Miyakogusa Predicted Gene

Lj0g3v0125429.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125429.1 Non Characterized Hit- tr|D7KKK6|D7KKK6_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,46.9,5e-19,
,CUFF.7516.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g006785.1 | protein prenyltransferase alpha subunit repeat...   188   1e-48

>Medtr8g006785.1 | protein prenyltransferase alpha subunit repeat
           protein | HC | chr8:962970-969737 | 20130731
          Length = 465

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 100/126 (79%)

Query: 1   MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
           MSEE    G A DLLHQLEDILESDALIDELGFIHPSQFS+LNEESG+S NLSDE IHQS
Sbjct: 1   MSEESSLYGKATDLLHQLEDILESDALIDELGFIHPSQFSLLNEESGISGNLSDETIHQS 60

Query: 61  TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
            + + SS   SKQE  YFWNRDHKLGIST  ++ LY+AAKH+FMT   QY+ CG QSDKV
Sbjct: 61  ADRIASSNEYSKQEKRYFWNRDHKLGISTDVLLLLYKAAKHSFMTAFKQYKMCGNQSDKV 120

Query: 121 VSCLPA 126
             CLPA
Sbjct: 121 GRCLPA 126