A+ C        +L +  +M+ MG +PN +T+  AL +C  L +   GK  HG  +K   
Sbjct: 232 ADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGS 291

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           D D+ V   LL++YAK G +  A   F     + V+ W+ MI   AQ+ +  EAL++F  
Sbjct: 292 DVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDE 351

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCG 396
           M+++SV PN  TF  VL AC+    +  G +  S++ K  G+         ++ +  + G
Sbjct: 352 MKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAG 411

Query: 397 EIENSMILFMESPEQNEV-TWNTMIVGYVQLGDGE 430
            I+ +  L +  P    V  W T++      GD E
Sbjct: 412 LIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVE 446



 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 123/241 (51%), Gaps = 8/241 (3%)

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEV 449
           +Y KC ++ +++ LF E PE+N V+W++++ G V  G    A++LFS M     ++P E 
Sbjct: 1   MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60

Query: 450 TFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKM 509
           TF S L+AC+    +    Q++SL +++    ++ + NA +    + G++ +A   F+  
Sbjct: 61  TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 120

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNK-MQQTNCKPNKLTFVGVLSACSNAGLLDKG 568
             R+ V+WN M+ GY     S+E + +F + M +   KP++ TF   L+  +    L  G
Sbjct: 121 PIRDTVTWNTMMGGY--LEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMG 178

Query: 569 QSLFKSMSQD-YNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGAC 627
             +   + +  Y  + C+ +   +V +  +  K +E  K   EIP +  V  W  +   C
Sbjct: 179 MQVHAQLVRSGYGDDICVGN--SLVDMYLKNQKLEEGFKAFDEIPHK-DVCSWTQMADGC 235

Query: 628 V 628
           +
Sbjct: 236 L 236


>Medtr5g024360.1 | PPR containing plant-like protein | HC |
           chr5:9808546-9804666 | 20130731
          Length = 611

 Score =  328 bits (841), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 186/505 (36%), Positives = 285/505 (56%), Gaps = 9/505 (1%)

Query: 197 DAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
           + A  +F  I   ++  +  M+  YA++     SL L+ QM   GY P+++T    LK+C
Sbjct: 58  NYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKAC 117

Query: 257 LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWS 316
             +     GK VH C LK+ ++ ++YV T LL +Y +  ++      F+++PK +V+ W+
Sbjct: 118 SFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWT 177

Query: 317 LMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV 376
            +I  Y  +D+ +EALE+F  M +  V  N  T  + L ACA    +  G+ +H  V K 
Sbjct: 178 CLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKA 237

Query: 377 GLDSNVFVSN-------ALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDG 429
           G D  VF SN       A++++YAKCG +  +  LF + PE+N V WN MI  Y Q    
Sbjct: 238 GYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERY 297

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANAL 489
            +A+ LF  M+ N   P + TF SVL  CA    L  G  VH+  +K+    DIA+A AL
Sbjct: 298 NEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATAL 357

Query: 490 IDMYAKCGRINDARLTFD-KMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ-TNCKP 547
           +DMYAK G +  A+  F+  ++K++ V W +MI   ++HG   EAL+LF  MQ+ ++  P
Sbjct: 358 LDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVP 417

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKL 607
           + +T++GVL ACS+ GL+++ Q  F  M++ Y I P  EHY+CMV LL R G F EA KL
Sbjct: 418 DHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKL 477

Query: 608 IGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRW 667
           +  +  +P++ +W ALL  C + +NI +       + E++P   G + LLSN+YA + +W
Sbjct: 478 METMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKW 537

Query: 668 DNVASVRKNMKRKGVKKEPGLSWVE 692
           + V   RK MK K + K  G S VE
Sbjct: 538 EEVNRTRKMMKHKRIAKTIGHSSVE 562



 Score =  186 bits (472), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 228/469 (48%), Gaps = 53/469 (11%)

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP--- 161
           +PL+  I F      C  SH FD   +    LF++ H  N ++  ++IK     + P   
Sbjct: 39  IPLSKLIDF------CVDSH-FDEYFNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMS 91

Query: 162 ---------------HVCWT-----------------IHACVYKRGHQADAFVGTSLIDA 189
                          H  +                  +H+C+ K G +A+ +V T L++ 
Sbjct: 92  LHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNM 151

Query: 190 YSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTI 249
           Y  C N+++  +VFD I   ++V+WT ++  Y  N    E+L++F +M   G   N  T+
Sbjct: 152 YVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTM 211

Query: 250 TAALKSCLGLEAFGVGKSVHGCALKACYD-------QDLYVGTELLELYAKSGDIVDAQL 302
             AL +C        G+ VH    KA YD        ++ + T ++E+YAK G +  A+ 
Sbjct: 212 VNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARE 271

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
            F +MP+++++ W+ MI  Y Q +R  EAL LF  M  +   P+  TF SVL  CA + +
Sbjct: 272 LFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCV 331

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVT-WNTMIV 421
           L LG+ +H+ +LK  +  ++ ++ AL+D+YAK GE+ ++  +F  S E+ +V  W +MI 
Sbjct: 332 LALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMIN 391

Query: 422 GYVQLGDGEKAMNLFSSMI-GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR-Y 479
                G G +A++LF  M   + + P  +T+  VL AC+    ++   +  +L  K+   
Sbjct: 392 ALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGI 451

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
             +    + ++D+ ++ G   +A    + M  R  ++ W A++ G  +H
Sbjct: 452 LPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIH 500



 Score =  149 bits (377), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 179/376 (47%), Gaps = 32/376 (8%)

Query: 11  YGAPLYRTIRPXXXXXXXXXXXXXXXXXQPPLDSHSYAALLQQAIQNRHPN--------- 61
           Y   L+R I                    P +  H Y  +LQ      H           
Sbjct: 59  YANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACS 118

Query: 62  ------AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVT 115
                 +GK +H  ILK G   +++    LLN YV+   ++   K+FD++P  N +++  
Sbjct: 119 FIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTC 178

Query: 116 LAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS----MDLPHVCWTIHACV 171
           L  G   + Q   AL V   + + G E N     T++  L++     D+    W +H  V
Sbjct: 179 LINGYVINDQPREALEVFKEMGRWGVEANE---VTMVNALIACARCRDVDTGRW-VHERV 234

Query: 172 YKRGH-------QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
            K G+        ++  + T++++ Y+ CG ++ AR++F+ +  +++V+W  M+  Y + 
Sbjct: 235 CKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQY 294

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
             Y E+L LF  M   G+ P+  T  + L  C       +G++VH   LK+   +D+ + 
Sbjct: 295 ERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALA 354

Query: 285 TELLELYAKSGDIVDAQ-LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ-SS 342
           T LL++YAK+G++  AQ +F   + KKDV+ W+ MI   A      EAL LF  M++ SS
Sbjct: 355 TALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSS 414

Query: 343 VVPNNFTFASVLQACA 358
           +VP++ T+  VL AC+
Sbjct: 415 LVPDHITYIGVLFACS 430


>Medtr2g009760.1 | PPR containing plant-like protein | HC |
           chr2:2078277-2080236 | 20130731
          Length = 622

 Score =  325 bits (834), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 174/576 (30%), Positives = 309/576 (53%), Gaps = 10/576 (1%)

Query: 126 FDHALHVILRLFKEGHEVN--PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
           +   L    +L    H  N  PFV  ++IK             +H   +  G   D  V 
Sbjct: 45  YHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVS 104

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
            S+I  Y+   ++++ARQVFD +  +D ++W  M+  Y +N    E+LQ+      +G+ 
Sbjct: 105 NSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFL 164

Query: 244 PNNYTITAALKSCLGLE---AFGVGKSVHGCAL---KACYDQDLYVGTELLELYAKSGDI 297
           P    + + +  C G E    + +G+ +HG  +   +      +++ T  ++ Y + GD 
Sbjct: 165 PKPELLASMVSMC-GREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDS 223

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
           + A+  F+EM  K+ + W+ +I+  A +     AL  +  M+   V PN  T  ++L AC
Sbjct: 224 LMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAAC 283

Query: 358 AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE-IENSMILFMESPEQNEVTW 416
           A    +  GK+IH    + G DS    S AL+ +Y +CG+ +  +  +F  S  ++ V W
Sbjct: 284 ARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLW 343

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
           +++I  Y + G+ +KA+ LF+ M   + +P  VT  +V+ AC   ++   G  +H   +K
Sbjct: 344 SSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILK 403

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
                 I V NALI+MYAKCG ++D+R  F +M  R+ V+WN+MI  Y +HG   +AL  
Sbjct: 404 FGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQH 463

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLG 596
           F +M++   K + +TF+ VLSAC++AGL+ +GQ LF+ ++ D  I   IEHY C++ L G
Sbjct: 464 FYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHG 523

Query: 597 RLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVL 656
           R GK ++A++++  +P +PS  +W +L+ +C +   +D+    +  ++  +P++  ++ L
Sbjct: 524 RSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTL 583

Query: 657 LSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           LS ++A   RW ++  VR+ MK + ++K  G S +E
Sbjct: 584 LSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619



 Score =  222 bits (566), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 248/503 (49%), Gaps = 10/503 (1%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G QLHC     G+  D    N +++ Y +F  ++ A ++FD MP  +TI++ ++     +
Sbjct: 85  GTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQ 144

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLL-VSMDLP-HVCWTIHACVYKRGH---Q 177
           +     AL ++   +  G    P +  +++ +    MDL   +   IH  V   G    Q
Sbjct: 145 NGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQ 204

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
              F+ T+ +D Y  CG+   AR VFD +  K+ VSWT ++   A N  Y+ +L  + +M
Sbjct: 205 HSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREM 264

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
           +V G  PN  T+ A L +C        GK +HG A +  +D        L+ LY + G  
Sbjct: 265 QVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQS 324

Query: 298 VD-AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
           +  A+  FE    +DV+ WS +I  YA+   S +AL+LF+ MR     PN  T  +V+ A
Sbjct: 325 LHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISA 384

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
           C        G  IH  +LK G+  ++FV NAL+++YAKCG +++S  +F+E P ++ VTW
Sbjct: 385 CTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTW 444

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTI 475
           N+MI  Y   G GE+A+  F  M    ++   VTF +VL AC     +  G Q+   +  
Sbjct: 445 NSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNA 504

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMHGLSTEAL 534
                  I     LID++ + G++ DA      M  +     W++++    +HG    A 
Sbjct: 505 DCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAE 564

Query: 535 NLFNKMQQTNCKPNKLTFVGVLS 557
           +L +++ ++  +PN      +LS
Sbjct: 565 SLSSQLIRS--EPNNAASYTLLS 585


>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:9142979-9147043 | 20130731
          Length = 878

 Score =  324 bits (831), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 199/666 (29%), Positives = 337/666 (50%), Gaps = 67/666 (10%)

Query: 77  LDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL 136
           LD    N ++  Y +    DDA K+F++MP+ + +S+ ++  G +++ +   A+    + 
Sbjct: 140 LDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAM----KF 195

Query: 137 FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNV 196
           F+   E N      ++   V+       W +    +++    +A    +++  ++  G +
Sbjct: 196 FERMAERNVVSWNLMVAGFVNNCDLGSAWEL----FEKIPDPNAVSWVTMLCGFARHGKI 251

Query: 197 DAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
             AR++FD + CK++VSW  M+  Y ++   +E+++LF +                 K C
Sbjct: 252 VEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKE--------------TPYKDC 297

Query: 257 LGLEAFGVGKSVHGCALKA--CYDQ----DLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
           +       G    G   +A   Y+Q    D+   T L+    ++G I +A   F ++ K+
Sbjct: 298 VSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKR 357

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
           D I W+ MIA Y QS R  EAL LF   RQ  V                           
Sbjct: 358 DAICWNSMIAGYCQSGRMSEALNLF---RQMPV--------------------------- 387

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGE 430
                     N    N ++  YA+ GE++ +  +F     +N ++WN++I G++Q G   
Sbjct: 388 ---------KNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYL 438

Query: 431 KAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALI 490
            A+     M     +P + TF+  L +CA  AAL  G Q+H L +K+ Y ND+ V+NALI
Sbjct: 439 DALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALI 498

Query: 491 DMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKL 550
            MYAKCG +  A   F  ++  + +SWN++I GY+++G + EA   F +M      P+++
Sbjct: 499 AMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEV 558

Query: 551 TFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGE 610
           TF+G+LSACS+AGL ++G  LFK M + + IEP  EHY+C+V LLGR+G+ +EA  ++  
Sbjct: 559 TFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRG 618

Query: 611 IPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNV 670
           +  + +  +W +LL AC V KN++LG+  A  +LE++PH+   ++ LSNM+A A RW++V
Sbjct: 619 MKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDV 678

Query: 671 ASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYV 730
             +R  M+ +   K PG SW+E Q  +  F   D      + I  +L  L+   RD   +
Sbjct: 679 ERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMRDKCNI 738

Query: 731 PDCNAV 736
            D  +V
Sbjct: 739 SDMKSV 744



 Score =  151 bits (381), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 224/467 (47%), Gaps = 41/467 (8%)

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           S++  ++  G V  ARQ+FD +  +++VSW  M+  Y  N   EE+ +LF    +M  R 
Sbjct: 53  SMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLF---DLMAERD 109

Query: 245 N---NYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
           N      IT   +  +  +A  + + V      AC++        ++  YAK G   DA+
Sbjct: 110 NFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNA-------MIAGYAKKGRFDDAE 162

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             FE+MP KD++ ++ M+A Y Q+ +   A++ F  M + +VV  N   A  +  C    
Sbjct: 163 KVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGS 222

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
              L ++I         D N      ++  +A+ G+I  +  LF   P +N V+WN MI 
Sbjct: 223 AWELFEKIP--------DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIA 274

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
            YVQ    ++A+ LF      D     V++++++        LD   +V++   +  Y  
Sbjct: 275 AYVQDLQIDEAVKLFKETPYKDC----VSWTTMINGYVRVGKLDEAREVYN---QMPY-K 326

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           D+A   AL+    + GRI++A   F +++KR+ + WN+MI GY   G  +EALNLF +M 
Sbjct: 327 DVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMP 386

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKF 601
             N     +++  ++S  + AG +D+   +F++M     +   I   + + G L   G +
Sbjct: 387 VKNA----VSWNTMISGYAQAGEMDRATEIFEAMG----VRNVISWNSLITGFLQN-GLY 437

Query: 602 DEAVK---LIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLE 645
            +A+K   L+G+   +P    +   L +C     + +G+   + +L+
Sbjct: 438 LDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILK 484



 Score =  149 bits (377), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 219/466 (46%), Gaps = 25/466 (5%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQ-LHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
           P  D  SY ++L    QN     GK  L     +R A  ++ + N+++  +V    L  A
Sbjct: 169 PVKDLVSYNSMLAGYTQN-----GKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSA 223

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVS 157
            +LF+++P  N +S+VT+  G +R  +   A  +  R+  K     N  +   +  L + 
Sbjct: 224 WELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQID 283

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
             +          ++K     D    T++I+ Y   G +D AR+V++ +  KD+ + T +
Sbjct: 284 EAVK---------LFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTAL 334

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           +    +N   +E+ Q+F Q+        N  I    +S    EA  +         +   
Sbjct: 335 MSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNL--------FRQMP 386

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
            ++      ++  YA++G++  A   FE M  ++VI W+ +I  + Q+    +AL+    
Sbjct: 387 VKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVL 446

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M Q    P+  TFA  L +CA    L +GKQ+H  +LK G  +++FVSNAL+ +YAKCG 
Sbjct: 447 MGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGG 506

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           ++++  +F +    + ++WN++I GY   G   +A   F  M      P EVTF  +L A
Sbjct: 507 VQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSA 566

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAV-ANALIDMYAKCGRINDA 502
           C+     + G+ +    I+      +A   + L+D+  + GR+ +A
Sbjct: 567 CSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEA 612



 Score =  103 bits (256), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 26/324 (8%)

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
            K++ SNV+      N    N+++ V+AK G + ++  LF +  ++N V+WNTMI GY+ 
Sbjct: 36  AKRVFSNVIH----KNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLH 91

Query: 426 LGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAV 485
               E+A  LF  M   D     +  +   R       L+   ++  L        D A 
Sbjct: 92  NNMVEEAHKLFDLMAERDNFSWALMITCYTRK----GMLEKARELFELVPDKL---DTAC 144

Query: 486 ANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC 545
            NA+I  YAK GR +DA   F+KM  ++ VS+N+M+ GY+ +G    A+  F +M + N 
Sbjct: 145 WNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNV 204

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAV 605
               L   G ++ C     L     LF+ +      +P    +  M+    R GK  EA 
Sbjct: 205 VSWNLMVAGFVNNCD----LGSAWELFEKIP-----DPNAVSWVTMLCGFARHGKIVEAR 255

Query: 606 KLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDD-GTHVLLSNMYAVA 664
           KL   +P + +V+ W A++ A V    ID     A  + +  P+ D  +   + N Y   
Sbjct: 256 KLFDRMPCK-NVVSWNAMIAAYVQDLQIDE----AVKLFKETPYKDCVSWTTMINGYVRV 310

Query: 665 KRWDNVASVRKNMKRKGVKKEPGL 688
            + D    V   M  K V  +  L
Sbjct: 311 GKLDEAREVYNQMPYKDVAAKTAL 334


>Medtr4g074150.2 | PPR containing plant-like protein | HC |
           chr4:28198214-28202779 | 20130731
          Length = 606

 Score =  323 bits (828), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 178/500 (35%), Positives = 286/500 (57%), Gaps = 7/500 (1%)

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALK--SCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           F + +L  + +M  MG +P+ +T    LK  S  G+    +   V+    K  +D D +V
Sbjct: 84  FPKTTLLSYAKMHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFV 143

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
               +  +  SG + +A   F+E P++D++ W+ +I  + ++    EAL  F  MR   V
Sbjct: 144 CNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGV 203

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG---LDSNVFVSNALMDVYAKCGEIEN 400
           V + FT ASVL+A A       GK++H   ++ G   LD +V+   AL+D+Y KCG  E+
Sbjct: 204 VIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYC--ALVDMYFKCGYCED 261

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F E P ++ V W  ++ G+VQ    + A++ F  M+ +++ P E T +SVL ACA 
Sbjct: 262 ACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAH 321

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
             ALD G  VH        N +  +  +L+DMYAKCG ++ A + F+ +  +   +W AM
Sbjct: 322 VGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAM 381

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           I G ++HG +  ALN+F++M ++  +PN +TF+GVL ACS+ G +D+G+ LF+ M   Y+
Sbjct: 382 INGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYH 441

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           ++P +EHY CMV LLGR G  ++A ++I  +P +PS  V  ALLGACV  K+  +G    
Sbjct: 442 LKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALLGACVSHKDFVMGEHIG 501

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYF 700
             ++ ++ + +  + LL+N+Y+  + W+ VA VRK MK   V+K PG SW+E  G +H F
Sbjct: 502 NILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPGYSWIEVAGSMHEF 561

Query: 701 SVGDTSHPDNKLICAMLEWL 720
              D SH +   +  MLE L
Sbjct: 562 KAFDHSHSEFSCVYLMLENL 581



 Score =  187 bits (476), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 211/418 (50%), Gaps = 24/418 (5%)

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
           +KL    P T  +S+  + +   +  +  H   ++L++F +    N              
Sbjct: 78  NKLITSFPKTTLLSYAKMHEMGVQPDK--HTFPLLLKIFSKNGVPND------------- 122

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
              H+ + ++A V+K G   D FV    I A+   G +  A +VFD    +D+V+WT ++
Sbjct: 123 ---HLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL---KA 275
             + +N    E+L+ F +MR+ G   + +T+ + L++   +  +  GK VHG  +   + 
Sbjct: 180 NGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
             D  +Y    L+++Y K G   DA   F+EMP +DV+ W++++A + Q  + ++AL  F
Sbjct: 240 VLDGSVYCA--LVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFF 297

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
             M   +VVPN FT  SVL ACA    L  G+ +H  +     + N  +  +L+D+YAKC
Sbjct: 298 RRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKC 357

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G ++ ++++F     +N  TW  MI G    GD   A+N+FS M+ + ++P +VTF  VL
Sbjct: 358 GCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVL 417

Query: 456 RACAGFAALDPGLQVHSLTIKTRY-NNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
            AC+    +D G ++  +   T +   ++     ++D+  + G + DA+   D M  +
Sbjct: 418 GACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK 475



 Score =  122 bits (306), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 203/465 (43%), Gaps = 47/465 (10%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPN--AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-- 94
           QP  D H++  LL+   +N  PN      ++  + K G   D F  N    F   F C  
Sbjct: 101 QP--DKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCN---GFISAFGCSG 155

Query: 95  -LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK 153
            + +A K+FDE P  + +++  L  G  ++     AL   + +  +G  ++ F   ++++
Sbjct: 156 FMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLR 215

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQA-DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMV 212
               +        +H    + G    D  V  +L+D Y  CG  + A +VFD +  +D+V
Sbjct: 216 AAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVV 275

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           +WT +V  + +   Y+++L  F +M +    PN +T+T+ L +C  + A   G+ VH   
Sbjct: 276 AWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYM 335

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
                + +  +GT L+++YAK G +  A + FE +  K+V  W+ MI   A    +  AL
Sbjct: 336 EHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGAL 395

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDV 391
            +F  M +S + PN+ TF  VL AC+    +  GK++   +     L  N+     ++D+
Sbjct: 396 NIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDL 455

Query: 392 YAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTF 451
             + G +E++  +    P                                  M+P+    
Sbjct: 456 LGRAGCLEDAKQIIDNMP----------------------------------MKPSPGVL 481

Query: 452 SSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
            ++L AC        G  + ++ +  + N++   A  L ++Y+ C
Sbjct: 482 GALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYA-LLANLYSTC 525


>Medtr4g074150.1 | PPR containing plant-like protein | HC |
           chr4:28198256-28202779 | 20130731
          Length = 606

 Score =  323 bits (828), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 178/500 (35%), Positives = 286/500 (57%), Gaps = 7/500 (1%)

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALK--SCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           F + +L  + +M  MG +P+ +T    LK  S  G+    +   V+    K  +D D +V
Sbjct: 84  FPKTTLLSYAKMHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFV 143

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
               +  +  SG + +A   F+E P++D++ W+ +I  + ++    EAL  F  MR   V
Sbjct: 144 CNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGV 203

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG---LDSNVFVSNALMDVYAKCGEIEN 400
           V + FT ASVL+A A       GK++H   ++ G   LD +V+   AL+D+Y KCG  E+
Sbjct: 204 VIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYC--ALVDMYFKCGYCED 261

Query: 401 SMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAG 460
           +  +F E P ++ V W  ++ G+VQ    + A++ F  M+ +++ P E T +SVL ACA 
Sbjct: 262 ACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAH 321

Query: 461 FAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
             ALD G  VH        N +  +  +L+DMYAKCG ++ A + F+ +  +   +W AM
Sbjct: 322 VGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAM 381

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           I G ++HG +  ALN+F++M ++  +PN +TF+GVL ACS+ G +D+G+ LF+ M   Y+
Sbjct: 382 INGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYH 441

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           ++P +EHY CMV LLGR G  ++A ++I  +P +PS  V  ALLGACV  K+  +G    
Sbjct: 442 LKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALLGACVSHKDFVMGEHIG 501

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYF 700
             ++ ++ + +  + LL+N+Y+  + W+ VA VRK MK   V+K PG SW+E  G +H F
Sbjct: 502 NILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPGYSWIEVAGSMHEF 561

Query: 701 SVGDTSHPDNKLICAMLEWL 720
              D SH +   +  MLE L
Sbjct: 562 KAFDHSHSEFSCVYLMLENL 581



 Score =  187 bits (476), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 211/418 (50%), Gaps = 24/418 (5%)

Query: 99  SKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM 158
           +KL    P T  +S+  + +   +  +  H   ++L++F +    N              
Sbjct: 78  NKLITSFPKTTLLSYAKMHEMGVQPDK--HTFPLLLKIFSKNGVPND------------- 122

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
              H+ + ++A V+K G   D FV    I A+   G +  A +VFD    +D+V+WT ++
Sbjct: 123 ---HLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL---KA 275
             + +N    E+L+ F +MR+ G   + +T+ + L++   +  +  GK VHG  +   + 
Sbjct: 180 NGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
             D  +Y    L+++Y K G   DA   F+EMP +DV+ W++++A + Q  + ++AL  F
Sbjct: 240 VLDGSVYCA--LVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFF 297

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
             M   +VVPN FT  SVL ACA    L  G+ +H  +     + N  +  +L+D+YAKC
Sbjct: 298 RRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKC 357

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G ++ ++++F     +N  TW  MI G    GD   A+N+FS M+ + ++P +VTF  VL
Sbjct: 358 GCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVL 417

Query: 456 RACAGFAALDPGLQVHSLTIKTRY-NNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
            AC+    +D G ++  +   T +   ++     ++D+  + G + DA+   D M  +
Sbjct: 418 GACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK 475



 Score =  122 bits (306), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 203/465 (43%), Gaps = 47/465 (10%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPN--AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-- 94
           QP  D H++  LL+   +N  PN      ++  + K G   D F  N    F   F C  
Sbjct: 101 QP--DKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCN---GFISAFGCSG 155

Query: 95  -LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK 153
            + +A K+FDE P  + +++  L  G  ++     AL   + +  +G  ++ F   ++++
Sbjct: 156 FMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLR 215

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQA-DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMV 212
               +        +H    + G    D  V  +L+D Y  CG  + A +VFD +  +D+V
Sbjct: 216 AAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVV 275

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           +WT +V  + +   Y+++L  F +M +    PN +T+T+ L +C  + A   G+ VH   
Sbjct: 276 AWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYM 335

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
                + +  +GT L+++YAK G +  A + FE +  K+V  W+ MI   A    +  AL
Sbjct: 336 EHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGAL 395

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDV 391
            +F  M +S + PN+ TF  VL AC+    +  GK++   +     L  N+     ++D+
Sbjct: 396 NIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDL 455

Query: 392 YAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTF 451
             + G +E++  +    P                                  M+P+    
Sbjct: 456 LGRAGCLEDAKQIIDNMP----------------------------------MKPSPGVL 481

Query: 452 SSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
            ++L AC        G  + ++ +  + N++   A  L ++Y+ C
Sbjct: 482 GALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYA-LLANLYSTC 525


>Medtr7g078360.1 | PPR containing plant-like protein | HC |
           chr7:29634869-29632890 | 20130731
          Length = 632

 Score =  322 bits (824), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 183/563 (32%), Positives = 304/563 (53%), Gaps = 78/563 (13%)

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
           A V K G+  D +V   ++  Y+  G ++ AR++FD +  + +  W  M+  Y +    E
Sbjct: 108 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 167

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           E+  LF    VMG +                                   +++   T ++
Sbjct: 168 EASTLF---HVMGDQE--------------------------------ISRNVITWTTMI 192

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM-RQSSVVPNN 347
             +AK G++  A+++F++MP++ V+ W+ M++ YAQ    +E + LF+ M    +V P+ 
Sbjct: 193 TGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDE 252

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIE------- 399
            T+A+V+ +C++     L + I   +  KVG   N FV  AL+D++AKCG +E       
Sbjct: 253 TTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFE 312

Query: 400 -------------NSMI--------------LFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
                        N+MI              LF + P+++ V+WN+MI GY Q G+  KA
Sbjct: 313 QLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKA 372

Query: 433 MNLFSSMIGND--MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALI 490
           + LF  MI ++   +P EVT  SV  AC     L  G    S+         I+V N+LI
Sbjct: 373 IKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLI 432

Query: 491 DMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKL 550
           +MY++CG + DA L F +M  R+ VS+N +I G++ HG   E++ L +KM++   +P+++
Sbjct: 433 NMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRI 492

Query: 551 TFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGE 610
           T++ +L+ACS+AGLLD+GQ LF+S+       P ++HY CM+ +LGR G+ +EA+KLI  
Sbjct: 493 TYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQS 547

Query: 611 IPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNV 670
           +P +P   ++ +LL A  + K ++LG   A  + +++PH+ G + LLSN+YA A RW   
Sbjct: 548 MPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEG 607

Query: 671 ASVRKNMKRKGVKKEPGLSWVEN 693
             VR  M+++GVKK  GLSW+E+
Sbjct: 608 DKVRDTMRKQGVKKTTGLSWLEH 630



 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 165/354 (46%), Gaps = 51/354 (14%)

Query: 304 FEEMPKKDVIPWSLMIARYAQ-SDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAAQV 361
           F      DV  ++ M+  Y+Q    S+  + LF H ++   + PN   ++ ++++  ++ 
Sbjct: 44  FHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSES 103

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
           +L L     ++VLK G D + +V N ++ +YAK G IE +  LF E P++    WN MI 
Sbjct: 104 MLFL-----AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMIS 158

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
           GY + G+ E+A  LF  M   ++    +T+++                            
Sbjct: 159 GYWKCGNEEEASTLFHVMGDQEISRNVITWTT---------------------------- 190

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM- 540
                  +I  +AK G +  AR+ FDKM +R  VSWNAM+ GY+  G   E + LFN M 
Sbjct: 191 -------MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 243

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
              N +P++ T+  V+S+CS+ G     +S+ + +       P     T ++ +  + G 
Sbjct: 244 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN 303

Query: 601 FDEAVKL---IGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDD 651
            + A K+   +G   ++ SV  W A++ A     ++      A+H+ +  P  D
Sbjct: 304 LEAAHKIFEQLGVYKYRSSV-PWNAMISAYARVGDLP----SAKHLFDKMPQRD 352



 Score =  104 bits (259), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 164/355 (46%), Gaps = 46/355 (12%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCT--TII 152
           L  A   FD+MP  + +S+  +  G ++    +  + +   +   G+ V P   T  T+I
Sbjct: 201 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN-VQPDETTWATVI 259

Query: 153 KLLVSMDLPHVCWTI-HACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD--GIF-- 207
               S+  P +  +I      K G + + FV T+L+D ++ CGN++AA ++F+  G++  
Sbjct: 260 SSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 319

Query: 208 ------------------------------CKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
                                          +D VSW  M+  Y +N    ++++LF +M
Sbjct: 320 RSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEM 379

Query: 238 RVM--GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ-DLYVGTELLELYAKS 294
                  +P+  T+ +   +C  L   G+G       LK  + Q  + V   L+ +Y++ 
Sbjct: 380 ISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSI-LKVNHIQISISVYNSLINMYSRC 438

Query: 295 GDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
           G + DA L F+EM  +D++ ++ +I+ +A+     E++EL   M++  + P+  T+ ++L
Sbjct: 439 GSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAIL 498

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
            AC+   LL  G+++  ++    +D        ++D+  + G +E +M L    P
Sbjct: 499 TACSHAGLLDEGQRLFESIKFPDVDHYA----CMIDMLGRAGRLEEAMKLIQSMP 549



 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 132/315 (41%), Gaps = 52/315 (16%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE 142
           N +++ Y +   L  A  LFD+MP  +T+S+ ++  G +++ +   A+ +   +      
Sbjct: 326 NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDS 385

Query: 143 VNPFVCTTIIKLLVSMDLPHVC---WTIHACVYKRGH-QADAFVGTSLIDAYSVCGNVDA 198
             P   T +        L  +    W +   + K  H Q    V  SLI+ YS CG++  
Sbjct: 386 RKPDEVTMVSVFSACGHLGELGLGNWAV--SILKVNHIQISISVYNSLINMYSRCGSMQD 443

Query: 199 ARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLG 258
           A  +F  +  +D+VS+  ++  +AE+    ES++L  +M+  G  P+  T  A L +C  
Sbjct: 444 AVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTAC-- 501

Query: 259 LEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLM 318
                                            + +G + + Q  FE +   DV  ++ M
Sbjct: 502 ---------------------------------SHAGLLDEGQRLFESIKFPDVDHYACM 528

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-- 376
           I    ++ R +EA++L   M    + P+   + S+L A +    + LG+   + + KV  
Sbjct: 529 IDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEP 585

Query: 377 ------GLDSNVFVS 385
                  L SN++ S
Sbjct: 586 HNSGNYALLSNIYAS 600


>Medtr4g011730.1 | PPR containing plant-like protein | HC |
           chr4:2939745-2937455 | 20130731
          Length = 706

 Score =  320 bits (821), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 200/644 (31%), Positives = 322/644 (50%), Gaps = 83/644 (12%)

Query: 160 LPHVCWT------IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDM-- 211
           L H C+T      IH  +        +F+   LI  YS   ++  AR++F     + +  
Sbjct: 32  LHHQCFTLQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSN 91

Query: 212 VSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGC 271
           + W  ++     + +Y  +++++ QM   G+ P+ +T+   +KSC  + + G+ K VH  
Sbjct: 92  LVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCH 151

Query: 272 ALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYA-------- 323
            L+  +   ++V  EL+ +Y K   + DA   F+ M  + V+ W+ +++ YA        
Sbjct: 152 VLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGA 211

Query: 324 ----------------------QSDRSK-----EALELFHCMRQSSVVPNNFTFASVLQA 356
                                  S  ++     E +ELF  MR   +  +    A VL  
Sbjct: 212 FRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSV 271

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE-----------IENSMIL- 404
           CA    +  GK+IH  V+K G +  +FV NAL+ +Y K  E           I+N  ++ 
Sbjct: 272 CADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVS 331

Query: 405 --------------------FME-------SP-EQNEVTWNTMIVGYVQLGDGEKAMNLF 436
                               F++       SP   N ++W+ +I G+   G  EK++ LF
Sbjct: 332 WNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELF 391

Query: 437 SSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
             M    +    VT SSVL  CA  AAL+ G ++H+  I+   +++I V N L++MY KC
Sbjct: 392 RQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVGNGLVNMYMKC 451

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
           G   +A L FD +  R+ +SWN++I GY MHGL   A+  F++M     +P+K+TFV VL
Sbjct: 452 GVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVL 511

Query: 557 SACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPS 616
           SACS+AGL+  G++LF  M  +++IEP +EHY CMV LLGR G   EA  ++  +P +P+
Sbjct: 512 SACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLGRAGLLQEAHDIVRNMPIEPN 571

Query: 617 VMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKN 676
             VW ALL +C + ++ DL       +L +K    G+ +LLSN+YA + + ++ A VR +
Sbjct: 572 ECVWGALLNSCRMYRDTDLIEEIESRILALKSEITGSFMLLSNIYADSGKREDSARVRVS 631

Query: 677 MKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWL 720
            K KG KK PG SW+E +  V+ FS G+  H +   I A+L  L
Sbjct: 632 AKEKGFKKIPGQSWIEVRKKVYTFSAGNVVHLEQDEIFAILNEL 675



 Score =  173 bits (438), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 235/539 (43%), Gaps = 81/539 (15%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFV--TLAQGC 120
            +Q+H  ++        F    L+  Y +F+ + +A K+F   P  +  + V  ++ +  
Sbjct: 42  ARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSIIRAN 101

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
                +++A+ +  ++ K G   + F    IIK    +    +C  +H  V + G +   
Sbjct: 102 VSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHV 161

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
            V   L+  Y     ++ A +VFDG+  + ++SW  +V  YA N  Y  + ++F +M + 
Sbjct: 162 HVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELE 221

Query: 241 GYRPNNYTITAALKS-----------------------------------CLGLEAFGVG 265
           G  PN  T T+ L S                                   C  ++    G
Sbjct: 222 GLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRG 281

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKS-GDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           K +HG  +K  Y+  L+V   L+ +Y K   D+ DA   F ++  K ++ W+ +I+ YA 
Sbjct: 282 KEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYAD 341

Query: 325 S---------------------------------------DRSKEALELFHCMRQSSVVP 345
           S                                        R +++LELF  M+ + V+ 
Sbjct: 342 SGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVMA 401

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
           N  T +SVL  CA    L LG+++H+  ++  +D N+ V N L+++Y KCG  E + ++F
Sbjct: 402 NCVTISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVF 461

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
                ++ ++WN++I GY   G GE A+  F  MI   ++P ++TF +VL AC+    + 
Sbjct: 462 DNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVA 521

Query: 466 PGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMI 521
            G  +    + T ++ +  V +   ++D+  + G + +A      M  +  E  W A++
Sbjct: 522 AGRNLFDRMV-TEFSIEPTVEHYACMVDLLGRAGLLQEAHDIVRNMPIEPNECVWGALL 579


>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
           chr7:19429810-19428206 | 20130731
          Length = 534

 Score =  320 bits (819), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 179/571 (31%), Positives = 302/571 (52%), Gaps = 42/571 (7%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCG--NVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
           ++K     D F+    I A S     N++ A   F  I   + + +  ++     +    
Sbjct: 1   MFKTNFNQDCFLMNQFITASSSFSSFNINFAISTFTQITKPNTLVYNALIKACVHSHSSN 60

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           ++L  +  M      P++Y+ ++ +K+C  L     GK++HG   K  +D  ++V T L+
Sbjct: 61  QALLHYIHMLRSSVIPSSYSFSSLIKACTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLV 120

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNF 348
           E Y+  G + DA+  F+EM  +DV  W+ MI+ Y +++  + A  LF  M +        
Sbjct: 121 EFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEMPE-------- 172

Query: 349 TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
                            GK             N    NA++D YAK G IE     F E 
Sbjct: 173 -----------------GK-------------NTATWNAVIDGYAKLGNIERVEFFFKEI 202

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRACAGFAALDPG 467
           P ++ ++W T++  Y++     + + LF  M+    + P EV  ++V+ ACA   AL  G
Sbjct: 203 PSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFG 262

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
            +VH   + + +  D+ + ++LIDMYAKCG +  + L F K+ ++    WN+MI G + H
Sbjct: 263 KEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAH 322

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           G + EAL +F +M++   +PN++TFV VL+AC++AG + +G+  F SM +DY I P +EH
Sbjct: 323 GYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEH 382

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMK 647
           Y CMV LL + G  ++A+++I  + F+P+  +W ALL  C V +N+++ R   ++++ ++
Sbjct: 383 YGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHRNLEIARVTVRNLMILE 442

Query: 648 PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKE-PGLSWVENQGVVHYFSVGDTS 706
           P + G + LL NMYA   RW +VA +R  MK  GV+K  PG SW+E    +H F+  D  
Sbjct: 443 PSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSSWIEINKEIHVFAASDKC 502

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVPDCNAVL 737
           HP    +  +L  L+++ R AG+VP+  +VL
Sbjct: 503 HPSYGQVHLLLVELDEQLRLAGFVPEMGSVL 533



 Score =  179 bits (454), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 41/436 (9%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL 154
           ++ A   F ++   NT+ +  L + C  SH  + AL   + + +     + +  +++IK 
Sbjct: 28  INFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKA 87

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
              +       T+H  V+K G  +  FV T+L++ YS  G V  AR+VFD +  +D+ +W
Sbjct: 88  CTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAW 147

Query: 215 TGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
           T M+  Y  N   E +  LF +M      P                    GK+       
Sbjct: 148 TTMISAYVRNNDVESAEILFVEM------PE-------------------GKNT------ 176

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
           A ++        +++ YAK G+I   + FF+E+P KD+I W+ +++ Y ++ R  E ++L
Sbjct: 177 ATWNA-------VIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKL 229

Query: 335 FHCM-RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           FH M  +  VVP+     +V+ ACA    L  GK++H  ++  G   +V++ ++L+D+YA
Sbjct: 230 FHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYA 289

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           KCG +E S+++F +  E+N   WN+MI G    G  ++A+ +F+ M    ++P  VTF S
Sbjct: 290 KCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVS 349

Query: 454 VLRACAGFAALDPGLQVHSLTIKTR-YNNDIAVANALIDMYAKCGRINDARLTFDKMD-K 511
           VL AC     +  G +  +  I+    +  +     ++D+ +K G + DA      M  +
Sbjct: 350 VLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFE 409

Query: 512 REEVSWNAMICGYSMH 527
                W A++ G  +H
Sbjct: 410 PNSFIWGALLNGCKVH 425



 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 134/318 (42%), Gaps = 45/318 (14%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE 142
           N +++ Y +   ++     F E+P  + IS+ TL     ++ ++   + +   +  EG  
Sbjct: 180 NAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKV 239

Query: 143 V-NPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQ 201
           V +    TT+I     +        +H  +   G   D ++G+SLID Y+ CG+++ +  
Sbjct: 240 VPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLL 299

Query: 202 VFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEA 261
           VF  +  K++  W  M+   A + + +E+L++F +M   G RPN  T  + L +C     
Sbjct: 300 VFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTAC----- 354

Query: 262 FGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP-----WS 316
                                           +G I + + FF  M +   I      + 
Sbjct: 355 ------------------------------THAGFIQEGRRFFTSMIEDYCISPQVEHYG 384

Query: 317 LMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV 376
            M+   ++    ++ALE+   MR     PN+F + ++L  C     L + +    N++ +
Sbjct: 385 CMVDLLSKGGLLEDALEMIRGMRFE---PNSFIWGALLNGCKVHRNLEIARVTVRNLMIL 441

Query: 377 GLDSNVFVSNALMDVYAK 394
              SN    + L+++YA+
Sbjct: 442 E-PSNSGHYSLLVNMYAE 458


>Medtr7g078420.1 | PPR containing plant-like protein | HC |
           chr7:29654282-29650656 | 20130731
          Length = 646

 Score =  319 bits (818), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 182/562 (32%), Positives = 302/562 (53%), Gaps = 77/562 (13%)

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
           A V K G+  D +V   ++  Y+  G ++ AR++FD +  + +  W  M+  Y +    E
Sbjct: 123 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 182

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           E+  LF    VMG +                                   +++   T ++
Sbjct: 183 EASTLF---HVMGDQE--------------------------------ISRNVITWTTMI 207

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM-RQSSVVPNN 347
             +AK G++  A+++F++MP++ V+ W+ M++ YAQ    +E + LF+ M    +V P+ 
Sbjct: 208 TGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDE 267

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIE------- 399
            T+ +V+ +C++     L + I   +   VG   N FV  AL+D++AKCG +E       
Sbjct: 268 TTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFE 327

Query: 400 -------------NSMI--------------LFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
                        N+MI              LF + P+++ V+WN+MI GY Q G+  KA
Sbjct: 328 QLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKA 387

Query: 433 MNLFSSMIGN-DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALID 491
           + LF  MI + D +P EVT  SV  AC     L  G    S+  +      I+V N+LI 
Sbjct: 388 IKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLIS 447

Query: 492 MYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLT 551
           MY++CG + DA L F +M  R+ VS+N +I G++ HG   E++ L  KM++   +P+++T
Sbjct: 448 MYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRIT 507

Query: 552 FVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEI 611
           ++ +L+ACS+AGLL +GQ LF+S+       P ++HY CM+ +LGR G+ +EA+KLI  +
Sbjct: 508 YIAILTACSHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSM 562

Query: 612 PFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVA 671
           P +P   ++ +LL A  + K ++LG   A  + +++PH+ G +VLLSN+YA A RW +  
Sbjct: 563 PMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGD 622

Query: 672 SVRKNMKRKGVKKEPGLSWVEN 693
            VR  M+++GVKK  GLSW+E+
Sbjct: 623 KVRDTMRKQGVKKTTGLSWLEH 644



 Score =  135 bits (340), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 168/355 (47%), Gaps = 51/355 (14%)

Query: 303 FFEEMPKKDVIPWSLMIARYAQ-SDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAAQ 360
            F      DV  ++ M+  Y+Q   R++  + LF H +R  ++ PN   ++ ++++  ++
Sbjct: 58  IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSE 117

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
            +L L     ++VLK G D + +V N ++ +YAK G IE +  LF E P++    WN MI
Sbjct: 118 SMLFL-----AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
            GY + G+ E+A  LF  M   ++    +T+++                           
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTT--------------------------- 205

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
                   +I  +AK G +  AR+ FDKM +R  VSWNAM+ GY+  G   E + LFN M
Sbjct: 206 --------MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDM 257

Query: 541 -QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
               N +P++ T+V V+S+CS+ G     +S+ + +       P     T ++ +  + G
Sbjct: 258 LSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCG 317

Query: 600 KFDEAVKL---IGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDD 651
             + A K+   +G   ++ SV  W A++ A     ++      A+H+ +  P  D
Sbjct: 318 NLEAAHKIFEQLGVYKYRSSV-PWNAMISAYARVGDLP----SARHLFDKMPQRD 367



 Score =  104 bits (259), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 158/353 (44%), Gaps = 43/353 (12%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCT--TII 152
           L  A   FD+MP  + +S+  +  G ++    +  + +   +   G+ V P   T  T+I
Sbjct: 216 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN-VQPDETTWVTVI 274

Query: 153 KLLVSMDLPHVCWTI-HACVYKRGHQADAFVGTSLIDAYSVCGNVDA------------- 198
               S+  P +  +I        G + + FV T+L+D ++ CGN++A             
Sbjct: 275 SSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 334

Query: 199 ---------------------ARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
                                AR +FD +  +D VSW  M+  Y +N    ++++LF +M
Sbjct: 335 RSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEM 394

Query: 238 -RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
                 +P+  T+ +   +C  L   G+G        +      + V   L+ +Y++ G 
Sbjct: 395 ISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGS 454

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
           + DA L F+EM  +D++ ++ +I+ +A+     E++EL   M++  + P+  T+ ++L A
Sbjct: 455 MQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTA 514

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           C+   LL  G+++  ++    +D        ++D+  + G +E +M L    P
Sbjct: 515 CSHAGLLGEGQRLFESIKFPDVDHYA----CMIDMLGRAGRLEEAMKLIQSMP 563



 Score = 74.3 bits (181), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 54/323 (16%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKE--- 139
           N +++ Y +   L  A  LFD+MP  +T+S+ ++  G +++ +   A+    +LF+E   
Sbjct: 341 NAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAI----KLFEEMIS 396

Query: 140 GHEVNPFVCTTIIKLLVSMDLPHVC---WTIHACVYKRGH-QADAFVGTSLIDAYSVCGN 195
             +  P   T +        L  +    W +   + K  H Q    V  SLI  YS CG+
Sbjct: 397 SEDSKPDEVTMVSVFSACGHLGELGLGNWAV--SILKENHIQISISVYNSLISMYSRCGS 454

Query: 196 VDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
           +  A  +F  +  +D+VS+  ++  +AE+    ES++L  +M+  G  P+  T  A L +
Sbjct: 455 MQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTA 514

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
           C                                   + +G + + Q  FE +   DV  +
Sbjct: 515 C-----------------------------------SHAGLLGEGQRLFESIKFPDVDHY 539

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           + MI    ++ R +EA++L   M    + P+   + S+L A +    + LG+   + + K
Sbjct: 540 ACMIDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNATSIHKQVELGELAAAKLFK 596

Query: 376 VGL-DSNVFVSNALMDVYAKCGE 397
           V   +S  +V   L ++YA  G 
Sbjct: 597 VEPHNSGNYV--LLSNIYASAGR 617


>Medtr8g075460.1 | PPR containing plant-like protein | HC |
           chr8:31911388-31913406 | 20130731
          Length = 672

 Score =  318 bits (814), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 200/704 (28%), Positives = 339/704 (48%), Gaps = 109/704 (15%)

Query: 58  RHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTL 116
           R     +QLH  +LK G     +   N LL  Y +   L DASKLFDEMP          
Sbjct: 8   RTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMP---------- 57

Query: 117 AQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTI-HACVYKRG 175
                                    + NPF   T+I+  +++   +    + HA  +K  
Sbjct: 58  -------------------------QPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKTH 92

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFC 235
           +  +  V T      S  G++  A+ +F+ +  K+ + W  M+  Y+ + +   SL LF 
Sbjct: 93  YSWNLIVST-----LSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFK 147

Query: 236 QMRVMGYRP---NNYTITAALKSCLGLEAFGVGKSVHGCALKACYD--QDLYVGTELLEL 290
           +M +        + + ++    +C  L A   GK VH       ++  QD  + + ++  
Sbjct: 148 EMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNF 207

Query: 291 YAKSGDI-------------------------------VDAQLFFEEMPKKDVIPWSLMI 319
           Y K GD+                                DA+  F+       + W+ +I
Sbjct: 208 YGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSII 267

Query: 320 ARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLD 379
           + Y  +    EAL LF+ MR++ V  +    A++L   ++ + + L KQ+H +  K+G  
Sbjct: 268 SGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGAT 327

Query: 380 SNVFVSNALMDVYAKC-------------------------------GEIENSMILFMES 408
            ++ V++ L+D Y+KC                               G +E++  +F   
Sbjct: 328 HDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSM 387

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
           P +  ++WN+++VG  Q     +A++ FS M   D++  + +F+SV+ ACA  ++L+ G 
Sbjct: 388 PNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGE 447

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           Q+    I     +D  +  +L+D Y KCG +   R  FD M K +EVSWN M+ GY+ +G
Sbjct: 448 QLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNG 507

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
              EAL LFN+M  +  +P+ +TF G+LSAC + GL+++G+ LF++M  DY+I P IEHY
Sbjct: 508 YGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHY 567

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKP 648
           +CMV L  R+G F EA+ LI E+PFQ    +W ++L  CV   N  +G+  A+ ++++ P
Sbjct: 568 SCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDP 627

Query: 649 HDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
            + G ++ LSN+ A ++ W+  A VR+ M+ K V+K PG SW++
Sbjct: 628 GNSGAYIQLSNILATSEDWEGSAEVRELMRNKNVQKIPGCSWMD 671



 Score =  140 bits (353), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/603 (24%), Positives = 244/603 (40%), Gaps = 153/603 (25%)

Query: 158 MDLPHVCWTI------HACVYKRGHQADAFVGTS-LIDAYSVCGNVDAARQVFDGIFCKD 210
           M+L  VC TI      H  + K G+   + + T+ L+  YS  G++  A ++FD +   +
Sbjct: 1   MELHSVCRTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPN 60

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHG 270
             SW  ++  +       +SL+LF                                  H 
Sbjct: 61  PFSWNTLIEAHINLGHRNKSLELF----------------------------------HA 86

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
              K  Y  +L V T      +KSGD+  AQ  F  MP K+ + W+ MI  Y++    + 
Sbjct: 87  MPHKTHYSWNLIVST-----LSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRN 141

Query: 331 ALELFHCMR---QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG---------- 377
           +L LF  M      +V  + F  ++V  ACA    L  GKQ+H+ V   G          
Sbjct: 142 SLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLC 201

Query: 378 ------------LDSNV-----------FVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
                       LDS             F  +AL+  YA  G + ++  +F    +   V
Sbjct: 202 SSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSV 261

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
            WN++I GYV  G+  +A+ LF+ M  N +       +++L   +    ++   Q+H   
Sbjct: 262 LWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHA 321

Query: 475 IKTRYNNDIAVANALIDMYAK-------------------------------CGRINDAR 503
            K    +DI VA+ L+D Y+K                               CGR+ DA+
Sbjct: 322 FKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAK 381

Query: 504 LTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAG 563
             F+ M  +  +SWN+++ G + +   +EAL+ F+ M + + K +K +F  V+SAC+   
Sbjct: 382 EVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKS 441

Query: 564 LLDKGQSLFK-----SMSQDYNIEPCIEHYTCMVGLLGRLGK--FD-------------- 602
            L+ G+ LF       +  D  I   +  + C  GL+  +G+  FD              
Sbjct: 442 SLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLV-EMGRKVFDGMIKTDEVSWNTML 500

Query: 603 ----------EAVKLIGEIPF---QPSVMVWRALLGAC----VVQKNIDLGRFCAQHVLE 645
                     EA+ L  E+ +   +PS + +  +L AC    +V++  DL R   +H  +
Sbjct: 501 MGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFR-TMKHDYD 559

Query: 646 MKP 648
           + P
Sbjct: 560 INP 562


>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:37592279-37594828 | 20130731
          Length = 572

 Score =  317 bits (811), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 177/539 (32%), Positives = 288/539 (53%), Gaps = 25/539 (4%)

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
           Q D +     I A S  GN+ AARQ+FD    KD+V++  M+  Y +N F + S  LF  
Sbjct: 26  QQDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNS 85

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           + +      N  ITA +++    +AF            A  ++++     ++  + K G 
Sbjct: 86  IPIKNIVSWNSIITACIQNDNINDAFSY--------FTAMPEKNVASYNAMMSGFVKMGR 137

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS---KEALELFHCMRQSSVVPNNFTFASV 353
           + +A+  FEE+P+ +V+ +++MI  Y + +     K A  LF  M   + V      + +
Sbjct: 138 VEEAKKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVMISGL 197

Query: 354 LQACAAQVLLILGKQIHSNVLKVGL---DSNVFVSNALMDVYAKCGEIENSMILFMESPE 410
           ++             +H    +V +     NV    A++  + K G+I+ +  LF +   
Sbjct: 198 VE-----------NGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRC 246

Query: 411 QNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV 470
           ++   WN MI G+ Q G GE+A+NLFS M+   MQP ++TF S+  ACA  A LD G Q 
Sbjct: 247 KDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQT 306

Query: 471 HSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLS 530
           ++L IK   N+D++V+NAL+ MY+KCG I  + L FD++   + VSWN +I  ++ HGL 
Sbjct: 307 NALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLY 366

Query: 531 TEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTC 590
             A   F+ M      P+ +TF+ +LSAC  AG +D+  +LF  M   Y I P  EHY+C
Sbjct: 367 DRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSC 426

Query: 591 MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHD 650
           +V ++ R G+   A K+I E+PF+    +W A L  C +  N+ LG   A+ +L + P++
Sbjct: 427 VVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNIHSNVKLGELAARSILNLDPYN 486

Query: 651 DGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPD 709
            G +V++SN+YA A +W +V  +R  MK +G+KK+   SW++    +  F  GD SHP+
Sbjct: 487 SGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYSWMQIGNKLQCFVGGDPSHPN 545



 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 179/383 (46%), Gaps = 19/383 (4%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           S+ +++   IQN + N        + ++    ++ ++N +++ +V+   +++A K+F+E+
Sbjct: 93  SWNSIITACIQNDNINDAFSYFTAMPEK----NVASYNAMMSGFVKMGRVEEAKKVFEEI 148

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
           P  N +S+  +  G  +  +    +     LF      N    T +I  LV   L    W
Sbjct: 149 PRPNVVSYTVMIDGYMK-MEGGSGIKRARALFDAMPSRNEVSWTVMISGLVENGLHEEAW 207

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
                V+ R  Q +    T++I  +   G +D A  +F  I CKD   W  M+  +A+N 
Sbjct: 208 E----VFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNG 263

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
             EE+L LF QM   G +P++ T  +   +C  L     G+  +  A+K   + DL V  
Sbjct: 264 RGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSDLSVSN 323

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            L+ +Y+K G+IV ++L F+++   D++ W+ +IA +AQ      A   F  M  + V P
Sbjct: 324 ALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTP 383

Query: 346 NNFTFASVLQAC-----AAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIEN 400
           +  TF ++L AC       + + +    +H    K G+       + ++DV ++ G++  
Sbjct: 384 DGITFLNLLSACCRAGKVDETVNLFDLMVH----KYGILPRSEHYSCVVDVMSRAGQLLR 439

Query: 401 SMILFMESP-EQNEVTWNTMIVG 422
           +  +  E P E +   W   +VG
Sbjct: 440 ACKVIQEMPFEADASIWGAFLVG 462


>Medtr5g025580.1 | PPR containing plant-like protein | HC |
           chr5:10385696-10382561 | 20130731
          Length = 767

 Score =  314 bits (804), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 322/636 (50%), Gaps = 10/636 (1%)

Query: 63  GKQLHCDILKRGAPLDLFAH--NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           G+ +H   +K G   + F    N L++ Y Q + +D A  +F EM   + +S+  + +G 
Sbjct: 132 GECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGY 191

Query: 121 SRSHQFDHALHVILRLFKEG-HEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
           + +     A  +++ +   G  + +    TT++ L   + L     TIH    +R    D
Sbjct: 192 ASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPD 251

Query: 180 AF-VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
              +   LID YS C  V+ A  +F      D+VSW  M+  Y++N +YE++  LF ++ 
Sbjct: 252 HLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELL 311

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
             G   ++ T+ A L SC    +   GKSVH   LK+ +     +   L+++Y  SGD+ 
Sbjct: 312 CCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLT 371

Query: 299 DA-QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS-SVVPNNFTFASVLQA 356
               +  E     D+  W+ +I    + D+ +EALE F  MRQ  S   ++ T  +VL A
Sbjct: 372 SGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSA 431

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
            A   LL  GK +HS  LK    S+  V N+L+ +Y +C +I ++  +F      N  TW
Sbjct: 432 VANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTW 491

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
           N MI       +  +A+ LF  +     +P E T  SVL AC     L  G QVH  T +
Sbjct: 492 NCMISALSHNKESREALELFRHL---QFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFR 548

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
             Y  +  ++ AL+D+Y+ CGR+++A   F +  ++ E +WN+MI  Y  HG   +A+ L
Sbjct: 549 YGYQQNSFISAALVDLYSTCGRLDNAVKVF-RHSQKSESAWNSMIAAYGNHGNGEKAIEL 607

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLG 596
           F++M     K  K TFV +LSACS++GL+++G   ++ M + Y I+P  EH   +V +L 
Sbjct: 608 FHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLA 667

Query: 597 RLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVL 656
           R G+ DEA +    +    S  VW  LL  C     ++LG+  A+ + EM+P + G ++ 
Sbjct: 668 RSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYIS 727

Query: 657 LSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           L+NMY  A  W +   +R+ +  +G++K  G S ++
Sbjct: 728 LANMYVAAGSWKDATDLRQYIHDQGLRKCAGYSLID 763



 Score =  230 bits (586), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/599 (28%), Positives = 287/599 (47%), Gaps = 20/599 (3%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLD-- 96
           Q   DS +   ++      ++   G+ +HC  +K G  +D+   N L+N Y +  C D  
Sbjct: 5   QTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAK--CGDVN 62

Query: 97  --DASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL 154
             D+  LF+EM   + +S+ ++ +GC  +   + +L    R+       +    +  I  
Sbjct: 63  SSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISA 122

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAF--VGTSLIDAYSVCGNVDAARQVFDGIFCKDMV 212
             S+        IH    K G++ ++F  V  SLI  YS C  VD A  VF  +  KD+V
Sbjct: 123 CSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIV 182

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHGC 271
           SW  M+  YA N    E+  L  +M+  G ++P+  T+T  L  C  L  +  G+++HG 
Sbjct: 183 SWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGY 242

Query: 272 ALKACYDQD-LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
           A++     D L +   L+++Y+K   +  A+L F    + D++ W+ MI+ Y+Q+   ++
Sbjct: 243 AIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEK 302

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMD 390
           A  LF  +       ++ T  ++L +C +   L  GK +H   LK G  ++  + N+LM 
Sbjct: 303 AQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQ 362

Query: 391 VYAKCGEIENSMILFMESPEQNEV-TWNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQPTE 448
           +Y   G++ +   +  E+    ++ +WNT+IVG V+    ++A+  F  M  G       
Sbjct: 363 MYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDS 422

Query: 449 VTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK 508
           +T  +VL A A    L+ G  +HSL +K+ + +D  V N+LI MY +C  IN AR  F  
Sbjct: 423 ITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKF 482

Query: 509 MDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKG 568
                  +WN MI   S +  S EAL LF  +Q    KPN+ T V VLSAC+  G+L  G
Sbjct: 483 HSISNLCTWNCMISALSHNKESREALELFRHLQ---FKPNEFTIVSVLSACTRIGVLIHG 539

Query: 569 QSLFK-SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           + +   +    Y     I     +V L    G+ D AVK+      Q S   W +++ A
Sbjct: 540 KQVHGYTFRYGYQQNSFIS--AALVDLYSTCGRLDNAVKVFRHS--QKSESAWNSMIAA 594



 Score =  154 bits (389), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 197/398 (49%), Gaps = 19/398 (4%)

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI--VDA 300
           R ++ T+   + +   L+ FG G+ +H  ++K+    D+ +   L+ +YAK GD+   D+
Sbjct: 7   RFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDS 66

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           +  FEEM  KDV+ W+ ++     +   +++L  F  M  S    ++ + +  + AC++ 
Sbjct: 67  ECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSL 126

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVS--NALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
             L  G+ IH   +K+G   N FVS  N+L+ +Y++C  ++ +  +F E   ++ V+WN 
Sbjct: 127 GELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNA 186

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
           M+ GY    +  +A +L   M      QP  VT +++L  CA       G  +H   I+ 
Sbjct: 187 MMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR 246

Query: 478 RYNND-IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
               D + + N LIDMY+KC  +  A L F    + + VSWNAMI GYS +    +A NL
Sbjct: 247 HMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNL 306

Query: 537 FNKMQ--QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
           F ++     NC  +  T   +LS+C++A  L+ G+S+       + ++    ++T +V  
Sbjct: 307 FKELLCCGQNCSSS--TVFAILSSCNSANSLNFGKSV-----HIWQLKSGFLNHTLLVNS 359

Query: 595 LGRL----GKFDEAVKLIGEIPFQPSVMVWRALLGACV 628
           L ++    G       ++ E      +  W  ++  CV
Sbjct: 360 LMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCV 397



 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 4/198 (2%)

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGR 498
           MI +  +    T   V+   +       G  +H ++IK+    DI++ NALI+MYAKCG 
Sbjct: 1   MIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGD 60

Query: 499 IN--DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
           +N  D+   F++M+ ++ VSWN+++ G   +G   ++L  F +M  +  + + ++    +
Sbjct: 61  VNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAI 120

Query: 557 SACSNAGLLDKGQSLF-KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
           SACS+ G L  G+ +  + +   Y     +     ++ L  +    D A  +  E+ ++ 
Sbjct: 121 SACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKD 180

Query: 616 SVMVWRALLGACVVQKNI 633
            ++ W A++      +NI
Sbjct: 181 -IVSWNAMMEGYASNENI 197



 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 15/249 (6%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           N GK LH   LK     D    N L+  Y +   ++ A K+F    ++N  ++  +    
Sbjct: 439 NQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISAL 498

Query: 121 SRSHQFDHALHVILRL-FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
           S + +   AL +   L FK     N F   +++     + +      +H   ++ G+Q +
Sbjct: 499 SHNKESREALELFRHLQFKP----NEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQN 554

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV 239
           +F+  +L+D YS CG +D A +VF     K   +W  M+  Y  +   E++++LF +M  
Sbjct: 555 SFISAALVDLYSTCGRLDNAVKVFRHS-QKSESAWNSMIAAYGNHGNGEKAIELFHEMCD 613

Query: 240 MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL-----KACYDQDLYVGTELLELYAKS 294
           +G +    T  + L +C        G   + C L     K   +  +YV    + + A+S
Sbjct: 614 LGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYV----VNMLARS 669

Query: 295 GDIVDAQLF 303
           G I +A  F
Sbjct: 670 GRIDEAYQF 678


>Medtr8g479320.2 | PPR containing plant-like protein | HC |
           chr8:33809079-33805443 | 20130731
          Length = 498

 Score =  313 bits (802), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 162/469 (34%), Positives = 274/469 (58%), Gaps = 2/469 (0%)

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           ++L+   +M  +  +P  Y +  AL SC     + +G  +H   +++ Y+ +L++ + L+
Sbjct: 29  QALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALV 88

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNF 348
           + YAK   IVDA   F  M + D + W+ +IA ++ + + ++AL LF  M  + + PN F
Sbjct: 89  DFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCF 148

Query: 349 TFASVLQACAAQ-VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
           T  SV+ AC  Q  +L     +H +V+K G D++ FV ++L+D YA  G+I+++++LF E
Sbjct: 149 TLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNE 208

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
           + E++ V +NTMI GY Q    E A+ LF  M   +M PT+ T SS+L AC+  A L  G
Sbjct: 209 TSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQG 268

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
            QVHSL IK     ++ VA+ LIDMY+K G I++A+   D+  K+  V W +MI GY+  
Sbjct: 269 RQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQC 328

Query: 528 GLSTEALNLFNK-MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           G   EAL LF+  + +    P+ + F  VL+AC++AG +DKG+  F  M  +Y + P I+
Sbjct: 329 GRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDID 388

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
            Y C++ L  R G   +A  L+ E+P+ P+ ++W + L AC +  +++LGR  A  +++M
Sbjct: 389 IYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAAIQLIKM 448

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQG 695
           +P +   ++ L+++Y     W+  + VR  M+++  +K PG S    +G
Sbjct: 449 EPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWSMELGRG 497



 Score =  213 bits (542), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 241/432 (55%), Gaps = 17/432 (3%)

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
           H+   IHA + + G++ + F+ ++L+D Y+ C  +  A ++F  +   D VSWT ++  +
Sbjct: 63  HLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGF 122

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGK---SVHGCALKACYD 278
           + N    ++L LF +M     RPN +T+T+ + +C+G    GV +   ++H   +K  +D
Sbjct: 123 SANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQN--GVLEHCPTLHVHVIKQGFD 180

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
              +V + L++ YA  G I DA L F E  +KD + ++ MI+ Y Q+  S++AL+LF  M
Sbjct: 181 TSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEM 240

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
           R+ ++ P + T +S+L AC++  +L+ G+Q+HS V+K+G + NV+V++ L+D+Y+K G+I
Sbjct: 241 REKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDI 300

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRA 457
           + +  +  ++ ++N V W +MI+GY Q G G +A+ LF  ++   ++ P  V F++VL A
Sbjct: 301 DEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTA 360

Query: 458 CAGFAALDPGLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDARLTFDKMDKREE- 514
           C     +D G +  +  I T Y  + DI +   LID+YA+ G +  AR   ++M      
Sbjct: 361 CNHAGFIDKGEEYFNKMI-TNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNC 419

Query: 515 VSWNAMICGYSMHG---LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           + W++ +    ++G   L  EA     KM+  N  P    ++ +    +  GL ++   +
Sbjct: 420 IIWSSFLSACKIYGDVELGREAAIQLIKMEPCNAAP----YLTLAHIYTTKGLWNEASEV 475

Query: 572 FKSMSQDYNIEP 583
              M Q    +P
Sbjct: 476 RSLMQQRVKRKP 487



 Score =  186 bits (473), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 212/388 (54%), Gaps = 20/388 (5%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G Q+H  +++ G   +LF  + L++FY +   + DA+K+F  M   + +S+ +L  G S 
Sbjct: 65  GIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSA 124

Query: 123 SHQFDHALHVILRLFKE--GHEVNP--FVCTTIIKLLVSMD--LPHVCWTIHACVYKRGH 176
           + Q   AL     LFKE  G ++ P  F  T++I   V  +  L H C T+H  V K+G 
Sbjct: 125 NKQGRDAL----LLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEH-CPTLHVHVIKQGF 179

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
              +FV +SL+D Y+  G +D A  +F+    KD V +  M+  Y +N + E++L+LF +
Sbjct: 180 DTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVE 239

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           MR     P ++T+++ L +C  L     G+ VH   +K   ++++YV + L+++Y+K GD
Sbjct: 240 MREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGD 299

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQ 355
           I +AQ   ++  KK+ + W+ MI  YAQ  R  EALELF + + +  ++P++  F +VL 
Sbjct: 300 IDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLT 359

Query: 356 ACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNE 413
           AC     +  G++  + ++   GL  ++ +   L+D+YA+ G +  +  L  E P + N 
Sbjct: 360 ACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNC 419

Query: 414 VTWNTM-----IVGYVQLGDGEKAMNLF 436
           + W++      I G V+LG  E A+ L 
Sbjct: 420 IIWSSFLSACKIYGDVELGR-EAAIQLI 446



 Score =  152 bits (385), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 168/312 (53%), Gaps = 13/312 (4%)

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           I ++++S  + +ALE    M      P  +   + L +CA  +   LG QIH+ +++ G 
Sbjct: 18  IRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGY 77

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
           + N+F+ +AL+D YAKC  I ++  +F    + ++V+W ++I G+     G  A+ LF  
Sbjct: 78  EDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALD---PGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
           M+G  ++P   T +SV+ AC G   +    P L VH   IK  ++    V ++L+D YA 
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVH--VIKQGFDTSSFVISSLVDCYAN 195

Query: 496 CGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGV 555
            G+I+DA L F++  +++ V +N MI GY  +  S +AL LF +M++ N  P   T   +
Sbjct: 196 WGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSI 255

Query: 556 LSACSNAGLLDKGQ---SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP 612
           LSACS+  +L +G+   SL   M  + N+       + ++ +  + G  DEA  ++ +  
Sbjct: 256 LSACSSLAMLLQGRQVHSLVIKMGSERNVYVA----STLIDMYSKGGDIDEAQCVLDQTS 311

Query: 613 FQPSVMVWRALL 624
            + +V+ W +++
Sbjct: 312 KKNTVL-WTSMI 322


>Medtr8g479320.1 | PPR containing plant-like protein | HC |
           chr8:33809124-33805421 | 20130731
          Length = 498

 Score =  313 bits (802), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 162/469 (34%), Positives = 274/469 (58%), Gaps = 2/469 (0%)

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
           ++L+   +M  +  +P  Y +  AL SC     + +G  +H   +++ Y+ +L++ + L+
Sbjct: 29  QALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALV 88

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNF 348
           + YAK   IVDA   F  M + D + W+ +IA ++ + + ++AL LF  M  + + PN F
Sbjct: 89  DFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCF 148

Query: 349 TFASVLQACAAQ-VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
           T  SV+ AC  Q  +L     +H +V+K G D++ FV ++L+D YA  G+I+++++LF E
Sbjct: 149 TLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNE 208

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
           + E++ V +NTMI GY Q    E A+ LF  M   +M PT+ T SS+L AC+  A L  G
Sbjct: 209 TSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQG 268

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
            QVHSL IK     ++ VA+ LIDMY+K G I++A+   D+  K+  V W +MI GY+  
Sbjct: 269 RQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQC 328

Query: 528 GLSTEALNLFNK-MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           G   EAL LF+  + +    P+ + F  VL+AC++AG +DKG+  F  M  +Y + P I+
Sbjct: 329 GRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDID 388

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
            Y C++ L  R G   +A  L+ E+P+ P+ ++W + L AC +  +++LGR  A  +++M
Sbjct: 389 IYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAAIQLIKM 448

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQG 695
           +P +   ++ L+++Y     W+  + VR  M+++  +K PG S    +G
Sbjct: 449 EPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWSMELGRG 497



 Score =  213 bits (542), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 241/432 (55%), Gaps = 17/432 (3%)

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
           H+   IHA + + G++ + F+ ++L+D Y+ C  +  A ++F  +   D VSWT ++  +
Sbjct: 63  HLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGF 122

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGK---SVHGCALKACYD 278
           + N    ++L LF +M     RPN +T+T+ + +C+G    GV +   ++H   +K  +D
Sbjct: 123 SANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQN--GVLEHCPTLHVHVIKQGFD 180

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
              +V + L++ YA  G I DA L F E  +KD + ++ MI+ Y Q+  S++AL+LF  M
Sbjct: 181 TSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEM 240

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
           R+ ++ P + T +S+L AC++  +L+ G+Q+HS V+K+G + NV+V++ L+D+Y+K G+I
Sbjct: 241 REKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDI 300

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQPTEVTFSSVLRA 457
           + +  +  ++ ++N V W +MI+GY Q G G +A+ LF  ++   ++ P  V F++VL A
Sbjct: 301 DEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTA 360

Query: 458 CAGFAALDPGLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDARLTFDKMDKREE- 514
           C     +D G +  +  I T Y  + DI +   LID+YA+ G +  AR   ++M      
Sbjct: 361 CNHAGFIDKGEEYFNKMI-TNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNC 419

Query: 515 VSWNAMICGYSMHG---LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           + W++ +    ++G   L  EA     KM+  N  P    ++ +    +  GL ++   +
Sbjct: 420 IIWSSFLSACKIYGDVELGREAAIQLIKMEPCNAAP----YLTLAHIYTTKGLWNEASEV 475

Query: 572 FKSMSQDYNIEP 583
              M Q    +P
Sbjct: 476 RSLMQQRVKRKP 487



 Score =  186 bits (473), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 212/388 (54%), Gaps = 20/388 (5%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G Q+H  +++ G   +LF  + L++FY +   + DA+K+F  M   + +S+ +L  G S 
Sbjct: 65  GIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSA 124

Query: 123 SHQFDHALHVILRLFKE--GHEVNP--FVCTTIIKLLVSMD--LPHVCWTIHACVYKRGH 176
           + Q   AL     LFKE  G ++ P  F  T++I   V  +  L H C T+H  V K+G 
Sbjct: 125 NKQGRDAL----LLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEH-CPTLHVHVIKQGF 179

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
              +FV +SL+D Y+  G +D A  +F+    KD V +  M+  Y +N + E++L+LF +
Sbjct: 180 DTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVE 239

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD 296
           MR     P ++T+++ L +C  L     G+ VH   +K   ++++YV + L+++Y+K GD
Sbjct: 240 MREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGD 299

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQ 355
           I +AQ   ++  KK+ + W+ MI  YAQ  R  EALELF + + +  ++P++  F +VL 
Sbjct: 300 IDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLT 359

Query: 356 ACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNE 413
           AC     +  G++  + ++   GL  ++ +   L+D+YA+ G +  +  L  E P + N 
Sbjct: 360 ACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNC 419

Query: 414 VTWNTM-----IVGYVQLGDGEKAMNLF 436
           + W++      I G V+LG  E A+ L 
Sbjct: 420 IIWSSFLSACKIYGDVELGR-EAAIQLI 446



 Score =  152 bits (385), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 168/312 (53%), Gaps = 13/312 (4%)

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           I ++++S  + +ALE    M      P  +   + L +CA  +   LG QIH+ +++ G 
Sbjct: 18  IRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGY 77

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
           + N+F+ +AL+D YAKC  I ++  +F    + ++V+W ++I G+     G  A+ LF  
Sbjct: 78  EDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALD---PGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
           M+G  ++P   T +SV+ AC G   +    P L VH   IK  ++    V ++L+D YA 
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVH--VIKQGFDTSSFVISSLVDCYAN 195

Query: 496 CGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGV 555
            G+I+DA L F++  +++ V +N MI GY  +  S +AL LF +M++ N  P   T   +
Sbjct: 196 WGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSI 255

Query: 556 LSACSNAGLLDKGQ---SLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP 612
           LSACS+  +L +G+   SL   M  + N+       + ++ +  + G  DEA  ++ +  
Sbjct: 256 LSACSSLAMLLQGRQVHSLVIKMGSERNVYVA----STLIDMYSKGGDIDEAQCVLDQTS 311

Query: 613 FQPSVMVWRALL 624
            + +V+ W +++
Sbjct: 312 KKNTVL-WTSMI 322


>Medtr7g011840.1 | PPR containing plant-like protein | HC |
           chr7:3275571-3278623 | 20130731
          Length = 605

 Score =  313 bits (801), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 188/576 (32%), Positives = 310/576 (53%), Gaps = 13/576 (2%)

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
           P+    IHA + K     D ++   LI +YS+  N+ +A  VF+ +   ++  +  ++  
Sbjct: 35  PNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRA 94

Query: 221 YAENCFYEESLQLF---CQMRVMGYRPNNYTITAALKSCLGLEAF-GVGKSVHGCALKAC 276
           Y+ +     SL  F    +M V G   +N+T    LK C G  ++  + K VH    K  
Sbjct: 95  YSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLG 154

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFH 336
           +  D++V   L++ Y + GD+  A   F  M ++DV+ W+ M+    ++     AL++F 
Sbjct: 155 FYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFD 214

Query: 337 CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG 396
            M +   V  N       +A        L +++         + ++   + ++  Y+K G
Sbjct: 215 EMPERDRVSWNTMLDGFTKAGEMDKAFKLFERM--------AERDIVSWSTMVCGYSKNG 266

Query: 397 EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
           +++ + +LF   P +N V W T+I GY + G  ++AMNL   M  + ++  +  F S+L 
Sbjct: 267 DMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILA 326

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE-V 515
           ACA    L  G ++H   +++R+     V N+ IDMYAKCG ++DA   F+ M   ++ V
Sbjct: 327 ACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLV 386

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           SWN+MI G+ +HG   +++ LFN M +   KP++ TF+G+L AC++AGL+++G+  F SM
Sbjct: 387 SWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSM 446

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDL 635
            + Y I P IEHY CMV LLGR G   EA  L+  +PF+P+ ++   LLGAC +  ++ L
Sbjct: 447 QRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKL 506

Query: 636 GRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQG 695
               ++++ ++ P D G   LLSN+YA +  W NVA VRK M  +G +K  G+S +E + 
Sbjct: 507 ATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEE 566

Query: 696 VVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
            VH F+V D SHP +  I  M++ L    R  GYVP
Sbjct: 567 EVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQVGYVP 602



 Score =  171 bits (432), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 236/463 (50%), Gaps = 20/463 (4%)

Query: 51  LQQAIQNRH----PNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP 106
           L++ I + H    PN  KQ+H  ++K     D +    L+  Y   + L  A  +F+++P
Sbjct: 22  LEENITDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVP 81

Query: 107 LTNTISFVTLAQGCSRSHQFDHAL---HVILRLFKEGHEVNPFVCTTIIKLL-VSMDLPH 162
             N   +  L +  S S    ++L    V+L++  +G   + F    ++K    S     
Sbjct: 82  DPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLS 141

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +HA V K G   D FV  SLID Y  CG+V+ A +VF G+  +D+VSW  MVG   
Sbjct: 142 LVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLV 201

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +N   + +L++F +M        N  +    K+    +AF +         +   ++D+ 
Sbjct: 202 KNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKL--------FERMAERDIV 253

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
             + ++  Y+K+GD+  A++ F+  P K+++ W+ +I+ YA+  + KEA+ L   M +S 
Sbjct: 254 SWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSG 313

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           +  ++  F S+L ACA   +L LGK++H + L+     +  V N+ +D+YAKCG ++++ 
Sbjct: 314 LRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAF 373

Query: 403 ILFME-SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
            +F     E++ V+WN+MI G+   G GEK++ LF++M+    +P   TF  +L AC   
Sbjct: 374 RVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHA 433

Query: 462 AALDPGLQVHSLTIKTRYN--NDIAVANALIDMYAKCGRINDA 502
             ++ G + +  +++  Y     I     ++D+  + G + +A
Sbjct: 434 GLVNEG-RGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEA 475



 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 170/360 (47%), Gaps = 11/360 (3%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K +H  + K G   D+F  N L++ Y +   ++ A K+F  M   + +S+ ++  G  ++
Sbjct: 144 KMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKN 203

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
              D AL V    F E  E +     T++            + +    ++R  + D    
Sbjct: 204 GDLDGALKV----FDEMPERDRVSWNTMLDGFTKAGEMDKAFKL----FERMAERDIVSW 255

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           ++++  YS  G++D AR +FD    K++V WT ++  YAE    +E++ L  +M   G R
Sbjct: 256 STMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLR 315

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
            ++    + L +C      G+GK +H   L++ +     V    +++YAK G + DA   
Sbjct: 316 LDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRV 375

Query: 304 FEEMP-KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
           F  M  +KD++ W+ MI  +      ++++ELF+ M +    P+ +TF  +L AC    L
Sbjct: 376 FNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGL 435

Query: 363 LILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
           +  G+    ++ +V G+   +     ++D+  + G ++ +  L    P E N +   T++
Sbjct: 436 VNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLL 495


>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:13924435-13921068 | 20130731
          Length = 598

 Score =  311 bits (796), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 183/547 (33%), Positives = 296/547 (54%), Gaps = 20/547 (3%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFC-KDMVSWTGMVGCYAENCFYEE 229
           V+    + D+ + T++I  Y  CG ++ AR++FD +   K ++ WT MV  Y +    EE
Sbjct: 23  VFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSGYIKINRIEE 82

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
           + +LF +M V      N  I    ++    EA  +             ++++     ++ 
Sbjct: 83  AERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDL--------FGRMPERNVVSWNTVMT 134

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
             A  G I DA+  F EM ++DV+ W+ M+A  +++ R  +A ++F  M   +VV  N  
Sbjct: 135 ALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAM 194

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
            A   Q       L L +++         + ++   N ++  + + G++  +  LF   P
Sbjct: 195 IAGYAQNGRFDEALKLFERMP--------ERDMPSWNTMVTGFIQNGDLNRAEKLFHAMP 246

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGFAALDPGL 468
           ++N +TW  M+ GYVQ G  E+A+ LF+ M  ND ++PT  TF +VL AC+  A L  G 
Sbjct: 247 KKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQ 306

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK--MDKREEVSWNAMICGYSM 526
           Q+H +  KT +     V +ALI+MY+KCG  + A+  FD       + ++WN MI  Y+ 
Sbjct: 307 QIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAH 366

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           HG   EA+ LFNKMQ+   + N +T+VG+L+ACS+AGL D+G   F  + ++  ++   +
Sbjct: 367 HGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYMQVRED 426

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HYTC++ L GR G+ DEA+ +I  +  + S+ VW ALL  C V  N D+GR  A  VL+M
Sbjct: 427 HYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLAGCSVHGNADIGRLVADKVLKM 486

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
           +P +  T++L SNMYA     +  A+VR  MK KG+KK+PG SW++    V  F V D S
Sbjct: 487 EPENADTYLLASNMYASVGMREEAANVRMKMKDKGLKKQPGCSWIDVGNTVQVFVVNDKS 546

Query: 707 HPDNKLI 713
           H   +++
Sbjct: 547 HSQFEML 553



 Score =  166 bits (419), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 219/486 (45%), Gaps = 94/486 (19%)

Query: 85  LLNFYVQFDCLDDASKLFD--------------------------------EMPLTNTIS 112
           +++ Y++   +++A KLFD                                EMP+ N +S
Sbjct: 38  MISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVS 97

Query: 113 FVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHAC-- 170
           + T+  G +R+ +   A+     LF    E N     T++  L        C  I     
Sbjct: 98  WNTMIDGYARNGRTQEAMD----LFGRMPERNVVSWNTVMTALAH------CGRIDDAER 147

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEES 230
           ++    + D    T+++   S  G VD AR VFD +  +++VSW  M+  YA+N  ++E+
Sbjct: 148 LFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAMIAGYAQNGRFDEA 207

Query: 231 LQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLEL 290
           L+LF +M      P                                 ++D+     ++  
Sbjct: 208 LKLFERM------P---------------------------------ERDMPSWNTMVTG 228

Query: 291 YAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR-QSSVVPNNFT 349
           + ++GD+  A+  F  MPKK+VI W+ M+  Y Q   S+EAL+LF+ M+    + P   T
Sbjct: 229 FIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGT 288

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME-- 407
           F +VL AC+    L  G+QIH  + K     + +V +AL+++Y+KCG+   +  +F +  
Sbjct: 289 FVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGL 348

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
           S   + + WN MI  Y   G G +A+ LF+ M     Q  +VT+  +L AC+     D G
Sbjct: 349 SGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEG 408

Query: 468 LQVHSLTIKTRYNNDIAVA----NALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMIC 522
            +     +K RY   + V       LID+  + GR+++A    + + K   +S W A++ 
Sbjct: 409 FKYFDELLKNRY---MQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLA 465

Query: 523 GYSMHG 528
           G S+HG
Sbjct: 466 GCSVHG 471



 Score =  120 bits (300), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 51/368 (13%)

Query: 293 KSGDIVDAQLFFEEMPKKD--------------------------------VIPWSLMIA 320
           + G I +A+  F+EM ++D                                VI W+ M++
Sbjct: 13  REGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVS 72

Query: 321 RYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS 380
            Y + +R +EA  LF+ M   +VV  N       +    Q  + L  ++         + 
Sbjct: 73  GYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMP--------ER 124

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI 440
           NV   N +M   A CG I+++  LF E  E++ V+W TM+ G  + G  + A ++F  M 
Sbjct: 125 NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMP 184

Query: 441 GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIN 500
             ++    V++++++   A     D  L++     +     D+   N ++  + + G +N
Sbjct: 185 IRNV----VSWNAMIAGYAQNGRFDEALKL----FERMPERDMPSWNTMVTGFIQNGDLN 236

Query: 501 DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN-CKPNKLTFVGVLSAC 559
            A   F  M K+  ++W AM+ GY  HGLS EAL LFNKMQ  +  KP   TFV VL AC
Sbjct: 237 RAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGAC 296

Query: 560 SNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGE-IPFQPSVM 618
           S+   L +GQ + + +S+    +      + ++ +  + G F  A K+  + +     ++
Sbjct: 297 SDLAGLPEGQQIHQMISKTV-FQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLI 355

Query: 619 VWRALLGA 626
            W  ++ A
Sbjct: 356 AWNGMIAA 363



 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 15/289 (5%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P  +  S+ A++    QN   +   +L     +R    D+ + N ++  ++Q   L+ A 
Sbjct: 184 PIRNVVSWNAMIAGYAQNGRFDEALKL----FERMPERDMPSWNTMVTGFIQNGDLNRAE 239

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           KLF  MP  N I++  +  G  +    + AL +  ++ +    + P   T +  L    D
Sbjct: 240 KLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKM-QANDGLKPTTGTFVTVLGACSD 298

Query: 160 LPHV--CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK--DMVSWT 215
           L  +     IH  + K   Q   +V ++LI+ YS CG+   A+++FD       D+++W 
Sbjct: 299 LAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWN 358

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
           GM+  YA + +  E++ LF +M+ +G++ N+ T    L +C     F  G       LK 
Sbjct: 359 GMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKN 418

Query: 276 CYDQ---DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP-WSLMIA 320
            Y Q   D Y  T L++L  ++G + +A    E + K+  +  W  ++A
Sbjct: 419 RYMQVREDHY--TCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLA 465



 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 54/257 (21%)

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G+I  +  +F E  E++   W TMI GY++ G   +A  LF  +   D + + + ++   
Sbjct: 15  GQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRL---DAEKSVIVWT--- 68

Query: 456 RACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEV 515
                                           A++  Y K  RI +A   F++M  R  V
Sbjct: 69  --------------------------------AMVSGYIKINRIEEAERLFNEMPVRNVV 96

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           SWN MI GY+ +G + EA++LF +M + N     +++  V++A ++ G +D  + LF  M
Sbjct: 97  SWNTMIDGYARNGRTQEAMDLFGRMPERNV----VSWNTVMTALAHCGRIDDAERLFNEM 152

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDL 635
                 E  +  +T MV  L + G+ D+A  +   +P + +V+ W A++           
Sbjct: 153 R-----ERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIR-NVVSWNAMIAGYAQN----- 201

Query: 636 GRFC-AQHVLEMKPHDD 651
           GRF  A  + E  P  D
Sbjct: 202 GRFDEALKLFERMPERD 218



 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 13/142 (9%)

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           N  I    + G+IN+AR  FD+M +R+   W  MI GY   GL  EA  LF+++   + +
Sbjct: 5   NYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRL---DAE 61

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPC--IEHYTCMVGLLGRLGKFDEA 604
            + + +  ++S       +++ + LF  M       P   +  +  M+    R G+  EA
Sbjct: 62  KSVIVWTAMVSGYIKINRIEEAERLFNEM-------PVRNVVSWNTMIDGYARNGRTQEA 114

Query: 605 VKLIGEIPFQPSVMVWRALLGA 626
           + L G +P + +V+ W  ++ A
Sbjct: 115 MDLFGRMP-ERNVVSWNTVMTA 135


>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:4606693-4603955 | 20130731
          Length = 735

 Score =  310 bits (795), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 207/703 (29%), Positives = 328/703 (46%), Gaps = 150/703 (21%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           ++  +N +L+ Y+Q      A + FD+MP  N +S+  +  G +     D A  V    F
Sbjct: 102 NIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKV----F 157

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVD 197
            E  E N                  V W                   S++      G+++
Sbjct: 158 DEMPERNV-----------------VSWN------------------SMVVGLIRNGDLE 182

Query: 198 AARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCL 257
            AR+VFD    K++VSW  M+  Y EN   +++  LF Q+                    
Sbjct: 183 EARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIEC------------------ 224

Query: 258 GLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSL 317
                                +++   T ++  Y + GD+ +A   F+ MP+K+V+ W+ 
Sbjct: 225 ---------------------RNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTA 263

Query: 318 MIARYAQSDRSKEALELF-HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL-- 374
           MI  +A +   +EAL LF   M  S   PN  TF S++ ACA      LGKQ+H+ ++  
Sbjct: 264 MIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILN 323

Query: 375 ---------KVG------------LDS--NVFVS----------NALMDVYAKCGEIENS 401
                    ++G            +DS  +VF            N++++ Y + G++  +
Sbjct: 324 RWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKA 383

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLG-------------DGEK----------------- 431
             LF   P +N++ W  MI GY+  G             D +K                 
Sbjct: 384 QELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNEL 443

Query: 432 ---AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT--RYNNDIAVA 486
              A+NLF+ M+     P   T++ +  A    A LD G Q+H++ +KT   Y  D+ + 
Sbjct: 444 IAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLE 503

Query: 487 NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           N+LI MYAKCG I DA   F  M+ R+++SWN+MI G S HG + EALN++  M +    
Sbjct: 504 NSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVY 563

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
           P+ +TF+GVL+AC++AG +DKG  LF  M  DY ++P +EHY  ++ +LGR G+  +A +
Sbjct: 564 PDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEE 623

Query: 607 LIGEIPFQPSVMVWRALLGACVVQK-NIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAK 665
            +  +P +P+  +W AL+G C + K + D+ R  A  +LE+ P +   HV L N+YA   
Sbjct: 624 FVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELDPLNAPGHVTLCNIYAAND 683

Query: 666 RWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHP 708
           R     S+R+ M+ KGV+K PG SW+  +G VH FS GD   P
Sbjct: 684 RHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGDRLDP 726



 Score =  173 bits (438), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 248/566 (43%), Gaps = 109/566 (19%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           +Y A+L   +Q+      K+   D+ +R    ++ +   +L+ Y     +DDA K+FDEM
Sbjct: 105 TYNAMLSAYLQSGMTRQAKRFFDDMPER----NVVSWTAMLSGYAGLGWIDDARKVFDEM 160

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS---MDLPH 162
           P  N +S+ ++  G  R+   + A  V    F +  + N      +I+  V    MD   
Sbjct: 161 PERNVVSWNSMVVGLIRNGDLEEARKV----FDDTPDKNVVSWNAMIEGYVENGRMDDAK 216

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
             +    C        +    TS+I  Y   G+V+ A ++F  +  K++VSWT M+G +A
Sbjct: 217 DLFDQIEC-------RNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFA 269

Query: 223 ENCFYEESLQLFCQMRVMG-YRPNNYTITAALKSCLGLEAFGVGKSVHG----------- 270
            N FY E+L LF  M  +   +PN  T  + + +C G+    +GK +H            
Sbjct: 270 WNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDD 329

Query: 271 ---------------CAL------------KACYDQDLYVGTELLELYAKSGDIVDAQLF 303
                          C L            K C DQ       ++  Y ++G +  AQ  
Sbjct: 330 YDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSF---NSMINGYVQAGQLHKAQEL 386

Query: 304 FEEMPKKDVI---------------------------------PWSLMIARYAQSDRSKE 330
           F+ +P ++ I                                  W+LMI  Y Q++   E
Sbjct: 387 FDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAE 446

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV--GLDSNVFVSNAL 388
           A+ LF  M      P N T+A +  A  +   L LG Q+H+  LK     + +V++ N+L
Sbjct: 447 AINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSL 506

Query: 389 MDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTE 448
           + +YAKCGEIE++  +F     +++++WN+MI+G    G   +A+N++ +M+   + P  
Sbjct: 507 ISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDA 566

Query: 449 VTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANAL------IDMYAKCGRINDA 502
           VTF  VL ACA    +D G ++ S+ +     ND A+   L      I++  + GR+ DA
Sbjct: 567 VTFLGVLTACAHAGFVDKGCELFSVML-----NDYALQPGLEHYVSIINILGRAGRVKDA 621

Query: 503 RLTFDKMD-KREEVSWNAMI--CGYS 525
                ++  +     W A+I  CG S
Sbjct: 622 EEFVLRLPVEPNHTIWGALIGVCGLS 647



 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 221/484 (45%), Gaps = 46/484 (9%)

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHG 270
           +V WT M+  YA++ + E++  LF  M        N  ++A L+S +  +A         
Sbjct: 72  VVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQA--------- 122

Query: 271 CALKACYD----QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSD 326
              K  +D    +++   T +L  YA  G I DA+  F+EMP+++V+ W+ M+    ++ 
Sbjct: 123 ---KRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNG 179

Query: 327 RSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSN 386
             +EA ++F      +VV  N      ++         L  QI           NV    
Sbjct: 180 DLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECR--------NVITWT 231

Query: 387 ALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG-NDMQ 445
           +++  Y + G++  +  LF   PE+N V+W  MI G+   G   +A+ LF  M+  +D +
Sbjct: 232 SMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAK 291

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY---NNDIAVANALIDMYAKCGRINDA 502
           P E TF S++ ACAG      G Q+H+  I  R+   + D  +  +L+ MY+ CG ++ A
Sbjct: 292 PNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSA 351

Query: 503 RLTFD-KMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           R  F+  M   ++ S+N+MI GY   G   +A  LF+    T    NK+ +  ++S   +
Sbjct: 352 RSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFD----TVPIRNKIAWTCMISGYLS 407

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ---PSVM 618
           AG + K  +LF  M  D + +     +T M+    +     EA+ L  E+  Q   P   
Sbjct: 408 AGQVLKASNLFDDMP-DSDKDSIA--WTLMIYGYVQNELIAEAINLFAEMMAQGASPINS 464

Query: 619 VWRALLGACVVQKNIDLGRFCAQHVLEMKP-HDDGTHVLLSN----MYAVAKRWDNVASV 673
            +  L GA      +DLG     H +++K  ++    V L N    MYA     ++   +
Sbjct: 465 TYAVLFGAVGSVAYLDLG--WQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRI 522

Query: 674 RKNM 677
             NM
Sbjct: 523 FSNM 526



 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 157/326 (48%), Gaps = 28/326 (8%)

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKD--- 311
           SC  L +F +    H      C +      ++LL  Y  +G + +A+      P  +   
Sbjct: 18  SCFSLRSFSLKPRSHFPLHYECDE------SQLLH-YLTNGFLHEARTILHSFPSGNIHS 70

Query: 312 -VIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
            V+ W+ M+  YA+    ++A  LF  M   ++V  N   ++ LQ+   +      K+  
Sbjct: 71  RVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQ----AKRFF 126

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGE 430
            ++     + NV    A++  YA  G I+++  +F E PE+N V+WN+M+VG ++ GD E
Sbjct: 127 DDMP----ERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLE 182

Query: 431 KAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALI 490
           +A  +F      ++    V++++++        +D    +    I+ R   ++    ++I
Sbjct: 183 EARKVFDDTPDKNV----VSWNAMIEGYVENGRMDDAKDLFD-QIECR---NVITWTSMI 234

Query: 491 DMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF-NKMQQTNCKPNK 549
             Y + G +N+A   F  M ++  VSW AMI G++ +G   EAL LF + M  ++ KPN+
Sbjct: 235 SGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNE 294

Query: 550 LTFVGVLSACSNAGLLDKGQSLFKSM 575
            TFV ++ AC+  G    G+ L   M
Sbjct: 295 ETFVSLVYACAGMGFPCLGKQLHAQM 320



 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 121/276 (43%), Gaps = 19/276 (6%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  S+ +++   +Q    +  ++L   +  R       A   +++ Y+    +  AS LF
Sbjct: 363 DDQSFNSMINGYVQAGQLHKAQELFDTVPIRNK----IAWTCMISGYLSAGQVLKASNLF 418

Query: 103 DEMPLTN--TISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           D+MP ++  +I++  +  G  ++     A+++   +  +G          +   + S+  
Sbjct: 419 DDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAY 478

Query: 161 PHVCWTIHACVYKR--GHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
             + W +HA   K    ++ D ++  SLI  Y+ CG ++ A ++F  + C+D +SW  M+
Sbjct: 479 LDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMI 538

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY- 277
              +++    E+L ++  M   G  P+  T    L +C        G    GC L +   
Sbjct: 539 MGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACA-----HAGFVDKGCELFSVML 593

Query: 278 -DQDLYVGTE----LLELYAKSGDIVDAQLFFEEMP 308
            D  L  G E    ++ +  ++G + DA+ F   +P
Sbjct: 594 NDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLP 629


>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:24165948-24164077 | 20130731
          Length = 550

 Score =  310 bits (795), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 171/530 (32%), Positives = 290/530 (54%), Gaps = 34/530 (6%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HA +   G+     + ++LI  Y+ CG +  AR++FD I   ++  W  ++   A   F
Sbjct: 51  LHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCGF 110

Query: 227 YEESLQLFCQMRVMGYRPNN--YTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
           ++ +L++F +M+ +  + +N  + I + LK+C  +     G+ VH   LK  ++ D +V 
Sbjct: 111 HDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVS 170

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           + L+ +Y+K G++ DA+  F+ M  KD++  + +++ YAQ     EAL L   M+   V 
Sbjct: 171 SALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVN 230

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           PN  T+ +++   A +      +++ S + ++  +  V                      
Sbjct: 231 PNVVTWNALISGFAQKC----DREMVSEIFRLMNEDRV---------------------- 264

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
                E + V+W +++ G+VQ    E+A + F  M+     PT  T S++L ACA  A +
Sbjct: 265 -----EPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARV 319

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
             G ++H   +     +D+ V +AL+DMYAKCG I++AR  F KM ++  V+ N+MI GY
Sbjct: 320 RFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGY 379

Query: 525 SMHGLSTEALNLFNKMQQTNC-KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEP 583
           + HG   EA+ LFN+M+     K + LTF   L+ACS+ G ++ GQ LFK M + Y IEP
Sbjct: 380 ANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEP 439

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
            +EHY CMV L GR GK +EA  +I  +P +P + VW ALL AC    +++L    A+H+
Sbjct: 440 RLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHGHVELAEVAAKHL 499

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVEN 693
            E++P   G  +LLS++YA A  W  V  +++ +K+  ++K  GLSW++N
Sbjct: 500 SELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLSWIDN 549



 Score =  204 bits (518), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 249/493 (50%), Gaps = 40/493 (8%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRG-APLDLFAHNILLNFYVQFDCLDDASKL 101
           +  SYA L++    +R    GK+LH  +   G    +L A N L+  Y     L  A KL
Sbjct: 28  EPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASN-LITLYTTCGQLSIARKL 86

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVI--LRLFKEGHEVNPFVCTTIIKLLVSMD 159
           FD++P TN   ++ L   C+R    DHAL V   ++   +    + FV  +++K    + 
Sbjct: 87  FDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVG 146

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
                  +H  V K   + DAFV ++LI  YS CG V  AR+VFDG+  KD+V+   +V 
Sbjct: 147 DRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVS 206

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            YA+     E+L L   M++MG  PN  T  A                + G A K   D+
Sbjct: 207 GYAQQGLPNEALSLVENMKLMGVNPNVVTWNAL---------------ISGFAQKC--DR 249

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           ++     + E++         +L  E+  + DV+ W+ +++ + Q+ R++EA + F  M 
Sbjct: 250 EM-----VSEIF---------RLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKML 295

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
                P + T +++L ACA +  +  GK+IH   L +G++ +++V +AL+D+YAKCG I 
Sbjct: 296 LLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFIS 355

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTE-VTFSSVLRAC 458
            +  LF + PE+N VT N+MI GY   G  E+A+ LF+ M    +   + +TF++ L AC
Sbjct: 356 EARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTAC 415

Query: 459 AGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEV- 515
           +    ++ G ++  + ++ +Y  +  + +   ++D++ + G++ +A      M  + ++ 
Sbjct: 416 SHVGDIELGQRLFKI-MQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLF 474

Query: 516 SWNAMICGYSMHG 528
            W A++     HG
Sbjct: 475 VWGALLAACRNHG 487



 Score =  126 bits (317), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 7/320 (2%)

Query: 349 TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           ++A +++       L  GK++H+ +   G      +++ L+ +Y  CG++  +  LF + 
Sbjct: 31  SYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKI 90

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTF--SSVLRACAGFAALDP 466
           P+ N   W  +I    + G  + A+ +FS M   + Q +   F   SVL+AC        
Sbjct: 91  PQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIY 150

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G QVH L +K  +  D  V++ALI MY+KCG + DAR  FD M  ++ V+ NA++ GY+ 
Sbjct: 151 GEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQ 210

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
            GL  EAL+L   M+     PN +T+  ++S  +     +    +F+ M++D  +EP + 
Sbjct: 211 QGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNED-RVEPDVV 269

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGE---IPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
            +T ++    +  + +EA     +   + F P+     ALL AC  +  +  G+    + 
Sbjct: 270 SWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYA 329

Query: 644 LEMKPHDD-GTHVLLSNMYA 662
           L +   DD      L +MYA
Sbjct: 330 LVIGVEDDLYVRSALVDMYA 349


>Medtr7g105440.1 | PPR containing plant-like protein | HC |
           chr7:42760641-42762768 | 20130731
          Length = 589

 Score =  309 bits (792), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 170/514 (33%), Positives = 280/514 (54%), Gaps = 17/514 (3%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSV--CGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
           +HA + +RG + D F+ ++ I   +      +  +  VF+ +       W   +  + ++
Sbjct: 34  VHASIIQRGLEQDQFLISNFISLANTLSISTLSYSTAVFNRVLNPSTFLWNTFIRTHCQS 93

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
            F+ +++  F +M+  G  P++YT  + +K+C G     VGKSVHG   +   DQDL+VG
Sbjct: 94  SFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFVG 153

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           T L+++Y K G+I DA+  F+E+  ++V+ W+ M+  Y  +    EA ++F  M   +V 
Sbjct: 154 TTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVA 213

Query: 345 PNNFT---FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
             N     F  V    +A+            V     + NV     ++D YAK G++E+S
Sbjct: 214 SWNAMIRGFVKVGDLSSAR-----------GVFDSMPEKNVVSFTTMIDGYAKAGDMESS 262

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             LF ++ E++ V W+ +I GYVQ G+  +A+ +F  M    + P E    S++ A +  
Sbjct: 263 RFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQL 322

Query: 462 AALDPGLQVHSLTIKTRYN-NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
             L    +V S    +  +     V +AL+DM AKCG +  A   F +M KR+ VS+ +M
Sbjct: 323 GDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRDLVSYCSM 382

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           I G+S+HG   +A+NLFN+M      P++  F  VL+ACS++GL+DKG   F SM ++Y 
Sbjct: 383 IHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYG 442

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCA 640
           I P  +H+ CMV LLGR G+  +A +LI  +  +P+   W AL+GAC +  + +LG   A
Sbjct: 443 ISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLHGDTELGEIVA 502

Query: 641 QHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVR 674
             + E++P +   +VLLSN+YA A RW +V+ VR
Sbjct: 503 NRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVR 536



 Score =  191 bits (485), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 239/471 (50%), Gaps = 15/471 (3%)

Query: 64  KQLHCDILKRGAPLDLF--AHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           +Q+H  I++RG   D F  ++ I L   +    L  ++ +F+ +   +T  + T  +   
Sbjct: 32  QQVHASIIQRGLEQDQFLISNFISLANTLSISTLSYSTAVFNRVLNPSTFLWNTFIRTHC 91

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
           +S  F   +   +R+  EG   + +   ++IK         V  ++H  V++ G   D F
Sbjct: 92  QSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLF 151

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           VGT+L+D Y  CG +  AR+VFD +  +++VSWT MV  Y       E+ ++F +M +  
Sbjct: 152 VGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRN 211

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
               N  I   +K      A GV  S+         ++++   T +++ YAK+GD+  ++
Sbjct: 212 VASWNAMIRGFVKVGDLSSARGVFDSMP--------EKNVVSFTTMIDGYAKAGDMESSR 263

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             FE+  +KDV+ WS +I+ Y Q+  + EAL++F  M    V+P+ F   S++ A +   
Sbjct: 264 FLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLG 323

Query: 362 LLILGKQIHSNVLKVGLD-SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
            L L +++ S V    +D    +V +AL+D+ AKCG +E ++ LF E P+++ V++ +MI
Sbjct: 324 DLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRDLVSYCSMI 383

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
            G+   G GE A+NLF+ M+   + P E  F+ VL AC+    +D G +  + +++  Y 
Sbjct: 384 HGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFN-SMEENYG 442

Query: 481 NDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEV-SWNAMICGYSMHG 528
                 +   ++D+  + G++ DA      M       +W A+I    +HG
Sbjct: 443 ISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLHG 493


>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15372357-15367000 | 20130731
          Length = 686

 Score =  308 bits (788), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 192/634 (30%), Positives = 320/634 (50%), Gaps = 9/634 (1%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTL--AQGC 120
           G  +H D +K     D F  + L+  Y Q+  + DA K+FDE+   +  ++ ++  A G 
Sbjct: 51  GIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGH 110

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKR--GHQA 178
           S       A +    + ++G   N     +++     +        +H    +R  G   
Sbjct: 111 SGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGD 170

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMV---SWTGMVGCYAENCFYEESLQLFC 235
           D F  T+L+D Y  CG V  A  VF  +  + M    SW  ++  Y  N    E+ +LF 
Sbjct: 171 DVF-ETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFR 229

Query: 236 QMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSG 295
           +M      P+  T+  A+  C+ L     G S+HG  +    + DL   T L++LY K  
Sbjct: 230 RMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKI- 288

Query: 296 DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQ 355
           DI  A+  FE +  KD + +++M+  Y ++    EA+ +F  M +++   N   F +++ 
Sbjct: 289 DITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLIS 348

Query: 356 ACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVT 415
           A +    + L + IH  VL+    ++V ++N ++  YAK G + ++  +F     ++ V+
Sbjct: 349 ALSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVS 408

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           W +MI GYV  G  +KA+ LF  +    +    VT   +L+A +    L    +VH  + 
Sbjct: 409 WTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSY 468

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           +  +  D++V N+LI  YAKCG++  AR  F +M +R   SWNAMI  Y+MHG  TE L 
Sbjct: 469 RFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLE 528

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           LF+ M+     P+++TF  +L+ACS++GL+++G  +F  M ++Y I P   HY+C+V LL
Sbjct: 529 LFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLL 588

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHV 655
            R G+  EA  L+  +P   S     ALL AC +  + ++G    + +L+++PH  G + 
Sbjct: 589 SRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQILKLEPHSSGPYA 648

Query: 656 LLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
           L+SN+ A   RWD VA +R   K    K  PG S
Sbjct: 649 LVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYS 682



 Score =  172 bits (436), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 170/320 (53%), Gaps = 9/320 (2%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
           TIT  LK+CL L     G  VH  ++K  ++ D +VG+ L+ LY++ G I DA   F+E+
Sbjct: 34  TITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEI 93

Query: 308 PKKDVIPWSLMIARYAQSDRS--KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
             KD+  ++ MI  Y  S  S    A      M+Q  ++PN  T  S++ A A    L  
Sbjct: 94  TNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALRE 153

Query: 366 GKQIHSNVLK--VGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPEQNEV-TWNTMI 420
           G+ +H   ++  +GL  +VF    L+D+Y KCG +  +  +F  M++ +  +V +WN +I
Sbjct: 154 GQAVHGYAVRREIGLGDDVF-ETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALI 212

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
            GY++ G   +A  LF  M+  ++ P  +T ++ +  C     L  G+ +H   I     
Sbjct: 213 AGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMGVE 272

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
            D+  + AL+D+Y K   I  AR  F+++  ++ V +N M+ GY  +GL  EA+N+F +M
Sbjct: 273 LDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREM 331

Query: 541 QQTNCKPNKLTFVGVLSACS 560
            +TN   N   F+ ++SA S
Sbjct: 332 VKTNASTNVALFLNLISALS 351


>Medtr3g077200.1 | PPR containing plant-like protein | HC |
           chr3:34651569-34656476 | 20130731
          Length = 553

 Score =  307 bits (787), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/528 (32%), Positives = 285/528 (53%), Gaps = 1/528 (0%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +HAC+ K     D F  T +I  Y+   +++ A  VFD    + +  W  M+  +A+   
Sbjct: 25  LHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKARR 84

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           +  ++ LF  M V   RP+NYT   A+++C     FG+ + VHG A+      D    + 
Sbjct: 85  FSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICCSA 144

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPN 346
           L+  Y+K G + +A+  F+ + + D++ W+ +I+ Y  S   +  +++F  MR +   P+
Sbjct: 145 LVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPD 204

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFM 406
            FT A +L   A   LL +G+++H    K GLDS+  V + L+ +Y++C  I+++  +F 
Sbjct: 205 GFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFC 264

Query: 407 ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDP 466
                + VTW+ +I GY Q G+ +KA+  F  +     +   V  ++VL +    A + P
Sbjct: 265 GIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLP 324

Query: 467 GLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSM 526
           G ++H   ++    +D+ V++ALIDMY+KCG ++     F  M +R  +S+N+MI  Y +
Sbjct: 325 GCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAYGL 384

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           HG +++A  +F++M Q    P++ TF  +LSAC +AGL+  G+ LF  M  ++NI+   E
Sbjct: 385 HGCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPE 444

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY  MV LLG +G+ +EA  L   +P      +  ALL  C    N +L    AQ + + 
Sbjct: 445 HYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAILGALLSCCDSYGNSELAETVAQQIFKS 504

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
            P D+   V+LSN+YA   RWD+V  +R  M   G KK  G+SW+E  
Sbjct: 505 NPADNVYRVMLSNIYAGDGRWDDVKKLRDKMV-GGQKKMRGVSWIEGS 551



 Score =  178 bits (452), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 198/395 (50%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           KQLH  +LK     D F    ++  Y   + ++ A  +FD+    +   + ++ +  +++
Sbjct: 23  KQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKA 82

Query: 124 HQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
            +F +A+ +   +  +    + +     I+         +   +H      G   D    
Sbjct: 83  RRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICC 142

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           ++L+ AYS  G V  AR+VFDGI   D+V W  ++  Y  +  +E  +Q+F  MR+ G +
Sbjct: 143 SALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKK 202

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P+ +T+   L          +G+ +HG + K+  D D +VG+ L+ +Y++   I  A   
Sbjct: 203 PDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRV 262

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F  +   D++ WS +I+ Y+Q    ++AL  F  +   S   ++   A+VL +      +
Sbjct: 263 FCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANV 322

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
           + G +IH  VL+ GL+S+V VS+AL+D+Y+KCG +     +F    E+N +++N+MI+ Y
Sbjct: 323 LPGCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAY 382

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRAC 458
              G   +A  +F  M+   + P E TFS++L AC
Sbjct: 383 GLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSAC 417



 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 151/296 (51%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
           K +H C LK    +D +  T+++ LYA +  I  A   F++   + V  W+ MI  +A++
Sbjct: 23  KQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKA 82

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
            R   A+ LF  M    + P+N+T+A  ++ACA      + + +H + + VGL  +    
Sbjct: 83  RRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICC 142

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
           +AL+  Y+K G +  +  +F    E + V WN++I  Y   G  E  + +FSSM     +
Sbjct: 143 SALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKK 202

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLT 505
           P   T + +L   A  + L  G ++H L+ K+  ++D  V + L+ MY++C  I+ A   
Sbjct: 203 PDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRV 262

Query: 506 FDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           F  +   + V+W+A+I GYS  G   +AL  F K+   + K + +    VL++ + 
Sbjct: 263 FCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQ 318



 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 158/327 (48%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+++YA  ++    +      + +H   +  G  LD    + L++ Y +   + +A ++F
Sbjct: 103 DNYTYACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVF 162

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           D +   + + + +L      S  ++  + +   +   G + + F    ++  +    L  
Sbjct: 163 DGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLS 222

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
           +   +H    K G  +D  VG+ L+  YS C  +D+A +VF GIF  D+V+W+ ++  Y+
Sbjct: 223 IGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYS 282

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +   Y+++L  F ++ +   + ++  I   L S   +     G  +HG  L+   + D+ 
Sbjct: 283 QCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCEIHGYVLRHGLESDVK 342

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V + L+++Y+K G +      F  M ++++I ++ MI  Y     + +A  +F  M Q  
Sbjct: 343 VSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKG 402

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQI 369
           +VP+  TF+++L AC    L+  G+++
Sbjct: 403 LVPDEGTFSALLSACCHAGLVKDGREL 429



 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           KQ+H+ +LK  L  + F +  ++ +YA    I  +  +F ++  ++   WN+MI  + + 
Sbjct: 23  KQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKA 82

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ--VHSLTIKTRYNNDIA 484
                A++LF +M+ +D++P   T++  +RACA   + D G+   VH   +      D  
Sbjct: 83  RRFSNAISLFRTMLVDDIRPDNYTYACAIRACAD--SFDFGMLRVVHGSAVSVGLGLDPI 140

Query: 485 VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN 544
             +AL+  Y+K G +++AR  FD + + + V WN++I  Y   G+    + +F+ M+   
Sbjct: 141 CCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAG 200

Query: 545 CKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
            KP+  T  G+L   +++ LL  GQ L   +SQ   ++      + +V +  R    D A
Sbjct: 201 KKPDGFTLAGLLGGIADSSLLSIGQEL-HGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSA 259

Query: 605 VKLIGEIPFQPSVMVWRALL 624
            ++   I F P ++ W AL+
Sbjct: 260 YRVFCGI-FNPDLVTWSALI 278



 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           Q+H+  +KT  + D   A  +I +YA    IN A   FDK   R    WN+MI  ++   
Sbjct: 24  QLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKAR 83

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNA---GLLDKGQSLFKSMSQDYNIEPCI 585
             + A++LF  M   + +P+  T+   + AC+++   G+L        ++S    ++P  
Sbjct: 84  RFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHG--SAVSVGLGLDPIC 141

Query: 586 EHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
              + +V    +LG   EA ++   I  +P +++W +L+ A
Sbjct: 142 --CSALVSAYSKLGVVHEARRVFDGI-VEPDLVLWNSLISA 179


>Medtr4g108890.1 | PPR containing plant-like protein | HC |
           chr4:45133263-45138694 | 20130731
          Length = 548

 Score =  307 bits (787), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 182/495 (36%), Positives = 263/495 (53%), Gaps = 39/495 (7%)

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
           +LL  YA SG +  A   F ++       W+ MI  YA S    ++++ ++ M  ++  P
Sbjct: 53  KLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEP 112

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE------ 399
           + FT++ +L AC    L+  G+Q+H  VL  G  S+VFV+  L++ YA CG +E      
Sbjct: 113 DGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVF 172

Query: 400 -----------NSMIL--------------FMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
                      NS+++              F E P +N V+W TMI GY Q G   +A++
Sbjct: 173 DDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALS 232

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYA 494
           LF  M    ++  +V   +VL ACA    L  G  +H    + +    + + NAL+ MYA
Sbjct: 233 LFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYA 292

Query: 495 KCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM-----QQTNCKPNK 549
            CG I++A   F KM  +  VSW  +I  ++  GL  EAL+LF  M      ++  +P+ 
Sbjct: 293 SCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDG 352

Query: 550 LTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIG 609
            TF+  L ACS+AG +++G  +F+SM   + I   IEHY CMV LL R G  DEA +LI 
Sbjct: 353 TTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLIE 412

Query: 610 EIPFQPSVMVWRALLGACVVQKNIDLG-RFCAQHVLEMKPHDD--GTHVLLSNMYAVAKR 666
            +PF+P+  +W ALLG C + KN +L  R     V E+   D   G  VLLSN+YA A R
Sbjct: 413 TMPFKPNDAIWGALLGGCRIHKNSELASRVANTLVAELDSTDQAAGYLVLLSNIYAFAGR 472

Query: 667 WDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRD 726
           W +V +VR+ M   GVKK PG SW++  GVVH F VGD +H  + LI   L  + ++ R 
Sbjct: 473 WQDVIAVRQKMIEMGVKKPPGQSWIQIYGVVHNFVVGDMTHKHSSLIYETLCEITEQARV 532

Query: 727 AGYVPDCNAVLLDVE 741
            GY PD   VLLD E
Sbjct: 533 EGYKPDITEVLLDAE 547



 Score =  155 bits (393), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 192/412 (46%), Gaps = 38/412 (9%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IH  V   G      +   L+  Y+  G +  A ++F  I       W  M+  YA +  
Sbjct: 35  IHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSIT 94

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
             +S+Q + QM +    P+ +T +  L +C+       G+ +HG  L   Y  D++V T 
Sbjct: 95  PWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTN 154

Query: 287 LLELYA-------------------------------KSGDIVDAQLFFEEMPKKDVIPW 315
           L+  YA                               K GD   A+  FEE+P ++V+ W
Sbjct: 155 LINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSW 214

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           + MIA YAQ+ +  EAL LF  MR++ V  +     +VL ACA    L LG+ IH  V +
Sbjct: 215 TTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQE 274

Query: 376 VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNL 435
               ++V ++NALM +YA CG I+ +  +F +   +  V+W  +I+ + + G G++A++L
Sbjct: 275 RQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDL 334

Query: 436 FSSMIGN-----DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT-RYNNDIAVANAL 489
           F  M+ +      ++P   TF + L AC+    ++ G ++    I T R +  I     +
Sbjct: 335 FKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCM 394

Query: 490 IDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHGLSTEALNLFNKM 540
           +D+ ++ G +++A    + M  K  +  W A++ G  +H  S  A  + N +
Sbjct: 395 VDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASRVANTL 446



 Score =  120 bits (301), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 34/297 (11%)

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
           S+LQ C      IL  QIH+ V+  GL     +   L+  YA  G+++++  LF++    
Sbjct: 20  SLLQTCNNTETNIL--QIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFIQIHNP 77

Query: 412 NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVH 471
               WN MI  Y       K++  ++ M+ N  +P   T+S +L AC     +  G Q+H
Sbjct: 78  KTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLH 137

Query: 472 SLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA------------ 519
            + +   Y +D+ V   LI+ YA CG +  AR  FD M +R  VSWN+            
Sbjct: 138 GIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFD 197

Query: 520 -------------------MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACS 560
                              MI GY+ +G   EAL+LF +M++   + +++  V VLSAC+
Sbjct: 198 AARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACA 257

Query: 561 NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSV 617
             G L  G+ +   + Q+   +  +     ++ +    G  DEA ++  ++ ++ +V
Sbjct: 258 ELGDLKLGRWIHWYV-QERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTV 313



 Score =  114 bits (285), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 203/474 (42%), Gaps = 61/474 (12%)

Query: 65  QLHCDILKRGAPLDLFAHNI---LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           Q+H  ++  G       HNI   LL+FY     L  A KLF ++    T  +  + +  +
Sbjct: 34  QIHTQVILNGLS---HKHNIIAKLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYA 90

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
            S     ++    ++     E + F  + ++   V   L      +H  V  +G+ +D F
Sbjct: 91  SSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVF 150

Query: 182 VGTSLIDAYSVCGNV-------------------------------DAARQVFDGIFCKD 210
           V T+LI+ Y+ CG V                               DAAR VF+ I  ++
Sbjct: 151 VNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRN 210

Query: 211 MVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHG 270
           +VSWT M+  YA+N    E+L LF QMR      +   + A L +C  L    +G+ +H 
Sbjct: 211 VVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHW 270

Query: 271 CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKE 330
              +      + +   L+ +YA  G I +A   F +M  K  + W+++I  +A+    KE
Sbjct: 271 YVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKE 330

Query: 331 ALELFHCM-----RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL---KVGLDSNV 382
           AL+LF  M      +S + P+  TF + L AC+    +  G +I  +++   ++ L    
Sbjct: 331 ALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEH 390

Query: 383 FVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
           +    ++D+ ++ G ++ +  L    P + N+  W  ++ G     + E A  + ++++ 
Sbjct: 391 Y--GCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASRVANTLVA 448

Query: 442 NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAK 495
            ++  T+          AG+  L   +         R+ + IAV   +I+M  K
Sbjct: 449 -ELDSTD--------QAAGYLVLLSNI----YAFAGRWQDVIAVRQKMIEMGVK 489


>Medtr3g109380.2 | PPR containing plant-like protein | HC |
           chr3:50595856-50594240 | 20130731
          Length = 538

 Score =  307 bits (786), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 174/534 (32%), Positives = 287/534 (53%), Gaps = 45/534 (8%)

Query: 251 AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
            +LK+C  +      K +H   +K    Q  ++ T++L+     G +  A L F+++   
Sbjct: 15  TSLKNCFKITQL---KKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHP 71

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCM---RQSSVVPNNFTFASVLQACAAQVLLILGK 367
           ++  ++ +I  YA +     A+ +F  M     +SV P+ FTF  V+++C   +   LG 
Sbjct: 72  NIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGM 131

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           Q+H  V K G D +    NAL+D+Y K G++ N+  +F E   ++ ++WN++I GYV+LG
Sbjct: 132 QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLG 191

Query: 428 DGEKAMNLFSSM--------------------------IGNDMQ-----PTEVTFSSVLR 456
               A  LF  M                          +  +MQ     P E++  +VL 
Sbjct: 192 QMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLP 251

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS 516
           ACA   AL+ G  +H    K  +     + NALI+MYAKCG I++A   FD++ +++ +S
Sbjct: 252 ACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVIS 311

Query: 517 WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMS 576
           W+ MI G + HG   EA+ LF +M +    PN++TF+GVL ACS+ GL D+G   F  MS
Sbjct: 312 WSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMS 371

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLG 636
             Y+IEP IEHY C++ LLGR G   +A+  I ++P +P   +W +LL +C + +N+ + 
Sbjct: 372 ASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIA 431

Query: 637 RFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGV 696
               + ++E++P + G +VLL+NMYA   +W++V+++RK ++ K +KK PG S +E   V
Sbjct: 432 VIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNV 491

Query: 697 VHYFSVGDTSHPDNKLICAMLEWLN-KKTRDAGYVPDCNAVLLDVEDDEKERHL 749
           V  F   D S P ++ +  +LE L   +TR        N ++  VE+D  +  L
Sbjct: 492 VQEFVSSDDSKPFSQEVFWILEGLALNQTR-------TNDLMEPVEEDADKSSL 538



 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 182/397 (45%), Gaps = 36/397 (9%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA V K       F+ T ++D+    G+V  A  +F  +   ++ ++  ++  YA N  
Sbjct: 29  IHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRH 88

Query: 227 YEESLQLFCQMRVMGYR---PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           +  ++ +F QM         P+ +T    +KSC G+    +G  VHG   K   D     
Sbjct: 89  HSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCIT 148

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY---AQSDRSKE---------- 330
              L+++Y K GD+ +A   FEEM  +DVI W+ +I  Y    Q + ++E          
Sbjct: 149 ENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTI 208

Query: 331 ------------------ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
                             AL++F  M+   + P+  +  +VL ACA    L +GK IH  
Sbjct: 209 VSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMY 268

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
             K G      + NAL+++YAKCG I+ +  LF +  E++ ++W+TMI G    G G +A
Sbjct: 269 ADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEA 328

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS-LTIKTRYNNDIAVANALID 491
           + LF  M    + P E+TF  VL AC+     D GL+    ++       +I     LID
Sbjct: 329 IQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLID 388

Query: 492 MYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
           +  + G +  A  T  KM  K +   WN+++    +H
Sbjct: 389 LLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH 425



 Score =  123 bits (309), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 26/318 (8%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHN----ILLNFYVQFDCLDDASKL 101
           SYA LL + +          LH +I    A +  +AHN      ++ +VQ       S  
Sbjct: 59  SYATLLFKQL----------LHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVF 108

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DL 160
            D+     T  FV  +      H+    +H ++  +K G + +      +I +     DL
Sbjct: 109 PDKF----TFPFVIKSCTGILCHRLGMQVHGLV--YKFGADFHCITENALIDMYTKFGDL 162

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            + C      V++     D     SLI  Y   G +++AR++FD +  + +VSWT M+  
Sbjct: 163 TNAC-----KVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITG 217

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y     Y ++L +F +M+++G  P+  +I A L +C  L A  VGK +H  A K  + + 
Sbjct: 218 YGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRK 277

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
             +   L+E+YAK G I +A   F+++ +KDVI WS MI   A   +  EA++LF  M +
Sbjct: 278 TGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK 337

Query: 341 SSVVPNNFTFASVLQACA 358
             V PN  TF  VL AC+
Sbjct: 338 VRVAPNEITFLGVLLACS 355


>Medtr3g109380.1 | PPR containing plant-like protein | HC |
           chr3:50595856-50594240 | 20130731
          Length = 538

 Score =  307 bits (786), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 174/534 (32%), Positives = 287/534 (53%), Gaps = 45/534 (8%)

Query: 251 AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
            +LK+C  +      K +H   +K    Q  ++ T++L+     G +  A L F+++   
Sbjct: 15  TSLKNCFKITQL---KKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHP 71

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCM---RQSSVVPNNFTFASVLQACAAQVLLILGK 367
           ++  ++ +I  YA +     A+ +F  M     +SV P+ FTF  V+++C   +   LG 
Sbjct: 72  NIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGM 131

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           Q+H  V K G D +    NAL+D+Y K G++ N+  +F E   ++ ++WN++I GYV+LG
Sbjct: 132 QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLG 191

Query: 428 DGEKAMNLFSSM--------------------------IGNDMQ-----PTEVTFSSVLR 456
               A  LF  M                          +  +MQ     P E++  +VL 
Sbjct: 192 QMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLP 251

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS 516
           ACA   AL+ G  +H    K  +     + NALI+MYAKCG I++A   FD++ +++ +S
Sbjct: 252 ACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVIS 311

Query: 517 WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMS 576
           W+ MI G + HG   EA+ LF +M +    PN++TF+GVL ACS+ GL D+G   F  MS
Sbjct: 312 WSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMS 371

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLG 636
             Y+IEP IEHY C++ LLGR G   +A+  I ++P +P   +W +LL +C + +N+ + 
Sbjct: 372 ASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIA 431

Query: 637 RFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGV 696
               + ++E++P + G +VLL+NMYA   +W++V+++RK ++ K +KK PG S +E   V
Sbjct: 432 VIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNV 491

Query: 697 VHYFSVGDTSHPDNKLICAMLEWLN-KKTRDAGYVPDCNAVLLDVEDDEKERHL 749
           V  F   D S P ++ +  +LE L   +TR        N ++  VE+D  +  L
Sbjct: 492 VQEFVSSDDSKPFSQEVFWILEGLALNQTR-------TNDLMEPVEEDADKSSL 538



 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 182/397 (45%), Gaps = 36/397 (9%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA V K       F+ T ++D+    G+V  A  +F  +   ++ ++  ++  YA N  
Sbjct: 29  IHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRH 88

Query: 227 YEESLQLFCQMRVMGYR---PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           +  ++ +F QM         P+ +T    +KSC G+    +G  VHG   K   D     
Sbjct: 89  HSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCIT 148

Query: 284 GTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY---AQSDRSKE---------- 330
              L+++Y K GD+ +A   FEEM  +DVI W+ +I  Y    Q + ++E          
Sbjct: 149 ENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTI 208

Query: 331 ------------------ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
                             AL++F  M+   + P+  +  +VL ACA    L +GK IH  
Sbjct: 209 VSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMY 268

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKA 432
             K G      + NAL+++YAKCG I+ +  LF +  E++ ++W+TMI G    G G +A
Sbjct: 269 ADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEA 328

Query: 433 MNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS-LTIKTRYNNDIAVANALID 491
           + LF  M    + P E+TF  VL AC+     D GL+    ++       +I     LID
Sbjct: 329 IQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLID 388

Query: 492 MYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMH 527
           +  + G +  A  T  KM  K +   WN+++    +H
Sbjct: 389 LLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH 425



 Score =  123 bits (309), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 26/318 (8%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHN----ILLNFYVQFDCLDDASKL 101
           SYA LL + +          LH +I    A +  +AHN      ++ +VQ       S  
Sbjct: 59  SYATLLFKQL----------LHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVF 108

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM-DL 160
            D+     T  FV  +      H+    +H ++  +K G + +      +I +     DL
Sbjct: 109 PDKF----TFPFVIKSCTGILCHRLGMQVHGLV--YKFGADFHCITENALIDMYTKFGDL 162

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
            + C      V++     D     SLI  Y   G +++AR++FD +  + +VSWT M+  
Sbjct: 163 TNAC-----KVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITG 217

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           Y     Y ++L +F +M+++G  P+  +I A L +C  L A  VGK +H  A K  + + 
Sbjct: 218 YGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRK 277

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
             +   L+E+YAK G I +A   F+++ +KDVI WS MI   A   +  EA++LF  M +
Sbjct: 278 TGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK 337

Query: 341 SSVVPNNFTFASVLQACA 358
             V PN  TF  VL AC+
Sbjct: 338 VRVAPNEITFLGVLLACS 355


>Medtr4g118700.1 | PPR containing plant-like protein | HC |
           chr4:49164700-49162766 | 20130731
          Length = 625

 Score =  305 bits (782), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 185/608 (30%), Positives = 309/608 (50%), Gaps = 65/608 (10%)

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR-VMG 241
            TS I + +  G +  AR++FD +  +D V+W  M+  Y+    Y+++  LF  MR +  
Sbjct: 8   ATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISD 67

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            +P+N++ +AA+ SC G      G  +H   + + Y   L V   L+++Y K  +  DA+
Sbjct: 68  SKPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDAR 127

Query: 302 LFFEE-------------------------------MPKKDVIPWSLMIARYAQSDRSKE 330
             F+E                               MP+K  I W+++IA +A+    + 
Sbjct: 128 KVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEA 187

Query: 331 ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS-----NVFVS 385
            L LF  M ++   P+ +TF++++ AC   +  + G  +H  V+K G  +     N  VS
Sbjct: 188 CLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVS 247

Query: 386 --------------------------NALMDVYAKCGEIENSMILFMESPEQNEVTWNTM 419
                                     NA++D + K G+ + +++ F ++PE+N V+W +M
Sbjct: 248 FYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSM 307

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           IVGY + G+G+ A++LF  M  N  Q  ++   +VL ACA  A L  G  VHS  I    
Sbjct: 308 IVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGL 367

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
           +  + V N+LI+MYAKCG I  ++L    ++ ++ VSWN+M+  + ++G   EA+ +F +
Sbjct: 368 DKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFRE 427

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
           M  +  +P+++TF G+L  CS+ GL+D+G + F+SMS +Y +   ++H  CMV +LGR G
Sbjct: 428 MVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGG 487

Query: 600 KFDEAVKLIGEIP--FQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLL 657
              EA  L  +     +        LLGAC    ++  G    ++V  ++P  +  +VLL
Sbjct: 488 YVAEAQSLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNLEPKKEVGYVLL 547

Query: 658 SNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAML 717
           SNMY  + +W     VRK M  +GVKK PG SW+E + VV  F  G+  +P    I  +L
Sbjct: 548 SNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSGNNLYPCMADISKIL 607

Query: 718 EWLNKKTR 725
            +L  + R
Sbjct: 608 YFLELEMR 615



 Score =  174 bits (441), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 220/484 (45%), Gaps = 76/484 (15%)

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVI--LRLFKEGHEVNPFVCTTIIKLL 155
           A KLFDEMP  +T+++  +    SR   +     +   +R   +    N F  +  I   
Sbjct: 24  ARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDN-FSYSAAINSC 82

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWT 215
                      +H+ V   G+Q+   V  +LID Y  C N + AR+VFD +   + V+W 
Sbjct: 83  AGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWC 142

Query: 216 GMVGCYAENCFY-------------------------------EESLQLFCQMRVMGYRP 244
            ++  YA  C +                               E  L LF +M    Y+P
Sbjct: 143 SLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQP 202

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGC-----ALKACYDQDLYVGTELLELYA------- 292
           + +T +A + +C   E+    +S+HGC      +K+ +   + V   ++  YA       
Sbjct: 203 DQWTFSALMSAC--TESM---ESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGD 257

Query: 293 ------------------------KSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS 328
                                   K GD   A L F++ P+K+++ W+ MI  Y ++   
Sbjct: 258 AVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNG 317

Query: 329 KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL 388
             AL LF  M+++S   ++    +VL ACA+  +L+ GK +HS ++ +GLD  +FV N+L
Sbjct: 318 DLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSL 377

Query: 389 MDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTE 448
           +++YAKCG+IE S +      +++ V+WN+M+  +   G G +A+ +F  M+ + ++P E
Sbjct: 378 INMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDE 437

Query: 449 VTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFD 507
           VTF+ +L  C+    +D G     S++++      +     ++DM  + G + +A+    
Sbjct: 438 VTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLAR 497

Query: 508 KMDK 511
           K  K
Sbjct: 498 KYSK 501



 Score =  110 bits (276), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 156/379 (41%), Gaps = 64/379 (16%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+ SY+A +           G +LH  ++  G    L   N L++ Y +    +DA K+F
Sbjct: 71  DNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVF 130

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVI---------------------------LR 135
           DEM  +N +++ +L    + + +FD A  +                            L 
Sbjct: 131 DEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLH 190

Query: 136 LFKEG----HEVNPFVCTTIIKLLV-SMDLPHVCWTIHACVYKRGHQADAFVGTSL---- 186
           LFKE     ++ + +  + ++     SM+  H C  +H  V K G      V  S+    
Sbjct: 191 LFKEMCENLYQPDQWTFSALMSACTESMESLHGC-MMHCFVIKSGWSTAMEVNNSIVSFY 249

Query: 187 ---------------------------IDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
                                      IDA+   G+   A   F     K++VSWT M+ 
Sbjct: 250 AKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIV 309

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
            Y  N   + +L LF  M+   ++ ++    A L +C  L     GK VH C +    D+
Sbjct: 310 GYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDK 369

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
            L+VG  L+ +YAK GDI  ++L    +  KD++ W+ M+  +  + R  EA+ +F  M 
Sbjct: 370 YLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMV 429

Query: 340 QSSVVPNNFTFASVLQACA 358
            S V P+  TF  +L  C+
Sbjct: 430 ASGVRPDEVTFTGLLMTCS 448



 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 139/306 (45%), Gaps = 40/306 (13%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDA 98
           QP  D  +++AL+    ++     G  +HC ++K G    +  +N +++FY + +C  DA
Sbjct: 201 QP--DQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDA 258

Query: 99  SKLFD-------------------------------EMPLTNTISFVTLAQGCSRSHQFD 127
            K+F+                               + P  N +S+ ++  G +R+   D
Sbjct: 259 VKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGD 318

Query: 128 HALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLI 187
            AL + L + +   +++  V   ++    S+ +      +H+C+   G     FVG SLI
Sbjct: 319 LALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLI 378

Query: 188 DAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNY 247
           + Y+ CG+++ ++    GI  KD+VSW  M+  +  N    E++ +F +M   G RP+  
Sbjct: 379 NMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEV 438

Query: 248 TITAALKSC--LGL--EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           T T  L +C  LGL  E F   +S+   +L+    Q +     ++++  + G + +AQ  
Sbjct: 439 TFTGLLMTCSHLGLIDEGFAFFQSM---SLEYGLVQGMDHVACMVDMLGRGGYVAEAQSL 495

Query: 304 FEEMPK 309
             +  K
Sbjct: 496 ARKYSK 501


>Medtr7g005870.1 | PPR containing plant-like protein | HC |
           chr7:378521-375734 | 20130731
          Length = 601

 Score =  305 bits (781), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 169/472 (35%), Positives = 265/472 (56%), Gaps = 10/472 (2%)

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
           +RP++YT T  LK C   +A   G  +HG  LK  +  DLYVGT L+++Y K GD+  A+
Sbjct: 119 FRPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFAR 178

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F+EM  + ++ W+ +I  YA+     EA +LF  M    V   N      ++     +
Sbjct: 179 KVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDL 238

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
              L  ++           NV    +++  Y++ G+++ +  LF   PE+N ++WN MI 
Sbjct: 239 ARDLFDKMRV--------KNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIR 290

Query: 422 GYVQLGDGEKAMNLFSSMIGN-DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
           GY Q G    A+ LF  M GN D++  EVT  SVL A A  +ALD G  VH    + + +
Sbjct: 291 GYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLD 350

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
             + V NAL+DMYAKCG I  A+L F++M +++  SWNA+I GY ++G + EAL +F  M
Sbjct: 351 GSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMM 410

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
            +   +PN++T   VLSAC++ GL+++G+  F++M + + I P IEHY CM+ LLGR G+
Sbjct: 411 LREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIEHYGCMIDLLGRAGR 469

Query: 601 FDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNM 660
            DEA KLI  +P+ P+ ++  + L AC   +++       +  ++M+    G +V+L N+
Sbjct: 470 LDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERILKVAVKMEKEGAGDYVMLRNL 529

Query: 661 YAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
           YA  +RW +V  V++ MK++G  KE   S +E  G    F  G  SH  + L
Sbjct: 530 YATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYYSHSHSHL 581



 Score =  169 bits (428), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 192/380 (50%), Gaps = 10/380 (2%)

Query: 125 QFDHALHVILRLFKE-GHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
           QF+H   +  +  K+     + +  T I+K     D     + IH  V K     D +VG
Sbjct: 102 QFNHGFTLYNQFSKDCFFRPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVG 161

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           TSL+D Y   G+V  AR+VFD +  + +VSWT ++  YA      E+ +LF  M      
Sbjct: 162 TSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVA 221

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
             N  I   +K    +    + + +          +++   T ++  Y++ GD+ +A+  
Sbjct: 222 AFNVMIDGYVK----MGRMDLARDL----FDKMRVKNVISWTSMVHGYSEDGDVDEARFL 273

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS-SVVPNNFTFASVLQACAAQVL 362
           F+ MP+K+V+ W+ MI  Y Q+ RS +AL+LF  MR +  V  N  T  SVL A A    
Sbjct: 274 FDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSA 333

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
           L LG  +H  V +  LD +V V NAL+D+YAKCGEI  + ++F E  E++  +WN +I G
Sbjct: 334 LDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALING 393

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND 482
           Y   G  ++A+ +F+ M+    +P ++T +SVL AC     ++ G +      +      
Sbjct: 394 YGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMERFGIVPQ 453

Query: 483 IAVANALIDMYAKCGRINDA 502
           I     +ID+  + GR+++A
Sbjct: 454 IEHYGCMIDLLGRAGRLDEA 473



 Score =  149 bits (376), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 214/499 (42%), Gaps = 54/499 (10%)

Query: 44  SHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFD 103
           S+++  +L+    +     G Q+H  +LK    LDL+    L++ YV+F  +  A K+FD
Sbjct: 123 SYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFD 182

Query: 104 EMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV 163
           EM + + +S+  +  G +R      A     +LF    + +      +I   V M    +
Sbjct: 183 EMSVRSLVSWTAVIVGYARCGDMVEAR----KLFDGMVDRDVAAFNVMIDGYVKMGRMDL 238

Query: 164 CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAE 223
              +    + +    +    TS++  YS  G+VD AR +FD +  K+++SW  M+  Y +
Sbjct: 239 ARDL----FDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQ 294

Query: 224 NCFYEESLQLFCQMRV-MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           N    ++L+LFC+MR  +    N  T+ + L +   L A  +G  VHG   +   D  ++
Sbjct: 295 NGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVH 354

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V   L+++YAK G+I  A+L FEEM +KD   W+ +I  Y  +  +KEALE+F  M +  
Sbjct: 355 VCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREG 414

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
             PN  T  SVL AC    L+  G++    + + G+   +     ++D+  + G ++ + 
Sbjct: 415 FEPNQITMTSVLSACNHCGLVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAGRLDEAE 474

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            L    P                                    P E+  +S L AC  F 
Sbjct: 475 KLIQAMP----------------------------------YDPNEIILTSFLFACCYFE 500

Query: 463 ALDPGLQVHSLTIKTRYN--NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
            +    ++  + +K       D  +   L     +   + D +    K    +EV+W+ +
Sbjct: 501 DVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVI 560

Query: 521 ---------ICGYSMHGLS 530
                    + GY  H  S
Sbjct: 561 EVDGRFREFVAGYYSHSHS 579


>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:20800229-20798334 | 20130731
          Length = 403

 Score =  304 bits (779), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 174/451 (38%), Positives = 256/451 (56%), Gaps = 55/451 (12%)

Query: 372 NVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEK 431
           NV    +D +++  N ++ VY   G +  +  LF E  E++ V+W+T+I GYVQ+G   +
Sbjct: 6   NVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFME 65

Query: 432 AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALID 491
            +  F +M+ ++++P E T                   V +L IK    ND  +A +LID
Sbjct: 66  DLEFFHNMLQSEVKPNEYTM------------------VSALAIKM---NDRLLA-SLID 103

Query: 492 MYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKL 550
           MYAKCG I+ A   F +   KR+   WNAMI G++MHG   EA++LF +M+     PNK+
Sbjct: 104 MYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPNKV 163

Query: 551 TFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGE 610
           TF+ +L+ACS+  ++ +G+S F+ MS DY I P IEHY CMV LL R     EA ++I  
Sbjct: 164 TFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMILS 223

Query: 611 IPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNV 670
           +P  P V +W ALL AC + K+++ G    + + E+ P+  G +VLL N+Y+ + RW+  
Sbjct: 224 MPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEA 283

Query: 671 ASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYV 730
             +R   +R  +++                            I + LE + +K + AGYV
Sbjct: 284 RILR---ERNEIRE----------------------------IYSFLEEMIRKLKIAGYV 312

Query: 731 PDCNAVLLDVEDDE-KERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKL 789
           P+   VLLD +D+E KE  L VHSE+LA+AFGL+       I I+KNLR+C DCH  IK 
Sbjct: 313 PELGEVLLDFDDEEDKETTLSVHSEKLAIAFGLMNTAPGTPICIVKNLRVCGDCHEAIKF 372

Query: 790 ISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           IS+V  R I+VRD  R+HHF+ GVCSC DYW
Sbjct: 373 ISKVYDRVIIVRDRMRYHHFKDGVCSCKDYW 403



 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 27/248 (10%)

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           D+DLY    ++ +Y  SG+++ A+  F+EM ++DV+ WS +IA Y Q     E LE FH 
Sbjct: 13  DRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFMEDLEFFHN 72

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M QS V PN +T  S L       LL                       +L+D+YAKCGE
Sbjct: 73  MLQSEVKPNEYTMVSALAIKMNDRLLA----------------------SLIDMYAKCGE 110

Query: 398 IENSMILFMESPEQNEV-TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
           I+++  +F E   + +V  WN MI G+   G  E+A++LF  M    + P +VTF ++L 
Sbjct: 111 IDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPNKVTFIALLN 170

Query: 457 ACAGFAALDPGLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDARLTFDKMDKREE 514
           AC+    +  G     L + + Y  N +I     ++D+ ++   + +A      M    +
Sbjct: 171 ACSHGYMIKEGKSYFEL-MSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMILSMPMAPD 229

Query: 515 VS-WNAMI 521
           V+ W A++
Sbjct: 230 VAIWGALL 237



 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 137/339 (40%), Gaps = 63/339 (18%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           DL++ N ++  YV    +  A  LFDEM   + +S+ T+  G  +   F   L     + 
Sbjct: 15  DLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFMEDLEFFHNML 74

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVD 197
           +   EV P   T +  L + M+                   D  +  SLID Y+ CG +D
Sbjct: 75  QS--EVKPNEYTMVSALAIKMN-------------------DRLLA-SLIDMYAKCGEID 112

Query: 198 AARQVFDGIFCKDMV-SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC 256
           +A  VF     K  V  W  M+G +A +   EE++ LF QM+V    PN  T  A L +C
Sbjct: 113 SASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPNKVTFIALLNAC 172

Query: 257 LGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWS 316
                       HG  +K         G    EL +    I             ++  + 
Sbjct: 173 -----------SHGYMIKE--------GKSYFELMSSDYGI-----------NPEIEHYG 202

Query: 317 LMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV 376
            M+   ++S+  KEA E+   M    + P+   + ++L AC     +  G +I   + ++
Sbjct: 203 CMVDLLSRSELLKEAEEMILSM---PMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEI 259

Query: 377 GLDSNVFVSNALM-DVYAKCGEIENSMILFMESPEQNEV 414
             D N    N L+ ++Y+  G    + IL     E+NE+
Sbjct: 260 --DPNHIGCNVLLGNIYSTSGRWNEARIL----RERNEI 292


>Medtr7g105540.1 | PPR containing plant-like protein | HC |
           chr7:42802997-42805935 | 20130731
          Length = 596

 Score =  304 bits (779), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 175/545 (32%), Positives = 291/545 (53%), Gaps = 26/545 (4%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSV--CGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN 224
           +HA + +RG + D  + ++ I   +         +  VF+ +       W   +  + ++
Sbjct: 34  VHASIIQRGLEQDQVLISNFISLANTLSISTRSYSTAVFNRVLNPSTFLWNTFIRTHCQS 93

Query: 225 CFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG 284
            F+ +++  F +M+  G  P++YT  + +K+C G     VGKSVHG   +   DQDL++G
Sbjct: 94  SFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFMG 153

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           T L+++Y K G I DA+  F E+ +++V+ W+ M+  Y  +    +A ++F  M   +V 
Sbjct: 154 TTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPLRNVA 213

Query: 345 PNNFT---FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENS 401
             N     F  V    +A+            V     + NV     ++D YAK G++E+S
Sbjct: 214 SWNAMIRGFVKVGDLSSAR-----------GVFDSMPEKNVVSFTTMVDGYAKAGDMESS 262

Query: 402 MILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGF 461
             LF ++ E++ VTW+ +I GYVQ G+  +A+ +F  M   ++ P E     ++ A +  
Sbjct: 263 RFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQL 322

Query: 462 AALDPGLQVHSLTIKTRYNNDIA-----VANALIDMYAKCGRINDARLTFDKMDKREEVS 516
             L    +V S       NN I      V +AL+DM AKCG +  A   F +M +R+ VS
Sbjct: 323 GDLKLAQRVDSYV----GNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPERDLVS 378

Query: 517 WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMS 576
           + +MI G+S+HG   +A+NLFN+M      P++  F  VL+ACS++GL+DKG   F SM 
Sbjct: 379 YCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSME 438

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLG 636
           ++Y I P  +H+ CMV LLGR G+  +A +LI  +  +P+   W AL+GAC +Q + +LG
Sbjct: 439 ENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLQGDTELG 498

Query: 637 RFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVR-KNMKRKGVKKEPGLSWVENQG 695
              A  + E++P +   +VLLSN+YA A RW +V+ VR +N++   +        +E Q 
Sbjct: 499 EIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVRIQNVQNMEIGMSSCPVDLEAQQ 558

Query: 696 VVHYF 700
           + H F
Sbjct: 559 LFHGF 563



 Score =  179 bits (454), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 235/471 (49%), Gaps = 15/471 (3%)

Query: 64  KQLHCDILKRGAPLD--LFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           +Q+H  I++RG   D  L ++ I L   +       ++ +F+ +   +T  + T  +   
Sbjct: 32  QQVHASIIQRGLEQDQVLISNFISLANTLSISTRSYSTAVFNRVLNPSTFLWNTFIRTHC 91

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
           +S  F   +   +R+  EG   + +   ++IK         V  ++H  V++ G   D F
Sbjct: 92  QSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLF 151

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           +GT+LID Y  CG +  AR+VF+ +  +++VSWT MV  Y       ++ ++F  M +  
Sbjct: 152 MGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPLRN 211

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
               N  I   +K      A GV  S+         ++++   T +++ YAK+GD+  ++
Sbjct: 212 VASWNAMIRGFVKVGDLSSARGVFDSMP--------EKNVVSFTTMVDGYAKAGDMESSR 263

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             FE+  +KDV+ WS +I+ Y Q+  + EAL++F  M   +V+P+ F    ++ A +   
Sbjct: 264 FLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLG 323

Query: 362 LLILGKQIHSNVLKVGLD-SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
            L L +++ S V    +D     V +AL+D+ AKCG +E ++ LF E PE++ V++ +MI
Sbjct: 324 DLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPERDLVSYCSMI 383

Query: 421 VGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
            G+   G GE A+NLF+ M+   + P E  F+ VL AC+    +D G +  + +++  Y 
Sbjct: 384 HGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFN-SMEENYG 442

Query: 481 NDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEV-SWNAMICGYSMHG 528
                 +   ++D+  + G++ DA      M       +W A+I    + G
Sbjct: 443 ISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLQG 493


>Medtr3g005330.1 | PPR containing plant-like protein | HC |
           chr3:156847-154639 | 20130731
          Length = 479

 Score =  304 bits (779), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/436 (37%), Positives = 260/436 (59%), Gaps = 11/436 (2%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
           K +H       ++ +L +  +++   A S ++  A   F+++PK D   W+ MI  +  S
Sbjct: 29  KQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNS 88

Query: 326 D-RSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFV 384
              S  A+  F  M Q +  P+NFTF+ +L+  A    + LGKQ+H ++ K G +++ +V
Sbjct: 89  TTHSHNAIHFFKRM-QLAHRPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYV 147

Query: 385 SNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI---- 440
            N+L+ +Y    +IE +  LF E  + N V+WN++I  +V  G   +A++LF+ M+    
Sbjct: 148 RNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQH 207

Query: 441 -GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK--TRYNNDIAVANALIDMYAKCG 497
            G ++QP   T    L AC    +LD G +VHS        +   I+V NAL+DMYAKCG
Sbjct: 208 NGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCG 267

Query: 498 RINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC-KPNKLTFVGVL 556
            + +A  TF  M ++  VSWN MI G++ HG   EAL LF +M   N  +P+++TF+ VL
Sbjct: 268 AVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVL 327

Query: 557 SACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPS 616
            ACS+ GL+D+G+  F+ M++DYNI+P I+HY CMV LLGR G F EA +LI  +P + +
Sbjct: 328 CACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECN 387

Query: 617 VMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKN 676
            ++WR LL AC    N++LG    +H++E++P     +VLL+NMYA   +W+ ++  R++
Sbjct: 388 AIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRS 447

Query: 677 MKRKGVKK-EPGLSWV 691
           M+ + V+K EPG S++
Sbjct: 448 MQERRVRKPEPGNSFI 463



 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 211/454 (46%), Gaps = 55/454 (12%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA ++  G   +  +   +I   +V  N++ A  VFD I   D   W  M+  +  +  
Sbjct: 31  IHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNSTT 90

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           +  +   F +   + +RP+N+T +  LK    L    +GK +H    K  ++   YV   
Sbjct: 91  HSHNAIHFFKRMQLAHRPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNS 150

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS----- 341
           L+ +Y    DI  A   FEEM + +++ W+ +I  +    +  EA++LF  M Q      
Sbjct: 151 LIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGM 210

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS---NVFVSNALMDVYAKCGEI 398
            + P++ T    L AC A   L  G+++HS V + G++S   ++ V NAL+D+YAKCG +
Sbjct: 211 ELQPDHATLVVTLSACGAIGSLDFGRKVHSFV-RDGVNSFGESISVFNALVDMYAKCGAV 269

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ-PTEVTFSSVLRA 457
           E +   F     +N V+WN MI+G+   G+GE+A+ LF+ M+  +++ P E+TF  VL A
Sbjct: 270 EEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCA 329

Query: 458 CAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEV 515
           C+    +D G +   + +   YN    + +   ++D+  +                    
Sbjct: 330 CSHGGLVDEGRRYFEI-MNRDYNIKPTIKHYGCMVDLLGRA------------------- 369

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
                       GL  EA  L   M     + N + +  +L+AC N G ++ G+ + K +
Sbjct: 370 ------------GLFVEAYELIKSMP---VECNAIIWRTLLAACRNYGNVELGEKVRKHL 414

Query: 576 SQDYNIEPCIEH---YTCMVGLLGRLGKFDEAVK 606
            +   +EP  +H   Y  +  +    G+++E  K
Sbjct: 415 ME---LEP--DHSSDYVLLANMYASTGQWNEMSK 443



 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 187/389 (48%), Gaps = 27/389 (6%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-----LDDASKLFDEMPLTNTISFVT 115
           N  KQ+H  I   G     F HN++L+  +   C     ++ A  +FD++P  ++  + T
Sbjct: 26  NHLKQIHARIFLTG-----FNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNT 80

Query: 116 LAQGCSRSHQFDH-ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKR 174
           + +G   S    H A+H   R+ +  H  + F  + I+K++  +   ++   +H  ++K 
Sbjct: 81  MIRGFGNSTTHSHNAIHFFKRM-QLAHRPDNFTFSFILKIIARLRFVNLGKQLHCSLFKF 139

Query: 175 GHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLF 234
           G +   +V  SLI  Y +  +++ A Q+F+ ++  ++VSW  ++ C+     Y E++ LF
Sbjct: 140 GFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLF 199

Query: 235 CQM-----RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC--YDQDLYVGTEL 287
            +M       M  +P++ T+   L +C  + +   G+ VH         + + + V   L
Sbjct: 200 TKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNAL 259

Query: 288 LELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV-VPN 346
           +++YAK G + +A   F  M +K+V+ W++MI  +A     +EAL LF  M   +V  P+
Sbjct: 260 VDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPD 319

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILF 405
             TF  VL AC+   L+  G++    + +   +   +     ++D+  + G    +  L 
Sbjct: 320 EITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELI 379

Query: 406 MESP-EQNEVTWNTMIV-----GYVQLGD 428
              P E N + W T++      G V+LG+
Sbjct: 380 KSMPVECNAIIWRTLLAACRNYGNVELGE 408



 Score = 77.4 bits (189), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 24/295 (8%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+ +++ +L+   + R  N GKQLHC + K G     +  N L++ Y     ++ A +LF
Sbjct: 109 DNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLF 168

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGH---EVNPFVCTTIIKL----- 154
           +EM   N +S+ ++        +++ A+ +  ++ ++ H   E+ P   T ++ L     
Sbjct: 169 EEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGA 228

Query: 155 LVSMDLPH-VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS 213
           + S+D    V   +   V   G     F   +L+D Y+ CG V+ A + F  +  K++VS
Sbjct: 229 IGSLDFGRKVHSFVRDGVNSFGESISVF--NALVDMYAKCGAVEEAYETFSNMKRKNVVS 286

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGY-RPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           W  M+  +A +   EE+L LF +M      RP+  T    L +C    + G G    G  
Sbjct: 287 WNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCAC----SHG-GLVDEGRR 341

Query: 273 LKACYDQDLYVGTE------LLELYAKSGDIVDAQLFFEEMPKK-DVIPWSLMIA 320
                ++D  +         +++L  ++G  V+A    + MP + + I W  ++A
Sbjct: 342 YFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLA 396


>Medtr6g460480.1 | organelle transcript processing protein, putative
           | HC | chr6:20783537-20781756 | 20130731
          Length = 439

 Score =  304 bits (778), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/510 (36%), Positives = 269/510 (52%), Gaps = 78/510 (15%)

Query: 318 MIARYAQSDRS-KEALELFHCM-RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           MI  ++ S+ S ++++ +F  + R S   PN ++F     AC   + +  G+Q+  + +K
Sbjct: 1   MIKAHSMSNHSYRDSVAVFKLLTRDSGFFPNRYSFVFAFGACGNGLCVREGEQVFLHAVK 60

Query: 376 VGLDSNVFVSNALMDVYAKCGEIENSMIL--FMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           VGLD NVFV NAL+ ++ K G++E++  +  FME                        A+
Sbjct: 61  VGLDCNVFVVNALIGMFGKWGDVEDARKVGCFME------------------------AL 96

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
           +LF  M+ ++++P E T                G  +H    +     +  +  +LIDMY
Sbjct: 97  DLFHKMLQSEVKPNEYTM---------------GNWIHVYIRRGEIKMNDRLLASLIDMY 141

Query: 494 AKCGRINDARLTF-DKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTF 552
           AKCG I  A   F +   KR+   WNAMI G++MHG   EA+N                 
Sbjct: 142 AKCGEIESASSVFCEHKVKRKVWPWNAMIGGFAMHGKPEEAIN----------------- 184

Query: 553 VGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP 612
                          G+S F+ M  DY I P IEHY CMV LL R G   +A ++I  +P
Sbjct: 185 ---------------GKSYFELMGSDYGINPEIEHYGCMVDLLSRSGLLKDAEEMILSMP 229

Query: 613 FQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVAS 672
             P V +W ALL AC + K+++      + + E+ P+  G +VLL N+Y+ ++RW+    
Sbjct: 230 MAPDVAIWGALLNACRIYKDMERRYRIGRIIKEIDPNHIGCNVLLGNIYSTSERWNEARM 289

Query: 673 VR-KNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVP 731
           +R KN      KK PG S +E  G+ H F VGD SHP +K I + L+ +  K + AGYVP
Sbjct: 290 LREKNEINSDRKKIPGFSSIELNGIFHQFLVGDRSHPKSKEIYSFLDEMISKLKIAGYVP 349

Query: 732 DCNAVLLDVEDDE-KERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLI 790
           +   VLLD +D+E KE  L VHSE+LA+AFGL+       I I+KNLR+C DCH   K I
Sbjct: 350 ELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPICIVKNLRVCADCHHATKFI 409

Query: 791 SEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           S+V  R I+VRD  R+HHF++GVCSC DYW
Sbjct: 410 SKVYDRVIIVRDRMRYHHFKNGVCSCKDYW 439



 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 135/323 (41%), Gaps = 76/323 (23%)

Query: 224 NCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           N  Y +S+ +F  + R  G+ PN Y+   A  +C        G+ V   A+K   D +++
Sbjct: 9   NHSYRDSVAVFKLLTRDSGFFPNRYSFVFAFGACGNGLCVREGEQVFLHAVKVGLDCNVF 68

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
           V   L+ ++ K GD+ DA+     M                      EAL+LFH M QS 
Sbjct: 69  VVNALIGMFGKWGDVEDARKVGCFM----------------------EALDLFHKMLQSE 106

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           V PN +T               +G  IH  + +  +  N  +  +L+D+YAKCGEIE++ 
Sbjct: 107 VKPNEYT---------------MGNWIHVYIRRGEIKMNDRLLASLIDMYAKCGEIESAS 151

Query: 403 ILFMESPEQNEV-TWNTMIVGYVQLGDGEKAMN--LFSSMIGND---------------- 443
            +F E   + +V  WN MI G+   G  E+A+N   +  ++G+D                
Sbjct: 152 SVFCEHKVKRKVWPWNAMIGGFAMHGKPEEAINGKSYFELMGSDYGINPEIEHYGCMVDL 211

Query: 444 ------------------MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAV 485
                             M P    + ++L AC  +  ++   ++  + IK    N I  
Sbjct: 212 LSRSGLLKDAEEMILSMPMAPDVAIWGALLNACRIYKDMERRYRIGRI-IKEIDPNHIGC 270

Query: 486 ANALIDMYAKCGRINDARLTFDK 508
              L ++Y+   R N+AR+  +K
Sbjct: 271 NVLLGNIYSTSERWNEARMLREK 293


>Medtr8g068150.1 | SLOW growth protein, putative | HC |
           chr8:28404022-28408146 | 20130731
          Length = 633

 Score =  303 bits (777), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 189/563 (33%), Positives = 290/563 (51%), Gaps = 44/563 (7%)

Query: 202 VFDGIFCKDMVSWTGMVGCYAE-NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLG-- 258
           +F  I   D+  W  ++  Y++ +   +    LF  M      P+++T    LK+C    
Sbjct: 71  LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVL 130

Query: 259 LEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLM 318
           + A   G  VH   L+  +  D++V   LL  Y   GD+V+A   F+E   +D + ++ M
Sbjct: 131 ISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTM 190

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VG 377
           I  +A+         +F  MR   V P+ +TF ++L  C+      +G+Q+H  V + +G
Sbjct: 191 INGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELG 250

Query: 378 -LDSNVFVSNALMDVYAKCG---------------------------------EIENSMI 403
               NV + N L+D+YAKCG                                 E++ +  
Sbjct: 251 CFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARR 310

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           LF +  E++ V+W  MI GY   G  ++A+ LF  + G  M+P EV   + L ACA   A
Sbjct: 311 LFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGA 370

Query: 464 LDPGLQVHSLTIKTRYNNDI--AVANALIDMYAKCGRINDARLTFDKM--DKREEVSWNA 519
           L+ G ++H       +   I     +A++DMYAKCG I+ A   F K   DK+    +N+
Sbjct: 371 LELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNS 430

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           +I G + HG    A NLF +M     KP+ +TFV VLSAC + GL+D G+ LF+SM   Y
Sbjct: 431 IISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVY 490

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFC 639
            + P +EHY CMV LLGR G  DEA +LI ++PF+ + ++WRALL AC V  ++ L R  
Sbjct: 491 GVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVA 550

Query: 640 AQHVLEMKPHDDGT-HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVH 698
           +  ++E++ HD G  +V+LSNM +   + D  AS+RK +   G++K PG S+VE    +H
Sbjct: 551 SYELVELQ-HDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLH 609

Query: 699 YFSVGDTSHPDNKLICAMLEWLN 721
            F  GD SHP+ K    ML  +N
Sbjct: 610 KFLAGDKSHPEAKTTELMLRDIN 632



 Score =  174 bits (441), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 188/389 (48%), Gaps = 52/389 (13%)

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL-- 302
           +N  I + L SC  ++       ++   +      +L++ T L   YA S          
Sbjct: 13  SNERIKSLLSSCKTMQQ---AHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSH 69

Query: 303 -FFEEMPKKDVIPWSLMIARYAQ-SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
             F ++   D+  W+ +I  Y+Q     +    LF  M  SSV+P++FTF  +L+ACA  
Sbjct: 70  TLFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANV 129

Query: 361 VLLI--LGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
           ++     G Q+H +VL+ G  S+VFV+NAL++ Y   G++ N+  +F ES  ++ V++NT
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
           MI G+ + GD      +F  M G  ++P E TF ++L  C+       G QVH L  +  
Sbjct: 190 MINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYREL 249

Query: 479 --YNNDIAVANALIDMYAKCGR---------------------------------INDAR 503
             +  ++ + N L+DMYAKCGR                                 +  AR
Sbjct: 250 GCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVAR 309

Query: 504 LTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAG 563
             FD+M +R+ VSW AMI GYS  G   EAL LF K++    KP+++  V  LSAC+  G
Sbjct: 310 RLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLG 369

Query: 564 LLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
            L+ G+ + +  +         E++TC +
Sbjct: 370 ALELGRRIHRQYAG--------ENWTCSI 390



 Score =  170 bits (431), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 205/425 (48%), Gaps = 43/425 (10%)

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD 204
           PF+      +L+S   P   + +H  V + G  +D FV  +L++ Y   G+V  A +VFD
Sbjct: 120 PFLLKACANVLISA--PQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFD 177

Query: 205 GIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV 264
             F +D VS+  M+  +A         ++F +MR +  RP+ YT  A L  C  LE + +
Sbjct: 178 ESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRI 237

Query: 265 GKSVHGCALK--ACYDQDLYVGTELLELYAKSGDIVDAQL-------------------- 302
           G+ VHG   +   C+  ++ +  +L+++YAK G +V A+                     
Sbjct: 238 GRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVS 297

Query: 303 -------------FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
                         F++M ++DV+ W+ MI+ Y+ +   +EALELF  +    + P+   
Sbjct: 298 AYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVA 357

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNV--FVSNALMDVYAKCGEIENSMILFME 407
             + L ACA    L LG++IH          ++    ++A++D+YAKCG I+ ++ +F +
Sbjct: 358 VVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRK 417

Query: 408 SPEQNEVT--WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
           + +  + T  +N++I G    G GE A NLF  M    ++P  +TF +VL AC     +D
Sbjct: 418 TSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVD 477

Query: 466 PGLQV-HSLTIKTRYNNDIAVANALIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICG 523
            G ++  S+      + ++     ++D+  + G +++A RL      K   V W A++  
Sbjct: 478 FGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSA 537

Query: 524 YSMHG 528
             +HG
Sbjct: 538 CKVHG 542



 Score =  140 bits (354), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 199/422 (47%), Gaps = 45/422 (10%)

Query: 43  DSHSYAALLQQA--IQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           DS ++  LL+    +    P  G Q+HC +L+ G   D+F +N LLNFY  F  + +A K
Sbjct: 115 DSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYK 174

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHV------------------------ILRL 136
           +FDE  + + +SF T+  G +R         V                        +L  
Sbjct: 175 VFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLED 234

Query: 137 FKEGHEVNPFV-----CTTIIKLLVS--MDLPHVCWTIHAC-----VYKRGHQADAFVGT 184
           ++ G +V+  V     C     LLV+  +D+   C  +        V K G    A   T
Sbjct: 235 YRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVA-AWT 293

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           SL+ AY++ G V  AR++FD +  +D+VSWT M+  Y+    ++E+L+LF ++  +G +P
Sbjct: 294 SLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKP 353

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVG--TELLELYAKSGDIVDAQL 302
           +   + AAL +C  L A  +G+ +H       +   +  G  + ++++YAK G I  A  
Sbjct: 354 DEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALD 413

Query: 303 FFEEMP--KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
            F +    KK    ++ +I+  A   R + A  LF  M    + P+N TF +VL AC   
Sbjct: 414 VFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHC 473

Query: 361 VLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNT 418
            L+  GK++  ++  V G+   +     ++D+  + G ++ +  L ++ P + N V W  
Sbjct: 474 GLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRA 533

Query: 419 MI 420
           ++
Sbjct: 534 LL 535


>Medtr1g038860.1 | PPR containing plant-like protein | LC |
           chr1:14313044-14316621 | 20130731
          Length = 625

 Score =  303 bits (775), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 192/575 (33%), Positives = 311/575 (54%), Gaps = 21/575 (3%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFC-KDMVSWTGMVGCYAENCFYEE 229
           V+    + D+ + T++I  Y  CG ++ AR++FD     K ++ WT MV  Y +    EE
Sbjct: 67  VFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEE 126

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
           + +LF +M V      N  I    ++    EA  +             ++++     ++ 
Sbjct: 127 AERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDL--------FGRMPERNVVSWNTVMT 178

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
             A  G I DA+  F EM ++DV+ W+ M+A  +++ R   A E+F  M   +VV  N  
Sbjct: 179 ALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAM 238

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
            A   Q       L L +++         + ++   N ++  + + G++  +  LF   P
Sbjct: 239 IAGYAQNGRFDEALKLFERMP--------ERDMPSWNTMVTGFIQNGDLNRAEQLFHAMP 290

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGFAALDPGL 468
           ++N +TW  M+ GYVQ G  E+A+ LF+ M  ND ++PT  TF +VL AC+  A L  G 
Sbjct: 291 QKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQ 350

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK--MDKREEVSWNAMICGYSM 526
           Q+H +  KT +     V +ALI+MY+KCG  + A+  FD       + ++WN MI  Y+ 
Sbjct: 351 QIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAH 410

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           HG   EA+NLFNKMQ+   + N +T+VG+L+ACS+AGL D+G   F  + ++  I+   +
Sbjct: 411 HGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVRED 470

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HYTC++ L GR G+ DEA+ +I  +  + S+ +W ALL  C V  N D+G+  A  VL+M
Sbjct: 471 HYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKM 530

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
           +P +  T++L SNMYA     +  A+VR  MK+KG+KK+PG SW++    V  F V D S
Sbjct: 531 EPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKS 590

Query: 707 HPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVE 741
           H   +++  +L  L+ K +    + D + +L+DVE
Sbjct: 591 HSQFEMLKYLLLDLHTKMKKNRDMSD-DDLLVDVE 624



 Score =  189 bits (479), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 222/454 (48%), Gaps = 62/454 (13%)

Query: 85  LLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVN 144
           +++ Y++ + +++A +LF+EMP+ N +S+ T+  G +R+ +   AL     LF    E N
Sbjct: 114 MVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALD----LFGRMPERN 169

Query: 145 PFVCTTIIKLLVSMDLPHVCWTIHAC--VYKRGHQADAFVGTSLIDAYSVCGNVDAARQV 202
                T++  L        C  I     ++    + D    T+++   S  G VDAAR+V
Sbjct: 170 VVSWNTVMTALAH------CGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREV 223

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAF 262
           FD +  +++VSW  M+  YA+N  ++E+L+LF +M                         
Sbjct: 224 FDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMP------------------------ 259

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
                          ++D+     ++  + ++GD+  A+  F  MP+K+VI W+ M+  Y
Sbjct: 260 ---------------ERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGY 304

Query: 323 AQSDRSKEALELFHCMR-QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
            Q   S+EAL+LF+ M+    + P   TF +VL AC+    L  G+QIH  + K     +
Sbjct: 305 VQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQES 364

Query: 382 VFVSNALMDVYAKCGEIENSMILFME--SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
            +V +AL+++Y+KCG+   +  +F +  S   + + WN MI  Y   G G +A+NLF+ M
Sbjct: 365 TYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKM 424

Query: 440 IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA----NALIDMYAK 495
                Q  +VT+  +L AC+     D G +     +K RY   I V       LID+  +
Sbjct: 425 QELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRY---IQVREDHYTCLIDLCGR 481

Query: 496 CGRINDARLTFDKMDKREEVS-WNAMICGYSMHG 528
            GR+++A    + + K   +S W A++ G S+HG
Sbjct: 482 AGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHG 515



 Score = 85.9 bits (211), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 15/289 (5%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           P  +  S+ A++    QN   +   +L     +R    D+ + N ++  ++Q   L+ A 
Sbjct: 228 PIRNVVSWNAMIAGYAQNGRFDEALKL----FERMPERDMPSWNTMVTGFIQNGDLNRAE 283

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMD 159
           +LF  MP  N I++  +  G  +    + AL +  ++ +    + P   T +  L    D
Sbjct: 284 QLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKM-QANDGLKPTTGTFVTVLGACSD 342

Query: 160 LPHV--CWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK--DMVSWT 215
           L  +     IH  + K   Q   +V ++LI+ YS CG+   A+++FD       D+++W 
Sbjct: 343 LAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWN 402

Query: 216 GMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA 275
           GM+  YA + +  E++ LF +M+ +G++ N+ T    L +C     F  G       LK 
Sbjct: 403 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKN 462

Query: 276 CYDQ---DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP-WSLMIA 320
            Y Q   D Y  T L++L  ++G + +A    E + K+  +  W  ++A
Sbjct: 463 RYIQVREDHY--TCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLA 509



 Score = 83.6 bits (205), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 54/257 (21%)

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G++  +  +F E  +++   W TMI GY++ G   +A  LF                   
Sbjct: 59  GKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDR----------------- 101

Query: 456 RACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEV 515
                     P  Q             + V  A++  Y K  RI +A   F++M  R  V
Sbjct: 102 ----------PDAQ-----------KSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVV 140

Query: 516 SWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           SWN MI GY+ +G + EAL+LF +M + N     +++  V++A ++ G +D  + LF  M
Sbjct: 141 SWNTMIDGYARNGRTQEALDLFGRMPERNV----VSWNTVMTALAHCGRIDDAERLFNEM 196

Query: 576 SQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDL 635
                 E  +  +T MV  L + G+ D A ++  ++P + +V+ W A++           
Sbjct: 197 R-----ERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIR-NVVSWNAMIAGYAQN----- 245

Query: 636 GRFC-AQHVLEMKPHDD 651
           GRF  A  + E  P  D
Sbjct: 246 GRFDEALKLFERMPERD 262



 Score = 60.5 bits (145), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 10/159 (6%)

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
           L++ S +  T   +++   N  I    + G++N+AR  FD+M KR+   W  MI GY   
Sbjct: 31  LRIRSSSTAT-LTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKC 89

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           GL  EA  LF++    + + + + +  ++S       +++ + LF  M         +  
Sbjct: 90  GLINEARKLFDR---PDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPV-----RNVVS 141

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           +  M+    R G+  EA+ L G +P + +V+ W  ++ A
Sbjct: 142 WNTMIDGYARNGRTQEALDLFGRMP-ERNVVSWNTVMTA 179


>Medtr3g011920.1 | PPR containing plant-like protein | HC |
           chr3:3106602-3104668 | 20130731
          Length = 627

 Score =  301 bits (772), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 162/435 (37%), Positives = 247/435 (56%), Gaps = 36/435 (8%)

Query: 304 FEEMPKKDVIPW-SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
           F+EMP+   +   + +I  +++  R ++A+ LF  M  S++ PN FTF +VL        
Sbjct: 116 FDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGK 175

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAK---------------------------- 394
           + +GKQIH   +K  L SNVFV +AL+D+Y K                            
Sbjct: 176 VGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGG 235

Query: 395 ---CGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTF 451
               G  E+++ +F E PE+N ++WN M+ G  ++G  E+A+  F  M+     P E TF
Sbjct: 236 YLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTF 295

Query: 452 SSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK 511
              + A +  A+L  G   H+  IK     +  V N+LI  YAKCG + D+ L FDK+ K
Sbjct: 296 PCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICK 355

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           R  VSWNA+ICGY+ +G   EA++LF +M     KPNK++ +G+L AC++AGL+D+G   
Sbjct: 356 RNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLY 415

Query: 572 F-KSMSQDYN-IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVV 629
           F K+  +  N ++P  EHY CMV LL R G+F EA   I  +PF P +  W+A+LG C +
Sbjct: 416 FNKARIESPNLLKP--EHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQI 473

Query: 630 QKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
             NI+LG   A+++L + P D  ++V++SN ++ A RW +VA +R  ++ KG+K+ PG S
Sbjct: 474 HHNIELGELAAKNILALDPDDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSS 533

Query: 690 WVENQGVVHYFSVGD 704
           W+E +G VH F   D
Sbjct: 534 WIEVKGKVHAFLKAD 548



 Score =  162 bits (411), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 189/413 (45%), Gaps = 34/413 (8%)

Query: 149 TTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFC 208
           T I  ++     PH  +  +       H    F+ T      S     D A  +FD +  
Sbjct: 62  TPIKNIISRFSTPHFPFCTYQTKTHHSHDKTNFLHTGFQPNGSDSITFDVACNMFDEMPE 121

Query: 209 KDMVSW-TGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKS 267
              V   T ++  +++   +E+++ LF +M     RPN +T    L +   L   GVGK 
Sbjct: 122 LLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQ 181

Query: 268 VHGCALKACYDQDLYVGTELLELYAK-------------------------------SGD 296
           +HGCA+K     +++VG+ L++LY K                               SG 
Sbjct: 182 IHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGR 241

Query: 297 IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA 356
             DA   F EMP+++VI W+ M+   ++   ++EA++ F  M +   +PN  TF   + A
Sbjct: 242 FEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISA 301

Query: 357 CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTW 416
            +    L  G+  H+  +K     N FV N+L+  YAKCG +++S+++F +  ++N V+W
Sbjct: 302 ASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSW 361

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG-LQVHSLTI 475
           N +I GY   G G +A++LF  M    ++P +V+   +L AC     +D G L  +   I
Sbjct: 362 NAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARI 421

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
           ++           ++D+ A+ GR  +A+    +M     +  W A++ G  +H
Sbjct: 422 ESPNLLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIH 474



 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 32/295 (10%)

Query: 95  LDDASKLFDEMPLTNTISFVT-LAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK 153
            D A  +FDEMP   T+  VT +    S+  + + A+++  R+       N F   T++ 
Sbjct: 109 FDVACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLN 168

Query: 154 LLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVS 213
               +    V   IH C  K    ++ FVG++L+D Y    +++ A++ F+     ++VS
Sbjct: 169 TSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVS 228

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVM-------------------------------GY 242
           +T ++G Y ++  +E++L++F +M                                  G+
Sbjct: 229 YTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGF 288

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQL 302
            PN  T   A+ +   + + G G+S H CA+K     + +VG  L+  YAK G + D+ L
Sbjct: 289 IPNESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLL 348

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
            F+++ K++V+ W+ +I  YA + R  EA+ LF  M    + PN  +   +L AC
Sbjct: 349 IFDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLAC 403



 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 21/242 (8%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           ++ ++  L+  Y++    +DA ++F+EMP  N IS+  +  GCS+    + A+   + + 
Sbjct: 225 NVVSYTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDML 284

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVD 197
           +EG   N       I    ++       + HAC  K   + + FVG SLI  Y+ CG++ 
Sbjct: 285 REGFIPNESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMK 344

Query: 198 AARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC- 256
            +  +FD I  +++VSW  ++  YA N    E++ LF +M   G +PN  ++   L +C 
Sbjct: 345 DSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACN 404

Query: 257 ------LGLEAFGVGKSVHGCALK----ACYDQDLYVGTELLELYAKSGDIVDAQLFFEE 306
                  G   F   +      LK    AC          +++L A+SG   +AQ F   
Sbjct: 405 HAGLVDEGFLYFNKARIESPNLLKPEHYAC----------MVDLLARSGRFTEAQNFIRR 454

Query: 307 MP 308
           MP
Sbjct: 455 MP 456


>Medtr8g027150.1 | PPR containing plant-like protein | HC |
           chr8:9538952-9542067 | 20130731
          Length = 506

 Score =  301 bits (771), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 171/486 (35%), Positives = 268/486 (55%), Gaps = 42/486 (8%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS 325
           K  HG  L+   D    +  +LL++     ++  AQ+      K    P + +  +  Q+
Sbjct: 5   KQFHGYTLRNNIDNTKILIEKLLQI----PNLNYAQVLLHHSQK----PTTFLYNKLIQA 56

Query: 326 DRSK-EALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFV 384
             SK +   L+  M      PN +TF  +   C +   L LG+ IH+  +K G   +VF 
Sbjct: 57  CSSKHQCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFA 116

Query: 385 SNALMDVYAKCG-------------------------------EIENSMILFMESPEQNE 413
           S AL+D+YAK G                               ++E ++ LF   P +N 
Sbjct: 117 STALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNV 176

Query: 414 VTWNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
           V+W TM+ GY+Q    EKA+ LF  M    D+ P EVT +SVL ACA   AL+ G +V  
Sbjct: 177 VSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEV 236

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK-REEVSWNAMICGYSMHGLST 531
              K  +  ++ V NA+++MYAKCG+I+ A   FD++ + R   SWN+MI G ++HG   
Sbjct: 237 YARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCH 296

Query: 532 EALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCM 591
           +A+ L+++M +    P+ +TFVG+L AC++ G+++KG+ +F+SM++D+NI P +EHY CM
Sbjct: 297 KAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCM 356

Query: 592 VGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDD 651
           V LLGR G+  EA ++I  +P +P  ++W  LLGAC    N++L    A+ +  ++P + 
Sbjct: 357 VDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNP 416

Query: 652 GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNK 711
           G +V+LSN+YA A +WD VA +RK MK   + K  G S++E  G +H F V D SH ++ 
Sbjct: 417 GNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESS 476

Query: 712 LICAML 717
            I A+L
Sbjct: 477 EIFALL 482



 Score =  155 bits (392), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 163/331 (49%), Gaps = 35/331 (10%)

Query: 233 LFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYA 292
           L+ QM + G+ PN YT      +C  L +  +G+ +H   +K+ +  D++  T LL++YA
Sbjct: 66  LYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYA 125

Query: 293 KSGDIVDAQLFFEE-------------------------------MPKKDVIPWSLMIAR 321
           K G +  A+  F+E                               MP ++V+ W+ M++ 
Sbjct: 126 KLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSG 185

Query: 322 YAQSDRSKEALELFHCM-RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS 380
           Y Q+ + ++AL LF  M R+  V PN  T ASVL ACA    L +G+++     K G   
Sbjct: 186 YLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFK 245

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPE-QNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
           N+FV NA++++YAKCG+I+ +  +F E    +N  +WN+MI+G    G   KA+ L+  M
Sbjct: 246 NLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQM 305

Query: 440 IGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTIKTRYNNDIAVANALIDMYAKCGR 498
           +     P +VTF  +L AC     ++ G  V  S+T        +     ++D+  + GR
Sbjct: 306 LREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGR 365

Query: 499 INDARLTFDKMD-KREEVSWNAMICGYSMHG 528
           + +A     +M  K + V W  ++   S HG
Sbjct: 366 LTEAYEVIKRMPMKPDSVIWGTLLGACSFHG 396



 Score =  121 bits (303), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 210/492 (42%), Gaps = 71/492 (14%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           N  KQ H   L+     ++    IL+   +Q   L+ A  L        T  +  L Q C
Sbjct: 2   NQVKQFHGYTLRN----NIDNTKILIEKLLQIPNLNYAQVLLHHSQKPTTFLYNKLIQAC 57

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
           S  HQ      +  +++  GH  N +    +     S+    +   IH    K G + D 
Sbjct: 58  SSKHQ---CFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDV 114

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDM----------------------------- 211
           F  T+L+D Y+  G +  AR VFD +  K++                             
Sbjct: 115 FASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSR 174

Query: 212 --VSWTGMVGCYAENCFYEESLQLFCQM-RVMGYRPNNYTITAALKSCLGLEAFGVGKSV 268
             VSWT MV  Y +N  YE++L LF +M R     PN  T+ + L +C  L A  +G+ V
Sbjct: 175 NVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRV 234

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK-KDVIPWSLMIARYAQSDR 327
              A K  + ++L+V   +LE+YAK G I  A   F+E+ + +++  W+ MI   A   +
Sbjct: 235 EVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQ 294

Query: 328 SKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS-- 385
             +A++L+  M +   +P++ TF  +L AC    ++  GK +  ++ +   D N+     
Sbjct: 295 CHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTR---DFNIIPKLE 351

Query: 386 --NALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIV-----GYVQL----------- 426
               ++D+  + G +  +  +    P + + V W T++      G V+L           
Sbjct: 352 HYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVL 411

Query: 427 -----GDGEKAMNLFSSMIGND--MQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
                G+     N+++S    D   +  +V   S +   AG + ++ G Q+H   ++ R 
Sbjct: 412 EPWNPGNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRS 471

Query: 480 NNDIAVANALID 491
           +++ +   AL++
Sbjct: 472 HSESSEIFALLN 483


>Medtr8g074780.1 | PPR containing plant-like protein | HC |
           chr8:31617312-31615266 | 20130731
          Length = 510

 Score =  300 bits (768), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 167/476 (35%), Positives = 270/476 (56%), Gaps = 6/476 (1%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKSG--DIVDAQLFFEEMPKKDVIPWSLMIARYA 323
           K  H   +   + QD ++  +L++ Y++ G  ++  A+  F+++ ++DV  W+ +I  YA
Sbjct: 37  KQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYA 96

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
                 EAL +++ MR S   PN +T+  VL+AC A+   + G+ IH NV+K GL+ ++F
Sbjct: 97  NMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLF 156

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
           V NA +  YAKC EIE S  +F E  E++ V+WN+M+ GY+  G  ++A+ LF  M+ +D
Sbjct: 157 VGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDD 216

Query: 444 MQ--PTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIND 501
               P   T  +VL A A  A +  G  +H   +KT    D AV   LI +Y+ CG I  
Sbjct: 217 GIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRM 276

Query: 502 ARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           A+  FD++  R  + W+A+I  Y MHG + EAL++F ++ +     + + F+ +LSACS+
Sbjct: 277 AKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSH 336

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
           AG+ ++G  LF++M + Y +     HY CMV LLGR G  ++A++LI  +P QP   V+ 
Sbjct: 337 AGMHEEGWHLFQTM-ETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYG 395

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           ALLGA  + KNI+L    A+ +  + P++ G +V+L+ MY    RW + A +RK ++ K 
Sbjct: 396 ALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRKIIREKE 455

Query: 682 VKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVL 737
           +KK  G S VE +     F V D +HP    I   L  L +      +   C+A++
Sbjct: 456 IKKPIGYSSVELESGHKKFGVNDETHPLTTEIFETLVSLGRTMGKEAHT-QCDAIM 510



 Score =  129 bits (323), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 6/353 (1%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDC--LDDASKLFDEMPLTNTISFVTLAQGCS 121
           KQ H  I+  G   D F    L++ Y Q     ++ A K+FD++   +   +  + +G +
Sbjct: 37  KQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYA 96

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
               F  ALHV   +   G   N +    ++K   +         IH  V K G + D F
Sbjct: 97  NMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLF 156

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM---R 238
           VG + +  Y+ C  ++A+R+VFD +  +D+VSW  M+  Y  N + +E++ LFC M    
Sbjct: 157 VGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDD 216

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
            +G+ P+N T+   L +         G  +H   +K     D  VG  L+ LY+  G I 
Sbjct: 217 GIGF-PDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIR 275

Query: 299 DAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
            A+  F+++P ++VI WS +I  Y     ++EAL +F  + +  +  +   F S+L AC+
Sbjct: 276 MAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACS 335

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
              +   G  +   +   G+         ++D+  + G +E +M L    P Q
Sbjct: 336 HAGMHEEGWHLFQTMETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQ 388



 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 35/323 (10%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           + ++Y  +L+     R    G+ +H +++K G   DLF  N  + FY +   ++ + K+F
Sbjct: 119 NRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVF 178

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKE---GHEVNPFVCTTIIKLLVSMD 159
           DEM   + +S+ ++  G   +   D A+ +   + ++   G   N  + T +       D
Sbjct: 179 DEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKAD 238

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVG 219
           + H  + IH  + K G + D  VG  LI  YS CG +  A+ VFD I  ++++ W+ ++ 
Sbjct: 239 I-HAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIR 297

Query: 220 CYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC-------------LGLEAFGVGK 266
           CY  + F +E+L +F Q+  +G   +     + L +C               +E +GV  
Sbjct: 298 CYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTMETYGV-- 355

Query: 267 SVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSD 326
            V G A  AC          +++L  ++G++  A    + MP   + P   +      + 
Sbjct: 356 -VKGEAHYAC----------MVDLLGRAGNLEKAMELIQSMP---IQPGKNVYGALLGAS 401

Query: 327 RSKEALELFHCMRQSSVV--PNN 347
           R  + +EL     +   V  PNN
Sbjct: 402 RIHKNIELAELAAEKLFVLDPNN 424


>Medtr2g087120.1 | PPR containing plant-like protein | HC |
           chr2:36618951-36617398 | 20130731
          Length = 517

 Score =  299 bits (765), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 162/466 (34%), Positives = 263/466 (56%), Gaps = 35/466 (7%)

Query: 312 VIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA---AQVLLILGKQ 368
            + W+  I+ + +++   +A   F  M ++ V PN+ T  ++L ACA   ++  +  G  
Sbjct: 52  TVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAA 111

Query: 369 IHSNVLKVGLDSN-VFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           +H++  K G   N V V  AL+D+YAKCG+++ + ++F +   +N V+WNTMI GY++ G
Sbjct: 112 LHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNG 171

Query: 428 DGEKAMNLFSSM-----------IGN---------------DMQ-----PTEVTFSSVLR 456
           D + A+ LF  +           IG                +MQ     P  VT  +++ 
Sbjct: 172 DVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIIS 231

Query: 457 ACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS 516
           ACA   AL  GL VH L +K  + +++ V N+LIDMYA+CG I  AR  FD M +R  VS
Sbjct: 232 ACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVS 291

Query: 517 WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMS 576
           WN++I G++++GL+ +AL+ F  M++   +PN +++   L+ACS+AGL+D+G  +F  + 
Sbjct: 292 WNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIK 351

Query: 577 QDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLG 636
           +D+   P IEHY C+V L  R G+  EA  +I ++P  P+ +V  +LL AC  Q +++L 
Sbjct: 352 RDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELA 411

Query: 637 RFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGV 696
               ++ +E+ P  D  +VL SN+YA   +WD  + VR+ MK +G++K    S +E    
Sbjct: 412 EKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSG 471

Query: 697 VHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVED 742
           +H F  GD  H +N  I + LE L+ +    GYVPD +    DV+D
Sbjct: 472 IHKFVSGDKYHEENDYIYSALELLSFELHLYGYVPDFSGKESDVDD 517



 Score =  129 bits (325), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 170/333 (51%), Gaps = 16/333 (4%)

Query: 109 NTISFVTLAQGCSRSHQ-----FDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV 163
           N I+ +TL   C+ S       F  ALH     FK G  +N  +  T +     +D+   
Sbjct: 86  NHITLITLLSACAHSPSKTSITFGAALHT--HAFKHGFAMNDVMVGTAL-----IDMYAK 138

Query: 164 CWTIHAC--VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
           C  +     V+ +    +     ++ID Y   G+VD A ++FD +  K++VSWT ++G +
Sbjct: 139 CGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGF 198

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDL 281
            +   YEE+L+ F +M++ G  P+  T+ A + +C  L A G+G  VH   +K  +  ++
Sbjct: 199 VKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNV 258

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
            V   L+++YA+ G I  A+  F+ M +++++ W+ +I  +A +  + +AL  F  M++ 
Sbjct: 259 KVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKE 318

Query: 342 SVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS-NVFVSNALMDVYAKCGEIEN 400
            + PN  ++ S L AC+   L+  G +I +++ +   +S  +     L+D+Y++ G ++ 
Sbjct: 319 GLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKE 378

Query: 401 SMILFMESPEQ-NEVTWNTMIVGYVQLGDGEKA 432
           +  +  + P   NEV   +++      GD E A
Sbjct: 379 AWDVIKKMPMMPNEVVLGSLLAACRTQGDVELA 411



 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 156/337 (46%), Gaps = 40/337 (11%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           +L + N +++ Y++   +DDA KLFD++P+ N +S+  +  G  +   ++ AL     + 
Sbjct: 156 NLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQ 215

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVD 197
             G   +      II    ++    +   +H  V K+  + +  V  SLID Y+ CG ++
Sbjct: 216 LAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIE 275

Query: 198 AARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCL 257
            ARQVFDG+  +++VSW  ++  +A N   +++L  F  M+  G  PN  + T+AL +  
Sbjct: 276 LARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTA-- 333

Query: 258 GLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSL 317
                        C+     D+ L +  ++   +  S  I                 +  
Sbjct: 334 -------------CSHAGLIDEGLKIFADIKRDHRNSPRIEH---------------YGC 365

Query: 318 MIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI--HSNVLK 375
           ++  Y+++ R KEA ++   +++  ++PN     S+L AC  Q  + L +++  +   L 
Sbjct: 366 LVDLYSRAGRLKEAWDV---IKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELY 422

Query: 376 VGLDSN-VFVSNALMDVYAKCGEIENSMILFMESPEQ 411
            G DSN V  SN    +YA  G+ + +  +  E  E+
Sbjct: 423 PGGDSNYVLFSN----IYAAVGKWDGASKVRREMKER 455



 Score = 97.4 bits (241), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 36/206 (17%)

Query: 399 ENSMILFMESPEQNE-VTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA 457
           +N  +     P  N+ V+W + I  + +  +  KA + F  M+  +++P  +T  ++L A
Sbjct: 37  KNQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSA 96

Query: 458 CA---GFAALDPGLQVHSLTIKTRYN-NDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           CA      ++  G  +H+   K  +  ND+ V  ALIDMYAKCG+++ ARL FD+M  R 
Sbjct: 97  CAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRN 156

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNK-------------------------------MQQ 542
            VSWN MI GY  +G   +AL LF+K                               MQ 
Sbjct: 157 LVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQL 216

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKG 568
               P+ +T + ++SAC+N G L  G
Sbjct: 217 AGVVPDFVTVIAIISACANLGALGLG 242


>Medtr6g093170.1 | PPR containing protein | HC |
           chr6:35177726-35180122 | 20130731
          Length = 608

 Score =  297 bits (760), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 177/521 (33%), Positives = 280/521 (53%), Gaps = 35/521 (6%)

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
           ++  + LF Q+R+ G  P+NYT    LK+   +  F  G  +H    K   D D YV   
Sbjct: 84  FQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVFKTGLDSDYYVSNS 143

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR-QSSVVP 345
            +++YA+ G I   +  F+E+ ++D + W++MI+   +  R +EA+E+F  MR  S+   
Sbjct: 144 FMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKI 203

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG------EIE 399
           +  T  S L ACAA   + +GK+IH  +++  LD  + + NAL+D+Y KCG      EI 
Sbjct: 204 SEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIF 263

Query: 400 NSMI-------------------------LFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
           + MI                         LF +SP ++ V W  MI GYVQ    ++A+ 
Sbjct: 264 DGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVA 323

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYA 494
           LF  M    ++P +    ++L  CA    L+ G  +H    + R   D  V  +LI+MYA
Sbjct: 324 LFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYA 383

Query: 495 KCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVG 554
           KCG +  +   F+ + +++  SW ++ICG +M+G + EAL LF +M+    KP+ +TF+ 
Sbjct: 384 KCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIV 443

Query: 555 VLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ 614
           +L+ACS+ GL+++G  LF SMS  Y IEP +EHY C + LLGR G   EA +LI ++P Q
Sbjct: 444 LLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIKKLPDQ 503

Query: 615 PS---VMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVA 671
            +   V ++ + L AC    N D+G   A  + ++K  D   H LL+++YA A RW++ +
Sbjct: 504 KNETIVAIYGSFLSACRTYGNTDMGERIATALEKVKSSDSSLHSLLASIYASADRWEDAS 563

Query: 672 SVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
             R  MK   ++K PG S +E  G  +   VGD S   +K+
Sbjct: 564 KTRSKMKDLHIRKVPGCSAIEVDGSGNQGGVGDFSSFRSKI 604



 Score =  163 bits (412), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 188/383 (49%), Gaps = 34/383 (8%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA V+K G  +D +V  S +D Y+  G +D  R++FD I  +D VSW  M+    +   
Sbjct: 125 IHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRR 184

Query: 227 YEESLQLFCQMRV-MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
           +EE++++F +MRV    + +  T+ ++L +C       VGK +HG  ++   D  + +G 
Sbjct: 185 FEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGN 244

Query: 286 ELLELYAKSG------DIVDAQL-------------------------FFEEMPKKDVIP 314
            LL++Y K G      +I D  +                          F++ P +DV+ 
Sbjct: 245 ALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVL 304

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           W+ MI  Y Q +R  EA+ LF  M+   V P+ F   ++L  CA    L  G+ IH  V 
Sbjct: 305 WTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVR 364

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
           +  +  +  V  +L+++YAKCG +E S+ +F    E++  +W ++I G    G   +A+ 
Sbjct: 365 ENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALE 424

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV-HSLTIKTRYNNDIAVANALIDMY 493
           LF  M     +P +VTF  +L AC+    ++ G ++ HS++       ++      ID+ 
Sbjct: 425 LFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLL 484

Query: 494 AKCGRINDARLTFDKM-DKREEV 515
            + G +++A     K+ D++ E 
Sbjct: 485 GRAGLLHEAEELIKKLPDQKNET 507



 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 191/379 (50%), Gaps = 37/379 (9%)

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           ++L+I  + + +  +  + LF+ +R + + P+N+T+  VL+A A       G +IH+ V 
Sbjct: 71  YNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVF 130

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
           K GLDS+ +VSN+ MD+YA+ G I+    LF E  E++ V+WN MI G V+    E+A+ 
Sbjct: 131 KTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVE 190

Query: 435 LFSSM-IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
           +F  M + ++ + +E T  S L ACA    ++ G ++H   I+   +  + + NAL+DMY
Sbjct: 191 VFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMY 250

Query: 494 AKCGRINDARLTFDKM---------------------DK----------REEVSWNAMIC 522
            KCG ++ AR  FD M                     DK          R+ V W AMI 
Sbjct: 251 CKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMIN 310

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
           GY       EA+ LF +MQ    KP+K   V +L+ C+  G L+ G+ +   + ++  + 
Sbjct: 311 GYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVV 370

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL-GACVVQKNID-LGRFCA 640
             +   T ++ +  + G  ++++++   +  +     W +++ G  +  K I+ L  F  
Sbjct: 371 DAVVG-TSLIEMYAKCGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTIEALELFEE 428

Query: 641 QHVLEMKPHDDGTHVLLSN 659
             +   KP DD T ++L N
Sbjct: 429 MKIFGAKP-DDVTFIVLLN 446



 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 186/407 (45%), Gaps = 35/407 (8%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D+++Y  +L+          G ++H  + K G   D +  N  ++ Y +   +D   KLF
Sbjct: 102 DNYTYPFVLKAVAFIADFRQGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLF 161

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE--VNPFVCTTIIKLLVSMDL 160
           DE+   +++S+  +  GC +  +F+ A+ V  R+  + +E      V +++     S ++
Sbjct: 162 DEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNV 221

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIF------------- 207
             V   IH  + ++       +G +L+D Y  CG V  AR++FDG+              
Sbjct: 222 -EVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTG 280

Query: 208 ------------------CKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTI 249
                              +D+V WT M+  Y +   ++E++ LF +M+V G +P+ + +
Sbjct: 281 YVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIV 340

Query: 250 TAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK 309
            A L  C  L     G+ +H    +     D  VGT L+E+YAK G +  +   F  + +
Sbjct: 341 VALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKE 400

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILG-KQ 368
           KD   W+ +I   A + ++ EALELF  M+     P++ TF  +L AC+   L+  G K 
Sbjct: 401 KDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKL 460

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVT 415
            HS     G++ N+      +D+  + G +  +  L  + P+Q   T
Sbjct: 461 FHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIKKLPDQKNET 507



 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 161/343 (46%), Gaps = 22/343 (6%)

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE---IENSMILFMES 408
           S+L+ C +   L   +QIHS +   GL  +    N L  V            S+ +F  +
Sbjct: 7   SLLKNCKSIFHL---QQIHSLIFTTGLHQDTHTLNKLFSVSIHLNNNNYFHYSLSIFNHT 63

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
              +   +N +I  + +    +  ++LF+ +  N + P   T+  VL+A A  A    G 
Sbjct: 64  LHPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGT 123

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           ++H+   KT  ++D  V+N+ +DMYA+ GRI+  R  FD++ +R+ VSWN MI G     
Sbjct: 124 KIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCR 183

Query: 529 LSTEALNLFNKMQ-QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
              EA+ +F +M+  +N K ++ T V  L+AC+ +  ++ G+ +       + IE  ++ 
Sbjct: 184 RFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEI-----HGFIIEKELD- 237

Query: 588 YTCMVG--LLGRLGK--FDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
           +T  +G  LL    K  +    + I +   + +V  W +++   V    +D  R     +
Sbjct: 238 FTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKAR----DL 293

Query: 644 LEMKPHDDGT-HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKE 685
            +  P  D      + N Y    R+D   ++ + M+ +GVK +
Sbjct: 294 FDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPD 336


>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:2910760-2909010 | 20130731
          Length = 519

 Score =  296 bits (758), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 176/512 (34%), Positives = 267/512 (52%), Gaps = 40/512 (7%)

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           + TSL+   +     + A Q+F  I   D   +  M+   +++     ++ L+ +M    
Sbjct: 44  ISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHF 103

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            + ++YT    LK+C  L     G +VHG  L+  +  +  V   LL  +AK GD+  A 
Sbjct: 104 VKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVAT 163

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F++  K DV+ WS +IA YA+    K A +LF+ M +  +V  N              
Sbjct: 164 SLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWN-------------- 209

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
           ++I G                         Y K GE+E++ +LF E+P ++ V+WN MI 
Sbjct: 210 VMITG-------------------------YVKQGEMESARMLFDEAPVKDVVSWNAMIA 244

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
           GYV  G  ++A+ LF+ M    + P EVT  S+L ACA    L+ G +VH+  ++     
Sbjct: 245 GYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGK 304

Query: 482 -DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
               + NALIDMYAKCG I ++   F  +  ++ +SWN++I G ++HG   E+L+LF  M
Sbjct: 305 LSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMM 364

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
           Q+T   PN++TFVGVL ACS+AG +D+G   F  MS +Y IEP I H  CMV +LGR G 
Sbjct: 365 QRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGL 424

Query: 601 FDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNM 660
             EA K I  +  +P+ ++WR LL AC V  +++L +   + +  M+    G +VL+SN+
Sbjct: 425 LKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNL 484

Query: 661 YAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           YA    WD    VRK M   GV K  G S+VE
Sbjct: 485 YASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516



 Score =  173 bits (439), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 212/434 (48%), Gaps = 42/434 (9%)

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
           A +LF ++P  +T  +  + +G S+S     A+ +   + +   + + +    ++K    
Sbjct: 61  AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
           +   +    +H  V + G  ++A V  +L+  ++ CG+++ A  +FD     D+V+W+ +
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSL 180

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           +  YA     + + +LF +M                                        
Sbjct: 181 IAGYARRGDLKVARKLFNEMP--------------------------------------- 201

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHC 337
           ++DL     ++  Y K G++  A++ F+E P KDV+ W+ MIA Y     SK+ALELF+ 
Sbjct: 202 ERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNE 261

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS-NVFVSNALMDVYAKCG 396
           M ++ V P+  T  S+L ACA    L  GK++H+ V+++ +   +  + NAL+D+YAKCG
Sbjct: 262 MCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCG 321

Query: 397 EIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLR 456
            I+ S+ +F    +++ ++WN++IVG    G G+++++LF  M    + P E+TF  VL 
Sbjct: 322 NIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLV 381

Query: 457 ACAGFAALDPGLQVHSL-TIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREE 514
           AC+    +D G +   L + + +   +I     ++DM  + G + +A    D M  +   
Sbjct: 382 ACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNA 441

Query: 515 VSWNAMICGYSMHG 528
           + W  ++    +HG
Sbjct: 442 IIWRTLLAACKVHG 455



 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 134/291 (46%), Gaps = 20/291 (6%)

Query: 367 KQIHSNVLKVGLDSNV--------FVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNT 418
           KQIH+ ++  G ++NV         +S +L+   A       +  LF + P+ +   +N 
Sbjct: 19  KQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNV 78

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
           MI G  Q  +  +A++L++ M  + ++    TF  VL+AC     ++ G  VH + ++  
Sbjct: 79  MIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLG 138

Query: 479 YNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFN 538
           + ++  V N L+  +AKCG +N A   FD   K + V+W+++I GY+  G    A  LFN
Sbjct: 139 FGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFN 198

Query: 539 KMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRL 598
           +M + +     +   G +      G ++  + LF     D      +  +  M+      
Sbjct: 199 EMPERDLVSWNVMITGYV----KQGEMESARMLF-----DEAPVKDVVSWNAMIAGYVVC 249

Query: 599 GKFDEAVKLIGEI---PFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           G   +A++L  E+      P  +   +LL AC    +++ G+     V+E+
Sbjct: 250 GLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEI 300



 Score = 68.2 bits (165), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 11/185 (5%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQG---CSRSHQFDHALHVIL 134
           DL + N+++  YV+   ++ A  LFDE P+ + +S+  +  G   C  S Q   AL +  
Sbjct: 204 DLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQ---ALELFN 260

Query: 135 RLFKEGHEVNPFVCTTIIKLLVSMDLPHV--CWTIHACVYKRGH-QADAFVGTSLIDAYS 191
            + + G  V P   T +  L    DL  +     +HA V +    +    +G +LID Y+
Sbjct: 261 EMCRAG--VFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYA 318

Query: 192 VCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITA 251
            CGN+  +  VF  I  KD++SW  ++   A +   +ESL LF  M+     PN  T   
Sbjct: 319 KCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVG 378

Query: 252 ALKSC 256
            L +C
Sbjct: 379 VLVAC 383


>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:45010556-45008657 | 20130731
          Length = 512

 Score =  293 bits (749), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 166/507 (32%), Positives = 262/507 (51%), Gaps = 40/507 (7%)

Query: 186 LIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPN 245
           ++ AY     +     +FD +  KD VSW  M+  +      E   + F QM   G  PN
Sbjct: 46  VMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPN 105

Query: 246 NYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFE 305
           +YTI+  L++ +  E   + + VH  A    +  +++VG+ L+  YA   +       F 
Sbjct: 106 DYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFN 165

Query: 306 EMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLIL 365
           ++  KDV  W+ +++ Y +  +  +A   F  M Q                         
Sbjct: 166 DISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQR------------------------ 201

Query: 366 GKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQ 425
                          N+     L++ Y K  ++  +  +F +  E+N V+W  MI GYVQ
Sbjct: 202 ---------------NIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQ 246

Query: 426 LGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAV 485
                 A+ LF  M   + +P   TFSSVL ACAG ++L  GLQ+H   IK+   ND+  
Sbjct: 247 NKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIW 306

Query: 486 ANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC 545
             +L+DMYAKCG ++ A   F+ +  +  VSWNA+I GY+ HGL+T AL  F++M+    
Sbjct: 307 LTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT 366

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAV 605
            P+++TFV VLSAC +AGL+++G+  F  M   Y I+  +EHY+CMV L GR G+FDEA 
Sbjct: 367 -PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAE 425

Query: 606 KLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAK 665
            LI  +PF+P V++W ALL AC +  N++LG + A+ +  ++     ++ +LS +     
Sbjct: 426 NLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKG 485

Query: 666 RWDNVASVRKNMKRKGVKKEPGLSWVE 692
            W +V  +R  MK +G+KK+  +SWVE
Sbjct: 486 VWSSVNELRDTMKERGIKKQTAISWVE 512



 Score =  201 bits (512), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 234/472 (49%), Gaps = 48/472 (10%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGC 120
           N  KQ H  + +     ++ + N+++  Y+Q + +     LFD+MPL + +S+  +  G 
Sbjct: 22  NNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGF 81

Query: 121 SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADA 180
            R+   +      L++ + G   N +  +T+++ ++S +L  +   +HA  +  GH  + 
Sbjct: 82  QRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNV 141

Query: 181 FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM 240
           FVG+SLI AY+     +A  + F+ I  KD+ SW  +V  Y E   + ++   F QM   
Sbjct: 142 FVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQM--- 198

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
              P    I+                                  T L+  Y K+  +  A
Sbjct: 199 ---PQRNIIS---------------------------------WTTLVNGYVKNKQVNKA 222

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           +  F++M +++V+ W+ MI+ Y Q+ R  +AL+LF  M ++   PN+FTF+SVL ACA  
Sbjct: 223 RSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGS 282

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
             LI+G Q+H  ++K G+ ++V    +L+D+YAKCG+++ +  +F    ++N V+WN +I
Sbjct: 283 SSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAII 342

Query: 421 VGYVQLGDGEKAMNLFSSM--IGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR 478
            GY   G   +A+  F  M  +G    P EVTF +VL AC     ++ G + H   + T+
Sbjct: 343 GGYASHGLATRALEEFDRMKVVGT---PDEVTFVNVLSACVHAGLVEEG-EKHFTDMLTK 398

Query: 479 Y--NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMH 527
           Y    ++   + ++D+Y + GR ++A      M    +V  W A++    +H
Sbjct: 399 YGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLH 450


>Medtr7g076707.1 | PPR containing plant-like protein | HC |
           chr7:28928185-28925455 | 20130731
          Length = 569

 Score =  293 bits (749), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 177/540 (32%), Positives = 276/540 (51%), Gaps = 33/540 (6%)

Query: 185 SLIDAYSVC-GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
           +L+ +Y++   N+  A ++F  I    +  W  M+  +++     E+++ +  M      
Sbjct: 15  NLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALF 74

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
            NN T    LK+C  +       +VH   LK  +D DL+V   L+  YA   ++  A+  
Sbjct: 75  GNNLTYPFLLKACARISNVSC-TTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKV 133

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA---- 359
           F+EM ++D++ W+ +I  Y +  R  E L +F  MR + V  +  T   V+ AC      
Sbjct: 134 FDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEW 193

Query: 360 QVLLILGKQIHSNVLKVGL---------------------------DSNVFVSNALMDVY 392
            V+  + + I  N ++V +                           D N+   NA++  Y
Sbjct: 194 GVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGY 253

Query: 393 AKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
            K G +  +  LF + P ++ ++W +MI  Y Q G   KA+ LF  M+   ++P E+T +
Sbjct: 254 GKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVA 313

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
           SVL ACA   ALD G  VH    K   N DI V NALIDMY KCG +      F++M KR
Sbjct: 314 SVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKR 373

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + VSW ++I G +++G +  ALNLF+ M +   +P   TFVGVL AC++AG++DKG   F
Sbjct: 374 DSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYF 433

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
           +SM + Y + P ++HY C+V LL R G    A + I  +P  P V+VWR LL A  V  N
Sbjct: 434 ESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGN 493

Query: 633 IDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           + L     + +LE  P + G ++L SN YA + RW++V  +R+ M+   V K    S VE
Sbjct: 494 LHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVE 553



 Score =  199 bits (506), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 244/492 (49%), Gaps = 48/492 (9%)

Query: 76  PLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILR 135
           P+ +F  N+L ++ +    +  A++LF ++P      +  + +G S+++Q   A+     
Sbjct: 10  PISIF--NLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNL 67

Query: 136 LFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGN 195
           ++ +    N      ++K    +     C T+HA V K G  +D FV  +LI  Y+    
Sbjct: 68  MYSQALFGNNLTYPFLLKACARISNVS-CTTVHARVLKLGFDSDLFVSNALIHGYAGFCE 126

Query: 196 VDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
           +  AR+VFD +  +D+VSW  ++  Y     Y E L +F +MR+   + +  T+   + +
Sbjct: 127 LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLA 186

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLEL------------------------- 290
           C  L  +GV  ++     +   + D+Y+G  L+++                         
Sbjct: 187 CTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSW 246

Query: 291 ------YAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
                 Y K+G++V A+  F++MP +DVI W+ MI+ Y+Q+ +  +A+ LF  M  + V 
Sbjct: 247 NAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVK 306

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           P+  T ASVL ACA    L +G+ +H  + K  ++++++V NAL+D+Y KCG +E  + +
Sbjct: 307 PDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSV 366

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F E  +++ V+W ++I G    G  + A+NLFS M+   ++PT  TF  VL ACA    +
Sbjct: 367 FEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVV 426

Query: 465 DPGLQ-------VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE-VS 516
           D GL+       V+ LT + ++         ++D+ ++ G +  A     +M    + V 
Sbjct: 427 DKGLEYFESMERVYGLTPEMKH------YGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVV 480

Query: 517 WNAMICGYSMHG 528
           W  ++    +HG
Sbjct: 481 WRILLSASQVHG 492



 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 179/388 (46%), Gaps = 33/388 (8%)

Query: 66  LHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQ 125
           +H  +LK G   DLF  N L++ Y  F  L  A K+FDEM   + +S+ +L  G  R  +
Sbjct: 98  VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRR 157

Query: 126 FDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTS 185
           +   L V   +     + +      ++     +    V   +   + +   + D ++G +
Sbjct: 158 YSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNT 217

Query: 186 LID-------------------------------AYSVCGNVDAARQVFDGIFCKDMVSW 214
           LID                                Y   GN+ AAR++FD +  +D++SW
Sbjct: 218 LIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISW 277

Query: 215 TGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
           T M+  Y++   + ++++LF +M V   +P+  T+ + L +C  + A  VG++VH    K
Sbjct: 278 TSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK 337

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
              + D+YVG  L+++Y K G +      FEEM K+D + W+ +IA  A +  +  AL L
Sbjct: 338 YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNL 397

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYA 393
           F  M +  V P + TF  VL ACA   ++  G +   ++ +V GL   +     ++D+ +
Sbjct: 398 FSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLS 457

Query: 394 KCGEIENSMILFMESP-EQNEVTWNTMI 420
           + G +  +       P + + V W  ++
Sbjct: 458 RSGNLGRAYEFIKRMPMDPDVVVWRILL 485


>Medtr3g088835.1 | PPR containing plant-like protein | HC |
           chr3:40655233-40657665 | 20130731
          Length = 629

 Score =  293 bits (749), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 318/606 (52%), Gaps = 37/606 (6%)

Query: 148 CTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFD--- 204
           C+T++   +S    +    +HA   K G  +  ++G   ID Y+  GN++ A +VFD   
Sbjct: 18  CSTLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDLYTEFGNINDALKVFDDIS 77

Query: 205 ------------GIF----------------CKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
                       G+F                 +D+VSW  M+  YA   F   +L +F +
Sbjct: 78  YKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFVE 137

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD-QDLYVGTELLELYAKSG 295
           M+  G RP+ +T +  L S +        K VHG  +++  +  ++ +G  L+ +Y K  
Sbjct: 138 MQGAGVRPSGFTFSI-LTSLVSSSC--RAKEVHGMMIRSGMELSNVVIGNSLIAMYGKF- 193

Query: 296 DIVDAQL-FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
           D+VD        M + D I W+ +I    ++ R + ALE F CM+ + ++P+ FT ++++
Sbjct: 194 DLVDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLM 253

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
             C+    L  GKQ+ +   KVG   N  VS+A +D+++KC  +E+++ LF E  + +  
Sbjct: 254 SVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSA 313

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLT 474
             N+MI  Y +   GE A+ LF   +  +++PT+ T S +L + + F  ++ G Q+H+L 
Sbjct: 314 LCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALV 373

Query: 475 IKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEAL 534
            K  + +D  V N+L+DMYAK G I++A   F+++  ++ VSWN ++ G S +G     +
Sbjct: 374 HKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLSYNGKVCVTM 433

Query: 535 NLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
           +LF ++++    P+++T   VL AC+   L+D+G  +F  M  ++ ++P  EHY+ +V +
Sbjct: 434 DLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFGVKPEEEHYSYVVEM 493

Query: 595 LGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTH 654
           L R G   EAV ++ ++P++ +  +WR++L AC V  ++      A  ++E  P     +
Sbjct: 494 LCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVATKIMERAPQISLPY 553

Query: 655 VLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLIC 714
           ++L+ +Y ++ RW++   VRK M+ +G K+  G SWV  +  V+ F      H   K I 
Sbjct: 554 LVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWVGIKNHVYTFESNQLQHYGGKDIY 613

Query: 715 AMLEWL 720
            +L  L
Sbjct: 614 LLLNLL 619



 Score =  157 bits (398), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 234/515 (45%), Gaps = 37/515 (7%)

Query: 48  AALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK------- 100
           + LL   + ++  N    +H   LK G     +  N  ++ Y +F  ++DA K       
Sbjct: 19  STLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDLYTEFGNINDALKVFDDISY 78

Query: 101 ------------------------LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL 136
                                   +FDEMP+ + +S+ T+  G +      HAL V + +
Sbjct: 79  KNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFVEM 138

Query: 137 FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQ-ADAFVGTSLIDAYSVCGN 195
              G   + F  + +  L+ S         +H  + + G + ++  +G SLI  Y     
Sbjct: 139 QGAGVRPSGFTFSILTSLVSSSCRAK---EVHGMMIRSGMELSNVVIGNSLIAMYGKFDL 195

Query: 196 VDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKS 255
           VD    V   +   D +SW  ++         E +L+ FC M+     P+ +T +  +  
Sbjct: 196 VDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLMSV 255

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
           C  L     GK V     K  +  +  V +  ++L++K   + DA   FEE  + D    
Sbjct: 256 CSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALC 315

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           + MI+ YA+ D  ++AL+LF    + ++ P  +T + +L + +  + + +G QIH+ V K
Sbjct: 316 NSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALVHK 375

Query: 376 VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNL 435
            G +S+  V+N+L+D+YAK G I+N++ +F E   ++ V+WNT+++G    G     M+L
Sbjct: 376 FGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLSYNGKVCVTMDL 435

Query: 436 FSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS-LTIKTRYNNDIAVANALIDMYA 494
           F  +    M P  +T ++VL AC     +D G+++ S + ++     +    + +++M  
Sbjct: 436 FEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFGVKPEEEHYSYVVEMLC 495

Query: 495 KCGRINDARLTFDKMDKREEVS-WNAMICGYSMHG 528
           + G + +A    +KM  +     W +++   ++ G
Sbjct: 496 RAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSG 530



 Score = 73.2 bits (178), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 129/276 (46%), Gaps = 15/276 (5%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D  + + L+      R    GKQ+     K G   +    +  ++ + + + L+DA +LF
Sbjct: 245 DEFTCSTLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLF 304

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP- 161
           +E    ++    ++    +R    + AL + +   ++      +  + ++   VS+ LP 
Sbjct: 305 EEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLS-SVSIFLPV 363

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
            V   IHA V+K G ++D+ V  SL+D Y+  G +D A  +F+ I  KD+VSW  ++   
Sbjct: 364 EVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGL 423

Query: 222 AENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC-------LGLEAFGVGKSVHGCALK 274
           + N     ++ LF ++R  G  P+  T+ A L +C        G++ F   +   G  +K
Sbjct: 424 SYNGKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFG--VK 481

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
              +   YV    +E+  ++G++ +A    E+MP K
Sbjct: 482 PEEEHYSYV----VEMLCRAGNLKEAVDIVEKMPYK 513


>Medtr1g052100.1 | PPR containing plant-like protein | HC |
           chr1:20983048-20985397 | 20130731
          Length = 733

 Score =  291 bits (746), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 198/679 (29%), Positives = 346/679 (50%), Gaps = 52/679 (7%)

Query: 56  QNRHPNA-GKQLHCDILKRGAPLDLFAH--NILLNFYVQFDCLDDASKLFDEMPLTNTIS 112
           + RH    G QLH   +K    L  ++H  N LL+ Y +   L     +FD++   +  S
Sbjct: 66  KTRHVTVFGNQLHSFAIK--TALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYS 123

Query: 113 FVTLAQGCSRSHQFDHALHVI---------------------------LRLFKEGHEVN- 144
           + T+    SR    D+ALHV                             RL K+   +N 
Sbjct: 124 WTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNV 183

Query: 145 ---PFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQ 201
               +   T++ L    +       +H+ V K G      V  SLI  Y  CG V    +
Sbjct: 184 RGDNYTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYK 243

Query: 202 VFDGI--FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGL 259
           VF+ +    ++ V++  M+  +     +E++  +F  M       +  T  + L SC  L
Sbjct: 244 VFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCSL 303

Query: 260 EAFGVGKSVHGCALKACYDQDLY-VGTELLELYAKSGDIVDAQLFFEEMPK-KDVIPWSL 317
               VG    G A+K  +D     V    + +Y+  G + +A+  FE M + +D++ W++
Sbjct: 304 R---VGCQAQGLAIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFEIMEESRDLVSWNV 360

Query: 318 MIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG 377
           M++ + Q + +++A+  +  MR+  + P+ FT+ S+L A  +   L + + IHS + K G
Sbjct: 361 MVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASDS---LQMVEMIHSVLCKNG 417

Query: 378 LDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFS 437
           L+  V V NAL+  Y++ G+I+ +  +F +   ++ ++WN++I G+V  G   + +  FS
Sbjct: 418 LN-KVEVLNALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFS 476

Query: 438 SMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCG 497
           +++   ++P   + S  L  C+    +D G QVH   ++  ++++I++ NAL+ MY+KCG
Sbjct: 477 ALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCG 536

Query: 498 RINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ-QTNCKPNKLTFVGVL 556
            ++ +   F++M +R+ ++WNA+I  YS HG   EA++ F  MQ     KP+  TF  VL
Sbjct: 537 FLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVL 596

Query: 557 SACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF--Q 614
           SACS++GL+D    +F  M   Y   P ++H++C+V LLGR G  DEA +++ +  F   
Sbjct: 597 SACSHSGLVDDATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGAH 656

Query: 615 PSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVR 674
           P+ M W +L  AC V  N+ LGR  A+ +LE + ++   +VLL+N+ A A +W+  A +R
Sbjct: 657 PN-MCW-SLFSACAVHGNLTLGRKVARLLLEREQNNPSVYVLLANICAEAGQWEEAAKLR 714

Query: 675 KNMKRKGVKKEPGLSWVEN 693
             +K+ G  K+PG SW+  
Sbjct: 715 DMVKQFGTTKQPGCSWIST 733



 Score =  150 bits (380), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 235/503 (46%), Gaps = 50/503 (9%)

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV-GKSVHGCALKACYDQDLY 282
           N FYE SL+LF ++    ++P++ T++  + +        V G  +H  A+K       +
Sbjct: 34  NQFYE-SLKLFTKIH-SSHKPDHCTLSTTITATSKTRHVTVFGNQLHSFAIKTALKAYSH 91

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ------------------ 324
           V   LL LYAK+ D+V  +L F+++   DV  W+ +++  ++                  
Sbjct: 92  VANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCY 151

Query: 325 -----------SDRSKE--ALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHS 371
                      SD   E  A  L   M + +V  +N+TFA++L  C     L  G+ +HS
Sbjct: 152 VAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHS 211

Query: 372 NVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPEQNEVTWNTMIVGYVQLGDG 429
            V+K G      V N+L+ +Y  CG + +   +F  ME   +N VT+N MI G+V +   
Sbjct: 212 VVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERF 271

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN-NDIAVANA 488
           E A  +F  M    +  +EVTF SVL +C    +L  G Q   L IK  ++    AV NA
Sbjct: 272 EDAFLMFRDMHRGSVCLSEVTFVSVLSSC---CSLRVGCQAQGLAIKMGFDCGYTAVNNA 328

Query: 489 LIDMYAKCGRINDARLTFDKMDK-REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
            + MY+  G++N+AR  F+ M++ R+ VSWN M+  +    ++ +A+  + KM++   +P
Sbjct: 329 TMTMYSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEP 388

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKL 607
           +  T+  +LSA  +  +++   S+        N    +E    ++    R G+   A ++
Sbjct: 389 DAFTYGSLLSASDSLQMVEMIHSVLCK-----NGLNKVEVLNALISSYSRNGQIKRAFQI 443

Query: 608 IGEIPFQPSVMVWRALLGACVVQKNI--DLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAK 665
             ++ ++ S++ W +++   V+       L +F A     +KP+     + LS + +   
Sbjct: 444 FSDLAYK-SLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALS-ICSCTP 501

Query: 666 RWDNVASVRKNMKRKGVKKEPGL 688
             D+   V   + R G   E  L
Sbjct: 502 DMDHGKQVHGYILRHGFDSEISL 524



 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 167/368 (45%), Gaps = 39/368 (10%)

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA-A 359
           +++ +    + ++  +  +    ++++  E+L+LF  +  SS  P++ T ++ + A +  
Sbjct: 9   RIWTDTFSNQQILKLNHKLTHLTKTNQFYESLKLFTKI-HSSHKPDHCTLSTTITATSKT 67

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC------------------------ 395
           + + + G Q+HS  +K  L +   V+N+L+ +YAK                         
Sbjct: 68  RHVTVFGNQLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTV 127

Query: 396 -------GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTE 448
                   +I+ ++ +F + P+     WN +I G    G  + A  L   M   +++   
Sbjct: 128 LSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDN 187

Query: 449 VTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK 508
            TF+++L  C     LD G  VHS+ +K+ + +  +V N+LI MY  CG + D    F++
Sbjct: 188 YTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEE 247

Query: 509 MDK--REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD 566
           M+   R  V++NAMI G+       +A  +F  M + +   +++TFV VLS+C +  +  
Sbjct: 248 MEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCSLRVGC 307

Query: 567 KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           + Q L   M  D            M    G++ +     +++ E      ++ W  ++ +
Sbjct: 308 QAQGLAIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFEIMEE---SRDLVSWNVMV-S 363

Query: 627 CVVQKNID 634
              Q+NI+
Sbjct: 364 MFFQENIN 371


>Medtr2g013500.1 | PPR containing plant-like protein | HC |
           chr2:3639056-3640975 | 20130731
          Length = 515

 Score =  291 bits (746), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 160/463 (34%), Positives = 257/463 (55%), Gaps = 9/463 (1%)

Query: 236 QMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSG 295
           QM       N+YT T ALK+C    A   G  +H   +K+ +  D ++   LL  Y  S 
Sbjct: 48  QMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSN 107

Query: 296 DIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQ 355
           D+V A   F+ +P  DV+ W+ +I+  ++     EA+E F  +   +V PN  T  S + 
Sbjct: 108 DVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVKPNALTLVSAIS 164

Query: 356 ACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
           AC++   +  GK IH+  LK + +D N+   NA +D+YAKCG   N+  +F++  +++ +
Sbjct: 165 ACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVI 224

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMI-GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSL 473
           +W T+++ Y + G   +A+ +F  MI   + +P E T  +VL ACA   +L  G  VH  
Sbjct: 225 SWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDY 284

Query: 474 TIKTRYNNDI--AVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLST 531
            I+ R + D+   + NAL++MY KCG +      F+ +  ++ +SW  +ICG +M+G   
Sbjct: 285 -IEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGK 343

Query: 532 EALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCM 591
           + + +F+ M      P+ +TF+G+LSACS+ GL+ +G   FK+M   Y I P + HY CM
Sbjct: 344 QVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCM 403

Query: 592 VGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDD 651
           V + GR   F+EAV  +  +P +    +W ALL AC    N ++  +    + + K    
Sbjct: 404 VDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHD-KNVGV 462

Query: 652 GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQ 694
           GT  LLSN+YA ++RWD+  +VRK M+  G+KK  GLSWVE +
Sbjct: 463 GTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVEPE 505



 Score =  169 bits (429), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 191/368 (51%), Gaps = 10/368 (2%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           IHA + K GH  D F+  +L+  Y    +V +A +VF  I   D+VSWT ++   ++  F
Sbjct: 80  IHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGF 139

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY-DQDLYVGT 285
             E+++ F  + V   +PN  T+ +A+ +C  + A   GK++H   LK+   D ++    
Sbjct: 140 ETEAIEAFSSINV---KPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYN 196

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS-VV 344
             L+LYAK G   +A+  F +M K+DVI W+ ++  YA+  +  EA+E+F  M  S    
Sbjct: 197 AALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAE 256

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMI 403
           PN  T  +VL ACA+   L LG  +H  + K + LD +  + NAL+++Y KCG+++  + 
Sbjct: 257 PNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLK 316

Query: 404 LFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAA 463
           +F     ++ ++W T+I G    G G++ + +FS M+ + + P +VTF  +L AC+    
Sbjct: 317 VFNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGL 376

Query: 464 LDPGLQVHSLTIKTRYN--NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAM 520
           +  G+      ++  Y     ++    ++DMY +     +A      M    E   W+A+
Sbjct: 377 VSEGMMFFK-AMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSAL 435

Query: 521 ICGYSMHG 528
           +     HG
Sbjct: 436 LQACKTHG 443



 Score =  128 bits (321), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 131/245 (53%), Gaps = 5/245 (2%)

Query: 326 DRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
           D  K    L + M   S   N++TF   L+AC +      G +IH+ ++K G   + F+ 
Sbjct: 37  DNVKAFFNLCNQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIK 96

Query: 386 NALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQ 445
           N L+  Y    ++ ++  +F   P  + V+W ++I G  + G   +A+  FSS+   +++
Sbjct: 97  NTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVK 153

Query: 446 PTEVTFSSVLRACAGFAALDPGLQVHSLTIKT-RYNNDIAVANALIDMYAKCGRINDARL 504
           P  +T  S + AC+   A+  G  +H+  +K+   + +I   NA +D+YAKCG  ++AR 
Sbjct: 154 PNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARN 213

Query: 505 TFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN-CKPNKLTFVGVLSACSNAG 563
            F KM KR+ +SW  ++  Y+  G   EA+ +F +M  +   +PN+ T V VLSAC++ G
Sbjct: 214 VFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIG 273

Query: 564 LLDKG 568
            L  G
Sbjct: 274 SLSLG 278



 Score =  113 bits (283), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 160/363 (44%), Gaps = 8/363 (2%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           G ++H  ++K G   D F  N LL FY+  + +  A+++F  +P  + +S+ +L  G S+
Sbjct: 77  GLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSK 136

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGH-QADAF 181
                 A+     +     + N     + I    S+        IHA   K      +  
Sbjct: 137 CGFETEAIEAFSSI---NVKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIV 193

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
              + +D Y+ CG    AR VF  +  +D++SWT ++  YA      E++++F QM V G
Sbjct: 194 FYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSG 253

Query: 242 -YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKAC-YDQDLYVGTELLELYAKSGDIVD 299
              PN  T+   L +C  + +  +G  VH    K    D D  +G  L+ +Y K GD+  
Sbjct: 254 EAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKM 313

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
               F  +  KDVI W  +I   A +   K+ +++F  M    V+P++ TF  +L AC+ 
Sbjct: 314 GLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSH 373

Query: 360 QVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNE-VTWN 417
             L+  G      +    G+   +     ++D+Y +    E ++      P + E   W+
Sbjct: 374 VGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWS 433

Query: 418 TMI 420
            ++
Sbjct: 434 ALL 436



 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 4/193 (2%)

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMY 493
           NL + M+         TF+  L+AC  + A   GL++H+  IK+ +  D  + N L+  Y
Sbjct: 44  NLCNQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFY 103

Query: 494 AKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFV 553
                +  A   F  +   + VSW ++I G S  G  TEA+  F+ +   N KPN LT V
Sbjct: 104 LSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVKPNALTLV 160

Query: 554 GVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPF 613
             +SACS+ G +  G+++     +   I+  I  Y   + L  + G F  A  +  ++  
Sbjct: 161 SAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMS- 219

Query: 614 QPSVMVWRALLGA 626
           +  V+ W  LL A
Sbjct: 220 KRDVISWTTLLMA 232


>Medtr3g096440.1 | PPR containing plant-like protein | HC |
           chr3:44085648-44087691 | 20130731
          Length = 580

 Score =  291 bits (744), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 167/497 (33%), Positives = 272/497 (54%), Gaps = 40/497 (8%)

Query: 287 LLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS--SVV 344
           LL  Y+K G    A   F+EMP+++++ ++ +I+   + +  KEA++ F  M+     ++
Sbjct: 83  LLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLM 142

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
            + FT  S++  C+    +   +Q+H     VG  +N+ ++NAL+D Y KCGE  +S  L
Sbjct: 143 LDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCL 202

Query: 405 FMESPEQNEVTWNTMIV-------------------------------GYVQLGDGEKAM 433
           F    E++ V+W +M+V                               G+V+ G   +A+
Sbjct: 203 FRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEAL 262

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNND---IAVANALI 490
            +F  MI   + P   TF SVL ACA  A +  G QVH   I+ R +++   + V NAL+
Sbjct: 263 EVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALM 322

Query: 491 DMYAKCGRINDARLTFDKM-DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNK 549
           DMYAKCG +  A   F+ M   ++ VSWN +I G++ +G   ++L +F++M ++N +PN 
Sbjct: 323 DMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNH 382

Query: 550 LTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIG 609
           +TF+GVLSAC++AGL++ G  L  SM + Y ++P   HY  ++ LLGR  + +EA+ LI 
Sbjct: 383 VTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIE 442

Query: 610 EIPFQPS--VMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRW 667
           ++P + S  + +W A+LG C V  N++L R  A+ +  ++P + G +V+LSN+YA + RW
Sbjct: 443 KVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYAASGRW 502

Query: 668 DNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDA 727
            +   +R  MK +G+KKEP  S +E +   H F   D  HP    I      L +   D 
Sbjct: 503 SDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHPQIGEIREANSKLVQHMMDV 562

Query: 728 GYVPDCN-AVLLDVEDD 743
           GY P  +   LLD +DD
Sbjct: 563 GYQPCISYPSLLDEDDD 579



 Score =  173 bits (438), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 207/392 (52%), Gaps = 55/392 (14%)

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR--VMGY 242
           +L+  YS  G  + A ++FD +  +++VS+  ++     + F++E+++ F +M+  V G 
Sbjct: 82  TLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGL 141

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGD------ 296
             + +T+ + + +C  L+     + VHG A    +  +L +   L++ Y K G+      
Sbjct: 142 MLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFC 201

Query: 297 -------------------------IVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEA 331
                                    I DA   F EMP K  + W+ +I+ + ++ R  EA
Sbjct: 202 LFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEA 261

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS----NVFVSNA 387
           LE+FH M +  V+P   TF SVL ACA++ L+  GKQ+H  +++ G  S    NV+V NA
Sbjct: 262 LEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSDNLFNVYVFNA 320

Query: 388 LMDVYAKCGEIENSMILF-MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQP 446
           LMD+YAKCG+++++  LF M    ++ V+WNT+I G+ Q G GE ++ +F  MI ++++P
Sbjct: 321 LMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEP 380

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY-----NNDIAVANALIDMYAKCGRIND 501
             VTF  VL AC     ++ GL++   +++ RY     +N  A+   LID+  +  R+ +
Sbjct: 381 NHVTFLGVLSACNHAGLVNAGLELLD-SMERRYGVKPKSNHYAL---LIDLLGRKNRLEE 436

Query: 502 ARLTFDKMDKREEVS-----WNAMICGYSMHG 528
           A    +K+    E+S     W A++ G  +HG
Sbjct: 437 AMCLIEKVPN--EISNHIAMWGAVLGGCRVHG 466



 Score =  108 bits (270), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 149/361 (41%), Gaps = 77/361 (21%)

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           +FH    SS +     F+S++  C +   L  GK +HS ++K  L    F++N L+D+Y+
Sbjct: 1   MFHTNDFSSTIEK---FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYS 57

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM-------------- 439
           KCG  E+    F + P +   TWNT++  Y + G   +A  LF  M              
Sbjct: 58  KCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISG 117

Query: 440 ------------IGNDMQP-------TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN 480
                          +MQ         E T  S++  C+    +    QVH +     + 
Sbjct: 118 LTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFR 177

Query: 481 NDIAVANALIDMYAKCG-------------------------------RINDARLTFDKM 509
            ++ + NALID Y KCG                               RI+DA   F++M
Sbjct: 178 TNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEM 237

Query: 510 DKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ 569
             +  VSW A+I G+  +G   EAL +F++M +    P   TFV VL AC++  L+ +G+
Sbjct: 238 PVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGK 297

Query: 570 ----SLFKSMSQD--YNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRAL 623
                + +  S D  +N+      +  ++ +  + G    A  L   +     V+ W  L
Sbjct: 298 QVHCQIIRGRSSDNLFNVYV----FNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTL 353

Query: 624 L 624
           +
Sbjct: 354 I 354


>Medtr4g068900.1 | PPR containing plant-like protein | HC |
           chr4:25858642-25860684 | 20130731
          Length = 680

 Score =  290 bits (742), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 186/617 (30%), Positives = 301/617 (48%), Gaps = 75/617 (12%)

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE-ESLQLFCQM 237
           +A+   +LI AY    N+  AR VFD    +D+VS+  M+  Y     YE E++ LF +M
Sbjct: 57  NAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKM 116

Query: 238 R----VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
           +    ++G   + +++T  +     L     GK +H   +K   D   +  + L+ +Y+K
Sbjct: 117 QSARDMIG--IDEFSLTTMVNFSAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINMYSK 174

Query: 294 SGDIVDA---------------------------------QLFFEEMPKKDVIPWSLMIA 320
            G   DA                                  +F++     D + W+ +IA
Sbjct: 175 CGLFRDACSVVSGFDGVVDLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIA 234

Query: 321 RYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS 380
            YAQ+    +AL LF  M +  V  +  T ASVL  C+    L LGK +H+ VLK   +S
Sbjct: 235 GYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNS 294

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI 440
           N F+S+ ++D+Y KCG I  + +++     +++   +++IVGY   G+  KA  LF S++
Sbjct: 295 NQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLL 354

Query: 441 G--------------------------------NDMQPTEVTFSSVLRACAGFAALDPGL 468
                                             ++ P  +    VL ACA  A L  G 
Sbjct: 355 ERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGK 414

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREE--VSWNAMICGYSM 526
           Q+H+  ++ R   D  + +A++DMY+KCG I  A  +F  M  R+   + +N MI GY+ 
Sbjct: 415 QIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAH 474

Query: 527 HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
           HG   +A+ LF+ M + N KP+ +TFV +LSAC + GL+++G+  F SM +DY++ P I 
Sbjct: 475 HGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISM-EDYSVLPEIN 533

Query: 587 HYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEM 646
           HY CMV + GR  + ++A++ + +IP Q    +W A L AC +  N  L     + +L++
Sbjct: 534 HYACMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVNKAEEELLKI 593

Query: 647 KPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTS 706
                   V L+N+YA    W+ +  +RK M+ K  KK  G SW+  +  +H F+ GDTS
Sbjct: 594 GADTGSRCVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYVENGIHAFTSGDTS 653

Query: 707 HPDNKLICAMLEWLNKK 723
           H     I + L  LN K
Sbjct: 654 HAKADAIYSTLLCLNWK 670



 Score =  173 bits (439), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 244/544 (44%), Gaps = 115/544 (21%)

Query: 67  HCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTL------AQGC 120
           H   +K G    +F  N L++ Y +   L DA KLFDE+P  N  S+  L      AQ  
Sbjct: 15  HVQAIKSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNL 74

Query: 121 SRSHQ-FDHALHVILRLFK---------EGHE------------------VNPFVCTTII 152
           +++   FD A+   L  +          +G+E                  ++ F  TT++
Sbjct: 75  TQARAVFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMV 134

Query: 153 KLLVSMDLPHVCW--TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQV---FDGIF 207
               S  L  VC+   +H+ + K       F  +SLI+ YS CG    A  V   FDG+ 
Sbjct: 135 NF--SAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVV 192

Query: 208 ------------CK------------------DMVSWTGMVGCYAENCFYEESLQLFCQM 237
                       C+                  D VSW  ++  YA+N + +++L LF +M
Sbjct: 193 DLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKM 252

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
              G R + +T+ + L  C GL+   +GK VH   LK  Y+ + ++ + +++LY K G+I
Sbjct: 253 TERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNI 312

Query: 298 -------------------------------VDAQLFFEEMPKKDVIPWSLMIARYAQSD 326
                                          + AQ  F+ + +++ + W+ + + YA+S 
Sbjct: 313 RYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQ 372

Query: 327 RSKEALELFH-CMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS 385
           + +E  +LF   + +  ++P+      VL ACA Q  L LGKQIH+ +L++ L  +  + 
Sbjct: 373 QCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKKLL 432

Query: 386 NALMDVYAKCGEI---ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
           +A++D+Y+KCG I   E S  L M   +++ + +N MI GY   G   KA+ LF  M+  
Sbjct: 433 SAMVDMYSKCGNIMYAEKSFQL-MTDRDRDVILYNVMIAGYAHHGFENKAIQLFHDMLKK 491

Query: 443 DMQPTEVTFSSVLRACAGFAALDPG----LQVHSLTIKTRYNNDIAVANALIDMYAKCGR 498
           +++P  VTF ++L AC     ++ G    + +   ++    N+       ++DMY +  +
Sbjct: 492 NVKPDAVTFVALLSACRHRGLVEQGEIFFISMEDYSVLPEINH----YACMVDMYGRANQ 547

Query: 499 INDA 502
           +  A
Sbjct: 548 LEKA 551



 Score =  139 bits (351), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 206/477 (43%), Gaps = 105/477 (22%)

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQS--- 325
           H  A+K+ +   ++   +L+ LY+K G + DA   F+E+P  +   W+ +I  Y ++   
Sbjct: 15  HVQAIKSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNL 74

Query: 326 -----------DR------------------SKEALELFHCMRQSS--VVPNNFTFASVL 354
                      DR                    EA++LF  M+ +   +  + F+  +++
Sbjct: 75  TQARAVFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMV 134

Query: 355 QACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC------------------- 395
              A   L+  GKQ+HS ++K   D + F S++L+++Y+KC                   
Sbjct: 135 NFSAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDL 194

Query: 396 -------------GEIENSMILFMESPEQNE-VTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
                        GE++ ++ +F ++ E N+ V+WNT+I GY Q G  +KA+ LF  M  
Sbjct: 195 VSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTE 254

Query: 442 NDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIND 501
             ++  E T +SVL  C+G   L  G  VH+  +K  YN++  +++ ++D+Y KCG I  
Sbjct: 255 RGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRY 314

Query: 502 ARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSN 561
           A L +  +  + + + +++I GYS  G   +A  LF+ + + N        V   + CS 
Sbjct: 315 AELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNS-------VVWTALCSG 367

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
                + + +FK   +    E  I                             P  M+  
Sbjct: 368 YAKSQQCEEVFKLFRKFVTREELI-----------------------------PDAMIII 398

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMK 678
            +LGAC  Q  + LG+    ++L M+   D    LLS M  +  +  N+    K+ +
Sbjct: 399 RVLGACATQATLSLGKQIHTYILRMRLKMDKK--LLSAMVDMYSKCGNIMYAEKSFQ 453



 Score =  113 bits (283), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/450 (22%), Positives = 195/450 (43%), Gaps = 74/450 (16%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           +D  S   ++  + + R    GKQ+H  ++K  + L  FA + L+N Y +     DA  +
Sbjct: 125 IDEFSLTTMVNFSAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSV 184

Query: 102 ---FD-------------------EM-----------PLTNTISFVTLAQGCSRSHQFDH 128
              FD                   EM            L +T+S+ TL  G +++   D 
Sbjct: 185 VSGFDGVVDLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDK 244

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLID 188
           AL + +++ + G   +     +++ +   +    +   +HA V K  + ++ F+ + ++D
Sbjct: 245 ALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVD 304

Query: 189 AYSVCGNVD-------------------------------AARQVFDGIFCKDMVSWTGM 217
            Y  CGN+                                 A+++FD +  ++ V WT +
Sbjct: 305 LYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTAL 364

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYR----PNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
              YA++   EE  +LF   R    R    P+   I   L +C       +GK +H   L
Sbjct: 365 CSGYAKSQQCEEVFKLF---RKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYIL 421

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP--KKDVIPWSLMIARYAQSDRSKEA 331
           +     D  + + ++++Y+K G+I+ A+  F+ M    +DVI +++MIA YA      +A
Sbjct: 422 RMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKA 481

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDV 391
           ++LFH M + +V P+  TF ++L AC  + L+  G+    ++    +   +     ++D+
Sbjct: 482 IQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMEDYSVLPEINHYACMVDM 541

Query: 392 YAKCGEIENSMILFMESPEQNEVT-WNTMI 420
           Y +  ++E ++    + P Q + T W   +
Sbjct: 542 YGRANQLEKALEFMRKIPIQIDATIWGAFL 571


>Medtr2g071810.1 | PPR containing plant-like protein | HC |
           chr2:30002268-30006207 | 20130731
          Length = 789

 Score =  288 bits (737), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 196/696 (28%), Positives = 340/696 (48%), Gaps = 67/696 (9%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-LDDASKLFDE 104
           ++ A+L    QN      ++L  ++ +R        +N +++ Y++  C +  A +LF  
Sbjct: 63  TWTAMLTVYAQNGQITTARKLFDEMPERTTA----TYNAMISGYIRNGCNVTKAYELFTS 118

Query: 105 MPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEG-HEVNPFVCTT-IIKLLVSMDLPH 162
               N +S+  +  G  ++ +FD A     +L++E  HE    VC+  +I   + +   +
Sbjct: 119 FHDRNEVSYAAMIMGLVKARKFDLAE----KLYREAPHEFRDPVCSNALINGYLKIGEMN 174

Query: 163 VCWTI--HACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
               +  +  V KR    D    ++++      G +D AR +FD +  +++VSW+ M+  
Sbjct: 175 EALRVFENVGVSKR----DVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDG 230

Query: 221 YAENCFYEESLQLFCQMRVMGY-RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ 279
           Y E   +E    LF  MR  G    N+ T+T  +K C        G  +HG   +  ++ 
Sbjct: 231 YMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEF 290

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
              +   ++ +Y+  G    A+  F  M  KD++ W+ +I+ Y  ++    A E+F  M 
Sbjct: 291 GSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMP 350

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
           +  ++                                          A++  +A  G I 
Sbjct: 351 EKDLIS---------------------------------------WTAMIRGFATDGRIG 371

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
            ++ LF    E+++  W  +I G+V   + E+A++ F  M     +P  +T SSVL A A
Sbjct: 372 KAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASA 431

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
              AL+ GLQ+HS  +K     D+++ N+LI  YAKCG + DA   F  + +   VS+N+
Sbjct: 432 SLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNS 491

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           +I G++ +G   EAL+++ +MQ  + +PN++TF+ VLSAC++AGL+++G +LF +M   Y
Sbjct: 492 VINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRY 551

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFC 639
            IEP  +HY CMV LLGR G  DEA+  +  +P +P   VW ALL A    + IDL +  
Sbjct: 552 GIEPEADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLA 611

Query: 640 AQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQG---- 695
           AQH+ E++P +   +V+LSN Y+ + +      VRK    KG+KK PG SW+  +     
Sbjct: 612 AQHITELEPANATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIKKSPGCSWITIKDKALK 671

Query: 696 VVHYFSVGDTSHPD------NKLICAMLEWLNKKTR 725
           ++ ++ V   +H +      N L+C  L   NK  +
Sbjct: 672 IILFYPVPAMAHAEKNGLGSNLLLCKYLSNSNKTVK 707



 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/490 (21%), Positives = 211/490 (43%), Gaps = 82/490 (16%)

Query: 170 CVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAEN-CFYE 228
            ++ R  Q +    T+++  Y+  G +  AR++FD +  +   ++  M+  Y  N C   
Sbjct: 51  TIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVT 110

Query: 229 ESLQLFCQMR----------VMG-------------YRP----------NNYTITAALKS 255
           ++ +LF              +MG             YR           +N  I   LK 
Sbjct: 111 KAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHEFRDPVCSNALINGYLKI 170

Query: 256 CLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
               EA  V ++V          +D+   + ++    + G I +A++ F+ MP+++V+ W
Sbjct: 171 GEMNEALRVFENV------GVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSW 224

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVP-NNFTFASVLQACAAQVLLILGKQIHSNVL 374
           S MI  Y +    +    LF  MR+  VV  N+ T   +++ C     +  G QIH  V 
Sbjct: 225 SAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVS 284

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
           ++G +    +SN ++ +Y+  G  + +  +F     ++ VTWN++I GY+   + + A  
Sbjct: 285 RLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYE 344

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYA 494
           +F  M   D+    +++++++R                                    +A
Sbjct: 345 VFERMPEKDL----ISWTAMIRG-----------------------------------FA 365

Query: 495 KCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVG 554
             GRI  A   FD + ++++  W  +I G+  +    EAL+ F +M +  C+PN LT   
Sbjct: 366 TDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISS 425

Query: 555 VLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQ 614
           VLSA ++   L++G  +  S     N+E  +     ++    + G   +A K+  ++  +
Sbjct: 426 VLSASASLVALNEGLQI-HSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDV-VE 483

Query: 615 PSVMVWRALL 624
           P+V+ + +++
Sbjct: 484 PNVVSYNSVI 493



 Score = 94.7 bits (234), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 143/348 (41%), Gaps = 68/348 (19%)

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP------ 345
            ++G++  A+  F  M +K+++ W+ M+  YAQ+ +   A +LF  M + +         
Sbjct: 41  GRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTATYNAMIS 100

Query: 346 ----------------------NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
                                 N  ++A+++          L ++++        D    
Sbjct: 101 GYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHEFRDP--V 158

Query: 384 VSNALMDVYAKCGE---------------------------------IENSMILFMESPE 410
            SNAL++ Y K GE                                 I+N+ +LF   PE
Sbjct: 159 CSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPE 218

Query: 411 QNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSVLRACAGFAALDPGLQ 469
           +N V+W+ MI GY++ G  E    LF  M     ++    T + +++ C     +  G+Q
Sbjct: 219 RNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQ 278

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGL 529
           +H L  +  +     ++N +I MY+  G  + A+  F  M  ++ V+WN++I GY  +  
Sbjct: 279 IHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNE 338

Query: 530 STEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQ 577
              A  +F +M + +     +++  ++   +  G + K   LF ++ +
Sbjct: 339 VDAAYEVFERMPEKDL----ISWTAMIRGFATDGRIGKAVELFDTLKE 382



 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 483 IAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM-Q 541
           I   N  I    + G +N A   F++M ++  V+W AM+  Y+ +G  T A  LF++M +
Sbjct: 30  ITECNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPE 89

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKF 601
           +T    N +    + + C+    + K   LF S      +      Y  M+  L +  KF
Sbjct: 90  RTTATYNAMISGYIRNGCN----VTKAYELFTSFHDRNEVS-----YAAMIMGLVKARKF 140

Query: 602 DEAVKLIGEIPFQ 614
           D A KL  E P +
Sbjct: 141 DLAEKLYREAPHE 153


>Medtr4g073930.1 | PPR containing plant-like protein | HC |
           chr4:28099513-28096632 | 20130731
          Length = 597

 Score =  285 bits (728), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/480 (35%), Positives = 261/480 (54%), Gaps = 32/480 (6%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           ++LY    ++  Y K G +  A+  F +MP+KD + W+ M+  YA   R  EAL  +  M
Sbjct: 110 RNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWM 169

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
           R+  V  N FTFASVL  C       L +QIH  V+ VG  SNV VS++++D YAKCG++
Sbjct: 170 RRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKM 229

Query: 399 ENSMILF-----------------------MES--------PEQNEVTWNTMIVGYVQLG 427
           E++M LF                       M+S        P++N  +W  +I GY + G
Sbjct: 230 EDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNG 289

Query: 428 DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN 487
              KA+ +F  MI + ++P E TFSS L ACA  A+L  G Q+H+  ++     +  V +
Sbjct: 290 MAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVS 349

Query: 488 ALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMHGLSTEALNLFNKMQQTNCK 546
           A++DMYAKCG +  AR  F+  +  ++V  WN MI   + +G   EA+ + N M ++  K
Sbjct: 350 AVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVK 409

Query: 547 PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
           PN+ T V +L+ACS++GL+  G   FKSM+ D+ + P +EHY  ++ LLGR G F E++K
Sbjct: 410 PNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAGCFVESMK 469

Query: 607 LIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKR 666
            +  I  +P   V  +LL  C    +I +GR  A+ +++ +PH    + LLS++YA    
Sbjct: 470 DLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQPHSSAAYGLLSSIYAALVT 529

Query: 667 WDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRD 726
           W  V   R  M  + ++++   SW+E +  VH F+V D  HP  + + + L  LN +  D
Sbjct: 530 WGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGLHPLKETLYSALGHLNNQIED 589



 Score =  150 bits (380), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 191/417 (45%), Gaps = 47/417 (11%)

Query: 128 HALHVILRL------FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHAC--------VYK 173
           H L  +LR       +KEG  V+  +  T  K   ++   H+      C        V+ 
Sbjct: 46  HILATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRARKVFD 105

Query: 174 RGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
           +    + +   ++I  Y   G +  AR VF  +  KD VSW  MV  YA    + E+L+ 
Sbjct: 106 KMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRF 165

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGC------------------ALKA 275
           +  MR +    N +T  + L  C+ L+ F + + +HG                   A   
Sbjct: 166 YGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAK 225

Query: 276 C---------YD----QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
           C         +D    +D+   T L+  YA  GD+  A   F +MPKK+   W+ +I  Y
Sbjct: 226 CGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGY 285

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNV 382
           A++  + +AL +F  M    V P+ FTF+S L ACA    L  GKQIH+ +L+  +  N 
Sbjct: 286 ARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNP 345

Query: 383 FVSNALMDVYAKCGEIENSMILF-MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG 441
            V +A++D+YAKCG +E +  +F      Q+ V WNTMI      G G++A+ + + M+ 
Sbjct: 346 VVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLNDMLK 405

Query: 442 NDMQPTEVTFSSVLRACAGFAALDPGLQ-VHSLTIKTRYNNDIAVANALIDMYAKCG 497
           + ++P   T  ++L AC+    +  GLQ   S+T       D+     LID+  + G
Sbjct: 406 SGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAG 462



 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 170/365 (46%), Gaps = 38/365 (10%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           +L++ N +++ YV+   +  A  +F +MP  + +S+  +  G +   +F  AL     + 
Sbjct: 111 NLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMR 170

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVY-------------------KRGHQA 178
           +     N F   +++ + V +    +C  IH  V                    K G   
Sbjct: 171 RVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKME 230

Query: 179 DAF------------VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           DA               T+L+  Y++CG++D+A ++F  +  K+  SWT ++G YA N  
Sbjct: 231 DAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGM 290

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE 286
             ++L +F +M +   RP+ +T ++ L +C  + +   GK +H   L+     +  V + 
Sbjct: 291 AHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSA 350

Query: 287 LLELYAKSGDIVDAQLFF---EEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSV 343
           ++++YAK G +  A+  F   E M  +DV+ W+ MI+  A     KEA+ + + M +S V
Sbjct: 351 VVDMYAKCGSMETARRIFNFTEHM--QDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGV 408

Query: 344 VPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSM 402
            PN  T  ++L AC+   L+  G Q   ++    G+  ++     L+D+  + G    SM
Sbjct: 409 KPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAGCFVESM 468

Query: 403 I-LFM 406
             LFM
Sbjct: 469 KDLFM 473



 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 136/323 (42%), Gaps = 65/323 (20%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFD-- 103
           ++A++L   ++ +     +Q+H  ++  G   ++   + +++ Y +   ++DA +LFD  
Sbjct: 180 TFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDM 239

Query: 104 -----------------------------EMPLTNTISFVTLAQGCSRSHQFDHALHVIL 134
                                        +MP  NT S+  L  G +R+     AL V  
Sbjct: 240 TVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFR 299

Query: 135 RLFKEGHEVNP---------FVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTS 185
           ++    H V P         F C TI  L            IHA + +   + +  V ++
Sbjct: 300 KMIM--HRVRPDEFTFSSCLFACATIASLKHGKQ-------IHAFLLRNNIRPNPVVVSA 350

Query: 186 LIDAYSVCGNVDAARQVFDGI-FCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           ++D Y+ CG+++ AR++F+     +D+V W  M+   A   + +E++ +   M   G +P
Sbjct: 351 VVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKP 410

Query: 245 NNYTITAALKSCL-------GLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
           N  T+ A L +C        GL+ F    + HG         DL     L++L  ++G  
Sbjct: 411 NRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVI------PDLEHYAHLIDLLGRAGCF 464

Query: 298 VDA--QLFFEEMPKKDVIPWSLM 318
           V++   LF  +    D + +SL+
Sbjct: 465 VESMKDLFMIDCKPGDHVLYSLL 487


>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904049 | 20130731
          Length = 654

 Score =  283 bits (725), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/661 (27%), Positives = 322/661 (48%), Gaps = 94/661 (14%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-----LDDASK 100
           ++ +++   +Q R     +QL  ++  R    D+ + N++++ Y  F C     +++  K
Sbjct: 71  TWNSMITGYVQRREIAKARQLFDEMPLR----DIVSWNLIISGY--FSCRGSRFVEEGRK 124

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK-LLVSMD 159
           LFD MP  + +S+ T+  G +++ + D A+ +    F+   E N   C  ++   L++ D
Sbjct: 125 LFDIMPQRDCVSWNTVISGYAKNGRMDQAIEI----FESMPERNVVSCNAVVNGFLLNGD 180

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF-----DGIFCKDMV-S 213
           +           +++  + D+   + L+      G +D A ++      +G    D+V +
Sbjct: 181 VDSAV-----GFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYA 235

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           +  ++  Y +    EE+  +F                  + S  G           G   
Sbjct: 236 YNTLIAGYGQRGMVEEARHVF----------------DGVMSDQG----------EGNEG 269

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K    +++     ++  Y K+GD+V A+  F+ M ++D   W+ +I  Y Q    +EA +
Sbjct: 270 KRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASK 329

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LF  M     +P+  ++ S++                                     ++
Sbjct: 330 LFLEM----PIPDVLSWNSIISG-----------------------------------FS 350

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G+++     F   P +N ++WN++I GY +  D + A+ LFS M     +P   T SS
Sbjct: 351 QIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSS 410

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KR 512
           +L    G   L  G Q+H    KT    D+ + N+LI MY++CG I DAR  F++M   +
Sbjct: 411 ILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYK 469

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + ++WNAMI GY+ HG + +AL LF +M+    +P  +TF+ VL+AC++AGL+++G+  F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
            SM  DY IEP +EH+  +V +LGR G+  EA+ LI  +P +P   VW ALLGAC V  N
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589

Query: 633 IDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           +DL +  A+ ++ ++P     + LL N+YA   +WD+   VR  M+   VKK+ G SW++
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649

Query: 693 N 693
           +
Sbjct: 650 S 650



 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 200/451 (44%), Gaps = 38/451 (8%)

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G + AAR +FD    ++ V+W  M+  Y +     ++ QLF +M +      N  I+  
Sbjct: 51  TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
             SC G      G+ +     +    +D      ++  YAK+G +  A   FE MP+++V
Sbjct: 111 F-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV 165

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA----CAAQVLLILGKQ 368
           +  + ++  +  +     A+  F  M +      +   + +++      AA++L+  G +
Sbjct: 166 VSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNE 225

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF----MESPEQNE---------VT 415
                     D  V+  N L+  Y + G +E +  +F     +  E NE         V+
Sbjct: 226 GDEK------DDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVS 279

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           WN+M++ YV+ GD   A  LF  M+  D      ++++V+    G+  +    +   L +
Sbjct: 280 WNSMMMCYVKAGDVVSARELFDRMVERDA----CSWNTVI---GGYVQIGDMEEASKLFL 332

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           +     D+   N++I  +++ G +   +  F+ M  +  +SWN++I GY  +     A+ 
Sbjct: 333 EMPI-PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIE 391

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           LF++MQ    +P++ T   +LS  +    L  G+ + + +++   + P +     ++ + 
Sbjct: 392 LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK--TVVPDLPINNSLITMY 449

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            R G+  +A  +  E+     V+ W A++G 
Sbjct: 450 SRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480



 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 51/339 (15%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           Q LY   + +    ++G +  A+  F+    ++ + W+ MI  Y Q     +A +LF  M
Sbjct: 36  QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEM 95

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
               +V  N   +    +C     +  G+++      +    +    N ++  YAK G +
Sbjct: 96  PLRDIVSWNLIISGYF-SCRGSRFVEEGRKL----FDIMPQRDCVSWNTVISGYAKNGRM 150

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA- 457
           + ++ +F   PE+N V+ N ++ G++  GD + A+  F  M   D        S ++R  
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210

Query: 458 -----------------------------CAGFAA---LDPGLQVHSLTI---------K 476
                                         AG+     ++    V    +         K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
            R   ++   N+++  Y K G +  AR  FD+M +R+  SWN +I GY   G   EA  L
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           F +M      P+ L++  ++S  S  G L + +  F++M
Sbjct: 331 FLEMP----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365



 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%)

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G +  +  LF  +  +N VTWN+MI GYVQ  +  KA  LF  M   D+    +  S 
Sbjct: 50  RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISG 109

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
              +C G   ++ G ++  +  +     D    N +I  YAK GR++ A   F+ M +R 
Sbjct: 110 YF-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERN 164

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD-KGQSLF 572
            VS NA++ G+ ++G    A+  F KM + +      +  G++S     G LD   + L 
Sbjct: 165 VVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSA----SLSGLVSGLVRNGKLDMAAEILV 220

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
           +  ++    +  +  Y  ++   G+ G  +EA
Sbjct: 221 EYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEA 252


>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904049 | 20130731
          Length = 654

 Score =  283 bits (725), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/661 (27%), Positives = 322/661 (48%), Gaps = 94/661 (14%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-----LDDASK 100
           ++ +++   +Q R     +QL  ++  R    D+ + N++++ Y  F C     +++  K
Sbjct: 71  TWNSMITGYVQRREIAKARQLFDEMPLR----DIVSWNLIISGY--FSCRGSRFVEEGRK 124

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK-LLVSMD 159
           LFD MP  + +S+ T+  G +++ + D A+ +    F+   E N   C  ++   L++ D
Sbjct: 125 LFDIMPQRDCVSWNTVISGYAKNGRMDQAIEI----FESMPERNVVSCNAVVNGFLLNGD 180

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF-----DGIFCKDMV-S 213
           +           +++  + D+   + L+      G +D A ++      +G    D+V +
Sbjct: 181 VDSAV-----GFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYA 235

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           +  ++  Y +    EE+  +F                  + S  G           G   
Sbjct: 236 YNTLIAGYGQRGMVEEARHVF----------------DGVMSDQG----------EGNEG 269

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K    +++     ++  Y K+GD+V A+  F+ M ++D   W+ +I  Y Q    +EA +
Sbjct: 270 KRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASK 329

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LF  M     +P+  ++ S++                                     ++
Sbjct: 330 LFLEM----PIPDVLSWNSIISG-----------------------------------FS 350

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G+++     F   P +N ++WN++I GY +  D + A+ LFS M     +P   T SS
Sbjct: 351 QIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSS 410

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KR 512
           +L    G   L  G Q+H    KT    D+ + N+LI MY++CG I DAR  F++M   +
Sbjct: 411 ILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYK 469

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + ++WNAMI GY+ HG + +AL LF +M+    +P  +TF+ VL+AC++AGL+++G+  F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
            SM  DY IEP +EH+  +V +LGR G+  EA+ LI  +P +P   VW ALLGAC V  N
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589

Query: 633 IDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           +DL +  A+ ++ ++P     + LL N+YA   +WD+   VR  M+   VKK+ G SW++
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649

Query: 693 N 693
           +
Sbjct: 650 S 650



 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 200/451 (44%), Gaps = 38/451 (8%)

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G + AAR +FD    ++ V+W  M+  Y +     ++ QLF +M +      N  I+  
Sbjct: 51  TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
             SC G      G+ +     +    +D      ++  YAK+G +  A   FE MP+++V
Sbjct: 111 F-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV 165

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA----CAAQVLLILGKQ 368
           +  + ++  +  +     A+  F  M +      +   + +++      AA++L+  G +
Sbjct: 166 VSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNE 225

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF----MESPEQNE---------VT 415
                     D  V+  N L+  Y + G +E +  +F     +  E NE         V+
Sbjct: 226 GDEK------DDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVS 279

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           WN+M++ YV+ GD   A  LF  M+  D      ++++V+    G+  +    +   L +
Sbjct: 280 WNSMMMCYVKAGDVVSARELFDRMVERDA----CSWNTVI---GGYVQIGDMEEASKLFL 332

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           +     D+   N++I  +++ G +   +  F+ M  +  +SWN++I GY  +     A+ 
Sbjct: 333 EMPI-PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIE 391

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           LF++MQ    +P++ T   +LS  +    L  G+ + + +++   + P +     ++ + 
Sbjct: 392 LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK--TVVPDLPINNSLITMY 449

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            R G+  +A  +  E+     V+ W A++G 
Sbjct: 450 SRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480



 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 51/339 (15%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           Q LY   + +    ++G +  A+  F+    ++ + W+ MI  Y Q     +A +LF  M
Sbjct: 36  QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEM 95

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
               +V  N   +    +C     +  G+++      +    +    N ++  YAK G +
Sbjct: 96  PLRDIVSWNLIISGYF-SCRGSRFVEEGRKL----FDIMPQRDCVSWNTVISGYAKNGRM 150

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA- 457
           + ++ +F   PE+N V+ N ++ G++  GD + A+  F  M   D        S ++R  
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210

Query: 458 -----------------------------CAGFAA---LDPGLQVHSLTI---------K 476
                                         AG+     ++    V    +         K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
            R   ++   N+++  Y K G +  AR  FD+M +R+  SWN +I GY   G   EA  L
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           F +M      P+ L++  ++S  S  G L + +  F++M
Sbjct: 331 FLEMP----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365



 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%)

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G +  +  LF  +  +N VTWN+MI GYVQ  +  KA  LF  M   D+    +  S 
Sbjct: 50  RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISG 109

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
              +C G   ++ G ++  +  +     D    N +I  YAK GR++ A   F+ M +R 
Sbjct: 110 YF-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERN 164

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD-KGQSLF 572
            VS NA++ G+ ++G    A+  F KM + +      +  G++S     G LD   + L 
Sbjct: 165 VVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSA----SLSGLVSGLVRNGKLDMAAEILV 220

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
           +  ++    +  +  Y  ++   G+ G  +EA
Sbjct: 221 EYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEA 252


>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904066 | 20130731
          Length = 654

 Score =  283 bits (725), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/661 (27%), Positives = 322/661 (48%), Gaps = 94/661 (14%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-----LDDASK 100
           ++ +++   +Q R     +QL  ++  R    D+ + N++++ Y  F C     +++  K
Sbjct: 71  TWNSMITGYVQRREIAKARQLFDEMPLR----DIVSWNLIISGY--FSCRGSRFVEEGRK 124

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK-LLVSMD 159
           LFD MP  + +S+ T+  G +++ + D A+ +    F+   E N   C  ++   L++ D
Sbjct: 125 LFDIMPQRDCVSWNTVISGYAKNGRMDQAIEI----FESMPERNVVSCNAVVNGFLLNGD 180

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF-----DGIFCKDMV-S 213
           +           +++  + D+   + L+      G +D A ++      +G    D+V +
Sbjct: 181 VDSAV-----GFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYA 235

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           +  ++  Y +    EE+  +F                  + S  G           G   
Sbjct: 236 YNTLIAGYGQRGMVEEARHVF----------------DGVMSDQG----------EGNEG 269

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K    +++     ++  Y K+GD+V A+  F+ M ++D   W+ +I  Y Q    +EA +
Sbjct: 270 KRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASK 329

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LF  M     +P+  ++ S++                                     ++
Sbjct: 330 LFLEM----PIPDVLSWNSIISG-----------------------------------FS 350

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G+++     F   P +N ++WN++I GY +  D + A+ LFS M     +P   T SS
Sbjct: 351 QIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSS 410

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KR 512
           +L    G   L  G Q+H    KT    D+ + N+LI MY++CG I DAR  F++M   +
Sbjct: 411 ILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYK 469

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + ++WNAMI GY+ HG + +AL LF +M+    +P  +TF+ VL+AC++AGL+++G+  F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
            SM  DY IEP +EH+  +V +LGR G+  EA+ LI  +P +P   VW ALLGAC V  N
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589

Query: 633 IDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           +DL +  A+ ++ ++P     + LL N+YA   +WD+   VR  M+   VKK+ G SW++
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649

Query: 693 N 693
           +
Sbjct: 650 S 650



 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 200/451 (44%), Gaps = 38/451 (8%)

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G + AAR +FD    ++ V+W  M+  Y +     ++ QLF +M +      N  I+  
Sbjct: 51  TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
             SC G      G+ +     +    +D      ++  YAK+G +  A   FE MP+++V
Sbjct: 111 F-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV 165

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA----CAAQVLLILGKQ 368
           +  + ++  +  +     A+  F  M +      +   + +++      AA++L+  G +
Sbjct: 166 VSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNE 225

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF----MESPEQNE---------VT 415
                     D  V+  N L+  Y + G +E +  +F     +  E NE         V+
Sbjct: 226 GDEK------DDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVS 279

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           WN+M++ YV+ GD   A  LF  M+  D      ++++V+    G+  +    +   L +
Sbjct: 280 WNSMMMCYVKAGDVVSARELFDRMVERDA----CSWNTVI---GGYVQIGDMEEASKLFL 332

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           +     D+   N++I  +++ G +   +  F+ M  +  +SWN++I GY  +     A+ 
Sbjct: 333 EMPI-PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIE 391

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           LF++MQ    +P++ T   +LS  +    L  G+ + + +++   + P +     ++ + 
Sbjct: 392 LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK--TVVPDLPINNSLITMY 449

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            R G+  +A  +  E+     V+ W A++G 
Sbjct: 450 SRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480



 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 51/339 (15%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           Q LY   + +    ++G +  A+  F+    ++ + W+ MI  Y Q     +A +LF  M
Sbjct: 36  QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEM 95

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
               +V  N   +    +C     +  G+++      +    +    N ++  YAK G +
Sbjct: 96  PLRDIVSWNLIISGYF-SCRGSRFVEEGRKL----FDIMPQRDCVSWNTVISGYAKNGRM 150

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA- 457
           + ++ +F   PE+N V+ N ++ G++  GD + A+  F  M   D        S ++R  
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210

Query: 458 -----------------------------CAGFAA---LDPGLQVHSLTI---------K 476
                                         AG+     ++    V    +         K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
            R   ++   N+++  Y K G +  AR  FD+M +R+  SWN +I GY   G   EA  L
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           F +M      P+ L++  ++S  S  G L + +  F++M
Sbjct: 331 FLEMP----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365



 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%)

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G +  +  LF  +  +N VTWN+MI GYVQ  +  KA  LF  M   D+    +  S 
Sbjct: 50  RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISG 109

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
              +C G   ++ G ++  +  +     D    N +I  YAK GR++ A   F+ M +R 
Sbjct: 110 YF-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERN 164

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD-KGQSLF 572
            VS NA++ G+ ++G    A+  F KM + +      +  G++S     G LD   + L 
Sbjct: 165 VVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSA----SLSGLVSGLVRNGKLDMAAEILV 220

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
           +  ++    +  +  Y  ++   G+ G  +EA
Sbjct: 221 EYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEA 252


>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904049 | 20130731
          Length = 654

 Score =  283 bits (725), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/661 (27%), Positives = 322/661 (48%), Gaps = 94/661 (14%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-----LDDASK 100
           ++ +++   +Q R     +QL  ++  R    D+ + N++++ Y  F C     +++  K
Sbjct: 71  TWNSMITGYVQRREIAKARQLFDEMPLR----DIVSWNLIISGY--FSCRGSRFVEEGRK 124

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK-LLVSMD 159
           LFD MP  + +S+ T+  G +++ + D A+ +    F+   E N   C  ++   L++ D
Sbjct: 125 LFDIMPQRDCVSWNTVISGYAKNGRMDQAIEI----FESMPERNVVSCNAVVNGFLLNGD 180

Query: 160 LPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF-----DGIFCKDMV-S 213
           +           +++  + D+   + L+      G +D A ++      +G    D+V +
Sbjct: 181 VDSAV-----GFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYA 235

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           +  ++  Y +    EE+  +F                  + S  G           G   
Sbjct: 236 YNTLIAGYGQRGMVEEARHVF----------------DGVMSDQG----------EGNEG 269

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K    +++     ++  Y K+GD+V A+  F+ M ++D   W+ +I  Y Q    +EA +
Sbjct: 270 KRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASK 329

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           LF  M     +P+  ++ S++                                     ++
Sbjct: 330 LFLEM----PIPDVLSWNSIISG-----------------------------------FS 350

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G+++     F   P +N ++WN++I GY +  D + A+ LFS M     +P   T SS
Sbjct: 351 QIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSS 410

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KR 512
           +L    G   L  G Q+H    KT    D+ + N+LI MY++CG I DAR  F++M   +
Sbjct: 411 ILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYK 469

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + ++WNAMI GY+ HG + +AL LF +M+    +P  +TF+ VL+AC++AGL+++G+  F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
            SM  DY IEP +EH+  +V +LGR G+  EA+ LI  +P +P   VW ALLGAC V  N
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589

Query: 633 IDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           +DL +  A+ ++ ++P     + LL N+YA   +WD+   VR  M+   VKK+ G SW++
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649

Query: 693 N 693
           +
Sbjct: 650 S 650



 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 200/451 (44%), Gaps = 38/451 (8%)

Query: 193 CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
            G + AAR +FD    ++ V+W  M+  Y +     ++ QLF +M +      N  I+  
Sbjct: 51  TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
             SC G      G+ +     +    +D      ++  YAK+G +  A   FE MP+++V
Sbjct: 111 F-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV 165

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQA----CAAQVLLILGKQ 368
           +  + ++  +  +     A+  F  M +      +   + +++      AA++L+  G +
Sbjct: 166 VSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNE 225

Query: 369 IHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF----MESPEQNE---------VT 415
                     D  V+  N L+  Y + G +E +  +F     +  E NE         V+
Sbjct: 226 GDEK------DDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVS 279

Query: 416 WNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
           WN+M++ YV+ GD   A  LF  M+  D      ++++V+    G+  +    +   L +
Sbjct: 280 WNSMMMCYVKAGDVVSARELFDRMVERDA----CSWNTVI---GGYVQIGDMEEASKLFL 332

Query: 476 KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALN 535
           +     D+   N++I  +++ G +   +  F+ M  +  +SWN++I GY  +     A+ 
Sbjct: 333 EMPI-PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIE 391

Query: 536 LFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLL 595
           LF++MQ    +P++ T   +LS  +    L  G+ + + +++   + P +     ++ + 
Sbjct: 392 LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK--TVVPDLPINNSLITMY 449

Query: 596 GRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            R G+  +A  +  E+     V+ W A++G 
Sbjct: 450 SRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480



 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 51/339 (15%)

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
           Q LY   + +    ++G +  A+  F+    ++ + W+ MI  Y Q     +A +LF  M
Sbjct: 36  QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEM 95

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
               +V  N   +    +C     +  G+++      +    +    N ++  YAK G +
Sbjct: 96  PLRDIVSWNLIISGYF-SCRGSRFVEEGRKL----FDIMPQRDCVSWNTVISGYAKNGRM 150

Query: 399 ENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA- 457
           + ++ +F   PE+N V+ N ++ G++  GD + A+  F  M   D        S ++R  
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210

Query: 458 -----------------------------CAGFAA---LDPGLQVHSLTI---------K 476
                                         AG+     ++    V    +         K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
            R   ++   N+++  Y K G +  AR  FD+M +R+  SWN +I GY   G   EA  L
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSM 575
           F +M      P+ L++  ++S  S  G L + +  F++M
Sbjct: 331 FLEMP----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365



 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%)

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           + G +  +  LF  +  +N VTWN+MI GYVQ  +  KA  LF  M   D+    +  S 
Sbjct: 50  RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISG 109

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
              +C G   ++ G ++  +  +     D    N +I  YAK GR++ A   F+ M +R 
Sbjct: 110 YF-SCRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERN 164

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD-KGQSLF 572
            VS NA++ G+ ++G    A+  F KM + +      +  G++S     G LD   + L 
Sbjct: 165 VVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSA----SLSGLVSGLVRNGKLDMAAEILV 220

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEA 604
           +  ++    +  +  Y  ++   G+ G  +EA
Sbjct: 221 EYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEA 252


>Medtr7g032360.1 | PPR containing plant-like protein | HC |
           chr7:11369613-11371524 | 20130731
          Length = 541

 Score =  282 bits (722), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 168/515 (32%), Positives = 278/515 (53%), Gaps = 53/515 (10%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKA----CYDQDLYVGTELLEL--YAKSGDIVDAQ 301
           T++  ++ C  L+     K +H   LK+      DQ  Y+ T LL    ++       A 
Sbjct: 21  TLSTLIEQCKNLKEI---KIIHTHILKSPILHTRDQ-YYLFTRLLYFCSFSNYASFNYAN 76

Query: 302 LFFEEMPKKDVIPWSLMIARYA------QSDRSKEALELFHCMRQSSVVPNNFTFASVLQ 355
             F  +   ++  +++MI  Y        S+   +AL L+  M    +VPNN TF  +++
Sbjct: 77  NVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVK 136

Query: 356 ACAA-QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV 414
            C+  Q    +G+ IH++VLK G  ++VFV N+L+ ++   G  +N+  +F E   ++ V
Sbjct: 137 GCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVV 196

Query: 415 TWNTMIVGYVQLGDGEKAMNLFSSMIGNDM------------------------------ 444
           +WN+M+VGY++ G+ E A+NLF  M G ++                              
Sbjct: 197 SWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLS 256

Query: 445 -----QPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRI 499
                +P ++T +SVL ACA   ++D G  VH+   K     D+ +  AL++MY KCG +
Sbjct: 257 GDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDV 316

Query: 500 NDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSAC 559
             A   F+ M +++  +W AMI  +++HG   +A + F +M++   KPN +TFVG+LSAC
Sbjct: 317 QQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSAC 376

Query: 560 SNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMV 619
           S++GL+++G+  F  M + Y+IEP I HY CMV +L R   FDEA+ LI  +P +P V V
Sbjct: 377 SHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYV 436

Query: 620 WRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKR 679
           W ALLG C +  NI LG   A ++++++PH+   ++ L ++Y  A ++D    +R +MK 
Sbjct: 437 WGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKE 496

Query: 680 KGVK-KEPGLSWVENQGVVHYFSVGDTSHPDNKLI 713
           +G++ K PG S +E  GVV  FSVG+    +  L+
Sbjct: 497 RGIETKIPGCSIIEINGVVQEFSVGEIPMKELPLV 531



 Score =  123 bits (309), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 162/382 (42%), Gaps = 69/382 (18%)

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            IHA V K G   D FVG SLI  +   G    AR+VFD +F +D+VSW  MV  Y  N 
Sbjct: 150 VIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNG 209

Query: 226 FYE-------------------------------ESLQLFCQMRVMG----YRPNNYTIT 250
             E                               ESL++F +M+ +      +P+  TI 
Sbjct: 210 EVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIA 269

Query: 251 AALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK 310
           + L +C  L +   GK VH    K   + D+ +GT L+ +Y K GD+  A   F +MP+K
Sbjct: 270 SVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEK 329

Query: 311 DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIH 370
           D   W+ MI+ +A     K+A + F  M ++ V PN+ TF  +L AC+           H
Sbjct: 330 DASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACS-----------H 378

Query: 371 SNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGE 430
           S +++ G            DV  +   IE         P+         I+   +L D  
Sbjct: 379 SGLVEQG--------RCCFDVMKRVYSIE---------PQIYHYACMVDILSRARLFD-- 419

Query: 431 KAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALI 490
           +A+ L  SM    M+P    + ++L  C     +  G +V    I    +N     N L 
Sbjct: 420 EALFLIRSM---PMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYIN-LC 475

Query: 491 DMYAKCGRINDARLTFDKMDKR 512
           D+Y K G+ + A+   + M +R
Sbjct: 476 DIYVKAGKYDAAKRIRNSMKER 497



 Score = 90.9 bits (224), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 172/387 (44%), Gaps = 85/387 (21%)

Query: 62  AGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
            G+ +H  +LK G   D+F  N L++ ++ F    +A K+FDEM + + +S+ ++  G  
Sbjct: 147 VGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYL 206

Query: 122 RSHQFDHALH---------------VILRLFKEG---------HEVNPFVCTTIIK---- 153
           R+ + + AL+               +I  L + G         HE+       ++K    
Sbjct: 207 RNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKI 266

Query: 154 ----------LLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF 203
                     LL S+D  H  W +HA + K   + D  +GT+L++ Y  CG+V  A ++F
Sbjct: 267 TIASVLSACALLGSID--HGKW-VHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIF 323

Query: 204 DGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC--LGLEA 261
           + +  KD  +WT M+  +A + F +++   F +M   G +PN+ T    L +C   GL  
Sbjct: 324 NDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVE 383

Query: 262 FGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIAR 321
            G          + C+D        +  +Y+     ++ Q++           ++ M+  
Sbjct: 384 QG----------RCCFDV-------MKRVYS-----IEPQIYH----------YACMVDI 411

Query: 322 YAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSN 381
            +++    EAL L   +R   + P+ + + ++L  C     + LG+++   ++ +   ++
Sbjct: 412 LSRARLFDEALFL---IRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNH 468

Query: 382 VFVSNALMDVYAKCGE------IENSM 402
            F  N L D+Y K G+      I NSM
Sbjct: 469 AFYIN-LCDIYVKAGKYDAAKRIRNSM 494


>Medtr2g016780.1 | editing factor, putative | HC |
           chr2:5197710-5195940 | 20130731
          Length = 551

 Score =  281 bits (720), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 163/522 (31%), Positives = 261/522 (50%), Gaps = 73/522 (13%)

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD-LYVGTELLELYAKSGDIVDA 300
           + PN++ +   L+ CL  +A   GK +H   L    + + L + ++L+ +Y+   D+  A
Sbjct: 12  WTPNDFALY--LQKCLKSKALKPGKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKSA 69

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
            L F  + K +V  ++ MI     +     AL  F  MR   ++ N FTF  V++ C   
Sbjct: 70  TLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGL 129

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCG------------------------ 396
           + +  GKQ+H  + ++GL ++V + N L+D+Y KCG                        
Sbjct: 130 MDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMI 189

Query: 397 -------EIENSMILF----MESPEQNEVTWNTMIVGYVQLGDGEKAM------------ 433
                   IE +++LF    ME  E N+ TWN +I  Y +LGD +KA             
Sbjct: 190 CGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFI 249

Query: 434 -----------------------NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQV 470
                                   +F  M+ + + P +VT +++L AC    ++  G +V
Sbjct: 250 PDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREV 309

Query: 471 HSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLS 530
           H    +  ++ ++ +A+ALIDMY+KCG + DAR  FDK+  +   SWNAMI  +   G+ 
Sbjct: 310 HGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMV 369

Query: 531 TEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTC 590
             AL LF KM++   +PN++TF  +LSACS++G ++KG  +F  M + Y +E C EHY C
Sbjct: 370 DSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYAC 429

Query: 591 MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHD 650
           +V LL R GK  EA + I  +P Q +  +  A L  C +    DL +  A+ ++ M+ + 
Sbjct: 430 IVDLLCRSGKIVEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNG 489

Query: 651 DGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
            G+ V LSN+YA    W+   +VRK MK + V K PG SW+E
Sbjct: 490 SGSFVTLSNIYAAEGDWEEAGNVRKVMKERNVNKWPGSSWLE 531



 Score =  209 bits (531), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 235/471 (49%), Gaps = 43/471 (9%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFA-HNILLNFYVQFDCLDD 97
           Q     + +A  LQ+ ++++    GKQ+H  +L  G   ++ +  + L+  Y     L  
Sbjct: 9   QLKWTPNDFALYLQKCLKSKALKPGKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKS 68

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
           A+ LF  +   N  +F  +  G   +  FD+AL     +   G   N F    +IK  V 
Sbjct: 69  ATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVG 128

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGM 217
           +        +H  + + G   D  +G  LID Y  CG+VD A +VFDG+  +D+ SWT M
Sbjct: 129 LMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSM 188

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY 277
           +  +      EE+L LF +M++ GY PN++T  A                          
Sbjct: 189 ICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNA-------------------------- 222

Query: 278 DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKK----DVIPWSLMIARYAQSDRSKEALE 333
                    ++  YA+ GD   A  F E M K+    DV+ W+ +I+ +AQ+ + +E   
Sbjct: 223 ---------IIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFT 273

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
           +F  M  S + PN  T A++L AC +   +  G+++H  + + G D+NVF+++AL+D+Y+
Sbjct: 274 VFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYS 333

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           KCG ++++  +F +   +N  +WN MI  + + G  + A+ LF+ M    +QP EVTF+ 
Sbjct: 334 KCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFAC 393

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDA 502
           +L AC+   +++ GL++ +L +K  Y  +I   +   ++D+  + G+I +A
Sbjct: 394 ILSACSHSGSVEKGLEIFTL-MKECYGVEICKEHYACIVDLLCRSGKIVEA 443



 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 438 SMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI-AVANALIDMYAKC 496
           S   + ++ T   F+  L+ C    AL PG Q+H++ + T  N +I ++++ L+ MY+ C
Sbjct: 4   STFSSQLKWTPNDFALYLQKCLKSKALKPGKQIHAMLLTTGTNTNILSLSSKLVGMYSSC 63

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
             +  A L F  + K    ++N MI G   +G    AL  F  M+      NK TF  V+
Sbjct: 64  TDLKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVI 123

Query: 557 SACSNAGLLD 566
             C   GL+D
Sbjct: 124 KTC--VGLMD 131


>Medtr2g026210.1 | PPR containing plant-like protein | HC |
           chr2:9478558-9480181 | 20130731
          Length = 467

 Score =  281 bits (720), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/359 (38%), Positives = 212/359 (59%)

Query: 349 TFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMES 408
           T++ +LQ C        G++IH++++ VG   N ++   L+ +YAK G +E +  LF   
Sbjct: 56  TYSLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNL 115

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
            E++   WN MI GYVQ G  E  +  F  M    ++P + TF+SV RACA  A L+PG 
Sbjct: 116 VEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGR 175

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           Q H + +K +  +++ V +ALIDMY KC  I D RL FDK   R  ++W  +I GY  HG
Sbjct: 176 QAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHG 235

Query: 529 LSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHY 588
              E L+ F++M   + +PN +TF+ VL ACS+ GL+D+    F+SM +DY + P  +HY
Sbjct: 236 QVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHY 295

Query: 589 TCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKP 648
             MV LLGR GK  EA + + + P++   ++W ALLGAC +  ++DL +  ++   E + 
Sbjct: 296 AAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIHGDLDLLKIASKKYFEFER 355

Query: 649 HDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSH 707
            + G +V+L+N YA +  WD+V  VR +++  GV KEPG S +E Q  V +F  GD  H
Sbjct: 356 VNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGYSRIEVQKEVSFFFNGDKYH 414



 Score =  167 bits (422), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
           P  Y++   L+ C+  + +G G+ +H   +   Y  + Y+  +LL LYAKSG +  AQ  
Sbjct: 54  PRTYSLM--LQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFL 111

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           F  + +KD   W+ MIA Y Q    +  LE F+ MRQ+S+ P+ +TFASV +ACA   LL
Sbjct: 112 FNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALL 171

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
             G+Q H  +LK  +  NV V++AL+D+Y KC  I +  +LF +   +N +TW T+I GY
Sbjct: 172 EPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGY 231

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDI 483
            + G   + ++ F  MI    +P  VTF +VL AC+    +D   +     I+       
Sbjct: 232 GKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPH 291

Query: 484 AV-ANALIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQ 541
           A    A++D+  + G++ +A         K   V W A++    +HG   + L + +K  
Sbjct: 292 AKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIHG-DLDLLKIASKKY 350

Query: 542 QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQD 578
               + N   +V + +A +++GL D  + +  S+ + 
Sbjct: 351 FEFERVNTGKYVVLANAYASSGLWDDVEEVRASLRES 387



 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 151/314 (48%), Gaps = 5/314 (1%)

Query: 109 NTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIH 168
           NT +   + QG   S + + A+ +   L++ G  V+P   + +++  +          IH
Sbjct: 21  NTQNLDKVLQGLCVSGKLEDAIRL---LYRTGFPVHPRTYSLMLQECIFWKNYGRGRRIH 77

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYE 228
           A +   G+  + ++   L+  Y+  G ++ A+ +F+ +  KD  +W  M+  Y +    E
Sbjct: 78  AHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEE 137

Query: 229 ESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELL 288
             L+ F +MR    RP+ YT  +  ++C  L     G+  HG  LK     ++ V + L+
Sbjct: 138 VGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALI 197

Query: 289 ELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNF 348
           ++Y K   I D +L F++   ++ I W+ +I+ Y +  +  E L+ FH M   S  PN  
Sbjct: 198 DMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYV 257

Query: 349 TFASVLQACAAQVLLILG-KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
           TF +VL AC+   L+    K   S +    +  +     A++D+  + G+++ +    ++
Sbjct: 258 TFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLK 317

Query: 408 SP-EQNEVTWNTMI 420
           SP +++ V W  ++
Sbjct: 318 SPYKEHSVIWGALL 331



 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/289 (20%), Positives = 127/289 (43%), Gaps = 16/289 (5%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P+   +Y+ +LQ+ I  ++   G+++H  ++  G   + +    LL  Y +  CL+ A  
Sbjct: 51  PVHPRTYSLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQF 110

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           LF+ +   ++ ++  +  G  +    +  L     + +     + +   ++ +   ++ L
Sbjct: 111 LFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLAL 170

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
                  H  + K     +  V ++LID Y  C  +   R +FD    ++ ++WT ++  
Sbjct: 171 LEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISG 230

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC--LGL--EAFGVGKSVHGCALKAC 276
           Y ++    E L  F +M    +RPN  T  A L +C  +GL  EA+   +S+        
Sbjct: 231 YGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSM-------I 283

Query: 277 YDQDLYVGTE----LLELYAKSGDIVDAQLFFEEMPKKD-VIPWSLMIA 320
            D ++    +    +++L  +SG + +A  F  + P K+  + W  ++ 
Sbjct: 284 RDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLG 332


>Medtr5g031630.1 | PPR containing plant-like protein, putative | HC
           | chr5:13562181-13560603 | 20130731
          Length = 504

 Score =  280 bits (716), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 160/479 (33%), Positives = 252/479 (52%), Gaps = 55/479 (11%)

Query: 265 GKSVHGCALKACYD-QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYA 323
           G+  HG A+   ++  D +V T ++++Y K G + DAQ  F+ +  KDV+ ++ +I  Y 
Sbjct: 7   GQKAHGLAVVLGFEVSDGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGYN 66

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
           Q     EALE+F  M    V PN +T ASVL +C     L+ GK IH  V+K GL+S + 
Sbjct: 67  QHGLDGEALEVFEEMVGRRVKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIA 126

Query: 384 VSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
              +L+ +Y+KC  +E+S+ +F +    + VT  + IVG VQ G  E A+++F  MI   
Sbjct: 127 SQTSLLTMYSKCSMVEDSIKVFNQLSYASHVTCTSFIVGLVQNGREEVALSMFREMIRCS 186

Query: 444 MQPTEVTF---------------------------------------------------S 452
           + P   T+                                                    
Sbjct: 187 ISPNHFTYLVFFMLERVDQMEESQVKRGRGRPKKTIRETIRKDLEPTPLSGIRLVCCCCC 246

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
           S+L AC+  A L+ G ++H++T+K   N    V  ALI +Y KCG +  AR  FD + + 
Sbjct: 247 SILHACSSLAMLEAGEKIHAVTVKLGGNK--YVDAALIHLYGKCGNVEKARSVFDSLTEL 304

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + VS N MI  Y+ +G   EAL LF ++++   +PN +TF+ +L AC+NAGL+++G  +F
Sbjct: 305 DVVSINTMIYAYAQNGFGHEALELFKRLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 364

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
             +  +++IE   +HYTCM+ LLGR  +F+EA  LI E    P V+ WR LL AC +   
Sbjct: 365 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGE-NPDVVQWRTLLNACKIHGE 423

Query: 633 IDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
           +++     + +L   P D  TH+LL+N+YA A +WDNV  ++   +   +KK P +SW+
Sbjct: 424 VEMAEKFMRKMLNQAPRDGETHILLTNIYASAGKWDNVIEMKSAGRDLRLKKSPAMSWL 482



 Score =  162 bits (409), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 191/418 (45%), Gaps = 60/418 (14%)

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
           +D FV T ++D Y+  G +  A+ VFD +  KD+V +T ++  Y ++    E+L++F +M
Sbjct: 22  SDGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEEM 81

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
                +PN YT+ + L SC  L     GK +HG  +K+  +  +   T LL +Y+K   +
Sbjct: 82  VGRRVKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIASQTSLLTMYSKCSMV 141

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTF------- 350
            D+   F ++     +  +  I    Q+ R + AL +F  M + S+ PN+FT+       
Sbjct: 142 EDSIKVFNQLSYASHVTCTSFIVGLVQNGREEVALSMFREMIRCSISPNHFTYLVFFMLE 201

Query: 351 --------------------------------------------ASVLQACAAQVLLILG 366
                                                        S+L AC++  +L  G
Sbjct: 202 RVDQMEESQVKRGRGRPKKTIRETIRKDLEPTPLSGIRLVCCCCCSILHACSSLAMLEAG 261

Query: 367 KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           ++IH+  +K+G   N +V  AL+ +Y KCG +E +  +F    E + V+ NTMI  Y Q 
Sbjct: 262 EKIHAVTVKLG--GNKYVDAALIHLYGKCGNVEKARSVFDSLTELDVVSINTMIYAYAQN 319

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVA 486
           G G +A+ LF  +    ++P  VTF S+L AC     ++ G Q+ SL    R N+ I + 
Sbjct: 320 GFGHEALELFKRLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSL---IRNNHSIELT 376

Query: 487 ----NALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
                 +ID+  +  R  +A +  ++ +  + V W  ++    +HG    A     KM
Sbjct: 377 RDHYTCMIDLLGRAKRFEEAAMLIEEGENPDVVQWRTLLNACKIHGEVEMAEKFMRKM 434



 Score = 93.6 bits (231), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 169/421 (40%), Gaps = 66/421 (15%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           D F    +++ Y +F  + DA  +FD +   + + F  L  G ++ H  D      L +F
Sbjct: 23  DGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGYNQ-HGLDGE---ALEVF 78

Query: 138 KE--GHEVNPFVCTTIIKLLVSMDLPHVC--WTIHACVYKRGHQADAFVGTSLIDAYSVC 193
           +E  G  V P   T    L+   +L  +     IH  V K G ++     TSL+  YS C
Sbjct: 79  EEMVGRRVKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIASQTSLLTMYSKC 138

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTIT--- 250
             V+ + +VF+ +     V+ T  +    +N   E +L +F +M      PN++T     
Sbjct: 139 SMVEDSIKVFNQLSYASHVTCTSFIVGLVQNGREEVALSMFREMIRCSISPNHFTYLVFF 198

Query: 251 ------------------------------------------------AALKSCLGLEAF 262
                                                           + L +C  L   
Sbjct: 199 MLERVDQMEESQVKRGRGRPKKTIRETIRKDLEPTPLSGIRLVCCCCCSILHACSSLAML 258

Query: 263 GVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARY 322
             G+ +H   +K   ++  YV   L+ LY K G++  A+  F+ + + DV+  + MI  Y
Sbjct: 259 EAGEKIHAVTVKLGGNK--YVDAALIHLYGKCGNVEKARSVFDSLTELDVVSINTMIYAY 316

Query: 323 AQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHS---NVLKVGLD 379
           AQ+    EALELF  +++  + PN  TF S+L AC    L+  G QI S   N   + L 
Sbjct: 317 AQNGFGHEALELFKRLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 376

Query: 380 SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM 439
            + +    ++D+  +    E + +L  E    + V W T++      G+ E A      M
Sbjct: 377 RDHY--TCMIDLLGRAKRFEEAAMLIEEGENPDVVQWRTLLNACKIHGEVEMAEKFMRKM 434

Query: 440 I 440
           +
Sbjct: 435 L 435



 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 2/166 (1%)

Query: 461 FAALDPGLQVHSLTIKTRYN-NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNA 519
              L  G + H L +   +  +D  VA  ++DMY K G++ DA+  FD++  ++ V + A
Sbjct: 1   MGVLREGQKAHGLAVVLGFEVSDGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTA 60

Query: 520 MICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDY 579
           +I GY+ HGL  EAL +F +M     KPN+ T   VL +C N G L  G+ L   +    
Sbjct: 61  LIVGYNQHGLDGEALEVFEEMVGRRVKPNEYTLASVLVSCGNLGDLVNGK-LIHGLVVKS 119

Query: 580 NIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLG 625
            +E  I   T ++ +  +    ++++K+  ++ +   V     ++G
Sbjct: 120 GLESVIASQTSLLTMYSKCSMVEDSIKVFNQLSYASHVTCTSFIVG 165


>Medtr5g012660.1 | PPR containing plant-like protein | HC |
           chr5:3861054-3862731 | 20130731
          Length = 519

 Score =  280 bits (715), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 165/529 (31%), Positives = 281/529 (53%), Gaps = 42/529 (7%)

Query: 167 IHACVYKRGH-QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
           IH+   + G+  A+ +V T+LI  Y        A  +F  I   ++VSW  ++  Y    
Sbjct: 27  IHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAG 86

Query: 226 FYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGT 285
            ++++L LF ++       + ++ T+A+ +C  L    +G S+H   +K   D +  V  
Sbjct: 87  QFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVAN 146

Query: 286 ELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVP 345
            L+++Y K G +  A   F ++  KDVI W+                             
Sbjct: 147 CLIDMYGKCGSVERAVRIFSDIADKDVISWN----------------------------- 177

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
                 SV+ ACA    + LG +     L++  + +V   N L++  A+ G+IE+++ + 
Sbjct: 178 ------SVIAACANNGNIGLGFKF----LQLMPNPDVVSYNGLINGIAQAGKIEDAVRIL 227

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
              P  N  +WN++I G+V      +A+ +F  M   ++Q  E TFS +L   A  +AL 
Sbjct: 228 STMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALT 287

Query: 466 PGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYS 525
            G+ +H  TIK   ++ I V ++LIDMY+KCG++NDA   F+ +  R  VSWNAMI GY+
Sbjct: 288 WGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYA 347

Query: 526 MHGLSTEALNLFNKMQ-QTNCKPNKLTFVGVLSACSNAGL-LDKGQSLFKSMSQDYNIEP 583
            +G S +A++LF  ++ + + KP+ +TF+ V+SACS++ +  + G   F +M  +Y I P
Sbjct: 348 RNGDSAQAISLFELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFDAMINEYGIAP 407

Query: 584 CIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
            I+H   M+ L+G+ G+   A K+I E+ F+   +VWR+LL AC  Q+++ +    A  V
Sbjct: 408 SIKHCCSMIRLMGQKGELSRAQKMIHELGFESCGVVWRSLLAACGTQEDLHVAEIAAAKV 467

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
           + ++  +D  +V+LSNMYA   RW++V  +R  M +K V+KE G SW+E
Sbjct: 468 IGLERDEDYVYVMLSNMYASFGRWEDVNVIRSLMSKKRVRKEAGSSWIE 516



 Score =  164 bits (414), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 41/399 (10%)

Query: 63  GKQLHCDILKRGA-PLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           G+Q+H   ++ G    +++    L+ FYV+      A  LF E+P  N +S+ TL  G  
Sbjct: 24  GQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYV 83

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
            + QF  AL +  +L +     + F  T+ +     + L  +  +IH+   K G   +  
Sbjct: 84  HAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTV 143

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           V   LID Y  CG+V+ A ++F  I  KD++SW  ++   A                   
Sbjct: 144 VANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACA------------------- 184

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
              NN  I    K                  L+   + D+     L+   A++G I DA 
Sbjct: 185 ---NNGNIGLGFK-----------------FLQLMPNPDVVSYNGLINGIAQAGKIEDAV 224

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
                MP  +   W+ +I  +    R  EALE+F  M   ++  + FTF+ +L   A+  
Sbjct: 225 RILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLS 284

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
            L  G  IH   +K GLDS++ V ++L+D+Y+KCG++ ++  +F     +N V+WN MI 
Sbjct: 285 ALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIY 344

Query: 422 GYVQLGDGEKAMNLFSSM-IGNDMQPTEVTFSSVLRACA 459
           GY + GD  +A++LF  + +  D +P  +TF +V+ AC+
Sbjct: 345 GYARNGDSAQAISLFELLKMERDTKPDGITFLNVISACS 383



 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 21/262 (8%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           D+ ++N L+N   Q   ++DA ++   MP  N+ S+ ++  G     +   AL +  ++ 
Sbjct: 203 DVVSYNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMH 262

Query: 138 KEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVD 197
            +  +++ F  + I+  + S+        IH C  K G  +   VG+SLID YS CG V+
Sbjct: 263 LKNLQIDEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVN 322

Query: 198 AARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV-MGYRPNNYTITAALKSC 256
            A  +F+ +  +++VSW  M+  YA N    +++ LF  +++    +P+  T    + +C
Sbjct: 323 DAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKMERDTKPDGITFLNVISAC 382

Query: 257 --------LGLEAFGVGKSVHGCA--LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEE 306
                   +G++ F    + +G A  +K C          ++ L  + G++  AQ    E
Sbjct: 383 SHSQIPFEMGIQYFDAMINEYGIAPSIKHC--------CSMIRLMGQKGELSRAQKMIHE 434

Query: 307 MPKKD--VIPWSLMIARYAQSD 326
           +  +   V+  SL+ A   Q D
Sbjct: 435 LGFESCGVVWRSLLAACGTQED 456


>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
           | chr2:34637734-34634734 | 20130731
          Length = 631

 Score =  280 bits (715), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 187/620 (30%), Positives = 298/620 (48%), Gaps = 74/620 (11%)

Query: 195 NVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALK 254
           N   ARQ+FD I   D  + + ++     +    E++ +   +R  G + +     A  K
Sbjct: 27  NFKRARQLFDNIPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLDIPVFMAVAK 86

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP 314
           +C         K +H  A +     +++VG  L+  Y K   +   +  F++M  +DV  
Sbjct: 87  ACAASRDALNVKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFDDMVVRDV-- 144

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
                          + L +FH M  + V  +  T +S+L ACA    L  GK IH   +
Sbjct: 145 ---------------KGLNVFHEMGWNGVKLDPVTVSSILPACADLKDLKSGKAIHGFAV 189

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
           + G+  NVFV NAL+++YAKC  +  +  +F   P ++ V+W+  ++ Y    + EK ++
Sbjct: 190 RNGMVENVFVCNALVNLYAKCLCVREAHAIFDLMPHRDVVSWSG-VLTYFTNKEYEKGLS 248

Query: 435 LFSSMIGNDMQPTEVTFSSV--LRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDM 492
           LFS M  + ++  EVT+ ++  LR          G + + +TI +     I  A  L + 
Sbjct: 249 LFSQMCRDGVETNEVTWKAMEMLRKMQNM-----GFKPNEITISS-----ILQACYLSES 298

Query: 493 YAKCGRIN-------DARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC 545
              C  I+            FD +  ++ V+W  MI   +MHG   EAL LF KM  +  
Sbjct: 299 LRMCKEIHYYVFRHWKVWNVFDMIAIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMV 358

Query: 546 KPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAV 605
           KP+ +TF+ VLS+CS++ L+++G  +F SMS+D+ +EP   HY+C+V +  R G+ +EA 
Sbjct: 359 KPDSVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEAY 418

Query: 606 KLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAK 665
           + I  +P  P+   W++LL  C V KN++L +  A+ + E++P     +V L N+   AK
Sbjct: 419 EFIQRMPMGPTAGAWKSLLAGCRVYKNVELAKISAKKLFEIEPSRSRDYVALCNILVTAK 478

Query: 666 RWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWLNKKTR 725
            W   + +R  MK  G+ K PG SW+     VH F  GD                     
Sbjct: 479 LWSEASKIRMFMKESGITKTPGCSWLHVGNRVHNFVAGDKK------------------- 519

Query: 726 DAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIRILKNLRICVDCHT 785
                             EK   L  HSE+LA+AFG+L +    +IR+ KNLRIC DCH 
Sbjct: 520 ------------------EKVESLCKHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHN 561

Query: 786 VIKLISEVVQREIVVRDINR 805
            IK +++VV   IVVRD  R
Sbjct: 562 AIKYMAKVVDVMIVVRDSFR 581



 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 63/404 (15%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKL 101
           LD   + A+ +    +R     K+LH D  + GA  ++F  N L++ Y +  C++   ++
Sbjct: 76  LDIPVFMAVAKACAASRDALNVKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRV 135

Query: 102 FDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLP 161
           FD+M + +                    L+V   +   G +++P   ++I+     +   
Sbjct: 136 FDDMVVRDV-----------------KGLNVFHEMGWNGVKLDPVTVSSILPACADLKDL 178

Query: 162 HVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCY 221
                IH    + G   + FV  +L++ Y+ C  V  A  +FD +  +D+VSW+G++  Y
Sbjct: 179 KSGKAIHGFAVRNGMVENVFVCNALVNLYAKCLCVREAHAIFDLMPHRDVVSWSGVL-TY 237

Query: 222 AENCFYEESLQLFCQ---------------------MRVMGYRPNNYTITAALKSCLGLE 260
             N  YE+ L LF Q                     M+ MG++PN  TI++ L++C   E
Sbjct: 238 FTNKEYEKGLSLFSQMCRDGVETNEVTWKAMEMLRKMQNMGFKPNEITISSILQACYLSE 297

Query: 261 AFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIA 320
           +  + K +H    +                + K  ++      F+ +  KDV+ W+ MI 
Sbjct: 298 SLRMCKEIHYYVFR----------------HWKVWNV------FDMIAIKDVVAWTTMIN 335

Query: 321 RYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL-D 379
             A     KEAL LF  M  S V P++ TF  VL +C+   L+  G QI +++ K  L +
Sbjct: 336 ANAMHGNGKEALFLFEKMLLSMVKPDSVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVE 395

Query: 380 SNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV-TWNTMIVG 422
            N    + ++D+Y++ G +  +       P       W +++ G
Sbjct: 396 PNAIHYSCVVDIYSRAGRLNEAYEFIQRMPMGPTAGAWKSLLAG 439


>Medtr3g088820.1 | PPR containing plant-like protein | HC |
           chr3:40646143-40648516 | 20130731
          Length = 698

 Score =  278 bits (712), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 175/615 (28%), Positives = 297/615 (48%), Gaps = 35/615 (5%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           + H     R  P+  F  N  L  Y +   L DA +LFDEMP  +  S+  L    SR  
Sbjct: 86  EFHLVATTRNPPI--FLRNRALEAYAKCSSLHDAQELFDEMPQRDGGSWNALITAYSRLR 143

Query: 125 QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
             D A+ + L + K+G   N     +++     +    +   +H  V K G  ++  +G+
Sbjct: 144 YPDEAISLFLWMNKDGVRANNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGS 203

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           +L+D Y+ CG +  AR++F  I   + V+W  +V  Y +    +E++ LF +M   G +P
Sbjct: 204 ALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKP 263

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK----------- 293
            N+T + AL +C  + A   G  +HG  +K    +D  V + L+ +Y K           
Sbjct: 264 LNFTFSNALVACSSMHALEEGMQIHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVF 323

Query: 294 --------------------SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
                               SG   DA+  F++MP ++VI W+ M+A Y +  +  EAL+
Sbjct: 324 HQLGSKDLVCWTCIVSGYAMSGKTWDARKLFDQMPVRNVISWNAMLAGYTRFFKWSEALD 383

Query: 334 LFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYA 393
               M  +    ++ T   ++   A  +   +GKQ+H  V + G  SN+ V NA++D+Y 
Sbjct: 384 FVCLMLDTVKDLDHVTLGLMINVSAGLLDHEMGKQLHGFVYRHGFHSNLMVGNAILDMYG 443

Query: 394 KCGEIENSMILF-MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
           KCG + ++ + F + S  ++ V+WN ++         E+ + +FS M   + +P++ TF 
Sbjct: 444 KCGNLNSARVWFNLMSNWRDRVSWNALLASCGLHHSSEQTLTMFSEMQW-EAKPSKYTFG 502

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
           ++L ACA   +L  G Q+H   I+  +  D  +  ALI MY KC  +  A         R
Sbjct: 503 TLLAACANTYSLHLGKQIHGFIIRHEFQIDSVIRTALIYMYCKCYCLEYAVEILKGAVSR 562

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
           + + WN +I G   +    +AL LF  M+    KP+++TF G+L AC   GL++ G   F
Sbjct: 563 DVIMWNTLILGCCHNHRGRDALELFGIMEAEGIKPDRVTFEGILLACVEEGLVEFGTQCF 622

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKN 632
           +SMS +Y + P +EHY CM+ L  R G  DE    +  +  +P++ +    L AC    +
Sbjct: 623 ESMSNEYGVLPWLEHYGCMIELYSRHGYMDELESFMKTMTIEPTLPMLERALDACQKNDS 682

Query: 633 IDLGRFCAQHVLEMK 647
             LG++ A+ + E +
Sbjct: 683 PILGKWIAKKIHEFE 697



 Score =  156 bits (394), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 209/456 (45%), Gaps = 33/456 (7%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           ++A++L         +  +Q+H  ++K G   ++   + L++ Y +   +  A ++F E+
Sbjct: 166 TFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEI 225

Query: 106 PLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCW 165
           P  N +++  + +          A+ +  R+F +G +   F  +  +    SM       
Sbjct: 226 PRPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVACSSMHALEEGM 285

Query: 166 TIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENC 225
            IH  V K G   D  V +SLI+ Y  CG ++   +VF  +  KD+V WT +V  YA + 
Sbjct: 286 QIHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSG 345

Query: 226 FYEESLQLFCQMRV----------MGYRP---------------------NNYTITAALK 254
              ++ +LF QM V           GY                       ++ T+   + 
Sbjct: 346 KTWDARKLFDQMPVRNVISWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDHVTLGLMIN 405

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK-KDVI 313
              GL    +GK +HG   +  +  +L VG  +L++Y K G++  A+++F  M   +D +
Sbjct: 406 VSAGLLDHEMGKQLHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRV 465

Query: 314 PWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
            W+ ++A       S++ L +F  M Q    P+ +TF ++L ACA    L LGKQIH  +
Sbjct: 466 SWNALLASCGLHHSSEQTLTMFSEM-QWEAKPSKYTFGTLLAACANTYSLHLGKQIHGFI 524

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           ++     +  +  AL+ +Y KC  +E ++ +   +  ++ + WNT+I+G      G  A+
Sbjct: 525 IRHEFQIDSVIRTALIYMYCKCYCLEYAVEILKGAVSRDVIMWNTLILGCCHNHRGRDAL 584

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
            LF  M    ++P  VTF  +L AC     ++ G Q
Sbjct: 585 ELFGIMEAEGIKPDRVTFEGILLACVEEGLVEFGTQ 620



 Score =  127 bits (319), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 150/307 (48%), Gaps = 31/307 (10%)

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
           +A   + C +   +    ++  +++    +  +F+ N  ++ YAKC  + ++  LF E P
Sbjct: 66  YAHFFRHCRSPKSIAAAHKVEFHLVATTRNPPIFLRNRALEAYAKCSSLHDAQELFDEMP 125

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
           +++  +WN +I  Y +L   ++A++LF  M  + ++   +TF+SVL +CA    L    Q
Sbjct: 126 QRDGGSWNALITAYSRLRYPDEAISLFLWMNKDGVRANNITFASVLGSCADVYELSLSQQ 185

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGL 529
           VH L +K  +++++ + +AL+D+YAKCG +  AR  F ++ +   V+WN ++  Y   G 
Sbjct: 186 VHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIVRRYLDVGD 245

Query: 530 STEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK-----SMSQDYNIEPC 584
           + EA+ LF +M     KP   TF   L ACS+   L++G  +        + +D  +   
Sbjct: 246 AKEAVLLFTRMFSDGVKPLNFTFSNALVACSSMHALEEGMQIHGGVVKWGLHEDTVVSSS 305

Query: 585 IEH-------------------------YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMV 619
           + +                         +TC+V      GK  +A KL  ++P + +V+ 
Sbjct: 306 LINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSGKTWDARKLFDQMPVR-NVIS 364

Query: 620 WRALLGA 626
           W A+L  
Sbjct: 365 WNAMLAG 371



 Score = 67.4 bits (163), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 13/259 (5%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMP-LTNTISFVTLAQGCS 121
           GKQLH  + + G   +L   N +L+ Y +   L+ A   F+ M    + +S+  L   C 
Sbjct: 416 GKQLHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRVSWNALLASCG 475

Query: 122 RSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAF 181
             H  +  L +   +  E  + + +   T++    +    H+   IH  + +   Q D+ 
Sbjct: 476 LHHSSEQTLTMFSEMQWEA-KPSKYTFGTLLAACANTYSLHLGKQIHGFIIRHEFQIDSV 534

Query: 182 VGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG 241
           + T+LI  Y  C  ++ A ++  G   +D++ W  ++     N    ++L+LF  M   G
Sbjct: 535 IRTALIYMYCKCYCLEYAVEILKGAVSRDVIMWNTLILGCCHNHRGRDALELFGIMEAEG 594

Query: 242 YRPNNYTITAALKSCL--GLEAFGVGKSVHGCALKACYDQDLYVGTE----LLELYAKSG 295
            +P+  T    L +C+  GL  FG       C      +  +    E    ++ELY++ G
Sbjct: 595 IKPDRVTFEGILLACVEEGLVEFGT-----QCFESMSNEYGVLPWLEHYGCMIELYSRHG 649

Query: 296 DIVDAQLFFEEMPKKDVIP 314
            + + + F + M  +  +P
Sbjct: 650 YMDELESFMKTMTIEPTLP 668


>Medtr5g091640.1 | PPR containing plant-like protein | HC |
           chr5:39962522-39960655 | 20130731
          Length = 542

 Score =  278 bits (711), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/462 (33%), Positives = 244/462 (52%), Gaps = 36/462 (7%)

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFA 351
           + SG+I  A   F  MP  ++  W+ +I  +++S   + A+ LF  M  S + P   T+ 
Sbjct: 72  SPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYP 131

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALM---------------------- 389
           SV +A A       G Q+H  V+K+GL ++ F+ N ++                      
Sbjct: 132 SVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLE 191

Query: 390 ----DV---------YAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLF 436
               DV         YAKCGEI+ S  LF +   +  V+WN+MI GYV+ G   +A+ LF
Sbjct: 192 LYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELF 251

Query: 437 SSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKC 496
           + M     + +E T  S+L ACA   AL  G  VH    +  +  ++ V  A+IDMY KC
Sbjct: 252 NKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKC 311

Query: 497 GRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNC-KPNKLTFVGV 555
           G + +A   F+   +R    WN++I G +M+G   EA   F+K++ +   KP+ ++F+GV
Sbjct: 312 GSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGV 371

Query: 556 LSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
           L+AC + G ++K +  F+ M   Y IEP I+HYTC+V +LG+ G  +EA +LI  +P +P
Sbjct: 372 LTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKP 431

Query: 616 SVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRK 675
             ++W +LL +C   +N+ + R  AQ V E+ P D   +VL+SN++A + +++     R 
Sbjct: 432 DAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRL 491

Query: 676 NMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAML 717
            MK    +KEPG S +E  G VH F  G   HP  + I  +L
Sbjct: 492 LMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLL 533



 Score =  127 bits (319), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 38/375 (10%)

Query: 191 SVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTIT 250
           S  GN++ A ++F  +   ++ SW  ++  ++ +   + ++ LF  M     +P   T  
Sbjct: 72  SPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYP 131

Query: 251 AALKSCLGLEAFGVGKSVHGCALK-----------------------------------A 275
           +  K+   L     G  +HG  +K                                    
Sbjct: 132 SVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLE 191

Query: 276 CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELF 335
            YD D+     ++  YAK G+I +++  F++M  +  + W+ MI+ Y ++ +  EALELF
Sbjct: 192 LYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELF 251

Query: 336 HCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
           + M+      + FT  S+L ACA    L  GK +H  + +   + NV V  A++D+Y KC
Sbjct: 252 NKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKC 311

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND-MQPTEVTFSSV 454
           G +EN++ +F   P +    WN++I+G    G   +A   FS +  +  ++P  V+F  V
Sbjct: 312 GSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGV 371

Query: 455 LRACAGFAALDPGLQVHSLTI-KTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KR 512
           L AC    A++       L + K      I     ++D+  + G + +A      M  K 
Sbjct: 372 LTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKP 431

Query: 513 EEVSWNAMICGYSMH 527
           + + W +++     H
Sbjct: 432 DAIIWGSLLSSCRKH 446



 Score =  123 bits (309), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 38/293 (12%)

Query: 368 QIHSNVLKVGLDSNVFVSN-ALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQL 426
           QI+ +++K GL  N   S  AL    +  G I  +  LF+  P  N  +WNT+I  + + 
Sbjct: 46  QIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRS 105

Query: 427 GDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK---------- 476
              + A++LF  M+ + +QP  +T+ SV +A A       G Q+H   +K          
Sbjct: 106 STPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFIC 165

Query: 477 -------------------------TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK 511
                                      Y++D+   N++I  YAKCG I+++R  FD M  
Sbjct: 166 NTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMIT 225

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           R  VSWN+MI GY  +G   EAL LFNKMQ    + ++ T V +L+AC++ G L  G+ +
Sbjct: 226 RTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWV 285

Query: 572 FKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALL 624
              + +++  E  +   T ++ +  + G  + AV++    P +  +  W +++
Sbjct: 286 HDYIKRNH-FELNVIVVTAIIDMYCKCGSVENAVEVFETCP-RRGLSCWNSII 336



 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 173/399 (43%), Gaps = 39/399 (9%)

Query: 61  NAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-LDDASKLFDEMPLTNTISFVTLAQG 119
           N   Q++  I+K G  L+  A    L F       ++ A KLF  MP  N  S+ T+ + 
Sbjct: 42  NHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRA 101

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
            SRS     A+ + + +     +       ++ K    +   H    +H  V K G Q D
Sbjct: 102 FSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQND 161

Query: 180 AFVGT-----------------------------------SLIDAYSVCGNVDAARQVFD 204
            F+                                     S+I  Y+ CG +D +R +FD
Sbjct: 162 QFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFD 221

Query: 205 GIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGV 264
            +  +  VSW  M+  Y  N    E+L+LF +M+V G+  + +T+ + L +C  L A   
Sbjct: 222 DMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQH 281

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           GK VH    +  ++ ++ V T ++++Y K G + +A   FE  P++ +  W+ +I   A 
Sbjct: 282 GKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAM 341

Query: 325 SDRSKEALELFHCMRQSSVV-PNNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNV 382
           +   +EA E F  +  S ++ P++ +F  VL AC     +   +     ++ K  ++ ++
Sbjct: 342 NGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSI 401

Query: 383 FVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMI 420
                ++DV  + G +E +  L    P + + + W +++
Sbjct: 402 KHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLL 440



 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 134/314 (42%), Gaps = 40/314 (12%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQ----------FDC- 94
           +Y ++ +   Q  H + G QLH  ++K G   D F  N ++  Y            FD  
Sbjct: 129 TYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGK 188

Query: 95  ------------------------LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHAL 130
                                   +D++  LFD+M    ++S+ ++  G  R+ +   AL
Sbjct: 189 KLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEAL 248

Query: 131 HVILRLFKEGHEVNPFVCTTIIKLLVSMD-LPHVCWTIHACVYKRGHQADAFVGTSLIDA 189
            +  ++  EG EV+ F   +++     +  L H  W +H  + +   + +  V T++ID 
Sbjct: 249 ELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKW-VHDYIKRNHFELNVIVVTAIIDM 307

Query: 190 YSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG-YRPNNYT 248
           Y  CG+V+ A +VF+    + +  W  ++   A N    E+ + F ++      +P++ +
Sbjct: 308 YCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVS 367

Query: 249 ITAALKSCLGLEAFGVGKSVHGCAL-KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
               L +C  L A    +      + K   +  +   T ++++  ++G + +A+   + M
Sbjct: 368 FIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGM 427

Query: 308 P-KKDVIPWSLMIA 320
           P K D I W  +++
Sbjct: 428 PLKPDAIIWGSLLS 441


>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:4610013-4612058 | 20130731
          Length = 520

 Score =  278 bits (710), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/465 (33%), Positives = 262/465 (56%), Gaps = 38/465 (8%)

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           G+ +H   LK  +  +  +  +LL LY KS  +  A+  F+++  + +  ++ MI  Y +
Sbjct: 56  GQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLK 115

Query: 325 SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV----LLILGKQIHSNVLKVGLDS 380
           + +  E+L+LFH +  S   P+ FTF+ +L+A   +V    +  LG+ +H+ +LK  ++ 
Sbjct: 116 NGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVEK 175

Query: 381 NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG---DGE------- 430
           +  +  AL+D Y K G +     +F    E+N ++  ++I GY+  G   D E       
Sbjct: 176 DDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTL 235

Query: 431 -KAMNLFSSMIGN----------------DMQ-----PTEVTFSSVLRACAGFAALDPGL 468
            K + +F++MI                  DMQ     P   TF+S++ AC+  AA + G 
Sbjct: 236 DKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGE 295

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           QV +  +KT +   I + +ALIDMY+KCGR+ DA+  FD M ++   SW +MI GY  +G
Sbjct: 296 QVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNG 355

Query: 529 LSTEALNLFNKMQ-QTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
              EAL LF KMQ + +  PN +TF+  L+AC++AGL+++G  +F+SM  +Y ++P +EH
Sbjct: 356 FPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEH 415

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMK 647
           Y CMV LLGR G  ++A + +  +P +P+  VW ALL +C +  NI++ +  A  + ++ 
Sbjct: 416 YACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFKLN 475

Query: 648 PHD-DGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
            +   G +V LSN  A A +WDNV+ +R+ MK KG+ K+   SWV
Sbjct: 476 AYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520



 Score =  155 bits (393), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 231/483 (47%), Gaps = 43/483 (8%)

Query: 137 FKEGHEVNP---FVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVC 193
           F + H+  P   F   T+ +  ++   P     IH+ + K G   +  +   L+  Y   
Sbjct: 27  FSQNHDFIPPSTFFSNTL-QHYINSQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKS 85

Query: 194 GNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAAL 253
            ++  ARQVFD +  + + ++  M+G Y +N   +ESL LF Q+ V G +P+ +T +  L
Sbjct: 86  HSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMIL 145

Query: 254 KSCLGLEAFG----VGKSVHGCALKACYDQDLYVGTELLELYAKSG---------DIV-- 298
           K+     + G    +G+ VH   LK   ++D  + T L++ Y K+G         D++  
Sbjct: 146 KASTNRVSNGMVGDLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSE 205

Query: 299 --------------------DAQLFFEEMPKKDVIPWSLMIARYAQ-SDRSKEALELFHC 337
                               DA+  F +   KDV+ ++ MI  Y++ S+ +  +LE++  
Sbjct: 206 KNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYID 265

Query: 338 MRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGE 397
           M++ +  PN  TFAS++ AC+      +G+Q+ + ++K    + + + +AL+D+Y+KCG 
Sbjct: 266 MQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGR 325

Query: 398 IENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM-IGNDMQPTEVTFSSVLR 456
           + ++  +F    E+N  +W +MI GY + G  ++A+ LF  M I   + P  VTF S L 
Sbjct: 326 VIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALT 385

Query: 457 ACAGFAALDPGLQV-HSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEV 515
           ACA    ++ G ++  S+  + +    +     ++D+  + G +N A     +M +R   
Sbjct: 386 ACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPERPNS 445

Query: 516 S-WNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKS 574
             W A++    +HG    A    N++ + N       +V + +  ++AG  D    L + 
Sbjct: 446 DVWLALLSSCRIHGNIEMAKLAANELFKLNAYGRPGAYVALSNTLADAGKWDNVSELREV 505

Query: 575 MSQ 577
           M +
Sbjct: 506 MKE 508



 Score =  140 bits (352), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 178/370 (48%), Gaps = 45/370 (12%)

Query: 40  PPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDAS 99
           PP  S  ++  LQ  I ++ P+ G+++H  ILK G   +      LL  Y++   L  A 
Sbjct: 35  PP--STFFSNTLQHYINSQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYAR 92

Query: 100 KLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSM- 158
           ++FD++      ++  +  G  ++ Q D +L +  +L   G + + F  + I+K   +  
Sbjct: 93  QVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRV 152

Query: 159 ------DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMV 212
                 DL  +   +HA + K   + D  + T+LID+Y   G V   R VFD +  K+++
Sbjct: 153 SNGMVGDLGRM---VHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVI 209

Query: 213 SWTGMVGCYAENCFYEE--------------------------------SLQLFCQMRVM 240
           S T ++  Y    F+++                                SL+++  M+ +
Sbjct: 210 SSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRL 269

Query: 241 GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDA 300
            +RPN  T  + + +C  L AF +G+ V    +K  +   + +G+ L+++Y+K G ++DA
Sbjct: 270 NFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDA 329

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR-QSSVVPNNFTFASVLQACAA 359
           Q  F+ M +K+V  W+ MI  Y ++    EALELF  M+ + S+ PN  TF S L ACA 
Sbjct: 330 QRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTACAH 389

Query: 360 QVLLILGKQI 369
             L+  G +I
Sbjct: 390 AGLVERGWEI 399


>Medtr1g114220.1 | PPR containing plant-like protein | HC |
           chr1:51543346-51541694 | 20130731
          Length = 550

 Score =  277 bits (709), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 148/462 (32%), Positives = 246/462 (53%), Gaps = 34/462 (7%)

Query: 292 AKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFA 351
           + SGDI  +   F ++    +  W+++I  Y+ S     +L +F  M +  V P+  T+ 
Sbjct: 59  SNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYP 118

Query: 352 SVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNAL----------------------- 388
            +++A A       G  +H+ ++K G +S+ F+ N+L                       
Sbjct: 119 FLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGK 178

Query: 389 --------MDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI 440
                   +D YAKCGE+  +  +F    E++  +W++ I GYV+ G+  +AM +F  M 
Sbjct: 179 NLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMR 238

Query: 441 GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRIN 500
               +  EVT  SVL ACA   AL  G  +H   I       + +  +L+DMYAKCG I 
Sbjct: 239 AVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIE 298

Query: 501 DARLTFDKMDKREE--VSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSA 558
           +A   F  + K +     WNAMI G + HGL  E+L LF +MQ    + +++T++ +L+A
Sbjct: 299 EALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAA 358

Query: 559 CSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVM 618
           C++ GL+ +  + F+S+ +   + P  EHY CMV +L R G+   A + I +IP +P+  
Sbjct: 359 CAHGGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTAS 417

Query: 619 VWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMK 678
           +  A+   C+  +N DL     + ++E+ P++DG ++ LSN+YAV KRWD+  S+R+ M+
Sbjct: 418 MLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAME 477

Query: 679 RKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWL 720
           R+GVKK PG S+VE   + H F   D +HPD+    +ML ++
Sbjct: 478 RRGVKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFV 519



 Score =  124 bits (310), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 154/364 (42%), Gaps = 33/364 (9%)

Query: 172 YKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESL 231
           Y   H+           A S  G++D + +VF  I    + SW  ++  Y+ +     SL
Sbjct: 40  YGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSL 99

Query: 232 QLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELY 291
            +F +M   G  P+  T    +K+   L     G SVH   +K  ++ D ++   L+ +Y
Sbjct: 100 SIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMY 159

Query: 292 A-------------------------------KSGDIVDAQLFFEEMPKKDVIPWSLMIA 320
           A                               K G++  AQ  FE M ++DV  WS  I 
Sbjct: 160 ASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFID 219

Query: 321 RYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDS 380
            Y ++   +EA+ +F  MR      N  T  SVL ACA    L  G+ +H  ++   L  
Sbjct: 220 GYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPM 279

Query: 381 NVFVSNALMDVYAKCGEIENSMILFME-SPEQNEV-TWNTMIVGYVQLGDGEKAMNLFSS 438
            + +  +L+D+YAKCG IE ++ +F   S  Q +V  WN MI G    G  E+++ LF  
Sbjct: 280 TMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKE 339

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGR 498
           M    ++  E+T+  +L ACA    +          +K            ++D+ A+ G+
Sbjct: 340 MQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQ 399

Query: 499 INDA 502
           +  A
Sbjct: 400 LTTA 403



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/451 (21%), Positives = 185/451 (41%), Gaps = 68/451 (15%)

Query: 95  LDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL 154
           +D + ++F ++      S+  + +G S S    H+L + L++ + G   +      ++K 
Sbjct: 64  IDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKA 123

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAFVGTSLI--------------------------- 187
              +       ++HA + K GH++D F+  SLI                           
Sbjct: 124 SARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSW 183

Query: 188 ----DAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYR 243
               D Y+ CG +  A++VF+ +  +D+ SW+  +  Y +   Y E++ +F +MR +G +
Sbjct: 184 NSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPK 243

Query: 244 PNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLF 303
            N  T+ + L +C  L A   G+ +H   +       + + T L+++YAK G I +A   
Sbjct: 244 ANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFV 303

Query: 304 FEEMPKK--DVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
           F  + K   DV  W+ MI   A     +E+L+LF  M+ + +  +  T+  +L ACA   
Sbjct: 304 FRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGG 363

Query: 362 LLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIV 421
           L+        +++K G+         ++DV A+ G++  +     + P            
Sbjct: 364 LVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQFICQIP------------ 411

Query: 422 GYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNN 481
                                 ++PT     ++   C      D    V    I+   NN
Sbjct: 412 ----------------------IEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNN 449

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMDKR 512
           D      L ++YA   R +D++   + M++R
Sbjct: 450 D-GRYIGLSNVYAVVKRWDDSKSMREAMERR 479



 Score =  112 bits (281), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 40/315 (12%)

Query: 347 NFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNV-FVSNAL-MDVYAKCGEIENSMIL 404
           N T  S+L  C + + L   K++H+  +  GL     F+   L     +  G+I+ S  +
Sbjct: 14  NGTLLSLLDKCKSMLEL---KKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRV 70

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAAL 464
           F +       +WN +I GY    +   ++++F  M+ + + P  +T+  +++A A  +  
Sbjct: 71  FSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQ 130

Query: 465 DPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGY 524
             G+ VH+  IKT + +D  + N+LI MYA CG I  A   F+ M  +  VSWN+M+ GY
Sbjct: 131 KSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGY 190

Query: 525 --------------SMH-----------------GLSTEALNLFNKMQQTNCKPNKLTFV 553
                         SM                  G   EA+ +F KM+    K N++T V
Sbjct: 191 AKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250

Query: 554 GVLSACSNAGLLDKGQSLFKSMSQDYNIEP-CIEHYTCMVGLLGRLGKFDEAVKLI-GEI 611
            VLSAC++ G L KG+ + + +    N+ P  +   T +V +  + G  +EA+ +  G  
Sbjct: 251 SVLSACAHLGALQKGRMMHQYIID--NLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGIS 308

Query: 612 PFQPSVMVWRALLGA 626
             Q  V +W A++G 
Sbjct: 309 KSQTDVFIWNAMIGG 323


>Medtr5g043920.1 | PPR containing plant-like protein | HC |
           chr5:19295539-19293687 | 20130731
          Length = 498

 Score =  275 bits (704), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/430 (36%), Positives = 240/430 (55%), Gaps = 12/430 (2%)

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           +L F        I W+++I  YA SD   E++ +F  MR++ V PN  T+  + ++CA  
Sbjct: 65  KLVFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMA 124

Query: 361 VLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMI 420
           ++L  GKQ+H++++K GLDS+V+V N +++ Y  C +I  +  +F E   +  V+WN+++
Sbjct: 125 LVLCEGKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVM 184

Query: 421 VGYVQ---LGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKT 477
              V+   L DG   +  F  M     +P E +   +L  CA    L  G  VHS  I  
Sbjct: 185 TACVENVWLSDG---IGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILK 241

Query: 478 RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLF 537
                + +  AL+DMY K G +  AR+ F++M+KR   +W+AMI G + HG + EAL LF
Sbjct: 242 GMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLF 301

Query: 538 NKM---QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGL 594
           + M   +  N  PN +T++GVL ACS+AG++D+G   F+ M   + I+P + HY  MV +
Sbjct: 302 DMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDV 361

Query: 595 LGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNID---LGRFCAQHVLEMKPHDD 651
           LGR G   EA + I  +PF P  +VWR LL AC V    D   +G    + +LEM+P   
Sbjct: 362 LGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRG 421

Query: 652 GTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNK 711
           G  V+++NMYA    W+  A+VR+ M+  G+KK  G S V+  G ++ F  G  S PD  
Sbjct: 422 GNLVIVANMYAEVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLM 481

Query: 712 LICAMLEWLN 721
            +  +L+ LN
Sbjct: 482 PVYDLLDALN 491



 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 23/330 (6%)

Query: 212 VSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGC 271
           +SW  ++  YA +    ES+ +F +MR  G +PN  T     KSC        GK VH  
Sbjct: 77  ISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHAD 136

Query: 272 ALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEA 331
            +K   D D+YV   ++  Y     IV A+  F+EM  + ++ W+ ++    ++    + 
Sbjct: 137 LVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDG 196

Query: 332 LELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDV 391
           +  F  MR  +  P+  +   +L  CA    L LG+ +HS ++  G+  +V +  AL+D+
Sbjct: 197 IGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDM 256

Query: 392 YAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSM---IGNDMQPTE 448
           Y K G +  + ++F    ++N  TW+ MI+G  Q G  E+A+ LF  M     N++ P  
Sbjct: 257 YGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNY 316

Query: 449 VTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN----------ALIDMYAKCGR 498
           VT+  VL AC+    +D G          RY  D+   +          A++D+  + G 
Sbjct: 317 VTYLGVLCACSHAGMVDEGF---------RYFRDMEFVHGIKPMMVHYGAMVDVLGRAGH 367

Query: 499 INDARLTFDKMD-KREEVSWNAMICGYSMH 527
           + +A      M    + + W  ++   ++H
Sbjct: 368 LGEAYRFIQSMPFAPDPIVWRTLLSACTVH 397



 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 23/272 (8%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GKQ+H D++K G   D++  N ++NFY     +  A K+FDEM +   +S+ ++   C  
Sbjct: 130 GKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVE 189

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVC---WTIHACVYKRGHQAD 179
           +      +    ++     E  P   + ++ L V  +L ++    W +H+ +  +G    
Sbjct: 190 NVWLSDGIGYFFKMRDCAFE--PDETSMVLLLSVCAELGYLSLGRW-VHSQLILKGMVLS 246

Query: 180 AFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM-- 237
             +GT+L+D Y   G +  AR VF+ +  +++ +W+ M+   A++ F EE+L LF  M  
Sbjct: 247 VHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMND 306

Query: 238 -RVMGYRPNNYTITAALKSCL-------GLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
            +     PN  T    L +C        G   F   + VHG          ++ G  +++
Sbjct: 307 KKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIK-----PMMVHYGA-MVD 360

Query: 290 LYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
           +  ++G + +A  F + MP   D I W  +++
Sbjct: 361 VLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLS 392


>Medtr8g102760.1 | PPR containing plant-like protein | HC |
           chr8:43261430-43259561 | 20130731
          Length = 447

 Score =  275 bits (703), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 226/393 (57%), Gaps = 4/393 (1%)

Query: 303 FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVL 362
           F E  P      W+ +I  Y + +  + AL ++  M ++ V+P+ +T   VL+A +    
Sbjct: 55  FLESNPAS--FNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFA 112

Query: 363 LILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVG 422
           + LG+Q+HS  +K+GL SN +  +  +++Y K G+ +++  +F E+ E    +WN +I G
Sbjct: 113 IQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISG 172

Query: 423 YVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN-- 480
             Q G    A+ +F  M  +  +P  +T  SV+ AC     L   LQ+H    + + N  
Sbjct: 173 LSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEW 232

Query: 481 NDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
             I ++N+LIDMY KCGR++ A   F  M+ R   SW +MI GY+MHG + EAL  F+ M
Sbjct: 233 TVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCM 292

Query: 541 QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGK 600
           +++  KPN +TF+GVLSAC + G + +G+  F  M   Y I P ++HY CMV LLGR G 
Sbjct: 293 RESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGL 352

Query: 601 FDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNM 660
           FD+A +++ E+P +P+ +VW  L+GAC    N+D+  + A+++  ++P ++G +V+LSN+
Sbjct: 353 FDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNI 412

Query: 661 YAVAKRWDNVASVRKNMKRKGVKKEPGLSWVEN 693
           YA    W  V  +R  MK   + K P  S   N
Sbjct: 413 YANKGLWKEVERIRSFMKEGRLAKIPAYSITTN 445



 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 6/321 (1%)

Query: 213 SWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCA 272
           +W  ++  Y      + +L+++  M   G  P+ YT+   LK+     A  +G+ VH   
Sbjct: 64  NWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYG 123

Query: 273 LKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
           +K     + Y  +  + LY K+GD   A   F+E  +  +  W+ +I+  +Q   + +A+
Sbjct: 124 IKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAI 183

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLD--SNVFVSNALMD 390
            +F  M++    P+  T  SV+ AC +   L L  Q+H  V +   +  + + +SN+L+D
Sbjct: 184 VVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLID 243

Query: 391 VYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVT 450
           +Y KCG ++ +  +F    ++N  +W +MIVGY   G  ++A+  F  M  + ++P  VT
Sbjct: 244 MYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVT 303

Query: 451 FSSVLRACAGFAALDPGLQVHSLTIKTRY--NNDIAVANALIDMYAKCGRINDARLTFDK 508
           F  VL AC     +  G + +   +K  Y     +     ++D+  + G  +DAR   ++
Sbjct: 304 FIGVLSACVHGGTVQEG-RFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEE 362

Query: 509 MD-KREEVSWNAMICGYSMHG 528
           M  K   V W  ++     HG
Sbjct: 363 MPMKPNSVVWGCLMGACEKHG 383



 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 16/288 (5%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D ++   +L+   Q+     G+Q+H   +K G   + +  +  +N Y +    D A K+F
Sbjct: 96  DRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVF 155

Query: 103 DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           DE       S+  L  G S+      A+ V + + + G E +     +++    S+   +
Sbjct: 156 DENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLY 215

Query: 163 VCWTIHACVY--KRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGC 220
           +   +H  V+  K        +  SLID Y  CG +D A +VF  +  +++ SWT M+  
Sbjct: 216 LALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVG 275

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCL-------GLEAFGVGKSVHGCAL 273
           YA +   +E+L  F  MR  G +PN  T    L +C+       G   F + K+++G   
Sbjct: 276 YAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGIT- 334

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMP-KKDVIPWSLMIA 320
                Q  + G  +++L  ++G   DA+   EEMP K + + W  ++ 
Sbjct: 335 ----PQLQHYGC-MVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMG 377


>Medtr4g133610.1 | PPR containing plant-like protein | HC |
           chr4:55889196-55891282 | 20130731
          Length = 573

 Score =  275 bits (703), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/517 (32%), Positives = 275/517 (53%), Gaps = 29/517 (5%)

Query: 195 NVDAARQVFDGI-FCKDMVSWTGMVGCY-AENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
           N+  A ++FD +  C +   WT ++  + + +  +   +  F  M   G  P+ +T ++ 
Sbjct: 62  NLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSV 121

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           L +C  + A   GK VH   +++ +  +  V T LL++YAK G + DA+  F+ M  +DV
Sbjct: 122 LNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDV 181

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
           + W+ MI  YA++ R  +A  LF  M +     N+FT+ +++   A    +    +++ +
Sbjct: 182 VAWTAMICGYAKAGRMVDARLLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELY-D 236

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP-EQNEVTWNTMIVGYVQLGDGEK 431
           V+  G +   +V  A++  Y K G +  +  +F E P   N  T   ++  Y Q G   +
Sbjct: 237 VMN-GKEEVTWV--AMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHARE 293

Query: 432 AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIA------- 484
           A+ ++  M    ++ T+V     + ACA         Q+  + +      DI        
Sbjct: 294 AIEMYEKMRRAKIKVTDVAMVGAISACA---------QLRDIRMSNLLTYDIEEGFCEKT 344

Query: 485 --VANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ 542
             V+NALI M +KCG I+ A   F+ M  R+  +++AMI  ++ HG S +A++LF KMQQ
Sbjct: 345 HIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQ 404

Query: 543 TNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFD 602
               PN++TFVGVL+ACS +GL+++G   F+ M+  Y IEP  EHYTCMV LLGR G+ +
Sbjct: 405 EGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLE 464

Query: 603 EAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYA 662
           +A  LI E         W +LL AC V  N++LG   A+H+ E+ P D G +VLL+N YA
Sbjct: 465 KAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYA 524

Query: 663 VAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHY 699
              +W+    V+K M +KG+KK  G SW++ +    Y
Sbjct: 525 SNDKWERAEEVKKLMSKKGMKKPSGYSWIQRETKGQY 561



 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 223/485 (45%), Gaps = 38/485 (7%)

Query: 64  KQLHCDILK---RGAPLDLFAHNI--LLNFYVQFDCLDDASKLFDEMP-LTNTISFVTLA 117
           KQ+H   LK   + AP   F   +  +L+F  +   L  A KLFD MP  +N   + +L 
Sbjct: 27  KQIHALFLKHLPQNAPHHFFDRLLFRVLHFSAEKSNLYYAHKLFDTMPNCSNCFIWTSLI 86

Query: 118 QGCSRSH-QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGH 176
           +     H  F H +     + ++G   + F  ++++     +        +HA + + G 
Sbjct: 87  RAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGF 146

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
             +  V T+L+D Y+ CG V  AR VFDG+  +D+V+WT M+  YA+     ++  LF  
Sbjct: 147 LGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDN 206

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTE------LLEL 290
              MG R N++T T  +           G + +G    A    D+  G E      ++  
Sbjct: 207 ---MGER-NSFTWTTMV----------AGYANYGDMKAAMELYDVMNGKEEVTWVAMIAG 252

Query: 291 YAKSGDIVDAQLFFEEMPKKDVIPW-----SLMIARYAQSDRSKEALELFHCMRQSSVVP 345
           Y K G++ +A+  F+E+P    +P      + ++A YAQ+  ++EA+E++  MR++ +  
Sbjct: 253 YGKLGNVSEARRIFDEIP----VPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKV 308

Query: 346 NNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF 405
            +      + ACA    + +   +  ++ +   +    VSNAL+ + +KCG I+ +   F
Sbjct: 309 TDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREF 368

Query: 406 MESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALD 465
                ++  T++ MI  + + G  + A++LF  M    + P +VTF  VL AC+    ++
Sbjct: 369 NIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIE 428

Query: 466 PGLQVHSLTIKTRYNNDIAV-ANALIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICG 523
            G +   +         +      ++D+  + G++  A  L  +     +  +W +++  
Sbjct: 429 EGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAA 488

Query: 524 YSMHG 528
             ++G
Sbjct: 489 CRVYG 493



 Score =  106 bits (265), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 174/381 (45%), Gaps = 30/381 (7%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GKQ+H  +++ G   +      LL+ Y +   + DA  +FD M   + +++  +  G ++
Sbjct: 134 GKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAK 193

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIK-------LLVSMDLPHVCWTIHACVYKRG 175
           + +   A      LF    E N F  TT++        +  +M+L           Y   
Sbjct: 194 AGRMVDA----RLLFDNMGERNSFTWTTMVAGYANYGDMKAAMEL-----------YDVM 238

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCK-DMVSWTGMVGCYAENCFYEESLQLF 234
           +  +     ++I  Y   GNV  AR++FD I    +  +   ++ CYA+N    E+++++
Sbjct: 239 NGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMY 298

Query: 235 CQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKS 294
            +MR    +  +  +  A+ +C  L    +   +     +   ++   V   L+ + +K 
Sbjct: 299 EKMRRAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKC 358

Query: 295 GDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVL 354
           G+I  A   F  M  +D+  +S MIA +A+  +S++A++LF  M+Q  + PN  TF  VL
Sbjct: 359 GNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVL 418

Query: 355 QACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQN 412
            AC+   L+  G +    +  V G++        ++D+  + G++E +  L  E S   +
Sbjct: 419 NACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSAD 478

Query: 413 EVTWNTM-----IVGYVQLGD 428
             TW ++     + G V+LG+
Sbjct: 479 ATTWGSLLAACRVYGNVELGE 499


>Medtr1g040705.3 | PPR containing plant-like protein | HC |
           chr1:15076249-15080305 | 20130731
          Length = 713

 Score =  275 bits (702), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 260/468 (55%), Gaps = 10/468 (2%)

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN 412
           ++Q C     L   K +H  VL+      V     ++++Y +CG +++++ +F  +    
Sbjct: 256 LMQLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVF-RNMNMT 314

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
           E      +      G+ ++A+++   +    +         +++ C    +L+    VH 
Sbjct: 315 ERKLIEELDSSCMEGEVKEAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAKVVHR 374

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
             ++      ++  N +++MY +CG ++DA   F  M++R+  +   MI   + +G + +
Sbjct: 375 YVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAED 434

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           +++LF + +++  KP+   F+GV  ACS  G + +G   F+SMS+DY I P +EHY  +V
Sbjct: 435 SIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEHYVSIV 494

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            ++G +G  DEA++ I ++P +PSV VW  L+ +C V  N +LG  CA+ V ++ P    
Sbjct: 495 DMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDP---- 550

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
               L+    V+      + + KN K+    K P  + V N   +H +  GDTS P+N +
Sbjct: 551 --SRLNEKSKVSLLLIETSDITKNKKQN---KPPDNNPVGNMNRIHEYRAGDTSLPENNM 605

Query: 713 ICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIR 772
           I A+L  L  + ++AGY+ +    L DV+ ++KE  L  HSERLA+A GLL  P+  +IR
Sbjct: 606 IYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIR 665

Query: 773 ILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           ++KNLR+C DCHT +K+IS++V RE ++RD  RFHHF++G+CSC DYW
Sbjct: 666 VIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 713



 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 9/262 (3%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
            K +H  +L+  +PL +     +L  Y Q   +DDA  +F  M +T       L   C  
Sbjct: 269 AKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKLIEELDSSCME 328

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
             +   A+ V+  L K    V+   C  +++             +H  V +         
Sbjct: 329 G-EVKEAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVST 387

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
              +++ Y  CG+VD A  VF  +  +D+ +   M+   A+N F E+S+ LF Q +  G 
Sbjct: 388 CNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGL 447

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYAKSGDIV 298
           +P+         +C  L     G  +H  ++   Y+     + YV   ++++    G++ 
Sbjct: 448 KPDGQMFIGVFGACSMLGDIVEG-MLHFESMSRDYEIVPTMEHYVS--IVDMIGSIGNLD 504

Query: 299 DAQLFFEEMP-KKDVIPWSLMI 319
           +A  F E+MP +  V  W  ++
Sbjct: 505 EALEFIEKMPMEPSVEVWETLM 526



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/316 (19%), Positives = 134/316 (42%), Gaps = 26/316 (8%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLID 188
           A+ V+  L K    V+ ++C  +++L    +       +H  V +            +++
Sbjct: 234 AIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILE 293

Query: 189 AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYT 248
            Y  CG+VD A  VF  +     ++   ++     +C   E  +    ++V+      + 
Sbjct: 294 MYFQCGSVDDAVNVFRNM----NMTERKLIEELDSSCMEGEVKEAIDVLQVL----EKFH 345

Query: 249 ITAALKSCLGL-------EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
           I   L  CL L       ++    K VH   L+      +     +LE+Y + G + DA 
Sbjct: 346 IHVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAV 405

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F+ M ++D+    +MI + A++  ++++++LF   ++S + P+   F  V  AC+   
Sbjct: 406 NVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLG 465

Query: 362 LLILGK---QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV-TWN 417
            ++ G    +  S   ++      +VS  ++D+    G ++ ++    + P +  V  W 
Sbjct: 466 DIVEGMLHFESMSRDYEIVPTMEHYVS--IVDMIGSIGNLDEALEFIEKMPMEPSVEVWE 523

Query: 418 TM-----IVGYVQLGD 428
           T+     + G  +LGD
Sbjct: 524 TLMNSCRVHGNTELGD 539


>Medtr1g040705.1 | PPR containing plant-like protein | HC |
           chr1:15076249-15083015 | 20130731
          Length = 702

 Score =  275 bits (702), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 260/468 (55%), Gaps = 10/468 (2%)

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN 412
           ++Q C     L   K +H  VL+      V     ++++Y +CG +++++ +F  +    
Sbjct: 245 LMQLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVF-RNMNMT 303

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHS 472
           E      +      G+ ++A+++   +    +         +++ C    +L+    VH 
Sbjct: 304 ERKLIEELDSSCMEGEVKEAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAKVVHR 363

Query: 473 LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTE 532
             ++      ++  N +++MY +CG ++DA   F  M++R+  +   MI   + +G + +
Sbjct: 364 YVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAED 423

Query: 533 ALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMV 592
           +++LF + +++  KP+   F+GV  ACS  G + +G   F+SMS+DY I P +EHY  +V
Sbjct: 424 SIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEHYVSIV 483

Query: 593 GLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDG 652
            ++G +G  DEA++ I ++P +PSV VW  L+ +C V  N +LG  CA+ V ++ P    
Sbjct: 484 DMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDP---- 539

Query: 653 THVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKL 712
               L+    V+      + + KN K+    K P  + V N   +H +  GDTS P+N +
Sbjct: 540 --SRLNEKSKVSLLLIETSDITKNKKQN---KPPDNNPVGNMNRIHEYRAGDTSLPENNM 594

Query: 713 ICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPSTCSIR 772
           I A+L  L  + ++AGY+ +    L DV+ ++KE  L  HSERLA+A GLL  P+  +IR
Sbjct: 595 IYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIR 654

Query: 773 ILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
           ++KNLR+C DCHT +K+IS++V RE ++RD  RFHHF++G+CSC DYW
Sbjct: 655 VIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702



 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 9/262 (3%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
            K +H  +L+  +PL +     +L  Y Q   +DDA  +F  M +T       L   C  
Sbjct: 258 AKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKLIEELDSSCME 317

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
             +   A+ V+  L K    V+   C  +++             +H  V +         
Sbjct: 318 G-EVKEAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVST 376

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
              +++ Y  CG+VD A  VF  +  +D+ +   M+   A+N F E+S+ LF Q +  G 
Sbjct: 377 CNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGL 436

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYAKSGDIV 298
           +P+         +C  L     G  +H  ++   Y+     + YV   ++++    G++ 
Sbjct: 437 KPDGQMFIGVFGACSMLGDIVEG-MLHFESMSRDYEIVPTMEHYVS--IVDMIGSIGNLD 493

Query: 299 DAQLFFEEMP-KKDVIPWSLMI 319
           +A  F E+MP +  V  W  ++
Sbjct: 494 EALEFIEKMPMEPSVEVWETLM 515



 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/316 (19%), Positives = 134/316 (42%), Gaps = 26/316 (8%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLID 188
           A+ V+  L K    V+ ++C  +++L    +       +H  V +            +++
Sbjct: 223 AIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILE 282

Query: 189 AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYT 248
            Y  CG+VD A  VF  +     ++   ++     +C   E  +    ++V+      + 
Sbjct: 283 MYFQCGSVDDAVNVFRNM----NMTERKLIEELDSSCMEGEVKEAIDVLQVL----EKFH 334

Query: 249 ITAALKSCLGL-------EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
           I   L  CL L       ++    K VH   L+      +     +LE+Y + G + DA 
Sbjct: 335 IHVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAV 394

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F+ M ++D+    +MI + A++  ++++++LF   ++S + P+   F  V  AC+   
Sbjct: 395 NVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLG 454

Query: 362 LLILGK---QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEV-TWN 417
            ++ G    +  S   ++      +VS  ++D+    G ++ ++    + P +  V  W 
Sbjct: 455 DIVEGMLHFESMSRDYEIVPTMEHYVS--IVDMIGSIGNLDEALEFIEKMPMEPSVEVWE 512

Query: 418 TM-----IVGYVQLGD 428
           T+     + G  +LGD
Sbjct: 513 TLMNSCRVHGNTELGD 528


>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:874317-871628 | 20130731
          Length = 505

 Score =  274 bits (700), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 238/435 (54%), Gaps = 5/435 (1%)

Query: 285 TELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
           T+LL  Y K G I  A+  F++MP++++  W++MIA Y  +    +AL +F   ++  V+
Sbjct: 39  TDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVL 98

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           P+ +T   + +         LG   H  V+K+G +  V V+N++++ Y KCG +  ++ +
Sbjct: 99  PDCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSV 158

Query: 405 FM-ESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIG--NDMQPTEVTFSSVLRACAGF 461
           F   +  ++  TWN MI G+ + G   +A++ F  M+   N ++   +T  S+L AC   
Sbjct: 159 FSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKE 218

Query: 462 AALDPGLQVHSLTIKT-RYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
             L    +VH   ++   ++ D  + NALID Y KCG + D+   F  +     V+W  M
Sbjct: 219 GDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTM 278

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
           I  Y MHG   E++ LF KM     +PN +T   +L++CS+ GLLD+G+ +F SM  DY 
Sbjct: 279 ISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYG 338

Query: 581 IEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP-SVMVWRALLGACVVQKNIDLGRFC 639
           +EP  EHY CMV L  R G+ +EA++L+  +     +  +W ALL  CV+ +N+ +G   
Sbjct: 339 LEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAGCVMHQNVKIGEVA 398

Query: 640 AQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHY 699
           A H+ +++P++   +V L  +Y        V+++R  M+  G+ K PG SW+   G  H 
Sbjct: 399 AHHLFQLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDLGLVKTPGCSWINIAGRAHK 458

Query: 700 FSVGDTSHPDNKLIC 714
           F  GD SHP + +IC
Sbjct: 459 FYQGDLSHPLSHIIC 473



 Score =  166 bits (421), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 185/360 (51%), Gaps = 15/360 (4%)

Query: 179 DAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMR 238
           +  + T L+ AY+  G +  AR++FD +  ++M SW  M+  Y  N  Y ++L +F   +
Sbjct: 34  NVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSMYFDALTVFEAFK 93

Query: 239 VMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIV 298
             G  P+ YT+    K  + ++   +G   HG  +K  Y++ + V   +LE Y K G + 
Sbjct: 94  RCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNNSVLEFYVKCGTMS 153

Query: 299 DA-QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ-----SSVVPNNFTFAS 352
            A  +F      +D   W+LMI+ + ++    EA+   HC R+     + +  ++ T  S
Sbjct: 154 QALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAV---HCFREMLKYRNGIELDHMTLPS 210

Query: 353 VLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQ 411
           +L AC  +  L+  K++H  +++  G D++  + NAL+D Y KCG +++S  +F      
Sbjct: 211 ILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCYV 270

Query: 412 NEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVH 471
           N VTW TMI  Y   G G++++ LF  M+    +P  VT +++L +C+    LD G ++ 
Sbjct: 271 NLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKKIF 330

Query: 472 SLTIKTRYNNDIAVANA-LIDMYAKCGRINDARLTFDKMDKREEVS---WNAMICGYSMH 527
              I        A   A ++D++++CGR+ +A    ++M K   V+   W A++ G  MH
Sbjct: 331 GSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERM-KSSSVTGSMWGALLAGCVMH 389



 Score =  120 bits (300), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 167/367 (45%), Gaps = 7/367 (1%)

Query: 65  QLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSH 124
           Q H   L +    ++     LL  Y +   +  A KLFD+MP  N  S+  +    + + 
Sbjct: 21  QCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNS 80

Query: 125 QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
            +  AL V     + G   + +    + K+ + +D   + W  H  V K G++    V  
Sbjct: 81  MYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNN 140

Query: 185 SLIDAYSVCGNVDAARQVFDGIFC-KDMVSWTGMVGCYAENCFYEESLQLFCQMRVM--G 241
           S+++ Y  CG +  A  VF      +D  +W  M+  + +   Y E++  F +M     G
Sbjct: 141 SVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNG 200

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKA-CYDQDLYVGTELLELYAKSGDIVDA 300
              ++ T+ + L +C         K VHG  ++   +D D  +G  L++ Y K G + D+
Sbjct: 201 IELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDS 260

Query: 301 QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQ 360
           +  F+ +   +++ W+ MI+ Y    + +E++ LF  M      PN  T  ++L +C+  
Sbjct: 261 ENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHC 320

Query: 361 VLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPEQNEVTWN 417
            LL  GK+I  +++   GL+        ++D++++CG +E ++ L   M+S       W 
Sbjct: 321 GLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWG 380

Query: 418 TMIVGYV 424
            ++ G V
Sbjct: 381 ALLAGCV 387



 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 40/325 (12%)

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP 409
            +S+L+ C     +    Q H+  L   L  NV +   L+  Y K G I ++  LF + P
Sbjct: 6   LSSLLRTCKTHSTV---SQCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMP 62

Query: 410 EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQ 469
           ++N  +WN MI  Y        A+ +F +     + P   T   + +          G  
Sbjct: 63  QRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWM 122

Query: 470 VHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK-REEVSWNAMICGYSMHG 528
            H L +K  Y   + V N++++ Y KCG ++ A   F   +  R+  +WN MI G+   G
Sbjct: 123 CHGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAG 182

Query: 529 LSTEALNLFNKM--QQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE---- 582
           L +EA++ F +M   +   + + +T   +LSAC   G L K + +   + +++  +    
Sbjct: 183 LYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAP 242

Query: 583 ---PCIEHY------------------------TCMVGLLGRLGKFDEAVKLIGEI---P 612
                I++Y                        T M+   G  GK  E+V L  ++    
Sbjct: 243 IGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEG 302

Query: 613 FQPSVMVWRALLGACVVQKNIDLGR 637
           F+P+ +   A+L +C     +D G+
Sbjct: 303 FRPNAVTLTAILASCSHCGLLDQGK 327



 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 13/288 (4%)

Query: 43  DSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLF 102
           D ++   L + +I+      G   H  ++K G    +  +N +L FYV+   +  A  +F
Sbjct: 100 DCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSVF 159

Query: 103 -DEMPLTNTISFVTLAQGCSRSHQFDHALHVILRL--FKEGHEVNPFVCTTIIKLL-VSM 158
            +     ++ ++  +  G  ++  +  A+H    +  ++ G E++     +I+       
Sbjct: 160 SNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEG 219

Query: 159 DLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
           DL  V       V   G  ADA +G +LID Y  CG++  +  +F  +   ++V+WT M+
Sbjct: 220 DLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMI 279

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
            CY  +   +ES+ LF +M   G+RPN  T+TA L SC        GK + G  +    D
Sbjct: 280 SCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMIS---D 336

Query: 279 QDLYVGTE----LLELYAKSGDIVDAQLFFEEMPKKDVIP--WSLMIA 320
             L    E    +++L+++ G + +A    E M    V    W  ++A
Sbjct: 337 YGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLA 384


>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900570-37903619 | 20130731
          Length = 662

 Score =  273 bits (698), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 178/646 (27%), Positives = 312/646 (48%), Gaps = 94/646 (14%)

Query: 55  IQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDC-----LDDASKLFDEMPLTN 109
           +Q R     +QL  ++  R    D+ + N++++ Y  F C     +++  KLFD MP  +
Sbjct: 6   VQRREIAKARQLFDEMPLR----DIVSWNLIISGY--FSCRGSRFVEEGRKLFDIMPQRD 59

Query: 110 TISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIK-LLVSMDLPHVCWTIH 168
            +S+ T+  G +++ + D A+ +    F+   E N   C  ++   L++ D+        
Sbjct: 60  CVSWNTVISGYAKNGRMDQAIEI----FESMPERNVVSCNAVVNGFLLNGDVDSAV---- 111

Query: 169 ACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVF-----DGIFCKDMV-SWTGMVGCYA 222
              +++  + D+   + L+      G +D A ++      +G    D+V ++  ++  Y 
Sbjct: 112 -GFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYG 170

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLY 282
           +    EE+  +F                  + S  G           G   K    +++ 
Sbjct: 171 QRGMVEEARHVF----------------DGVMSDQG----------EGNEGKRRLKRNVV 204

Query: 283 VGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
               ++  Y K+GD+V A+  F+ M ++D   W+ +I  Y Q    +EA +LF  M    
Sbjct: 205 SWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM---- 260

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
            +P+  ++ S++                                     +++ G+++   
Sbjct: 261 PIPDVLSWNSIISG-----------------------------------FSQIGDLKRVK 285

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
             F   P +N ++WN++I GY +  D + A+ LFS M     +P   T SS+L    G  
Sbjct: 286 EFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLV 345

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWNAMI 521
            L  G Q+H    KT    D+ + N+LI MY++CG I DAR  F++M   ++ ++WNAMI
Sbjct: 346 DLYLGKQIHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 404

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            GY+ HG + +AL LF +M+    +P  +TF+ VL+AC++AGL+++G+  F SM  DY I
Sbjct: 405 GGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGI 464

Query: 582 EPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQ 641
           EP +EH+  +V +LGR G+  EA+ LI  +P +P   VW ALLGAC V  N+DL +  A+
Sbjct: 465 EPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAK 524

Query: 642 HVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPG 687
            ++ ++P     + LL N+YA   +WD+   VR  M+   VKK+ G
Sbjct: 525 ALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAG 570


>Medtr2g007570.1 | PPR containing plant-like protein | HC |
           chr2:1033154-1029007 | 20130731
          Length = 558

 Score =  272 bits (696), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 167/506 (33%), Positives = 275/506 (54%), Gaps = 17/506 (3%)

Query: 195 NVDAARQVFDGI-FCKDMVSWTGMVGCY-AENCFYEESLQLFCQMRVMGYRPNNYTITAA 252
           N+  A ++FD +  C +   WT ++  + + +  +   +  F +M   G  P+ +T +  
Sbjct: 62  NLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLV 121

Query: 253 LKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDV 312
           L +C  + A   GK VH   +++ +  +  V T LL++YAK G + DA+  F+ +  +DV
Sbjct: 122 LNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDV 181

Query: 313 IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSN 372
           + W+ MI  YA++ R  +A  LF  M +     N+FT+ +++   A    +    +++ +
Sbjct: 182 VAWTAMICGYAKAGRMVDARFLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELY-D 236

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQNEVTWNTMIVGYVQLGDGEK 431
           V+  G D   +V  A++  Y K G +  +  +F E +   N  T   ++  Y Q G   +
Sbjct: 237 VMN-GKDEVTWV--AMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHARE 293

Query: 432 AMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN---NDIAVANA 488
           A+ ++  M    ++ T+V     + ACA    +      +SLT             V+NA
Sbjct: 294 AIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIR---MSNSLTYNIEEGFCEKTHIVSNA 350

Query: 489 LIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPN 548
           LI M +KCG I+ A   F+ M  R+  +++AMI  ++ HG S +A++LF KMQQ   KPN
Sbjct: 351 LIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPN 410

Query: 549 KLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLI 608
           ++TFVGVL+ACS +GL+++G   F+ M++ Y IEP  EHYTCMV LLGR G+ ++A  LI
Sbjct: 411 QVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLI 470

Query: 609 GEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWD 668
            E         W +LL AC V  N++LG   A+H+ E+ P D G +VLL+N YA   +W+
Sbjct: 471 KENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWE 530

Query: 669 NVASVRKNMKRKGVKKEPGLSWVENQ 694
               V+K M +KG+KK  G SW++ +
Sbjct: 531 CAEEVKKLMSKKGMKKPSGYSWIQRE 556



 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 226/483 (46%), Gaps = 34/483 (7%)

Query: 64  KQLHCDILK---RGAPLDLFAHNI--LLNFYVQFDCLDDASKLFDEMP-LTNTISFVTLA 117
           KQ+H   LK   + AP   F   +  +L+F  +   L  A KLFD MP  +N   + +L 
Sbjct: 27  KQIHALFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLYYAHKLFDTMPNCSNCFIWTSLI 86

Query: 118 QGCSRSH-QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGH 176
           +     H  F H +    R+ ++G   + F  + ++     +        +HA + + G 
Sbjct: 87  RAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGFEGKQVHARLVQSGF 146

Query: 177 QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQ 236
             +  V T+L+D Y+ CG+V  AR VFDGI  +D+V+WT M+  YA+     ++  LF  
Sbjct: 147 LGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDN 206

Query: 237 MRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYA 292
              MG R N++T T  +    G   +G  K     A    YD    +D      ++  Y 
Sbjct: 207 ---MGER-NSFTWTTMVA---GYANYGDMK-----AAMELYDVMNGKDEVTWVAMIAGYG 254

Query: 293 KSGDIVDAQLFFEEMPKKDVIPW-----SLMIARYAQSDRSKEALELFHCMRQSSVVPNN 347
           K G++ +A+  F+E+     +PW     + ++A YAQ+  ++EA+E++  MR++ +   +
Sbjct: 255 KLGNVSEARRIFDEI----TVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTD 310

Query: 348 FTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME 407
                 + ACA    + +   +  N+ +   +    VSNAL+ + +KCG I+ +   F  
Sbjct: 311 VAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNI 370

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
              ++  T++ MI  + + G  + A++LF  M    ++P +VTF  VL AC+    ++ G
Sbjct: 371 MRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEG 430

Query: 468 LQVHSLTIKTRYNNDIAV-ANALIDMYAKCGRINDA-RLTFDKMDKREEVSWNAMICGYS 525
            +   +  +      +      ++D+  + G++  A  L  +     +  +W +++    
Sbjct: 431 CRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACR 490

Query: 526 MHG 528
           ++G
Sbjct: 491 VYG 493



 Score =  110 bits (275), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 176/385 (45%), Gaps = 38/385 (9%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
           GKQ+H  +++ G   +      LL+ Y +   + DA  +FD +   + +++  +  G ++
Sbjct: 134 GKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAK 193

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIK-------LLVSMDLPHVCWTIHACVYKRG 175
           + +   A      LF    E N F  TT++        +  +M+L           Y   
Sbjct: 194 AGRMVDARF----LFDNMGERNSFTWTTMVAGYANYGDMKAAMEL-----------YDVM 238

Query: 176 HQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW-----TGMVGCYAENCFYEES 230
           +  D     ++I  Y   GNV  AR++FD I     V W       ++ CYA+N    E+
Sbjct: 239 NGKDEVTWVAMIAGYGKLGNVSEARRIFDEI----TVPWNPSTCAALLACYAQNGHAREA 294

Query: 231 LQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLEL 290
           ++++ +MR    +  +  +  A+ +C  L    +  S+     +   ++   V   L+ +
Sbjct: 295 IEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHM 354

Query: 291 YAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTF 350
            +K G+I  A   F  M  +D+  +S MIA +A+  +S++A++LF  M+Q  + PN  TF
Sbjct: 355 QSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTF 414

Query: 351 ASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEIENSMILFME-S 408
             VL AC+   L+  G +    + ++ G++        ++D+  + G++E +  L  E S
Sbjct: 415 VGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENS 474

Query: 409 PEQNEVTWNTM-----IVGYVQLGD 428
              +  TW ++     + G V+LG+
Sbjct: 475 TSADATTWGSLLAACRVYGNVELGE 499


>Medtr3g063220.1 | PPR containing plant-like protein | HC |
           chr3:28610294-28607607 | 20130731
          Length = 546

 Score =  272 bits (695), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/436 (33%), Positives = 258/436 (59%), Gaps = 9/436 (2%)

Query: 250 TAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPK 309
            + L++C    A   G  +H     A   +++ + ++L+ LYA  G + DA   F++M K
Sbjct: 115 ASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTK 174

Query: 310 KDV--IPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGK 367
           +D+   PW+ +I+ YA+     +A+ L+  M +  V P+ FTF  VL+ C    L+ +G+
Sbjct: 175 RDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGE 234

Query: 368 QIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLG 427
           ++H +V++ G   + FV NAL+D+Y+KCG+I  +  +F +   ++ V+WN+M+ GYV+ G
Sbjct: 235 EVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHG 294

Query: 428 DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN 487
              +A+N+F  M+    +P   + S++L +    ++LD G+Q+H   I+     ++++AN
Sbjct: 295 LEVEAINIFRQMVLKGEKPDYFSISAILTSV---SSLDVGVQIHGWVIRQGVEWNLSIAN 351

Query: 488 ALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           +LI  Y+K GR++ AR  F+ M +R+ VSWN++I  +  H    EA++ F KM++    P
Sbjct: 352 SLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHCKH---PEAISYFEKMEEAGEVP 408

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKL 607
           +K+TFV +LSAC++ GL++ G+ LF  M + Y I+P +EHY CMV L GR G  ++A  +
Sbjct: 409 DKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSI 468

Query: 608 IGEIPFQP-SVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKR 666
           I  +  +     +W ALL AC++  N+ +G   A  + E++P ++   VLL  +Y  A R
Sbjct: 469 IVRMDSEAVGPTLWGALLYACLLHGNVTIGEISANKLFELEPDNEHNFVLLMKIYEKAGR 528

Query: 667 WDNVASVRKNMKRKGV 682
            +++  +R  M  +G+
Sbjct: 529 LEDMERIRMMMVDRGL 544



 Score =  165 bits (417), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 217/435 (49%), Gaps = 12/435 (2%)

Query: 137 FKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNV 196
            ++G +++P +  ++++        H    +H  +       +  + + L+  Y+  G +
Sbjct: 103 LEKGIKIDPEIYASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYM 162

Query: 197 DAARQVFDGIFCKDMVS--WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALK 254
           D A  +FD +  +DM +  W  ++  YAE   Y++++ L+ QM   G  P+ +T    LK
Sbjct: 163 DDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLK 222

Query: 255 SCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIP 314
            C G+   GVG+ VH   ++  +  D +V   L+++Y+K GDIV A+  F +M  +D + 
Sbjct: 223 VCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVS 282

Query: 315 WSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL 374
           W+ M+  Y +     EA+ +F  M      P+ F+ +++L + ++   L +G QIH  V+
Sbjct: 283 WNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSS---LDVGVQIHGWVI 339

Query: 375 KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
           + G++ N+ ++N+L+  Y+K G ++ +  +F   PE++ V+WN++I  + +     +A++
Sbjct: 340 RQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHCK---HPEAIS 396

Query: 435 LFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTI-KTRYNNDIAVANALIDMY 493
            F  M      P ++TF S+L ACA    ++ G ++ +L   K +    +     ++++Y
Sbjct: 397 YFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVNLY 456

Query: 494 AKCGRINDARLTFDKMDKRE--EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLT 551
            + G +  A     +MD        W A++    +HG  T      NK+ +     N+  
Sbjct: 457 GRAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGNVTIGEISANKLFELE-PDNEHN 515

Query: 552 FVGVLSACSNAGLLD 566
           FV ++     AG L+
Sbjct: 516 FVLLMKIYEKAGRLE 530



 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 196/389 (50%), Gaps = 21/389 (5%)

Query: 42  LDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNI-----LLNFYVQFDCLD 96
           +D   YA+LL+   +    + G  LH     R  P  L   N+     L+  Y  F  +D
Sbjct: 109 IDPEIYASLLETCYRFGAIHHGIWLH-----RLIPPALLHRNVGISSKLVRLYASFGYMD 163

Query: 97  DASKLFDEMPLTNTISFV--TLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKL 154
           DA  LFD+M   +  +F   +L  G +    +D A+ +  ++ +EG E + F    ++K+
Sbjct: 164 DAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKV 223

Query: 155 LVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
              + L  V   +H  V + G   D FV  +L+D YS CG++  AR++F+ +  +D VSW
Sbjct: 224 CGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSW 283

Query: 215 TGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK 274
             M+  Y  +    E++ +F QM + G +P+ ++I+A L S   L+   VG  +HG  ++
Sbjct: 284 NSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSLD---VGVQIHGWVIR 340

Query: 275 ACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALEL 334
              + +L +   L+  Y+K G +  A+  F  MP++DV+ W+ +I+ +    +  EA+  
Sbjct: 341 QGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHC---KHPEAISY 397

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL-KVGLDSNVFVSNALMDVYA 393
           F  M ++  VP+  TF S+L ACA   L+  G+++ + +  K  +   +     ++++Y 
Sbjct: 398 FEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVNLYG 457

Query: 394 KCGEIEN--SMILFMESPEQNEVTWNTMI 420
           + G +E   S+I+ M+S       W  ++
Sbjct: 458 RAGLVEKAYSIIVRMDSEAVGPTLWGALL 486



 Score =  141 bits (355), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 7/279 (2%)

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--ME 407
           +AS+L+ C     +  G  +H  +    L  NV +S+ L+ +YA  G ++++  LF  M 
Sbjct: 114 YASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMT 173

Query: 408 SPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
             +     WN++I GY ++G  + A+ L+  M+   ++P   TF  VL+ C G   +  G
Sbjct: 174 KRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVG 233

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
            +VH   ++  + +D  V NAL+DMY+KCG I  AR  F+KM  R+ VSWN+M+ GY  H
Sbjct: 234 EEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRH 293

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           GL  EA+N+F +M     KP+  +   +L++ S+   LD G  +   + +   +E  +  
Sbjct: 294 GLEVEAINIFRQMVLKGEKPDYFSISAILTSVSS---LDVGVQIHGWVIRQ-GVEWNLSI 349

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
              ++    + G+ D+A  +   +P +  V+ W +++ +
Sbjct: 350 ANSLIIAYSKHGRLDKARSIFNLMP-ERDVVSWNSIISS 387



 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 103/202 (50%), Gaps = 6/202 (2%)

Query: 430 EKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANAL 489
           E+ +N   + +   ++     ++S+L  C  F A+  G+ +H L      + ++ +++ L
Sbjct: 93  EQVLNDLEASLEKGIKIDPEIYASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKL 152

Query: 490 IDMYAKCGRINDARLTFDKMDKRE--EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKP 547
           + +YA  G ++DA   FD+M KR+     WN++I GY+  GL  +A+ L+ +M +   +P
Sbjct: 153 VRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEP 212

Query: 548 NKLTFVGVLSACSNAGLLDKGQSLFKSMSQ-DYNIEPCIEHYTCMVGLLGRLGKFDEAVK 606
           +  TF  VL  C   GL+  G+ + + + +  +  +  +     +V +  + G   +A K
Sbjct: 213 DIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFV--LNALVDMYSKCGDIVKARK 270

Query: 607 LIGEIPFQPSVMVWRALLGACV 628
           +  ++ F+ SV  W ++L   V
Sbjct: 271 IFNKMHFRDSV-SWNSMLTGYV 291


>Medtr4g119120.1 | PPR containing plant-like protein | HC |
           chr4:49335688-49337418 | 20130731
          Length = 576

 Score =  270 bits (690), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 169/522 (32%), Positives = 267/522 (51%), Gaps = 54/522 (10%)

Query: 210 DMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVH 269
           D  SW  ++  +++   + E++ L+ QMR +G  P+++ +++ LKSC  +E    G  +H
Sbjct: 68  DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIH 127

Query: 270 GCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSK 329
           G   K  +D  +YV T LL+LY K GD+V A+  F+EMP K+V+ W+ +++ Y +     
Sbjct: 128 GHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLD 187

Query: 330 EALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVS-NAL 388
           E    F  +    V+  N   +   +A         GK   +  L   +    F S N +
Sbjct: 188 EGQRFFDEIPLKDVISWNCMVSGYAKA---------GKMDRACYLFQQMPERNFASWNTM 238

Query: 389 MDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDM---- 444
           +  Y  CG I  +  LF   P +N V+  TMI GY + GD   A  LF  M   D+    
Sbjct: 239 ITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYN 298

Query: 445 -----------------------------QPTEVTFSSVLRACAGFAALDPGLQVHSLTI 475
                                         P ++T +SV+ AC+    L+     H   I
Sbjct: 299 AMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLE-----HWRWI 353

Query: 476 KTRYNN-----DIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLS 530
           +++ NN     D  +A ALID+YAKCG I+ A   F  + KR+ V+++AMI G  ++G +
Sbjct: 354 ESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRA 413

Query: 531 TEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTC 590
           ++A+ LF +M      PN +T+ G+L+A ++AGL ++G   F SM +D  I P ++HY  
Sbjct: 414 SDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISM-KDNGIVPSVDHYGI 472

Query: 591 MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHD 650
           MV LLGR G  DEA KLI ++P QP+V VW ALL AC +  N+ LG    QH ++++   
Sbjct: 473 MVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQHCIKLESET 532

Query: 651 DGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVE 692
            G + LLS +YA   +W++   +   ++ K + K PG SW +
Sbjct: 533 AGYYSLLSGIYATVGKWNDAKKLTTGVEGKKIIKIPGCSWTQ 574



 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 227/505 (44%), Gaps = 51/505 (10%)

Query: 63  GKQLHCDILKRGAP--LDLFAHNILLNFYVQFDCLDD-ASKLFDEMPLTNTISFVTLAQG 119
            KQ+H  I+         +F H ILL     +  + +    +   +   ++ S+  + + 
Sbjct: 19  AKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSILHHLRNPDSFSWGCVIRF 78

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQAD 179
            S+  QF  A+ + +++ + G   +    ++I+K    ++       IH  V+K G  A 
Sbjct: 79  FSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDAC 138

Query: 180 AFVGTSLIDAYSVCGNVDAARQV-------------------------------FDGIFC 208
            +V T+L+D Y   G+V  AR+V                               FD I  
Sbjct: 139 VYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPL 198

Query: 209 KDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSV 268
           KD++SW  MV  YA+    + +  LF QM    +   N  IT  +     +EA  +    
Sbjct: 199 KDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEAREL---- 254

Query: 269 HGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRS 328
                 A   ++      ++  Y+KSGD+  A+  F++M  KD++ ++ MIA YAQS + 
Sbjct: 255 ----FDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKP 310

Query: 329 KEALELFHCMRQ--SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSN 386
           KEAL+LF+ M +  SS+ P+  T ASV+ AC+    L   + I S +   G+  +  ++ 
Sbjct: 311 KEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLAT 370

Query: 387 ALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQP 446
           AL+D+YAKCG I+ +  LF    +++ V ++ MI G    G    A+ LF  M G  + P
Sbjct: 371 ALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIP 430

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVAN---ALIDMYAKCGRINDAR 503
             VT++ +L A       + G +     I  + N  +   +    ++D+  + G +++A 
Sbjct: 431 NLVTYTGILTAYNHAGLAEEGYRCF---ISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAY 487

Query: 504 LTFDKMDKREEVS-WNAMICGYSMH 527
               KM  +  V  W A++    +H
Sbjct: 488 KLIMKMPMQPNVGVWGALLLACRLH 512


>Medtr5g042450.1 | PPR containing plant-like protein | HC |
           chr5:18668534-18660865 | 20130731
          Length = 702

 Score =  270 bits (690), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 262/473 (55%), Gaps = 20/473 (4%)

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPE 410
           ++Q C     L   K +H  VL+      V     ++++Y +CG +++++ +F  M   E
Sbjct: 245 LMQLCGKAEFLEEAKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTE 304

Query: 411 QN--EVTWNTMIVGYVQLG-DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
           +   E   ++ + G V+   D  + +  F  ++  D          +++ C    +L+  
Sbjct: 305 RKLIEELDSSCMEGEVKEAIDVLQVLEKFHILVDLD------RCLRLMQQCGKTKSLEEA 358

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
             VH   ++      ++  N +++MY +CG ++DA   F  M +R+  +   MI   + +
Sbjct: 359 KVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKN 418

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           G + ++++LF + +++  KP+   F+GV  ACS  G + +G   F+SMS+DY+I P +EH
Sbjct: 419 GFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEH 478

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMK 647
           Y  +V ++G +G  DEA++ I ++P +PSV VW  L+ +C V  N +LG  CA+ V ++ 
Sbjct: 479 YVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLD 538

Query: 648 PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSH 707
           P        L+    V       + + KN K+    K P  + V N   +H +  GDTS 
Sbjct: 539 PSR------LNEKSKVGLLLIETSDITKNKKQN---KPPDNNPVGNMNRIHEYRAGDTSL 589

Query: 708 PDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPS 767
           P+N +I  +L  L  + ++AGY+ +    L DV+ ++KE  L  HSERLA+A GLL  P+
Sbjct: 590 PENNMIYVLLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 649

Query: 768 TCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
             +IR++KNLR+C DCHT +K+IS++V RE ++RD  RFHHF++G+CSC DYW
Sbjct: 650 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702



 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 9/262 (3%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
            K +H  +L+  +PL +     +L  Y Q   +DDA  +F  M +T       L   C  
Sbjct: 258 AKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKLIEELDSSCME 317

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
             +   A+ V+  L K    V+   C  +++             +H  V +         
Sbjct: 318 G-EVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVST 376

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
              +++ Y  CG+VD A  VF  +  +D+ +   M+   A+N F E+S+ LF Q +  G 
Sbjct: 377 CNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGL 436

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYAKSGDIV 298
           +P+         +C  L     G  +H  ++   YD     + YV   L+++    G + 
Sbjct: 437 KPDGQMFIGVFGACSMLGDIVEGM-LHFESMSRDYDIVPTMEHYVS--LVDMIGSIGHLD 493

Query: 299 DAQLFFEEMP-KKDVIPWSLMI 319
           +A  F E+MP +  V  W  ++
Sbjct: 494 EALEFIEKMPMEPSVEVWETLM 515



 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 138/317 (43%), Gaps = 28/317 (8%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT--SL 186
           A+ V+  L K    V+ ++C  +++L    +       +H  +Y   H +   V T   +
Sbjct: 223 AIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVH--IYVLQHLSPLTVRTCIRI 280

Query: 187 IDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNN 246
           ++ Y  CG+VD A  VF  +     ++   ++     +C   E  +    ++V+      
Sbjct: 281 LEMYFQCGSVDDAVNVFRNM----NMTERKLIEELDSSCMEGEVKEAIDVLQVL----EK 332

Query: 247 YTITAALKSCLGL-------EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
           + I   L  CL L       ++    K VH   L+      +     +LE+Y + G + D
Sbjct: 333 FHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDD 392

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A   F+ M ++D+    +MI + A++  ++++++LF   ++S + P+   F  V  AC+ 
Sbjct: 393 AVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSM 452

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSN--ALMDVYAKCGEIENSMILFMESPEQNEV-TW 416
              ++ G  +H   +    D    + +  +L+D+    G ++ ++    + P +  V  W
Sbjct: 453 LGDIVEG-MLHFESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVW 511

Query: 417 NTM-----IVGYVQLGD 428
            T+     + G  +LGD
Sbjct: 512 ETLMNSCRVHGNTELGD 528


>Medtr5g042450.2 | PPR containing plant-like protein | HC |
           chr5:18668534-18660865 | 20130731
          Length = 702

 Score =  270 bits (690), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 262/473 (55%), Gaps = 20/473 (4%)

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPE 410
           ++Q C     L   K +H  VL+      V     ++++Y +CG +++++ +F  M   E
Sbjct: 245 LMQLCGKAEFLEEAKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTE 304

Query: 411 QN--EVTWNTMIVGYVQLG-DGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG 467
           +   E   ++ + G V+   D  + +  F  ++  D          +++ C    +L+  
Sbjct: 305 RKLIEELDSSCMEGEVKEAIDVLQVLEKFHILVDLD------RCLRLMQQCGKTKSLEEA 358

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
             VH   ++      ++  N +++MY +CG ++DA   F  M +R+  +   MI   + +
Sbjct: 359 KVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKN 418

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           G + ++++LF + +++  KP+   F+GV  ACS  G + +G   F+SMS+DY+I P +EH
Sbjct: 419 GFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEH 478

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMK 647
           Y  +V ++G +G  DEA++ I ++P +PSV VW  L+ +C V  N +LG  CA+ V ++ 
Sbjct: 479 YVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLD 538

Query: 648 PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSH 707
           P        L+    V       + + KN K+    K P  + V N   +H +  GDTS 
Sbjct: 539 PSR------LNEKSKVGLLLIETSDITKNKKQN---KPPDNNPVGNMNRIHEYRAGDTSL 589

Query: 708 PDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHSERLALAFGLLRIPS 767
           P+N +I  +L  L  + ++AGY+ +    L DV+ ++KE  L  HSERLA+A GLL  P+
Sbjct: 590 PENNMIYVLLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 649

Query: 768 TCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGVCSCGDYW 820
             +IR++KNLR+C DCHT +K+IS++V RE ++RD  RFHHF++G+CSC DYW
Sbjct: 650 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702



 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 9/262 (3%)

Query: 63  GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSR 122
            K +H  +L+  +PL +     +L  Y Q   +DDA  +F  M +T       L   C  
Sbjct: 258 AKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKLIEELDSSCME 317

Query: 123 SHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFV 182
             +   A+ V+  L K    V+   C  +++             +H  V +         
Sbjct: 318 G-EVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVST 376

Query: 183 GTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGY 242
              +++ Y  CG+VD A  VF  +  +D+ +   M+   A+N F E+S+ LF Q +  G 
Sbjct: 377 CNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGL 436

Query: 243 RPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYAKSGDIV 298
           +P+         +C  L     G  +H  ++   YD     + YV   L+++    G + 
Sbjct: 437 KPDGQMFIGVFGACSMLGDIVEGM-LHFESMSRDYDIVPTMEHYVS--LVDMIGSIGHLD 493

Query: 299 DAQLFFEEMP-KKDVIPWSLMI 319
           +A  F E+MP +  V  W  ++
Sbjct: 494 EALEFIEKMPMEPSVEVWETLM 515



 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 138/317 (43%), Gaps = 28/317 (8%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT--SL 186
           A+ V+  L K    V+ ++C  +++L    +       +H  +Y   H +   V T   +
Sbjct: 223 AIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVH--IYVLQHLSPLTVRTCIRI 280

Query: 187 IDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNN 246
           ++ Y  CG+VD A  VF  +     ++   ++     +C   E  +    ++V+      
Sbjct: 281 LEMYFQCGSVDDAVNVFRNM----NMTERKLIEELDSSCMEGEVKEAIDVLQVL----EK 332

Query: 247 YTITAALKSCLGL-------EAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
           + I   L  CL L       ++    K VH   L+      +     +LE+Y + G + D
Sbjct: 333 FHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDD 392

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A   F+ M ++D+    +MI + A++  ++++++LF   ++S + P+   F  V  AC+ 
Sbjct: 393 AVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSM 452

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSN--ALMDVYAKCGEIENSMILFMESPEQNEV-TW 416
              ++ G  +H   +    D    + +  +L+D+    G ++ ++    + P +  V  W
Sbjct: 453 LGDIVEG-MLHFESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVW 511

Query: 417 NTM-----IVGYVQLGD 428
            T+     + G  +LGD
Sbjct: 512 ETLMNSCRVHGNTELGD 528


>Medtr1g040705.2 | PPR containing plant-like protein | HC |
           chr1:15076230-15082956 | 20130731
          Length = 613

 Score =  269 bits (688), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 219/367 (59%), Gaps = 9/367 (2%)

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           +++ C     L+    VH   ++      ++  N +++MY +CG ++DA   F  M++R+
Sbjct: 256 LMQLCGKAEFLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERD 315

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFK 573
             +   MI   + +G + ++++LF + +++  KP+   F+GV  ACS  G + +G   F+
Sbjct: 316 LTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFE 375

Query: 574 SMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNI 633
           SMS+DY I P +EHY  +V ++G +G  DEA++ I ++P +PSV VW  L+ +C V  N 
Sbjct: 376 SMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNT 435

Query: 634 DLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVEN 693
           +LG  CA+ V ++ P        L+    V+      + + KN K+    K P  + V N
Sbjct: 436 ELGDRCAELVEKLDP------SRLNEKSKVSLLLIETSDITKNKKQN---KPPDNNPVGN 486

Query: 694 QGVVHYFSVGDTSHPDNKLICAMLEWLNKKTRDAGYVPDCNAVLLDVEDDEKERHLWVHS 753
              +H +  GDTS P+N +I A+L  L  + ++AGY+ +    L DV+ ++KE  L  HS
Sbjct: 487 MNRIHEYRAGDTSLPENNMIYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHS 546

Query: 754 ERLALAFGLLRIPSTCSIRILKNLRICVDCHTVIKLISEVVQREIVVRDINRFHHFQHGV 813
           ERLA+A GLL  P+  +IR++KNLR+C DCHT +K+IS++V RE ++RD  RFHHF++G+
Sbjct: 547 ERLAIAKGLLNSPARSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGL 606

Query: 814 CSCGDYW 820
           CSC DYW
Sbjct: 607 CSCRDYW 613



 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 8/196 (4%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLID 188
           A+ V+  L K    V+ ++C  +++L    +       +H  V +            +++
Sbjct: 234 AIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVHRYVLQHLSPLKVSTCNGILE 293

Query: 189 AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYT 248
            Y  CG+VD A  VF  +  +D+ +   M+   A+N F E+S+ LF Q +  G +P+   
Sbjct: 294 MYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQM 353

Query: 249 ITAALKSCLGLEAFGVGKSVHGCALKACYD----QDLYVGTELLELYAKSGDIVDAQLFF 304
                 +C  L     G  +H  ++   Y+     + YV   ++++    G++ +A  F 
Sbjct: 354 FIGVFGACSMLGDIVEGM-LHFESMSRDYEIVPTMEHYVS--IVDMIGSIGNLDEALEFI 410

Query: 305 EEMP-KKDVIPWSLMI 319
           E+MP +  V  W  ++
Sbjct: 411 EKMPMEPSVEVWETLM 426



 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 353 VLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQN 412
           ++Q C     L   K +H  VL+      V   N ++++Y +CG +++++ +F    E++
Sbjct: 256 LMQLCGKAEFLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERD 315

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPG-LQVH 471
             T   MI    + G  E +++LF+    + ++P    F  V  AC+    +  G L   
Sbjct: 316 LTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFE 375

Query: 472 SLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVS-WNAMICGYSMHG 528
           S++        +    +++DM    G +++A    +KM     V  W  ++    +HG
Sbjct: 376 SMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHG 433


>Medtr5g038580.1 | PPR containing plant-like protein | HC |
           chr5:16954387-16952525 | 20130731
          Length = 620

 Score =  269 bits (688), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 301/606 (49%), Gaps = 42/606 (6%)

Query: 126 FDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTS 185
           +  AL++   L       N F    ++K   ++  P     +HA ++K G  +     T+
Sbjct: 16  YKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTA 75

Query: 186 LIDAYSV-CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
           LI +Y+    +   A ++FD +    + ++  ++   + N    +++ LF Q+     RP
Sbjct: 76  LIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRP 135

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFF 304
           N+ TI + L S   ++     + VH  A K   + D+YV T L+  Y+K G +V +   F
Sbjct: 136 NSVTIVSLL-SARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVF 194

Query: 305 EEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS-SVVPNNFTFASVLQACAAQVLL 363
           E +  K+V+ ++  ++   Q+   +   ++F  M  +    PN  T  SV+ ACA    +
Sbjct: 195 ENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNI 254

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
            LGKQ+H   +K+    +V V  +L+D+Y+KCG   ++  +F  S ++N +TWN+MI G 
Sbjct: 255 RLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGM 314

Query: 424 VQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRA------------------CAGFA--- 462
           +   + E+A+ LF  M+   + P   T++S++                    CAG A   
Sbjct: 315 MMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCL 374

Query: 463 --------------ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDK 508
                          L     +H   ++   + D  +A AL+D Y KCG ++ AR  FD+
Sbjct: 375 KILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQ 434

Query: 509 MDKR--EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLD 566
            D +  +   WNAMI GY  +G    A  +F +M     +PN  TFV VLSACS++G ++
Sbjct: 435 FDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIE 494

Query: 567 KGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           +G   F+ M + Y ++P  EH+ C+V LLGR G+  EA  L+ E+  +P   V+ +LLGA
Sbjct: 495 RGLRFFR-MIRKYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQELA-EPPASVFDSLLGA 552

Query: 627 CVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEP 686
           C    + +LG   A  +++++P +    V+LSN+YA   RW  V  +R  +  KG+ K  
Sbjct: 553 CRCYLDSNLGEEMAMKLIDIEPKNPAPLVVLSNIYAALGRWSEVERIRGLITDKGLDKNS 612

Query: 687 GLSWVE 692
           G+S +E
Sbjct: 613 GISMIE 618



 Score =  171 bits (433), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 225/507 (44%), Gaps = 46/507 (9%)

Query: 39  QPPLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYV-QFDCLDD 97
            P  ++ ++  LL+       P+  + LH  + K G          L+  Y         
Sbjct: 30  SPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAANTRSFHY 89

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
           A +LFDEMP     +F  +  G SR+     A+ +  ++       N     TI+ LL +
Sbjct: 90  ALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNS---VTIVSLLSA 146

Query: 158 MDL---PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSW 214
            D+    HV   +H    K G + D +V TSL+ AYS CG + ++ +VF+ +  K++V++
Sbjct: 147 RDVKNQSHV-QQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTY 205

Query: 215 TGMVGCYAENCFYEESLQLFCQMRV-MGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
              +    +N F+     +F  M + +  +PN  T+ + + +C  L    +GK VHG ++
Sbjct: 206 NAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSM 265

Query: 274 KACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALE 333
           K      + V T L+++Y+K G    A   F    K+++I W+ MIA    +  S+ A+E
Sbjct: 266 KLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVE 325

Query: 334 LFHCMRQSSVVPNNFTF-----------------------------------ASVLQACA 358
           LF  M    ++P++ T+                                    S+L  C 
Sbjct: 326 LFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCG 385

Query: 359 AQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILF--MESPEQNEVTW 416
              +L   K IH   L++ +D + F++ AL+D Y KCG +  +  +F   +    +   W
Sbjct: 386 DSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFW 445

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
           N MI GY   GD E A  +F  M+   +QP   TF SVL AC+    ++ GL+   +  K
Sbjct: 446 NAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMIRK 505

Query: 477 TRYNNDIAVANALIDMYAKCGRINDAR 503
              +        ++D+  + G++ +AR
Sbjct: 506 YGLDPKPEHFGCVVDLLGRAGQLGEAR 532



 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 4/375 (1%)

Query: 224 NCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV 283
           N  Y+E+L L+  +      PN +T    LK+C  L +    + +H    K  +    + 
Sbjct: 13  NGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHT 72

Query: 284 GTELLELYAKSGDIVDAQL-FFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS 342
            T L+  YA +       L  F+EMP+  +  ++ +++  +++    +A+ LF  +   +
Sbjct: 73  STALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWN 132

Query: 343 VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
           + PN+ T  S+L A   +    + +Q+H    K+G++ +V+VS +L+  Y+KCG + +S 
Sbjct: 133 IRPNSVTIVSLLSARDVKNQSHV-QQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSN 191

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN-DMQPTEVTFSSVLRACAGF 461
            +F     +N VT+N  + G +Q G      ++F  M  N + +P +VT  SV+ ACA  
Sbjct: 192 KVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATL 251

Query: 462 AALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMI 521
           + +  G QVH L++K    + + V  +L+DMY+KCG    A   F + +KR  ++WN+MI
Sbjct: 252 SNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMI 311

Query: 522 CGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNI 581
            G  M+  S  A+ LF +M      P+  T+  ++S  +  G+  +    F  M Q   +
Sbjct: 312 AGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKM-QCAGV 370

Query: 582 EPCIEHYTCMVGLLG 596
            PC++  T ++ + G
Sbjct: 371 APCLKILTSLLSVCG 385


>Medtr4g006900.1 | PPR containing plant-like protein | HC |
           chr4:850780-853131 | 20130731
          Length = 688

 Score =  268 bits (686), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 170/575 (29%), Positives = 289/575 (50%), Gaps = 9/575 (1%)

Query: 41  PLDSHSYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           P+++ ++++L+   I+    + GKQ+H  I   G   + F    L+  Y     L+DA K
Sbjct: 108 PVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALK 167

Query: 101 LFDEMPLTNTI-SFVTLAQGC----SRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLL 155
           LFDE+P  +++  +  L +G      R  Q+   +    ++ + G E+N +  +++IK  
Sbjct: 168 LFDELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSF 227

Query: 156 VSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGI--FCKDMVS 213
            +    +     HA + K G      + T LID Y  CG V  AR+VF+ I    +D+V 
Sbjct: 228 AAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVV 287

Query: 214 WTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCAL 273
           W  M+  ++ N    E L+    M   G  PN+  +T  L     +    +G+ VH   L
Sbjct: 288 WGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVL 347

Query: 274 KA-CYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEAL 332
           K   Y + + V + L+++Y K GD+  A+  F   P+++V+ W+ +++ YA   R ++AL
Sbjct: 348 KTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQAL 407

Query: 333 ELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVY 392
                M+Q    P+  T A+VL  CA    L  GKQIH+  LK     NV +S++L+ +Y
Sbjct: 408 RAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMY 467

Query: 393 AKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS 452
           +KCG +E S  LF +  ++N ++W  MI  Y++ G   +A+ +  SM  +  +P  V  S
Sbjct: 468 SKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMS 527

Query: 453 SVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKR 512
            +L  C     L  G ++H   +K  + +   V+  LI+MY   G ++ A L F  +  +
Sbjct: 528 RMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVK 587

Query: 513 EEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF 572
             ++W A+I  Y  + L   A++LF++M+     PN  TF  +LS C  AG ++    +F
Sbjct: 588 GSMTWTALIRAYEYNELYQGAIDLFDQMRSDRFSPNPFTFEVILSVCERAGFVNDASKIF 647

Query: 573 KSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKL 607
             M + Y IE   EH+  MV LL R G+ ++A + 
Sbjct: 648 NLMPK-YKIEASKEHFAIMVRLLTRYGQLEKAQRF 681



 Score =  223 bits (567), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 270/536 (50%), Gaps = 20/536 (3%)

Query: 105 MPL--TNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPH 162
           +PL   N IS     +  +R ++ + AL ++  + + G  VN    +++I   +  +   
Sbjct: 69  LPLHNKNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLS 128

Query: 163 VCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMV-SWT----GM 217
           +   IH  +   G + + F+ T L+  Y+ CG+++ A ++FD +  +  V  W     G 
Sbjct: 129 IGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGT 188

Query: 218 VGCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALK-AC 276
           V        Y + ++ + +MR +G   N Y+ ++ +KS     AF  G   H   +K   
Sbjct: 189 VVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGL 248

Query: 277 YDQDLYVGTELLELYAKSGDIVDAQLFFEEMP--KKDVIPWSLMIARYAQSDRSKEALEL 334
            D D+ + T L++LY K G +  A+  FEE+P  ++DV+ W  M++ ++ +   +E LE 
Sbjct: 249 VDSDI-LRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEY 307

Query: 335 FHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYA 393
              M +  + PN+     VL          LG+++H+ VLK       V V +AL+D+Y 
Sbjct: 308 VKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYC 367

Query: 394 KCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSS 453
           KCG++ ++  +F  SPE+N V W  ++ GY  +G  E+A+     M     +P  VT ++
Sbjct: 368 KCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVAT 427

Query: 454 VLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKRE 513
           VL  CA   AL+ G Q+H+  +K  +  +++++++L+ MY+KCG +  +   F  M++R 
Sbjct: 428 VLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRN 487

Query: 514 EVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLF- 572
            +SW AMI  Y  +G   EAL +   MQ +  +P+ +    +LS C    LL  G+ +  
Sbjct: 488 VISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHG 547

Query: 573 KSMSQDYNIEPCIEHYTC--MVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
           + + +D+       H+    ++ + G LG  D+A  +   +P + S M W AL+ A
Sbjct: 548 QILKRDFT----SVHFVSAELINMYGALGDVDKANLVFSAVPVKGS-MTWTALIRA 598


>Medtr7g033400.1 | PPR containing protein | HC |
           chr7:12012362-12010888 | 20130731
          Length = 486

 Score =  267 bits (683), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/430 (37%), Positives = 240/430 (55%), Gaps = 5/430 (1%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKS--GDIVDAQLFFEEMPKKDVIPWSLMIARYA 323
           K +H   +      D +  + L   +A S  G++  A   F  + K +   W+ +I R  
Sbjct: 56  KQIHAQMIITSRINDQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNSFMWNTLI-RAH 114

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA-QVLLILGKQIHSNVLKVGLDSNV 382
           Q  +   +L L+  MR+  V+P   TF  +L+AC++   +L   KQ+H++V+K GL  + 
Sbjct: 115 QQQQPHISLSLYIQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDC 174

Query: 383 FVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGN 442
            V N L+  Y+  G++ ++  +F E P +N   W TMI GY Q     +A++LF  M+  
Sbjct: 175 HVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVV 234

Query: 443 DMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
             +P   T +SVL  CA    L+ G ++H           + +  AL+ MYAK G I  A
Sbjct: 235 GFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTA 294

Query: 503 RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTN-CKPNKLTFVGVLSACSN 561
           R  FD+M +R  V+WNAMICG + HG   +AL LF  M++     PN +TFVGVLSAC +
Sbjct: 295 RKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCH 354

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
           AGL+D G+ +F SM   + IEP IEHY CMV LLGR GK  EA ++I  +P++P V++  
Sbjct: 355 AGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILG 414

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
           ALL A     N ++     + +L + PH+ G HV LSNMYA A +W  V+ +RK MK + 
Sbjct: 415 ALLAASKNNGNTEVAERVVKQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLRKMMKEEK 474

Query: 682 VKKEPGLSWV 691
           +KK PG S V
Sbjct: 475 LKKAPGWSLV 484



 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 181/347 (52%), Gaps = 20/347 (5%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYV--QFDCLDDASKLFDEMPLTNTISFVTLAQGCS 121
           KQ+H  ++      D FA + L + +    F  L+ AS++F  +   N+  + TL     
Sbjct: 56  KQIHAQMIITSRINDQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNSFMWNTLI---- 111

Query: 122 RSHQFDHALHVILRLFKE--------GHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYK 173
           R+HQ     H+ L L+ +        G    PF+      L  S  LPH C  +HA V K
Sbjct: 112 RAHQ-QQQPHISLSLYIQMRRHGVIPGKHTFPFLLKACSSL--SNVLPH-CKQVHAHVVK 167

Query: 174 RGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
            G   D  VG  L+  YSV G++  AR VFD I  K++  WT M+  YA+NC Y E+L L
Sbjct: 168 FGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDL 227

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAK 293
           F +M V+G+ PN  T+ + L  C       +G+ +H        +  + +GT L+ +YAK
Sbjct: 228 FERMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAK 287

Query: 294 SGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSS-VVPNNFTFAS 352
           +GDI+ A+  F+EMP+++V+ W+ MI   A     ++AL LF CM++   VVPN  TF  
Sbjct: 288 NGDILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVG 347

Query: 353 VLQACAAQVLLILGKQIHSNVLKV-GLDSNVFVSNALMDVYAKCGEI 398
           VL AC    L+ +G+++  ++  V G++  +     ++D+  + G++
Sbjct: 348 VLSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKL 394


>Medtr5g043780.1 | PPR containing plant-like protein | HC |
           chr5:19239453-19241320 | 20130731
          Length = 525

 Score =  264 bits (675), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/452 (34%), Positives = 234/452 (51%), Gaps = 37/452 (8%)

Query: 304 FEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLL 363
           FE++    V  ++ +I  +  +++ K AL++F  M QS + P+N+T   VL+AC      
Sbjct: 64  FEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDC 123

Query: 364 ILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGY 423
             GK IH    K+GL  +++V N+LM +Y   G++  +  +F E P  N V+W+ MI GY
Sbjct: 124 SFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGY 183

Query: 424 VQLGDGEKA-------------------------------MNLFSSMIGNDMQPTEVTFS 452
            ++GD + A                               + LF  M   D+ P E  F 
Sbjct: 184 AKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFV 243

Query: 453 SVLRACAGFAALDPGLQVHS-LTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDK 511
           S+L ACA   AL+ G+ +H  L         + ++ +L+DMYAKCG +  A+  FD M+ 
Sbjct: 244 SILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNM 303

Query: 512 REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
           R+ V WNAMI G +MHG    AL LF  M++   KP+ +TF+ V +ACS +G+  +G  L
Sbjct: 304 RDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLML 363

Query: 572 FKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP----FQPSVMVWRALLGAC 627
              M   YNI P  EHY C+V LL R G F+EA+ +I +I          + WRA L AC
Sbjct: 364 LDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSAC 423

Query: 628 VVQKNIDLGRFCAQHVLEMKPH-DDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEP 686
                  L    A+ VL++  H   G +VLLSN+YA + +  +   VR  MK KG  K P
Sbjct: 424 CNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAP 483

Query: 687 GLSWVENQGVVHYFSVGDTSHPDNKLICAMLE 718
           G S VE  GV+  F  G+ +HP  + I ++L+
Sbjct: 484 GCSSVEIDGVISEFIAGEKTHPQMEEIHSVLK 515



 Score =  159 bits (403), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 193/412 (46%), Gaps = 60/412 (14%)

Query: 168 HACVYKRGHQADAFVGTSLIDAYSVCGN-------VDAARQVFDGIFCKDMVSWTGMVGC 220
           HA V+  G + + F   +L    + C +       +  A +VF+ I    +  +  ++  
Sbjct: 25  HAQVFTTGLENNTF---ALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVCIYNTLIKA 81

Query: 221 YAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           +  N  ++ +LQ+F +M     +P+NYTI   LK+C        GK +HG + K     D
Sbjct: 82  FLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFD 141

Query: 281 LYVGTELLEL-------------------------------YAKSGDIVDAQLFFEEMPK 309
           +YVG  L+ +                               YAK GD+  A+LFF+E P+
Sbjct: 142 IYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPE 201

Query: 310 KDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQI 369
           KD   W  MI+ Y Q+   KE+L LF  M+ + +VP+   F S+L ACA    L +G  I
Sbjct: 202 KDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWI 261

Query: 370 HSNVLKVGL-DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGD 428
           H ++ ++ L   +V +S +L+D+YAKCG +E +  LF     ++ V WN MI G    GD
Sbjct: 262 HQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGD 321

Query: 429 GEKAMNLFSSMIGNDMQPTEVTFSSVLRACA-------GFAALDPGLQVHSLTIKTRYNN 481
           G+ A+ LF  M    ++P ++TF +V  AC+       G   LD    V+++  K+ +  
Sbjct: 322 GKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEH-- 379

Query: 482 DIAVANALIDMYAKCGRINDARLTFDKMD-----KREEVSWNAMICGYSMHG 528
                  L+D+ ++ G   +A +   K+        E ++W A +     HG
Sbjct: 380 ----YGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHG 427



 Score =  111 bits (278), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 175/392 (44%), Gaps = 65/392 (16%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYV----QFDCLDDASKLFDEMPLTNTISFVTLAQG 119
           KQ H  +   G   + FA + +L F        + L  A ++F+++       + TL + 
Sbjct: 22  KQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVCIYNTLIKA 81

Query: 120 CSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVY------- 172
              +++F  AL V +++ +   + + +    ++K          C T H C +       
Sbjct: 82  FLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLK---------ACGTFHDCSFGKMIHGY 132

Query: 173 --KRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA-------- 222
             K G   D +VG SL+  Y V G+V AAR VFD I   ++VSW+ M+  YA        
Sbjct: 133 SSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSA 192

Query: 223 -----------------------ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGL 259
                                  +N  ++ESL LF  M++    P+     + L +C  L
Sbjct: 193 RLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHL 252

Query: 260 EAFGVGKSVHG--CALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSL 317
            A  +G  +H     LK      + + T LL++YAK G++  A+  F+ M  +DV+ W+ 
Sbjct: 253 GALEIGVWIHQHLNQLKLV-PLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNA 311

Query: 318 MIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC-----AAQVLLILGKQIHSN 372
           MI+  A     K AL+LF+ M +  V P++ TF +V  AC     A + L++L K    +
Sbjct: 312 MISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKM--CS 369

Query: 373 VLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           V  +   S  +    L+D+ ++ G  E +M++
Sbjct: 370 VYNIVPKSEHY--GCLVDLLSRAGLFEEAMVM 399


>Medtr4g108030.1 | PPR containing plant-like protein | HC |
           chr4:44776233-44777913 | 20130731
          Length = 544

 Score =  261 bits (667), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/550 (30%), Positives = 269/550 (48%), Gaps = 64/550 (11%)

Query: 167 IHACVYKRGHQADAFVGTSLI--DAYSVCGNVDAARQVF--DGIFCKDMVSWTGMVGCYA 222
           + A + K G  +   + T LI   A S  GN+  A  +F    I   +      M+  ++
Sbjct: 25  LQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNTMIRAFS 84

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC-----LGLEA-------------FGV 264
            +CF  ++L ++ QM +     ++YT    LK+C     L  E+             +  
Sbjct: 85  HSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDDDNLVVVYNK 144

Query: 265 GKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQ 324
           G  +H   +K  +  D  V   LL  Y++ G +  A+  F+++    ++ W++MI+ Y +
Sbjct: 145 GTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDR 204

Query: 325 SDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFV 384
            D  + A  L   M   +V+                                        
Sbjct: 205 VDDYELADHLLELMPCKTVIS--------------------------------------- 225

Query: 385 SNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDM 444
            N L+  Y + G+++ +  +F   PE+N V+WN+MI G V + D   A+ LFS M    +
Sbjct: 226 WNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGV 285

Query: 445 QPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARL 504
           +PTEVT  S+L ACA   AL+ G +++       +  +  + NAL++MY KCG ++ A  
Sbjct: 286 KPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWE 345

Query: 505 TFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT---NCKPNKLTFVGVLSACSN 561
            F+ M  +    WNAM+ G ++HG   E   LF +M+++   + +P+++TF+GVL ACS+
Sbjct: 346 IFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSH 405

Query: 562 AGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWR 621
            GL+DK +  F  M + Y I P  +HY CMV LL R G  +EA ++I   PFQ SV++WR
Sbjct: 406 KGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWR 465

Query: 622 ALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKG 681
            LLGAC  Q N +L     + + ++K   DG +VLLSN+YA A RWD V  +R  M    
Sbjct: 466 TLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLH 525

Query: 682 VKKEPGLSWV 691
           V ++ G S +
Sbjct: 526 VPRQAGYSQI 535



 Score = 68.2 bits (165), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE 142
           N L+  Y++   +  A ++F  MP  N +S+ ++  GC     +  AL +   +   G +
Sbjct: 227 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 286

Query: 143 VNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQV 202
                  +I+          +   I+  +    H+ ++++G +L++ Y  CGN+  A ++
Sbjct: 287 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 346

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM---GYRPNNYTITAALKSC 256
           F+G+  K +  W  MV   A + + EE  QLF +M        RP+  T    L +C
Sbjct: 347 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVAC 403


>Medtr2g028240.1 | PPR containing plant-like protein | HC |
           chr2:10416867-10418417 | 20130731
          Length = 516

 Score =  261 bits (667), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 259/468 (55%), Gaps = 16/468 (3%)

Query: 230 SLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLE 289
           +  LF  +R +    +++T T  L+         +GK +H   +K   D      T LL+
Sbjct: 46  AFNLFLSLRRIRIDLDSHTFTPLLRP----SPTSLGKQLHSQMIKTGSDSGTVPKTALLD 101

Query: 290 LYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFT 349
           +Y++ G +  +   F+EM  +DV+ W+ +++ + +  +  EA+ +   M + +V  + FT
Sbjct: 102 MYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFT 161

Query: 350 FASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFME-S 408
             SVL+ CA+   L  G+Q+H  V+ +G D  V +S AL+D Y+  G + +++ +F    
Sbjct: 162 LCSVLKCCASLKALEFGRQVHGLVVAMGRDL-VVLSTALIDFYSSVGCVHHALNVFYGLK 220

Query: 409 PEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGL 468
             ++++  N+++ G ++ G   +A  + S      ++P  V  +SVL  C+  + L  G 
Sbjct: 221 GWKDDMIHNSLVSGCIKNGRYREAFKVMSL-----VKPNAVALTSVLVCCSEESDLLTGK 275

Query: 469 QVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHG 528
           QVH + ++  +  +  + N L+DMYAKCG+I  A   FD + +++ +SW  MI GY  +G
Sbjct: 276 QVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNG 335

Query: 529 LSTEALNLFNKMQQTNCK--PNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIE 586
              EA+ LF KM +   +  PN +TF+ VLSAC ++GL+++G+  F  M + Y I+P  E
Sbjct: 336 CGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPE 395

Query: 587 HYTCMVGLLGRLGKFDE---AVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHV 643
           HY C + +LGR GK +E   A + + +    P+  VW +LL AC + ++ + G F A+ +
Sbjct: 396 HYACFIDILGRAGKIEEVWSAYQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSL 455

Query: 644 LEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWV 691
           L+++P+     VL SN YA   RWD V  +R  M+ KG+ KE G SW+
Sbjct: 456 LQLEPNKASNIVLASNFYAAIGRWDCVGELRSMMREKGLVKEAGNSWI 503



 Score =  146 bits (368), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 207/423 (48%), Gaps = 48/423 (11%)

Query: 167 IHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCF 226
           +H+ + K G  +     T+L+D YS  G+++++ +VFD +  +D+V+W  ++ C+     
Sbjct: 80  LHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGK 139

Query: 227 YEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYV-GT 285
            +E++++  +M       + +T+ + LK C  L+A   G+ VHG  L     +DL V  T
Sbjct: 140 PDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHG--LVVAMGRDLVVLST 197

Query: 286 ELLELYAKSGDIVDA-QLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVV 344
            L++ Y+  G +  A  +F+     KD +  + +++   ++ R +EA ++      S V 
Sbjct: 198 ALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVM-----SLVK 252

Query: 345 PNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSMIL 404
           PN     SVL  C+ +  L+ GKQ+H   ++ G      + N L+D+YAKCG+I  +  +
Sbjct: 253 PNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSV 312

Query: 405 FMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMI--GNDMQPTEVTFSSVLRACAGFA 462
           F    +++ ++W  MI GY + G G +A+ LF  M+  G+++ P  VTF SVL AC    
Sbjct: 313 FDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSG 372

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKREEVSWNAM 520
            ++ G Q  ++ +K +Y  D    +    ID+  + G+I             EEV W+A 
Sbjct: 373 LVEEGKQCFNI-MKEKYGIDPEPEHYACFIDILGRAGKI-------------EEV-WSA- 416

Query: 521 ICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYN 580
                           +  M      P    ++ +L+ACS     ++G+   KS+ Q   
Sbjct: 417 ----------------YQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSLLQ--- 457

Query: 581 IEP 583
           +EP
Sbjct: 458 LEP 460



 Score =  144 bits (364), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 20/365 (5%)

Query: 42  LDSHSYAALLQQAIQNRHPNA-GKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASK 100
           LDSH++  LL+ +     P + GKQLH  ++K G+         LL+ Y +   L+ + K
Sbjct: 60  LDSHTFTPLLRPS-----PTSLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLK 114

Query: 101 LFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDL 160
           +FDEM   + +++ TL     R  + D A+ V+  + +E  E++ F   +++K   S+  
Sbjct: 115 VFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKA 174

Query: 161 PHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGI--FCKDMVSWTGMV 218
                 +H  V   G      + T+LID YS  G V  A  VF G+  +  DM+  + + 
Sbjct: 175 LEFGRQVHGLVVAMGRDL-VVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVS 233

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
           GC  +N  Y E+ ++   +     +PN   +T+ L  C        GK VH  A++  + 
Sbjct: 234 GCI-KNGRYREAFKVMSLV-----KPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFT 287

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
            +  +   LL++YAK G I+ A   F+ + +KDVI W+ MI  Y ++    EA+ELF  M
Sbjct: 288 FETQLCNVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKM 347

Query: 339 RQ--SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVL--KVGLDSNVFVSNALMDVYAK 394
            +  S V+PN+ TF SVL AC    L+  GKQ   N++  K G+D         +D+  +
Sbjct: 348 MEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCF-NIMKEKYGIDPEPEHYACFIDILGR 406

Query: 395 CGEIE 399
            G+IE
Sbjct: 407 AGKIE 411



 Score =  113 bits (283), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 166/344 (48%), Gaps = 26/344 (7%)

Query: 318 MIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVG 377
           +I  Y +      A  LF  +R+  +  ++ TF  +L+         LGKQ+HS ++K G
Sbjct: 33  LITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRPSPTS----LGKQLHSQMIKTG 88

Query: 378 LDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFS 437
            DS      AL+D+Y++ G + +S+ +F E   ++ V WNT++  +++ G  ++A+ +  
Sbjct: 89  SDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLR 148

Query: 438 SMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCG 497
            M   +++ +E T  SVL+ CA   AL+ G QVH L +     + + ++ ALID Y+  G
Sbjct: 149 EMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMG-RDLVVLSTALIDFYSSVG 207

Query: 498 RINDARLTFDKMDK-REEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVL 556
            ++ A   F  +   ++++  N+++ G   +G   EA  + + +     KPN +    VL
Sbjct: 208 CVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVMSLV-----KPNAVALTSVL 262

Query: 557 SACS-NAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
             CS  + LL   Q    ++ Q +  E   +    ++ +  + GK  +A  +   I FQ 
Sbjct: 263 VCCSEESDLLTGKQVHCVAVRQGFTFE--TQLCNVLLDMYAKCGKILQAWSVFDGI-FQK 319

Query: 616 SVMVWRALLGACVVQKNIDLGR-FCAQHVLEM--KPHDDGTHVL 656
            V+ W  ++           GR  C    +E+  K  +DG+ VL
Sbjct: 320 DVISWTCMIDG--------YGRNGCGYEAVELFWKMMEDGSEVL 355



 Score = 76.6 bits (187), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 36/251 (14%)

Query: 417 NTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIK 476
           N++I  Y++ G    A NLF S+    +     TF+ +LR     +    G Q+HS  IK
Sbjct: 31  NSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRP----SPTSLGKQLHSQMIK 86

Query: 477 TRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNL 536
           T  ++      AL+DMY++ G +N +   FD+M  R+ V+WN ++  +   G   EA+ +
Sbjct: 87  TGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRV 146

Query: 537 FNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQ---SLFKSMSQD-----------YNIE 582
             +M + N + ++ T   VL  C++   L+ G+    L  +M +D           Y+  
Sbjct: 147 LREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDLVVLSTALIDFYSSV 206

Query: 583 PCIEH-YTCMVGLLG---------------RLGKFDEAVKLIGEIPFQPSVMVWRALLGA 626
            C+ H      GL G               + G++ EA K++  +  +P+ +   ++L  
Sbjct: 207 GCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVMSLV--KPNAVALTSVLVC 264

Query: 627 CVVQKNIDLGR 637
           C  + ++  G+
Sbjct: 265 CSEESDLLTGK 275


>Medtr8g065040.1 | PPR containing plant-like protein | HC |
           chr8:27316294-27314321 | 20130731
          Length = 657

 Score =  261 bits (666), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 307/620 (49%), Gaps = 8/620 (1%)

Query: 79  LFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFK 138
           ++ +N  ++ +++ +  + A  LF  M + +T+++  L        +    L+  + L++
Sbjct: 37  VYINNRQIDAFIKSNNPNSALDLFHNMQIRDTVTYNLLISSSCLPPKKAFQLYSEMGLYR 96

Query: 139 EGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDA 198
                  F   +++ L  +         +H+ V K G   + FVG +L+  Y   G    
Sbjct: 97  IRETATTF--ASVVALCTNNGFCREGSQVHSRVVKFGFLNNVFVGGALVGFYMNLGLSGV 154

Query: 199 ARQVFDGIFCKDMVSWTGMVGCYAE-NCF-YEESLQLFCQMRVMGYRPNNYTITAALKSC 256
           A ++FD +  +++  W  M   + E  C   EE L  + +M   G   N  T    L+ C
Sbjct: 155 ALKLFDELSERNLGVWNVMFRGFCEMGCVEVEELLGFYARMCFEGVEANGVTFCYLLRGC 214

Query: 257 LGLEAFGVGKSVHGCALKACY-DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPW 315
                F  G+ +H C LK  + + +++V   L++ Y+  G  V A+  FE +  +DVI W
Sbjct: 215 SSKRRFHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSARKCFEGIKVEDVISW 274

Query: 316 SLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK 375
           + M++ YA ++   +ALE F+ M+     P+  +F   L  C+    + LGKQIH  V+K
Sbjct: 275 NSMVSVYADNNLVNDALEFFNFMQMWGHRPSVRSFIGFLNLCSRNKEIGLGKQIHCCVMK 334

Query: 376 VGLDS-NVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMN 434
            G D  +V+V +AL+D+Y KC +I++S+ +F   P+      N+++      G  E  + 
Sbjct: 335 FGFDERSVYVQSALIDMYGKCLDIQSSVNVFEWLPKMTLECCNSLMTSLSHCGCVEDVVE 394

Query: 435 LFSSMIGNDMQPTEVTFSSVLRA--CAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDM 492
           LF  M+   + P EVT S+ L+A   +  A+      +H   +K+    D  V  +L+D 
Sbjct: 395 LFGLMVDEGLMPDEVTVSTTLKALSVSASASFTSSQSLHCFALKSGVEGDTTVLCSLMDA 454

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQTNCKPNKLTF 552
           Y++CG    +   F+ +     + + +MI GY+ +G+  E L L + M +   KP+++TF
Sbjct: 455 YSRCGHWELSHRIFETIPTPNAICFTSMINGYARNGMGKEGLLLLHAMIEKGVKPDEVTF 514

Query: 553 VGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIP 612
           +  L+ CS+ GL+ +G+ LF SM   + + P   H +CMV LL R G   EA + + +  
Sbjct: 515 LCALTGCSHTGLIQQGRILFNSMKSLHGVHPDRRHISCMVDLLCRAGLLHEAEEFLLKAQ 574

Query: 613 FQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVAS 672
            +    +W +LL +C V KN ++G   AQ ++++ P+D    +  SN YA   ++D    
Sbjct: 575 GKGDCFMWSSLLQSCRVYKNEEVGTRAAQMLVDLHPNDPAVWLQTSNFYAEVGKFDESRQ 634

Query: 673 VRKNMKRKGVKKEPGLSWVE 692
           +R     + + +E G S +E
Sbjct: 635 LRDVALARKMSREIGCSLIE 654



 Score =  190 bits (483), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 230/464 (49%), Gaps = 7/464 (1%)

Query: 46  SYAALLQQAIQNRHPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEM 105
           ++A+++     N     G Q+H  ++K G   ++F    L+ FY+       A KLFDE+
Sbjct: 103 TFASVVALCTNNGFCREGSQVHSRVVKFGFLNNVFVGGALVGFYMNLGLSGVALKLFDEL 162

Query: 106 PLTNTISFVTLAQGCSRSH--QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHV 163
              N   +  + +G       + +  L    R+  EG E N      +++   S    H 
Sbjct: 163 SERNLGVWNVMFRGFCEMGCVEVEELLGFYARMCFEGVEANGVTFCYLLRGCSSKRRFHE 222

Query: 164 CWTIHACVYKRGH-QADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYA 222
              IH+CV K G  + + FV  +L+D YS CG   +AR+ F+GI  +D++SW  MV  YA
Sbjct: 223 GEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSARKCFEGIKVEDVISWNSMVSVYA 282

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQ-DL 281
           +N    ++L+ F  M++ G+RP+  +    L  C   +  G+GK +H C +K  +D+  +
Sbjct: 283 DNNLVNDALEFFNFMQMWGHRPSVRSFIGFLNLCSRNKEIGLGKQIHCCVMKFGFDERSV 342

Query: 282 YVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQS 341
           YV + L+++Y K  DI  +   FE +PK  +   + ++   +     ++ +ELF  M   
Sbjct: 343 YVQSALIDMYGKCLDIQSSVNVFEWLPKMTLECCNSLMTSLSHCGCVEDVVELFGLMVDE 402

Query: 342 SVVPNNFTFASVLQA--CAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
            ++P+  T ++ L+A   +A       + +H   LK G++ +  V  +LMD Y++CG  E
Sbjct: 403 GLMPDEVTVSTTLKALSVSASASFTSSQSLHCFALKSGVEGDTTVLCSLMDAYSRCGHWE 462

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
            S  +F   P  N + + +MI GY + G G++ + L  +MI   ++P EVTF   L  C+
Sbjct: 463 LSHRIFETIPTPNAICFTSMINGYARNGMGKEGLLLLHAMIEKGVKPDEVTFLCALTGCS 522

Query: 460 GFAALDPG-LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDA 502
               +  G +  +S+      + D    + ++D+  + G +++A
Sbjct: 523 HTGLIQQGRILFNSMKSLHGVHPDRRHISCMVDLLCRAGLLHEA 566


>Medtr3g466010.1 | PPR containing plant-like protein | HC |
           chr3:27120018-27122473 | 20130731
          Length = 536

 Score =  260 bits (665), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 148/432 (34%), Positives = 221/432 (51%), Gaps = 38/432 (8%)

Query: 338 MRQSSVVPNNFTFASVLQACAAQ---VLLILGKQIHSNVLKVGLDSNVFVSNALMDVY-- 392
           MR+  +  N  TF  +L AC        ++ G Q+H +V+K+G   NVFV NAL+  Y  
Sbjct: 98  MRRRFLNANQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFE 157

Query: 393 ---------------------------------AKCGEIENSMILFMESPEQNEVTWNTM 419
                                             + GE+ ++  +F E P+++ V+W++M
Sbjct: 158 GFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSM 217

Query: 420 IVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRY 479
           I+GYVQ G  E  +  F  M    ++P E    ++L A A    L  G  VHS     R+
Sbjct: 218 IMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRF 277

Query: 480 NNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNK 539
              +A+   L+DMYAKCG I ++R  FD M +R+  +W  MICG + H  + EAL LF +
Sbjct: 278 RISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFRE 337

Query: 540 MQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLG 599
             +   +P  + FVGVL+ACS AGL+ +G+  FK M   Y I P +EHY CMV L  R G
Sbjct: 338 FIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAG 397

Query: 600 KFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSN 659
             DEAV+LI  +  +P  ++W  LL AC +   +++G      +++M P  DG +V L+ 
Sbjct: 398 LIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKLIKMDPTHDGHYVQLAG 457

Query: 660 MYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEW 719
           +YA +++WD+V  VR+ M  +   K  G S +E +  VH F  GD  H  +  I  MLE 
Sbjct: 458 IYAKSRKWDDVVRVRRLMVERVPIKVAGWSLIEVEDRVHRFVAGDRDHDHSSDIYKMLEI 517

Query: 720 LNKKTRDAGYVP 731
           +     +AG  P
Sbjct: 518 IGLMVSEAGCSP 529



 Score =  132 bits (332), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 151/344 (43%), Gaps = 40/344 (11%)

Query: 237 MRVMGYRPNNYTITAALKSCL-GLEAFGV--GKSVHGCALKACYDQDLYVGTELLELY-- 291
           MR      N +T T  L +C  G + F +  G  VH   +K  Y  +++V   L+  Y  
Sbjct: 98  MRRRFLNANQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFE 157

Query: 292 ---------------------------------AKSGDIVDAQLFFEEMPKKDVIPWSLM 318
                                             + G++ DA+  F+EMPK+DV+ WS M
Sbjct: 158 GFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSM 217

Query: 319 IARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGL 378
           I  Y Q+ + ++ LE F  MR+  + PN     ++L A A   LL  G+ +HS +  +  
Sbjct: 218 IMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRF 277

Query: 379 DSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSS 438
             +V +   L+D+YAKCG IE S  LF    E++  TW  MI G       ++A+ LF  
Sbjct: 278 RISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFRE 337

Query: 439 MIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR-YNNDIAVANALIDMYAKCG 497
            I    +P  V F  VL AC+    +  G     L +     + ++     ++D++A+ G
Sbjct: 338 FIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAG 397

Query: 498 RINDA-RLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKM 540
            I++A RL      + + V W  ++    +HG       + NK+
Sbjct: 398 LIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKL 441



 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 9/277 (3%)

Query: 178 ADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM 237
           +D     S++      G V  A ++FD +  +D+VSW+ M+  Y +N   E+ L+ F  M
Sbjct: 178 SDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLM 237

Query: 238 RVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDI 297
           R  G RPN   +   L +   L   G G+ VH       +   + +GT L+++YAK G I
Sbjct: 238 REKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCI 297

Query: 298 VDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQAC 357
            +++  F+ M ++D+  W++MI   A  DR+KEAL LF    +    P N  F  VL AC
Sbjct: 298 EESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNAC 357

Query: 358 AAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGEIENSMILFME-SPEQNEVT 415
           +   L+  G+     ++   G+   +     ++D++A+ G I+ ++ L    + E + V 
Sbjct: 358 SRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVM 417

Query: 416 WNTM-----IVGYVQLGD--GEKAMNLFSSMIGNDMQ 445
           W T+     I G+V++G+  G K + +  +  G+ +Q
Sbjct: 418 WATLLDACEIHGFVEMGEKIGNKLIKMDPTHDGHYVQ 454



 Score = 92.4 bits (228), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/377 (20%), Positives = 160/377 (42%), Gaps = 81/377 (21%)

Query: 43  DSHSYAALLQQAIQNR---HPNAGKQLHCDILKRGAPLDLFAHNILLNFYVQ-FD----- 93
           + H++  LL    + +   +  +G Q+H  ++K G   ++F  N L++FY + FD     
Sbjct: 106 NQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYA 165

Query: 94  -----------CLD------------------DASKLFDEMPLTNTISFVTLAQGCSRSH 124
                      C D                  DA K+FDEMP  + +S+ ++  G  ++ 
Sbjct: 166 KRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNG 225

Query: 125 QFDHALHVILRLFKEGHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGT 184
           + +  L     + ++G   N  +  T++     + L      +H+ +     +    +GT
Sbjct: 226 KLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGT 285

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRP 244
            L+D Y+ CG ++ +R +FDG+  +D+ +WT M+   A +   +E+L LF +    G+RP
Sbjct: 286 GLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRP 345

Query: 245 NNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFF 304
            N      L +C                                   +++G + + + +F
Sbjct: 346 VNVIFVGVLNAC-----------------------------------SRAGLVSEGRYYF 370

Query: 305 EEMP-----KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           + M        ++  +  M+  +A++    EA+ L   M   +V P+   +A++L AC  
Sbjct: 371 KLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETM---TVEPDPVMWATLLDACEI 427

Query: 360 QVLLILGKQIHSNVLKV 376
              + +G++I + ++K+
Sbjct: 428 HGFVEMGEKIGNKLIKM 444


>Medtr4g074470.1 | PPR containing plant-like protein | HC |
           chr4:28370337-28367680 | 20130731
          Length = 542

 Score =  259 bits (663), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 167/548 (30%), Positives = 268/548 (48%), Gaps = 62/548 (11%)

Query: 167 IHACVYKRGHQADAFVGTSLI--DAYSVCGNVDAARQVF--DGIFCKDMVSWTGMVGCYA 222
           + A + K G  +   + T LI   A S  GN+  A  +F    I   +      M+  ++
Sbjct: 25  LQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNTMIRAFS 84

Query: 223 ENCFYEESLQLFCQMRVMGYRPNNYTITAALKSC-----LGLEA-----------FGVGK 266
            +CF  ++L ++ QM +     ++YT    LK+C     L  E+           +  G 
Sbjct: 85  HSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDNLVVVYNKGT 144

Query: 267 SVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSD 326
            +H   +K  +  D  V   LL  Y++ G +  A+  F+++    ++ W++MI+ Y   +
Sbjct: 145 EIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVN 204

Query: 327 RSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSN 386
             + A  L   M   +VV                                         N
Sbjct: 205 DYESADYLLELMPCKTVVS---------------------------------------WN 225

Query: 387 ALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQP 446
            L+  Y + G+++ +  +F   PE+N V+WN+MI G V + D   A+ LFS M    ++P
Sbjct: 226 TLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKP 285

Query: 447 TEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTF 506
           TEVT  S+L ACA   AL+ G +++       +  +  + NAL++MY KCG ++ A   F
Sbjct: 286 TEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIF 345

Query: 507 DKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQT---NCKPNKLTFVGVLSACSNAG 563
           + M  +    WNAM+ G ++HG   E   LF +M+++   + +P+++TF+GVL ACS+ G
Sbjct: 346 NGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKG 405

Query: 564 LLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRAL 623
           L+DK +  F  M + Y I P  +HY CMV LL R G  +EA ++I   PFQ SV++WR L
Sbjct: 406 LVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTL 465

Query: 624 LGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVK 683
           LGAC  Q N +L     + + ++K   DG +VLLSN+YA A RWD V  +R  M    V 
Sbjct: 466 LGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVP 525

Query: 684 KEPGLSWV 691
           ++ G S +
Sbjct: 526 RQAGYSQI 533



 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)

Query: 83  NILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHE 142
           N L+  Y++   +  A ++F  MP  N +S+ ++  GC     +  AL +   +   G +
Sbjct: 225 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 284

Query: 143 VNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYSVCGNVDAARQV 202
                  +I+          +   I+  +    H+ ++++G +L++ Y  CGN+  A ++
Sbjct: 285 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 344

Query: 203 FDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVM---GYRPNNYTITAALKSC 256
           F+G+  K +  W  MV   A + + EE  QLF +M        RP+  T    L +C
Sbjct: 345 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVAC 401


>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:40854327-40856914 | 20130731
          Length = 616

 Score =  259 bits (662), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 250/472 (52%), Gaps = 35/472 (7%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
            I   LK+C         KS+H  ++KA  D D+++GT ++  YAK G + DA+  F+ M
Sbjct: 53  VIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLM 112

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCM----------------RQSSVVPNNFTFA 351
           P+++V+ W+ MI  Y ++  +K AL  F  M                R    +     F 
Sbjct: 113 PERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFD 172

Query: 352 SV---LQACAAQVLLILG------KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
            V   L+      +++ G       +    V ++  + N FV ++++  Y K G++  + 
Sbjct: 173 KVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAE 232

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            +F   P +N   WN+MI GYVQ G GEKA+  F  M  +  +P E T  SVL ACA   
Sbjct: 233 AIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLG 292

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            LD G Q+H +        +  V + LIDMYAKCG + +ARL F+  ++R    WNAMI 
Sbjct: 293 DLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIA 352

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
           G++++G   E L   ++MQ++N + + +TF+ VLSAC++ GL+ +   +   M ++Y IE
Sbjct: 353 GFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKM-EEYGIE 411

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH 642
             I HY CMV LLGR GK  EA +LI  +P +P+  V  A++GAC +  ++ +    A+ 
Sbjct: 412 MGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKM----AEQ 467

Query: 643 VLEMKPHDDGT-----HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
           V++M   D        +VLLSN+YA +++W+    +R +M   G +K PG S
Sbjct: 468 VMKMIGADSAACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYS 519



 Score =  164 bits (415), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 206/429 (48%), Gaps = 31/429 (7%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMD----LPHVCWTIHACVYKRGHQADAFVGT 184
           +L   L L+K+         T I +LL + D    LP+V  ++HA   K G   D F+GT
Sbjct: 32  SLKRALVLYKQTRHDTTHDPTVIPQLLKACDSHPFLPYVK-SLHAESIKAGSDVDVFIGT 90

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM------- 237
           +++ AY+ CG V  AR+VFD +  +++V+W  M+G Y  N   + +L  F +M       
Sbjct: 91  AIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVS 150

Query: 238 ---RVMGYRPNNYTITA---------ALKSCLGLEAFGVGKSVHGCALKA------CYDQ 279
               + G+  N  T+TA          LK  +       G +  G    A        ++
Sbjct: 151 WSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPER 210

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           + +V + ++  Y K GD+++A+  F  +P +++  W+ MIA Y Q+   ++ALE F  M 
Sbjct: 211 NYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMG 270

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
                P+ FT  SVL ACA    L  GKQ+H  +   G+  N FV + L+D+YAKCG++ 
Sbjct: 271 VDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLV 330

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           N+ ++F    E+N   WN MI G+   G   + +     M  ++++   VTF +VL ACA
Sbjct: 331 NARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACA 390

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWN 518
               +   L+V S   +      I     ++D+  + G++ +A     +M  K  E    
Sbjct: 391 HGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLG 450

Query: 519 AMICGYSMH 527
           AMI    +H
Sbjct: 451 AMIGACWIH 459



 Score =  137 bits (345), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 188/406 (46%), Gaps = 27/406 (6%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K LH + +K G+ +D+F    ++  Y +   + DA K+FD MP  N +++  +  G  R+
Sbjct: 71  KSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRN 130

Query: 124 HQFDHALHVILRL-----FKEGHEVNPFV--CTTIIKLLVSMDLPH-----VCWTIHACV 171
                AL     +           +  F     T+        +P+     V WT+    
Sbjct: 131 GDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDG 190

Query: 172 Y-KRGHQADA------------FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
           Y K+G   DA            FV +S++  Y   G+V  A  +F  I  +++  W  M+
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
             Y +N   E++L+ F +M V G+ P+ +T+ + L +C  L     GK +H         
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIA 310

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
            + +V + L+++YAK GD+V+A+L FE   +++V  W+ MIA +A + +  E LE    M
Sbjct: 311 VNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRM 370

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
           ++S++  +  TF +VL ACA   L+    ++ S + + G++  +     ++D+  + G++
Sbjct: 371 QESNIRLDAVTFITVLSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGKL 430

Query: 399 ENSMILFMESP-EQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGND 443
           + +  L    P + NE     MI G   +    K       MIG D
Sbjct: 431 KEAYELIKRMPMKPNETVLGAMI-GACWIHSDMKMAEQVMKMIGAD 475



 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 136/290 (46%), Gaps = 41/290 (14%)

Query: 315 WSLMIARYAQSDRS-KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
           WS  I   + +  S K AL L+   R  +   +      +L+AC +   L   K +H+  
Sbjct: 19  WSHSIRNNSTNQASLKRALVLYKQTRHDTT-HDPTVIPQLLKACDSHPFLPYVKSLHAES 77

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           +K G D +VF+  A++  YAKCG + ++  +F   PE+N VTWN MI GY++ GD + A+
Sbjct: 78  IKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSAL 137

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN-NDIAVANALIDM 492
             F  M G     T V++S ++    GFA     L       K  Y   D+ +   ++D 
Sbjct: 138 LAFEEMPGK----TRVSWSQMI---GGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDG 190

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGY-------------------------SM- 526
           YAK G + DAR  F+ M +R    W++M+CGY                         SM 
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250

Query: 527 -----HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
                +G   +AL  F +M     +P++ T V VLSAC+  G LD G+ +
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQM 300


>Medtr8g087980.1 | PPR containing plant-like protein | HC |
           chr8:36412954-36411351 | 20130731
          Length = 515

 Score =  255 bits (652), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 258/499 (51%), Gaps = 41/499 (8%)

Query: 266 KSVHGCALKACYDQDLYVGTELLELYAKS--GDIVDAQLFFEEMPKKDVIPWSLMIARYA 323
           K +H  A+     +  Y+ + +L  +A S  GD   A+  F  +P  ++  ++ +I  Y 
Sbjct: 5   KQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYT 64

Query: 324 QSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVF 383
            + +  +   +F  M  +++ PN+ TF ++++AC +   L   +Q+ +  +K+G  S+V+
Sbjct: 65  TNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSL---EQVFTLSMKLGNSSDVY 121

Query: 384 VSNALMDVYAK-------------------------------CGEIENSMILFMESPEQN 412
             +++++ ++K                               CG +  +  +F + P +N
Sbjct: 122 FVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRN 181

Query: 413 EVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFS-----SVLRACAGFAALDPG 467
           E +++ M+ GYV+ G   + + LF  +   D     + F+     SVL AC    A + G
Sbjct: 182 EASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEG 241

Query: 468 LQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMICGYSMH 527
             +HS   +     D+ +  ALID Y KCG +  A   F+KM  ++  +W+AMI G +++
Sbjct: 242 KWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAIN 301

Query: 528 GLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIEPCIEH 587
           G +  AL LF KM++   KPN++TFVGVL+AC++  L  +   LF  MS+ YNI P IEH
Sbjct: 302 GNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEH 361

Query: 588 YTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQHVLEMK 647
           Y C+V +L R G+  +A+  I  +  +P   +W +LL  C++  + +LG+   ++++E +
Sbjct: 362 YGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFE 421

Query: 648 PHDDGTHVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLSWVENQGVVHYFSVGDTSH 707
           P   G +VLL+NMYA   +W+ V+ VRK MK +GV    G S++E    +H F   D   
Sbjct: 422 PKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFADDKCC 481

Query: 708 PDNKLICAMLEWLNKKTRD 726
             ++ I  +L  L KK  D
Sbjct: 482 LYSREIYDVLSHLGKKVED 500



 Score =  123 bits (308), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 43/372 (11%)

Query: 98  ASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLFKEGHEVNPFVCTTIIKLLVS 157
           A  LF  +P  N   + ++    + + QF     V  ++       N    TT++K  VS
Sbjct: 41  AETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVS 100

Query: 158 MDLPHVCWTIHACVYKRGHQADAFVGTSLIDAYS-------------------------- 191
           +      +T+     K G+ +D +  +S+I+A+S                          
Sbjct: 101 LSSLEQVFTLSM---KLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSL 157

Query: 192 -----VCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMG----- 241
                 CG V+ AR VFD +  ++  S++ MV  Y  N F+ E +QLF +++        
Sbjct: 158 VSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCAC 217

Query: 242 YRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQ 301
            + N   + + L +C  + AF  GK +H    +   + DL +GT L++ Y K G +  A+
Sbjct: 218 LKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAE 277

Query: 302 LFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAAQV 361
             F +MP KDV  WS MI   A +  +K ALELF  M +    PN  TF  VL AC  + 
Sbjct: 278 KVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKS 337

Query: 362 LLILGKQIHSNVL-KVGLDSNVFVSNALMDVYAKCGEIENSMILFMESP--EQNEVTWNT 418
           L     ++   +  K  +  ++     ++DV A+ G+++ ++  F+ S   E +   W +
Sbjct: 338 LFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALT-FINSMHIEPDGAIWGS 396

Query: 419 MIVGYVQLGDGE 430
           ++ G +  G  E
Sbjct: 397 LLNGCLMHGHYE 408



 Score =  118 bits (295), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 171/376 (45%), Gaps = 37/376 (9%)

Query: 189 AYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRVMGYRPNNYT 248
           A S  G+   A  +F  I   ++  +  ++  Y  N  + +   +F +M     RPN++T
Sbjct: 31  ALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHT 90

Query: 249 ITAALKSCLGLE--------------------------AFGVGKSVHGC--ALKACYDQD 280
            T  +K+C+ L                           AF    ++H        C +++
Sbjct: 91  FTTLVKACVSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRN 150

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
           +   T L+  Y   G + +A+  F++MP ++   +S M++ Y ++    E ++LF  +++
Sbjct: 151 VVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKK 210

Query: 341 SS-----VVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC 395
                  +  N     SVL AC        GK IHS V + GL+ ++ +  AL+D Y KC
Sbjct: 211 KDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKC 270

Query: 396 GEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVL 455
           G ++ +  +F + P ++  TW+ MI+G    G+ + A+ LF  M     +P EVTF  VL
Sbjct: 271 GWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVL 330

Query: 456 RACAGFAALDPGLQVHSLTIKTRYNNDIAVAN--ALIDMYAKCGRINDARLTFDKMDKRE 513
            AC   +      ++  + +  +YN   ++ +   ++D+ A+ G++  A    + M    
Sbjct: 331 TACNHKSLFGESARLFGI-MSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEP 389

Query: 514 EVS-WNAMICGYSMHG 528
           + + W +++ G  MHG
Sbjct: 390 DGAIWGSLLNGCLMHG 405


>Medtr6g018720.1 | PPR containing plant-like protein | HC |
           chr6:7213956-7209580 | 20130731
          Length = 535

 Score =  253 bits (646), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 155/472 (32%), Positives = 249/472 (52%), Gaps = 35/472 (7%)

Query: 248 TITAALKSCLGLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVDAQLFFEEM 307
            I   LK+C         KS+H  ++KA  D D+++GT ++  YAK G + DA+  F+ M
Sbjct: 53  VIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLM 112

Query: 308 PKKDVIPWSLMIARYAQSDRSKEALELFHCM----------------RQSSVVPNNFTFA 351
            +++ + W+ MI  Y ++  +K AL  F  M                R    +     F 
Sbjct: 113 HERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFD 172

Query: 352 SV---LQACAAQVLLILG------KQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIENSM 402
            V   L+      +++ G       +    V ++  + N FV ++++  Y K G++  + 
Sbjct: 173 KVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAE 232

Query: 403 ILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACAGFA 462
            +F   P +N   WN+MI GYVQ G GEKA+  F  M  +  +P E T  SVL ACA   
Sbjct: 233 AIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLG 292

Query: 463 ALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMDKREEVSWNAMIC 522
            LD G Q+H +        +  V + LIDMYAKCG + +ARL F+  ++R    WNAMI 
Sbjct: 293 DLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIA 352

Query: 523 GYSMHGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSLFKSMSQDYNIE 582
           G++++G   E L   ++M+++N +P+ +TF+ VLSAC++ GL+ +   +   M ++Y IE
Sbjct: 353 GFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKM-EEYGIE 411

Query: 583 PCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQPSVMVWRALLGACVVQKNIDLGRFCAQH 642
             I HY CMV LLGR G+  EA +LI  +P +P+  V  A++GAC +  ++ +    A+ 
Sbjct: 412 MGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKM----AEQ 467

Query: 643 VLEMKPHDDGT-----HVLLSNMYAVAKRWDNVASVRKNMKRKGVKKEPGLS 689
           V++M   D        +VLLSN+YA +++W+    +R +M   G +K PG S
Sbjct: 468 VMKMIGVDSAACVNSHNVLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCS 519



 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 206/429 (48%), Gaps = 31/429 (7%)

Query: 129 ALHVILRLFKEGHEVNPFVCTTIIKLLVSMD----LPHVCWTIHACVYKRGHQADAFVGT 184
           +L   L L+K+         T I +LL + D    LP+V  ++HA   K G   D F+GT
Sbjct: 32  SLKRALVLYKQTRHDTTHDPTVIPQLLKACDSHPFLPYVK-SLHAESIKAGSDVDVFIGT 90

Query: 185 SLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQM------- 237
           +++ AY+ CG V  AR+VFD +  ++ V+W  M+G Y  N   + +L  F +M       
Sbjct: 91  AIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVS 150

Query: 238 ---RVMGYRPNNYTITA---------ALKSCLGLEAFGVGKSVHGCALKA------CYDQ 279
               + G+  N  T+TA          LK  +       G +  G    A        ++
Sbjct: 151 WSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELMPER 210

Query: 280 DLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMR 339
           + +V + ++  Y K GD+++A+  F  +P +++  W+ MIA Y Q+   ++ALE F  M 
Sbjct: 211 NYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMG 270

Query: 340 QSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEIE 399
                P+ FT  SVL ACA    L  GKQ+H  +   G+  N FV + L+D+YAKCG++ 
Sbjct: 271 VDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLV 330

Query: 400 NSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAMNLFSSMIGNDMQPTEVTFSSVLRACA 459
           N+ ++F    E+N   WN MI G+   G   + +     M  ++++P  VTF +VL ACA
Sbjct: 331 NARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACA 390

Query: 460 GFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCGRINDARLTFDKMD-KREEVSWN 518
               +   L+V S   +      I     ++D+  + GR+ +A     +M  K  E    
Sbjct: 391 HGGLVSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLG 450

Query: 519 AMICGYSMH 527
           AMI    +H
Sbjct: 451 AMIGACWIH 459



 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 180/383 (46%), Gaps = 26/383 (6%)

Query: 64  KQLHCDILKRGAPLDLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRS 123
           K LH + +K G+ +D+F    ++  Y +   + DA K+FD M   N +++  +  G  R+
Sbjct: 71  KSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRN 130

Query: 124 HQFDHALHVILRLFKE-----GHEVNPFV--CTTIIKLLVSMDLPH-----VCWTIHACV 171
                AL     +  +        +  F     T+        +P+     V WT+    
Sbjct: 131 GDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDG 190

Query: 172 Y-KRGHQADA------------FVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMV 218
           Y K+G   DA            FV +S++  Y   G+V  A  +F  I  +++  W  M+
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250

Query: 219 GCYAENCFYEESLQLFCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYD 278
             Y +N   E++L+ F +M V G+ P+ +T+ + L +C  L     GK +H         
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIA 310

Query: 279 QDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCM 338
            + +V + L+++YAK GD+V+A+L FE   +++V  W+ MIA +A + +  E LE    M
Sbjct: 311 VNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRM 370

Query: 339 RQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKCGEI 398
            +S++ P+  TF +VL ACA   L+    ++ S + + G++  +     ++D+  + G +
Sbjct: 371 EESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGRL 430

Query: 399 ENSMILFMESP-EQNEVTWNTMI 420
           + +  L    P + NE     MI
Sbjct: 431 KEAYELIKRMPMKPNETVLGAMI 453



 Score =  123 bits (308), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 41/290 (14%)

Query: 315 WSLMIARYAQSDRS-KEALELFHCMRQSSVVPNNFTFASVLQACAAQVLLILGKQIHSNV 373
           WS  I   + +  S K AL L+   R  +   +      +L+AC +   L   K +H+  
Sbjct: 19  WSHSIRNNSTNQASLKRALVLYKQTRHDTT-HDPTVIPQLLKACDSHPFLPYVKSLHAES 77

Query: 374 LKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEKAM 433
           +K G D +VF+  A++  YAKCG + ++  +F    E+N+VTWN MI GY++ GD + A+
Sbjct: 78  IKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSAL 137

Query: 434 NLFSSMIGNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYN-NDIAVANALIDM 492
             F  M G     T V++S ++    GFA     L       K  Y   D+ +   ++D 
Sbjct: 138 LAFEEMPGK----TRVSWSQMI---GGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDG 190

Query: 493 YAKCGRINDARLTFDKMDKREEVSWNAMICGY-------------------------SM- 526
           YAK G + DAR  F+ M +R    W++M+CGY                         SM 
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250

Query: 527 -----HGLSTEALNLFNKMQQTNCKPNKLTFVGVLSACSNAGLLDKGQSL 571
                +G   +AL  F +M     +P++ T V VLSAC+  G LD G+ +
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQM 300


>Medtr6g059820.1 | PPR containing plant-like protein | HC |
           chr6:20520961-20518530 | 20130731
          Length = 528

 Score =  252 bits (644), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 241/465 (51%), Gaps = 49/465 (10%)

Query: 300 AQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACAA 359
           A   F  +   ++  ++ +I  +  S +     +LF  M  S++ PNNF +  VL++   
Sbjct: 58  AHQIFNHIHSPNIYLFTAIITAF--SSQQHTTFKLFKTMLNSNIRPNNFIYPHVLKSVKE 115

Query: 360 QVLLILGKQIHSNVLKVGLDSNVFVSNALMDVYAKC-GEIENSMILFMESPEQNEVTWNT 418
           + L+ L   +H+ ++K G  +   V  +L+D Y+K  G + ++  +F E  E+N V +  
Sbjct: 116 RFLVDL---VHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTV 172

Query: 419 MIVGYVQLGDGEKAMNLFSSMIGNDM---------------------------------- 444
           ++ GY+++GD EK + +F  M+  D+                                  
Sbjct: 173 LVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGE 232

Query: 445 -------QPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTRYNNDIAVANALIDMYAKCG 497
                  +P +VT   VL AC     L  G  +H    +  +  D  V+NAL+DMY KCG
Sbjct: 233 GGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCG 292

Query: 498 RINDARLTFDKMDKREEVSWNAMICGYSMHGLSTEALNLFNKMQQ--TNCKPNKLTFVGV 555
            +  AR  F+   ++   SWN+MI  Y++HG   +A+  F KM +     +P+++TF+G+
Sbjct: 293 SLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGL 352

Query: 556 LSACSNAGLLDKGQSLFKSMSQDYNIEPCIEHYTCMVGLLGRLGKFDEAVKLIGEIPFQP 615
           L+AC++ GL+++G   F+ M ++Y IEP I HY C++ LLGR G+FDEA+ ++  +  +P
Sbjct: 353 LNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEP 412

Query: 616 SVMVWRALLGACVVQKNIDLGRFCAQHVLEMKPHDDGTHVLLSNMYAVAKRWDNVASVRK 675
             +VW +LL  C V    DL  F A+ ++E+ PH+ G   +L+N+Y    +WD + +V  
Sbjct: 413 DEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWS 472

Query: 676 NMKRKGVKKEPGLSWVENQGVVHYFSVGDTSHPDNKLICAMLEWL 720
            +K++   K PG SW+E    VH F   D S+P  + +  +LE L
Sbjct: 473 KLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517



 Score =  131 bits (329), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 174/401 (43%), Gaps = 52/401 (12%)

Query: 175 GHQADAFVGTSLIDAYSV-CGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQL 233
           GH    F    LI   S+   N+  A Q+F+ I   ++  +T ++  ++       + +L
Sbjct: 33  GHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHIHSPNIYLFTAIITAFSSQ--QHTTFKL 90

Query: 234 FCQMRVMGYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACY---------------- 277
           F  M     RPNN+     LKS    E F V   VH   +K  +                
Sbjct: 91  FKTMLNSNIRPNNFIYPHVLKSVK--ERFLV-DLVHAQIVKCGFLNYPVVETSLVDSYSK 147

Query: 278 ----------------DQDLYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIAR 321
                           ++++ V T L+  Y + GD+    + F+EM  +DV  W+ +I+ 
Sbjct: 148 VLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISG 207

Query: 322 YAQSDRSKEALELFHCMRQSSVV----------PNNFTFASVLQACAAQVLLILGKQIHS 371
             Q+    E + LF  M  ++ +          PN  T   VL AC    +L LGK IH 
Sbjct: 208 CTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHG 267

Query: 372 NVLKVGLDSNVFVSNALMDVYAKCGEIENSMILFMESPEQNEVTWNTMIVGYVQLGDGEK 431
            V + G   + FVSNAL+D+Y KCG +E +  +F     +   +WN+MI  Y   G  E 
Sbjct: 268 YVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCED 327

Query: 432 AMNLFSSMI--GNDMQPTEVTFSSVLRACAGFAALDPGLQVHSLTIKTR-YNNDIAVANA 488
           A+  F  M+  G  ++P EVTF  +L AC     ++ G     + IK       IA    
Sbjct: 328 AITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGC 387

Query: 489 LIDMYAKCGRINDARLTFDKMD-KREEVSWNAMICGYSMHG 528
           LID+  + G+ ++A      M  + +EV W +++ G  +HG
Sbjct: 388 LIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHG 428



 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 14/266 (5%)

Query: 171 VYKRGHQADAFVGTSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEES 230
           V+    + +  V T L+  Y   G+V+    VFD +  +D+ +W  ++    +N F+ E 
Sbjct: 158 VFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEG 217

Query: 231 LQLFCQMRVM----------GYRPNNYTITAALKSCLGLEAFGVGKSVHGCALKACYDQD 280
           ++LF +M             G +PN  T+   L +C       +GK +HG   +  +  D
Sbjct: 218 IRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVD 277

Query: 281 LYVGTELLELYAKSGDIVDAQLFFEEMPKKDVIPWSLMIARYAQSDRSKEALELFHCMRQ 340
            +V   L+++Y K G +  A+  FE   +K +  W+ MI  YA   + ++A+  F  M +
Sbjct: 278 SFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVE 337

Query: 341 --SSVVPNNFTFASVLQACAAQVLLILGKQIHSNVLK-VGLDSNVFVSNALMDVYAKCGE 397
               V P+  TF  +L AC    L+  G      ++K  G++  +     L+D+  + G+
Sbjct: 338 CGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQ 397

Query: 398 IENSM-ILFMESPEQNEVTWNTMIVG 422
            + +M ++   S E +EV W +++ G
Sbjct: 398 FDEAMDVVKGMSMEPDEVVWGSLLNG 423



 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 26/303 (8%)

Query: 78  DLFAHNILLNFYVQFDCLDDASKLFDEMPLTNTISFVTLAQGCSRSHQFDHALHVILRLF 137
           ++    +L++ Y++   ++    +FDEM   +  ++  +  GC+++  F   +    RLF
Sbjct: 166 NIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGI----RLF 221

Query: 138 KE--------------GHEVNPFVCTTIIKLLVSMDLPHVCWTIHACVYKRGHQADAFVG 183
           +E              G++ N      ++       +  +   IH  VY+ G   D+FV 
Sbjct: 222 REMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVS 281

Query: 184 TSLIDAYSVCGNVDAARQVFDGIFCKDMVSWTGMVGCYAENCFYEESLQLFCQMRV--MG 241
            +L+D Y  CG+++ AR+VF+    K + SW  M+ CYA +   E+++  F +M     G
Sbjct: 282 NALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGG 341

Query: 242 YRPNNYTITAALKSCL--GLEAFGVGKSVHGCALKACYDQDLYVGTELLELYAKSGDIVD 299
            RP+  T    L +C   GL   G G             Q  + G  L++L  ++G   +
Sbjct: 342 VRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGC-LIDLLGRAGQFDE 400

Query: 300 AQLFFEEMP-KKDVIPWSLMIARYAQSDRSKEALELFHCMRQSSVVPNNFTFASVLQACA 358
           A    + M  + D + W  ++       R+   L  F   +   + P+N  + ++L    
Sbjct: 401 AMDVVKGMSMEPDEVVWGSLLNGCKVHGRTD--LAEFAAKKLVEIDPHNGGYGTMLANIY 458

Query: 359 AQV 361
            Q+
Sbjct: 459 GQL 461